Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0007884

Physical Location & Seq

Genomic Coordinates Forward (+)

498829 .. 502549

Gene Structure 3721 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1008100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1182 bp

ATGGCAACCTATACAGGAAAAGGAGCCCCCTCAAATGGGTCTGTTTATGTTTGCAATCTGCCTGAGGGAACTGATGAAAATATGTTGGCTGAACATTTTGGCACCATTGGGTTGTTAAAGAAAGACAAGCGAACAGGTCGACCGAAAATTTGGCTATACCGAGACAAATTGACCAACGAGCCTAAGGGAGATGCTACTGTAACGTATGAAGATCCACATGCTGCATCAGCTGCCGTTGAATGGTTTAACAACAAGGAATTCCATGGTAATACCATTGGGGTTTTTATAGCCGAGTCCAAAAGCAAAGATGATCAGACTCATAACTCTGTGGTTGATCCAAGTTTTGGCGGTGATCTTGATGGACCAGAGGAAGCTGCTCAGGATACGAATGGGGGTGGTGGTGGTCGAGGTCGAGGTGATTCTACTGGGAAAGCATGGCAACAAGAAGGAGACTGGACGTGTCCAAATACAAGCTGTGCCAATGTGAATTTTGCATTTCGTGGTGTGTGCAATCGCTGTGGAAGTGCTCGACCAACTGGAGCTTCTGGTGGCGCAGGGAGTGGTGGTCGTGGTAGGGGTCGTGGCGTTGATGCTGGGGGCCGTGGTGGTCCTGTTGGTGCTCCTACAGGTGGACTCTTTGGTCCAAATGACTGGCCGTGTCCAATGTGTGCCAACATCAATTGGGCAAAGCGTACAAAATGCAATATATGCAACACAAATAAACCAGGTCACAATGAAGGGGGTGTAAGGGGGGGACGTGGTGGTGGTTACAAGGAACTTGATGAAGAAGAATTAGAGGAAATCAAGCGACGTCGGCGGGAGGCAGAAGAAGATGATGGAGAGATGTATGATGAGTTTGGCAACCTCAAGAAAAAATTTCGCGCTAAAACACAGCTAGAAGAAACTGGACGAGCTCTTCCAGGTGCAGGACGTGCTGGATGGGAAGTGGAGGAAATAGGTGGCAGAGAGAGAAATAGAGAGAGGGGAAGGGAACACGATGATAGACCGAGCAGCAAGAACAGAGACAGAGATGATGGTTATAGGCGTCGAAGTCGAAGTAGAGAAAGGGAAAGGGATAGGGGGAGAGATAGACCTCGAGACCATGATTATGATCGAGAAAAAGAATACGGGAGGGAGAGGGAGAGGGATCGAGACCGGGACCGGCACAGGCACCGTTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006366 GO:0006367 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0023051 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:1901796 GO:1902531 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03022 ko05202 map03022 map05202

Pfam Domains

Protein Families

RRM_1 zf-RanBP

Protein Analysis

394

Amino Acids

43.62

Weight (kDa)

8.29

Isoelectric Point (pI)

36.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	15 - 92	3.2e-09	RNA recognition motif
Zn_ribbon_RanBP	PF00641	149 - 178	1e-05	Zn-finger in Ran binding protein and others

