Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0007884

Physical Location & Seq

Genomic Coordinates Reverse (-)

1572 .. 5357

Gene Structure 3786 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1000100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1200 bp

ATGGCAACCTATACAGGAAAAGGAGCCCCTTCAAATGGGTCTATTTATGTTTGCAACTTGCCTGAGGGGACTGATGAAAATATGTTGGCTGAACATTTTGGCACCATTGGCTTGTTAAAGAAAGACAAGCGAACAGGTCGACCAAAAATCTGGCTATACCGAGACAAATTAACCAACGAACCCAAGGGAGATGCTACTGTAACATATGAAGATCCACATGCTGCATCAGCGGCCGTTGAATGGTTTAATGACAAGGAATTCCATGGTAATACCATTGGGGTTTTTATAGCTGAGTCCAAAAGCAAAGATGATCAAACTCATAACACTCTGGTTGATCCAAGTTTTGGCGATGATTTTGATGGACCGGAGGAAGCTGCTCAGGATACGAATGGGGGAGGCGGCGGCGGTAGAGGTCGAGGTGATGCTACTGGGAAAGCATGGCAACAAGAAGGAGACTGGACGTGCCCGAATACAAGCTGTGCCAATGTGAATTTTGCATTTCGTGGTGTGTGCAATCGCTGTGGAAGTGCTCGACCTACCGGTACTTCTGGTGGCGCAGGGGGTGGTGGTCGTGGCAGGGGTCGTGGCGTTGATGCTGGGGGCCGTGGTGGTCCTGTTGGTGCTCCTACAGGTGGACTCTTTGGTCCAAATGACTGGCCTTGTCCAATGTGTGCCAACATCAATTGGGCAAAGCGTACAAAATGCAATATATGCAACACAAATAAACCTGGTCACAATGAAGGGGGTGTAAGGGGGGGACGTGGTGGTGGATACAAGGAACTTGATGAAGAAGAATTAGAAGAAATCAAGCGACGTAGACGGGAGGCAGAACAAGATGATGGAGAGATGTATGATGAGTTTGGCAACCTCAAGAAAAAATTTCGTGCTAAAACACATCCAACTGAAACTGGACGAGCTCTTCCAGGCGCTGGACGTGCTGGGTGGGAGGTGGAGGAAATAGGTGCTATTGACAGAGATGGCAGAGAGAGAAATAGAGAGAGGGGAAGGGAACGCGATGATAGACCGAGCAGCAAGAACAGAGACAGAGATGATGGTTATAGGCGTCGCAGTCGAAGTAGAGAAAGGGATAGGGATAGGGGGAGAGATAGACCTCGAGACTATGATTATGATCGAGAAAAAGAATACGGGAGGGAGAGGGATCGAGACCGGGACCGGGACCGGCACAGGCACCGTTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006366 GO:0006367 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0023051 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:1901796 GO:1902531 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03022 ko05202 map03022 map05202

Pfam Domains

Protein Families

RRM_1 zf-RanBP

Protein Analysis

400

Amino Acids

44.35

Weight (kDa)

8.29

Isoelectric Point (pI)

34.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	15 - 92	9.8e-09	RNA recognition motif
Zn_ribbon_RanBP	PF00641	150 - 179	1e-05	Zn-finger in Ran binding protein and others