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007884)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50300 AT1G50300
fragaria_vesca	FvH4_4g36691 FvH4_4g36691
malus_domestica	MD13G1008100.v1.1 MD16G1000100.v1.1
prunus_persica	Prupe.1G345000_v2.0.a1 Prupe.1G345000_v2.0.a1 Prupe.1G345000_v2.0.a1 Prupe.1G345000_v2.0.a1 Prupe.1G345000_v2.0.a1 Prupe.1G345000_v2.0.a1 Prupe.1G345000_v2.0.a1 Prupe.1G345000_v2.0.a1
pyrus_communis	pycom13g00660 pycom16g00530
rosa_chinensis	RchiOBHm_Chr4g0446411
rosa_laevigata	RLG00000005663
rosa_multiflora	Rmu_sc0037453.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386850
rosa_samantha	Rh4AG432700 Rh4CG459200 Rh4DG440600
rosa_wichuraiana	Rw4G036960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	639
AatII	GACGTC	1 cut(s)	814
AccB1I	GGYRCC	2 cut(s)	101, 1170
AccB7I	CCANNNNNTGG	1 cut(s)	344
AccI	GTMKAC	1 cut(s)	139
AccII	CGCG	1 cut(s)	882
AciI	CCGC	2 cut(s)	348, 817
AclWI	GGATC	3 cut(s)	206, 329, 1155
AcoI	YGGCCR	1 cut(s)	653
AcsI	RAATTY	4 cut(s)	147, 257, 487, 875
AcyI	GRCGYC	2 cut(s)	811, 1045
AfaI	GTAC	1 cut(s)	694
AfiI	CCNNNNNNNGG	6 cut(s)	35, 36, 240, 344, 629, 926
AflIII	ACRYGT	1 cut(s)	458
AgsI	TTSAA	1 cut(s)	239
AjiI	CACGTC	3 cut(s)	459, 758, 932
AjnI	CCWGG	2 cut(s)	724, 919
AjuI	GAANNNNNNNTTGG	2 cut(s)	526, 558
AluBI	AGCT	6 cut(s)	230, 374, 474, 542, 895, 914
AluI	AGCT	6 cut(s)	230, 374, 474, 542, 895, 914
Alw21I	GWGCWC	3 cut(s)	529, 622, 916
Alw26I	GTCTC	5 cut(s)	156, 444, 1017, 1092, 1146
AlwI	GGATC	3 cut(s)	206, 329, 1155
Ama87I	CYCGRG	1 cut(s)	1095
AoxI	GGCC	2 cut(s)	598, 653
ApeKI	GCWGC	4 cut(s)	221, 230, 374, 1011
ApoI	RAATTY	4 cut(s)	147, 257, 487, 875
ArsI	GACNNNNNNTTYG	2 cut(s)	132, 164
AspLEI	GCGC	2 cut(s)	554, 884
AspS9I	GGNCC	5 cut(s)	362, 598, 608, 641, 1159
AsuC2I	CCSGG	1 cut(s)	1157
AsuHPI	GGTGA	2 cut(s)	362, 428
AvaI	CYCGRG	1 cut(s)	1095
AvaII	GGWCC	4 cut(s)	362, 608, 641, 1159
AxyI	CCTNAGG	2 cut(s)	63, 183
BanI	GGYRCC	2 cut(s)	101, 1170
BanII	GRGCYC	2 cut(s)	28, 916
Bbv12I	GWGCWC	3 cut(s)	529, 622, 916
BbvI	GCAGC	4 cut(s)	208, 217, 361, 1023
BccI	CCATC	4 cut(s)	353, 830, 933, 1028
BceAI	ACGGC	3 cut(s)	218, 585, 640
BciT130I	CCWGG	2 cut(s)	726, 921
BciVI	GTATCC	1 cut(s)	376
BclI	TGATCA	1 cut(s)	310
BcnI	CCSGG	1 cut(s)	1157
BcoDI	GTCTC	5 cut(s)	156, 444, 1017, 1092, 1146
BfaI	CTAG	1 cut(s)	896
BfmI	CTRYAG	1 cut(s)	624
BfuI	GTATCC	1 cut(s)	376
BisI	GCNGC	4 cut(s)	222, 231, 375, 1012
BlsI	GCNGC	4 cut(s)	223, 232, 376, 1013
Bme1390I	CCNGG	3 cut(s)	726, 921, 1157
Bme18I	GGWCC	4 cut(s)	362, 608, 641, 1159
BmeT110I	CYCGRG	1 cut(s)	1095
BmgBI	CACGTC	3 cut(s)	459, 758, 932
BmgT120I	GGNCC	5 cut(s)	362, 598, 608, 641, 1159
BmiI	GGNNCC	5 cut(s)	25, 103, 599, 1160, 1172
BmrFI	CCNGG	3 cut(s)	726, 921, 1157
BmrI	ACTGGG	1 cut(s)	435
BmsI	GCATC	3 cut(s)	181, 233, 580
BmuI	ACTGGG	1 cut(s)	435
BpmI	CTGGAG	1 cut(s)	558
Bpu10I	CCTNAGC	1 cut(s)	378
BpuEI	CTTGAG	1 cut(s)	851
BpuMI	CCSGG	1 cut(s)	1157
BsaBI	GATNNNNATC	1 cut(s)	1110
BsaHI	GRCGYC	2 cut(s)	811, 1045
BsaI	GGTCTC	2 cut(s)	1092, 1146
BsaJI	CCNNGG	2 cut(s)	262, 601
BsaXI	ACNNNNNCTCC	2 cut(s)	550, 580
Bsc4I	CCNNNNNNNGG	6 cut(s)	35, 36, 240, 344, 629, 926
Bse118I	RCCGGY	1 cut(s)	1161
Bse1I	ACTGG	5 cut(s)	430, 458, 541, 656, 910
Bse21I	CCTNAGG	2 cut(s)	63, 183
Bse8I	GATNNNNATC	1 cut(s)	1110
BseBI	CCWGG	2 cut(s)	726, 921
BseDI	CCNNGG	2 cut(s)	262, 601
BseGI	GGATG	1 cut(s)	944
BseJI	GATNNNNATC	1 cut(s)	1110
BseLI	CCNNNNNNNGG	6 cut(s)	35, 36, 240, 344, 629, 926
BseMII	CTCAG	2 cut(s)	54, 392
BseNI	ACTGG	5 cut(s)	430, 458, 541, 656, 910
BseXI	GCAGC	4 cut(s)	208, 217, 361, 1023
BseYI	CCCAGC	1 cut(s)	593
BsgI	GTGCAG	1 cut(s)	945
Bsh1236I	CGCG	1 cut(s)	882
Bsh1285I	CGRYCG	1 cut(s)	143
BshFI	GGCC	2 cut(s)	600, 655
BshNI	GGYRCC	2 cut(s)	101, 1170
BsiEI	CGRYCG	1 cut(s)	143
BsiHKAI	GWGCWC	3 cut(s)	529, 622, 916
BsiHKCI	CYCGRG	1 cut(s)	1095
BsiSI	CCGG	2 cut(s)	1156, 1162
BslFI	GGGAC	2 cut(s)	768, 1172
BslI	CCNNNNNNNGG	6 cut(s)	35, 36, 240, 344, 629, 926
BsmAI	GTCTC	5 cut(s)	156, 444, 1017, 1092, 1146
BsmFI	GGGAC	2 cut(s)	768, 1172
BsnI	GGCC	2 cut(s)	600, 655
Bso31I	GGTCTC	2 cut(s)	1092, 1146
BsoBI	CYCGRG	1 cut(s)	1095
Bsp1286I	GDGCHC	4 cut(s)	28, 529, 622, 916
Bsp143I	GATC	6 cut(s)	211, 310, 334, 352, 1111, 1147
Bsp19I	CCATGG	1 cut(s)	262
BspACI	CCGC	2 cut(s)	348, 817
BspANI	GGCC	2 cut(s)	600, 655
BspCNI	CTCAG	2 cut(s)	55, 391
BspFNI	CGCG	1 cut(s)	882
BspLI	GGNNCC	5 cut(s)	25, 103, 599, 1160, 1172
BspPI	GGATC	3 cut(s)	206, 329, 1155
BspQI	GCTCTTC	1 cut(s)	921
BspT107I	GGYRCC	2 cut(s)	101, 1170
BspTNI	GGTCTC	2 cut(s)	1092, 1146
BsrFI	RCCGGY	1 cut(s)	1161
BsrI	ACTGG	5 cut(s)	430, 458, 541, 656, 910
BssAI	RCCGGY	1 cut(s)	1161