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007884)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50300 AT1G50300
fragaria_vesca	FvH4_4g36691 FvH4_4g36691
malus_domestica	MD13G1008100.v1.1 MD16G1000100.v1.1
prunus_persica	Prupe.1G345000_v2.0.a1 Prupe.1G345000_v2.0.a1 Prupe.1G345000_v2.0.a1 Prupe.1G345000_v2.0.a1 Prupe.1G345000_v2.0.a1 Prupe.1G345000_v2.0.a1 Prupe.1G345000_v2.0.a1 Prupe.1G345000_v2.0.a1
pyrus_communis	pycom13g00660 pycom16g00530
rosa_chinensis	RchiOBHm_Chr4g0446411
rosa_laevigata	RLG00000005663
rosa_multiflora	Rmu_sc0037453.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386850
rosa_samantha	Rh4AG432700 Rh4CG459200 Rh4DG440600
rosa_wichuraiana	Rw4G036960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	642
AccB1I	GGYRCC	2 cut(s)	101, 1188
AccB7I	CCANNNNNTGG	2 cut(s)	344, 929
AccI	GTMKAC	2 cut(s)	139, 817
AccII	CGCG	1 cut(s)	1014
AciI	CCGC	4 cut(s)	230, 399, 402, 405
AclWI	GGATC	3 cut(s)	206, 329, 1167
AcoI	YGGCCR	1 cut(s)	231
AcsI	RAATTY	3 cut(s)	257, 490, 878
AcyI	GRCGYC	1 cut(s)	1063
AfaI	GTAC	2 cut(s)	544, 697
AfiI	CCNNNNNNNGG	6 cut(s)	35, 240, 344, 632, 929, 1174
AgeI	ACCGGT	1 cut(s)	539
AgsI	TTSAA	2 cut(s)	33, 239
AjiI	CACGTC	3 cut(s)	462, 761, 935
AjnI	CCWGG	2 cut(s)	727, 922
AluBI	AGCT	4 cut(s)	290, 374, 477, 917
AluI	AGCT	4 cut(s)	290, 374, 477, 917
Alw21I	GWGCWC	3 cut(s)	532, 625, 919
Alw26I	GTCTC	5 cut(s)	156, 447, 1035, 1110, 1158
AlwI	GGATC	3 cut(s)	206, 329, 1167
AlwNI	CAGNNNCTG	1 cut(s)	929
Ama87I	CYCGRG	1 cut(s)	1113
AoxI	GGCC	3 cut(s)	231, 601, 656
ApeKI	GCWGC	3 cut(s)	221, 374, 1029
ApoI	RAATTY	3 cut(s)	257, 490, 878
AsiGI	ACCGGT	1 cut(s)	539
AspLEI	GCGC	2 cut(s)	557, 929
AspS9I	GGNCC	6 cut(s)	362, 601, 611, 644, 1171, 1177
AsuC2I	CCSGG	2 cut(s)	1169, 1175
AsuHPI	GGTGA	1 cut(s)	431
AvaI	CYCGRG	1 cut(s)	1113
AvaII	GGWCC	5 cut(s)	362, 611, 644, 1171, 1177
AxyI	CCTNAGG	1 cut(s)	63
BaeGI	GKGCMC	1 cut(s)	467
BanI	GGYRCC	2 cut(s)	101, 1188
BanII	GRGCYC	2 cut(s)	28, 919
Bbv12I	GWGCWC	3 cut(s)	532, 625, 919
BbvI	GCAGC	3 cut(s)	208, 361, 1041
BccI	CCATC	4 cut(s)	353, 833, 971, 1046
BceAI	ACGGC	2 cut(s)	218, 588
BciT130I	CCWGG	2 cut(s)	729, 924
BciVI	GTATCC	2 cut(s)	376, 764