BssECI	CCNNGG	2 cut(s)	262, 601
BssMI	GATC	6 cut(s)	211, 310, 334, 352, 1111, 1147
BssNI	GRCGYC	2 cut(s)	811, 1045
BssT1I	CCWWGG	1 cut(s)	262
Bst2UI	CCWGG	2 cut(s)	726, 921
Bst4CI	ACNGT	2 cut(s)	199, 1175
Bst6I	CTCTTC	1 cut(s)	921
BstACI	GRCGYC	2 cut(s)	811, 1045
BstAPI	GCANNNNNTGC	3 cut(s)	230, 708, 932
BstDEI	CTNAG	3 cut(s)	63, 183, 378
BstDSI	CCRYGG	2 cut(s)	262, 601
BstF5I	GGATG	1 cut(s)	944
BstFNI	CGCG	1 cut(s)	882
BstHHI	GCGC	2 cut(s)	554, 884
BstKTI	GATC	6 cut(s)	214, 313, 337, 355, 1114, 1150
BstMAI	GTCTC	5 cut(s)	156, 444, 1017, 1092, 1146
BstMBI	GATC	6 cut(s)	211, 310, 334, 352, 1111, 1147
BstMCI	CGRYCG	1 cut(s)	143
BstMWI	GCNNNNNNNGC	5 cut(s)	227, 230, 708, 814, 932
BstNI	CCWGG	2 cut(s)	726, 921
BstNSI	RCATGY	1 cut(s)	221
BstSCI	CCNGG	3 cut(s)	724, 919, 1155
BstSFI	CTRYAG	1 cut(s)	624
BstUI	CGCG	1 cut(s)	882
BstV1I	GCAGC	4 cut(s)	208, 217, 361, 1023
BstX2I	RGATCY	1 cut(s)	211
BstXI	CCANNNNNNTGG	1 cut(s)	651
BstYI	RGATCY	1 cut(s)	211
Bsu36I	CCTNAGG	2 cut(s)	63, 183
BsuI	GTATCC	1 cut(s)	376
BsuRI	GGCC	2 cut(s)	600, 655
BtgI	CCRYGG	2 cut(s)	262, 601
BtrI	CACGTC	3 cut(s)	459, 758, 932
BtsCI	GGATG	1 cut(s)	944
CfoI	GCGC	2 cut(s)	554, 884
Cfr10I	RCCGGY	1 cut(s)	1161
Cfr13I	GGNCC	5 cut(s)	362, 598, 608, 641, 1159
CseI	GACGC	1 cut(s)	1034
CsiI	ACCWGGT	1 cut(s)	724
Csp6I	GTAC	1 cut(s)	693
CspCI	CAANNNNNGTGG	2 cut(s)	499, 534
CviAII	CATG	4 cut(s)	218, 263, 435, 1103
CviQI	GTAC	1 cut(s)	693
DdeI	CTNAG	3 cut(s)	63, 183, 378
DpnI	GATC	6 cut(s)	213, 312, 336, 354, 1113, 1149
DpnII	GATC	6 cut(s)	211, 310, 334, 352, 1111, 1147
DrdI	GACNNNNNNGTC	1 cut(s)	639
DseDI	GACNNNNNNGTC	1 cut(s)	639
EaeI	YGGCCR	1 cut(s)	653
Eam1104I	CTCTTC	1 cut(s)	921
EarI	CTCTTC	1 cut(s)	921
Ecl136II	GAGCTC	1 cut(s)	914
Eco130I	CCWWGG	1 cut(s)	262
Eco24I	GRGCYC	2 cut(s)	28, 916
Eco31I	GGTCTC	2 cut(s)	1092, 1146
Eco47I	GGWCC	4 cut(s)	362, 608, 641, 1159
Eco53kI	GAGCTC	1 cut(s)	914
Eco81I	CCTNAGG	2 cut(s)	63, 183
Eco88I	CYCGRG	1 cut(s)	1095
EcoICRI	GAGCTC	1 cut(s)	914
EcoRI	GAATTC	1 cut(s)	257
EcoRII	CCWGG	2 cut(s)	724, 919
EcoT14I	CCWWGG	1 cut(s)	262
EcoT38I	GRGCYC	2 cut(s)	28, 916
ErhI	CCWWGG	1 cut(s)	262
FaeI	CATG	4 cut(s)	221, 266, 438, 1106
FaqI	GGGAC	2 cut(s)	768, 1172
FatI	CATG	4 cut(s)	217, 262, 434, 1102
FauI	CCCGC	1 cut(s)	810
FbaI	TGATCA	1 cut(s)	310
FblI	GTMKAC	1 cut(s)	139