BclI	TGATCA	1 cut(s)	310
BcnI	CCSGG	2 cut(s)	1169, 1175
BcoDI	GTCTC	5 cut(s)	156, 447, 1035, 1110, 1158
BfmI	CTRYAG	1 cut(s)	627
BfoI	RGCGCY	1 cut(s)	930
BfuI	GTATCC	2 cut(s)	376, 764
BisI	GCNGC	6 cut(s)	222, 231, 375, 400, 403, 1030
BlsI	GCNGC	6 cut(s)	223, 232, 376, 401, 404, 1031
Bme1390I	CCNGG	4 cut(s)	729, 924, 1169, 1175
Bme18I	GGWCC	5 cut(s)	362, 611, 644, 1171, 1177
BmeT110I	CYCGRG	1 cut(s)	1113
BmgBI	CACGTC	3 cut(s)	462, 761, 935
BmgT120I	GGNCC	6 cut(s)	362, 601, 611, 644, 1171, 1177
BmiI	GGNNCC	6 cut(s)	25, 103, 602, 1172, 1178, 1190
BmrFI	CCNGG	4 cut(s)	729, 924, 1169, 1175
BmrI	ACTGGG	1 cut(s)	438
BmsI	GCATC	4 cut(s)	181, 233, 412, 583
BmuI	ACTGGG	1 cut(s)	438
Bpu10I	CCTNAGC	1 cut(s)	378
BpuEI	CTTGAG	1 cut(s)	854
BpuMI	CCSGG	2 cut(s)	1169, 1175
BsaBI	GATNNNNATC	1 cut(s)	1128
BsaHI	GRCGYC	1 cut(s)	1063
BsaI	GGTCTC	1 cut(s)	1158
BsaJI	CCNNGG	3 cut(s)	183, 262, 604
BsaWI	WCCGGW	2 cut(s)	364, 539
Bsc4I	CCNNNNNNNGG	6 cut(s)	35, 240, 344, 632, 929, 1174
Bse118I	RCCGGY	2 cut(s)	539, 1179
Bse1I	ACTGG	4 cut(s)	433, 461, 659, 913
Bse21I	CCTNAGG	1 cut(s)	63
Bse8I	GATNNNNATC	1 cut(s)	1128
BseBI	CCWGG	2 cut(s)	729, 924
BseDI	CCNNGG	3 cut(s)	183, 262, 604
BseGI	GGATG	1 cut(s)	895
BseJI	GATNNNNATC	1 cut(s)	1128
BseLI	CCNNNNNNNGG	6 cut(s)	35, 240, 344, 632, 929, 1174
BseMII	CTCAG	3 cut(s)	54, 282, 392
BseNI	ACTGG	4 cut(s)	433, 461, 659, 913
BseSI	GKGCMC	1 cut(s)	467
BseX3I	CGGCCG	1 cut(s)	231
BseXI	GCAGC	3 cut(s)	208, 361, 1041
BseYI	CCCAGC	2 cut(s)	596, 938
Bsh1236I	CGCG	1 cut(s)	1014
Bsh1285I	CGRYCG	1 cut(s)	234
BshFI	GGCC	3 cut(s)	233, 603, 658
BshNI	GGYRCC	2 cut(s)	101, 1188
BshTI	ACCGGT	1 cut(s)	539
BsiEI	CGRYCG	1 cut(s)	234
BsiHKAI	GWGCWC	3 cut(s)	532, 625, 919
BsiHKCI	CYCGRG	1 cut(s)	1113
BsiSI	CCGG	5 cut(s)	365, 540, 1168, 1174, 1180
BslFI	GGGAC	4 cut(s)	82, 771, 1184, 1190
BslI	CCNNNNNNNGG	6 cut(s)	35, 240, 344, 632, 929, 1174
BsmAI	GTCTC	5 cut(s)	156, 447, 1035, 1110, 1158
BsmFI	GGGAC	4 cut(s)	82, 771, 1184, 1190
BsnI	GGCC	3 cut(s)	233, 603, 658
Bso31I	GGTCTC	1 cut(s)	1158
BsoBI	CYCGRG	1 cut(s)	1113
Bsp1286I	GDGCHC	5 cut(s)	28, 467, 532, 625, 919
Bsp143I	GATC	5 cut(s)	211, 310, 334, 1129, 1159