Fnu4HI	GCNGC	4 cut(s)	222, 231, 375, 1012
FokI	GGATG	1 cut(s)	951
FriOI	GRGCYC	2 cut(s)	28, 916
Fsp4HI	GCNGC	4 cut(s)	222, 231, 375, 1012
FspBI	CTAG	1 cut(s)	896
GlaI	GCGC	2 cut(s)	553, 883
GluI	GCNGC	4 cut(s)	222, 231, 375, 1012
GsaI	CCCAGC	1 cut(s)	597
GsuI	CTGGAG	1 cut(s)	558
HaeIII	GGCC	2 cut(s)	600, 655
HapII	CCGG	2 cut(s)	1156, 1162
HgaI	GACGC	1 cut(s)	1034
HhaI	GCGC	2 cut(s)	554, 884
Hin1I	GRCGYC	2 cut(s)	811, 1045
Hin1II	CATG	4 cut(s)	221, 266, 438, 1106
Hin6I	GCGC	2 cut(s)	552, 882
HinP1I	GCGC	2 cut(s)	552, 882
HincII	GTYRAC	1 cut(s)	140
HindII	GTYRAC	1 cut(s)	140
HinfI	GANTC	4 cut(s)	293, 316, 419, 633
HpaII	CCGG	2 cut(s)	1156, 1162
HphI	GGTGA	2 cut(s)	362, 428
Hpy166II	GTNNAC	2 cut(s)	140, 632
Hpy188I	TCNGA	1 cut(s)	315
Hpy188III	TCNNGA	6 cut(s)	356, 380, 868, 1097, 1115, 1151
Hpy8I	GTNNAC	2 cut(s)	140, 632
Hpy99I	CGWCG	3 cut(s)	813, 816, 1050
HpyAV	CCTTC	3 cut(s)	440, 731, 981
HpyCH4III	ACNGT	2 cut(s)	199, 1175
HpyCH4IV	ACGT	5 cut(s)	203, 458, 757, 811, 931
HpyCH4V	TGCA	7 cut(s)	54, 224, 494, 510, 702, 711, 926
HpyF10VI	GCNNNNNNNGC	5 cut(s)	227, 230, 708, 814, 932
HpyF3I	CTNAG	3 cut(s)	63, 183, 378
HpySE526I	ACGT	5 cut(s)	203, 458, 757, 811, 931
Hsp92I	GRCGYC	2 cut(s)	811, 1045
Hsp92II	CATG	4 cut(s)	221, 266, 438, 1106
HspAI	GCGC	2 cut(s)	552, 882
Ksp22I	TGATCA	1 cut(s)	310
Kzo9I	GATC	6 cut(s)	211, 310, 334, 352, 1111, 1147
LguI	GCTCTTC	1 cut(s)	921
LmnI	GCTCC	3 cut(s)	23, 539, 625
Lsp1109I	GCAGC	4 cut(s)	208, 217, 361, 1023
LweI	GCATC	3 cut(s)	181, 233, 580
MabI	ACCWGGT	1 cut(s)	724
MaeI	CTAG	1 cut(s)	896
MaeII	ACGT	5 cut(s)	203, 458, 757, 811, 931
MaeIII	GTNAC	3 cut(s)	199, 728, 767
MalI	GATC	6 cut(s)	213, 312, 336, 354, 1113, 1149
MboI	GATC	6 cut(s)	211, 310, 334, 352, 1111, 1147
MboII	GAAGA	7 cut(s)	221, 797, 800, 839, 842, 908, 911
MfeI	CAATTG	1 cut(s)	679
MflI	RGATCY	1 cut(s)	211
MhlI	GDGCHC	4 cut(s)	28, 529, 622, 916
MluCI	AATT	7 cut(s)	147, 167, 257, 487, 679, 791, 875
MlyI	GAGTC	3 cut(s)	302, 310, 627
MseI	TTAA	2 cut(s)	116, 246
MslI	CAYNNNNRTG	1 cut(s)	1107
MspA1I	CMGCKG	1 cut(s)	230
MspI	CCGG	2 cut(s)	1156, 1162
MspR9I	CCNGG	3 cut(s)	726, 921, 1157
MunI	CAATTG	1 cut(s)	679
MvaI	CCWGG	2 cut(s)	726, 921
MvnI	CGCG	1 cut(s)	882
MwoI	GCNNNNNNNGC	5 cut(s)	227, 230, 708, 814, 932
NciI	CCSGG	1 cut(s)	1157
NcoI	CCATGG	1 cut(s)	262
NdeII	GATC	6 cut(s)	211, 310, 334, 352, 1111, 1147
NlaIII	CATG	4 cut(s)	221, 266, 438, 1106
NlaIV	GGNNCC	5 cut(s)	25, 103, 599, 1160, 1172
NmeAIII	GCCGAG	1 cut(s)	316
NmuCI	GTSAC	1 cut(s)	728
NspI	RCATGY	1 cut(s)	221
PaeR7I	CTCGAG	1 cut(s)	1095
PciSI	GCTCTTC	1 cut(s)	921
PfeI	GAWTC	1 cut(s)	419
PflMI	CCANNNNNTGG	1 cut(s)	344
PkrI	GCNGC	4 cut(s)	223, 232, 376, 1013
PleI	GAGTC	3 cut(s)	301, 310, 627
PpsI	GAGTC	3 cut(s)	301, 310, 627
Psp124BI	GAGCTC	1 cut(s)	916
Psp6I	CCWGG	2 cut(s)	724, 919
PspFI	CCCAGC	1 cut(s)	593
PspGI	CCWGG	2 cut(s)	724, 919
PspN4I	GGNNCC	5 cut(s)	25, 103, 599, 1160, 1172
PspPI	GGNCC	5 cut(s)	362, 598, 608, 641, 1159
PsuI	RGATCY	1 cut(s)	211
PvuII	CAGCTG	1 cut(s)	230
RsaI	GTAC	1 cut(s)	694
RsaNI	GTAC	1 cut(s)	693
RseI	CAYNNNNRTG	1 cut(s)	1107
SacI	GAGCTC	1 cut(s)	916
SalI	GTCGAC	1 cut(s)	138
SapI	GCTCTTC	1 cut(s)	921
SaqAI	TTAA	2 cut(s)	116, 246
SatI	GCNGC	4 cut(s)	222, 231, 375, 1012
Sau3AI	GATC	6 cut(s)	211, 310, 334, 352, 1111, 1147
Sau96I	GGNCC	5 cut(s)	362, 598, 608, 641, 1159
SchI	GAGTC	3 cut(s)	302, 310, 627
ScrFI	CCNGG	3 cut(s)	726, 921, 1157
SduI	GDGCHC	4 cut(s)	28, 529, 622, 916
SexAI	ACCWGGT	1 cut(s)	724
SfaNI	GCATC	3 cut(s)	181, 233, 580
SfcI	CTRYAG	1 cut(s)	624
Sfr274I	CTCGAG	1 cut(s)	1095
SinI	GGWCC	4 cut(s)	362, 608, 641, 1159
SlaI	CTCGAG	1 cut(s)	1095
SmiMI	CAYNNNNRTG	1 cut(s)	1107
SmlI	CTYRAG	2 cut(s)	866, 1095
SmoI	CTYRAG	2 cut(s)	866, 1095
Sse9I	AATT	7 cut(s)	147, 167, 257, 487, 679, 791, 875
SsiI	CCGC	2 cut(s)	348, 817
SspMI	CTAG	1 cut(s)	896
SstI	GAGCTC	1 cut(s)	916
StyD4I	CCNGG	3 cut(s)	724, 919, 1155
StyI	CCWWGG	1 cut(s)	262
TaaI	ACNGT	2 cut(s)	199, 1175
TaiI	ACGT	5 cut(s)	206, 461, 760, 814, 934
TaqI	TCGA	9 cut(s)	139, 406, 412, 529, 1048, 1054, 1096, 1114, 1150
TaqII	GACCGA	2 cut(s)	157, 1021
TasI	AATT	7 cut(s)	147, 167, 257, 487, 679, 791, 875
TfiI	GAWTC	1 cut(s)	419
Tru1I	TTAA	2 cut(s)	116, 246
Tru9I	TTAA	2 cut(s)	116, 246
TseFI	GTSAC	1 cut(s)	728
TseI	GCWGC	4 cut(s)	221, 230, 374, 1011
Tsp45I	GTSAC	1 cut(s)	728
TspDTI	ATGAA	4 cut(s)	90, 222, 750, 798
Van91I	CCANNNNNTGG	1 cut(s)	344
VpaK11BI	GGWCC	4 cut(s)	362, 608, 641, 1159
XapI	RAATTY	4 cut(s)	147, 257, 487, 875
XceI	RCATGY	1 cut(s)	221
XhoI	CTCGAG	1 cut(s)	1095
XmiI	GTMKAC	1 cut(s)	139
XspI	CTAG	1 cut(s)	896
ZraI	GACGTC	1 cut(s)	812

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.