Bsp19I	CCATGG	1 cut(s)	262
BspACI	CCGC	4 cut(s)	230, 399, 402, 405
BspANI	GGCC	3 cut(s)	233, 603, 658
BspCNI	CTCAG	3 cut(s)	55, 283, 391
BspFNI	CGCG	1 cut(s)	1014
BspLI	GGNNCC	6 cut(s)	25, 103, 602, 1172, 1178, 1190
BspPI	GGATC	3 cut(s)	206, 329, 1167
BspQI	GCTCTTC	1 cut(s)	924
BspT107I	GGYRCC	2 cut(s)	101, 1188
BspTNI	GGTCTC	1 cut(s)	1158
BsrFI	RCCGGY	2 cut(s)	539, 1179
BsrI	ACTGG	4 cut(s)	433, 461, 659, 913
BssAI	RCCGGY	2 cut(s)	539, 1179
BssECI	CCNNGG	3 cut(s)	183, 262, 604
BssMI	GATC	5 cut(s)	211, 310, 334, 1129, 1159
BssNI	GRCGYC	1 cut(s)	1063
BssT1I	CCWWGG	2 cut(s)	183, 262
Bst2UI	CCWGG	2 cut(s)	729, 924
Bst4CI	ACNGT	2 cut(s)	199, 1193
Bst6I	CTCTTC	1 cut(s)	924
BstACI	GRCGYC	1 cut(s)	1063
BstAPI	GCANNNNNTGC	1 cut(s)	711
BstDEI	CTNAG	3 cut(s)	63, 291, 378
BstDSI	CCRYGG	2 cut(s)	262, 604
BstF5I	GGATG	1 cut(s)	895
BstFNI	CGCG	1 cut(s)	1014
BstH2I	RGCGCY	1 cut(s)	930
BstHHI	GCGC	2 cut(s)	557, 929
BstKTI	GATC	5 cut(s)	214, 313, 337, 1132, 1162
BstMAI	GTCTC	5 cut(s)	156, 447, 1035, 1110, 1158
BstMBI	GATC	5 cut(s)	211, 310, 334, 1129, 1159
BstMCI	CGRYCG	1 cut(s)	234
BstMWI	GCNNNNNNNGC	5 cut(s)	108, 227, 230, 711, 935
BstNI	CCWGG	2 cut(s)	729, 924
BstNSI	RCATGY	1 cut(s)	221
BstSCI	CCNGG	4 cut(s)	727, 922, 1167, 1173
BstSFI	CTRYAG	1 cut(s)	627
BstSLI	GKGCMC	1 cut(s)	467
BstUI	CGCG	1 cut(s)	1014
BstV1I	GCAGC	3 cut(s)	208, 361, 1041
BstX2I	RGATCY	1 cut(s)	211
BstXI	CCANNNNNNTGG	2 cut(s)	150, 654
BstYI	RGATCY	1 cut(s)	211
BstZI	CGGCCG	1 cut(s)	231
Bsu36I	CCTNAGG	1 cut(s)	63
BsuI	GTATCC	2 cut(s)	376, 764
BsuRI	GGCC	3 cut(s)	233, 603, 658
BtgI	CCRYGG	2 cut(s)	262, 604
BtgZI	GCGATG	2 cut(s)	363, 1029
BtrI	CACGTC	3 cut(s)	462, 761, 935
BtsCI	GGATG	1 cut(s)	895
CaiI	CAGNNNCTG	1 cut(s)	929
CfoI	GCGC	2 cut(s)	557, 929
Cfr10I	RCCGGY	2 cut(s)	539, 1179
Cfr13I	GGNCC	6 cut(s)	362, 601, 611, 644, 1171, 1177
CseI	GACGC	1 cut(s)	1052
CsiI	ACCWGGT	1 cut(s)	727
Csp6I	GTAC	2 cut(s)	543, 696
CspAI	ACCGGT	1 cut(s)	539
CspCI	CAANNNNNGTGG	2 cut(s)	502, 537
CviAII	CATG	3 cut(s)	218, 263, 438
CviQI	GTAC	2 cut(s)	543, 696
DdeI	CTNAG	3 cut(s)	63, 291, 378
DpnI	GATC	5 cut(s)	213, 312, 336, 1131, 1161
DpnII	GATC	5 cut(s)	211, 310, 334, 1129, 1159
DrdI	GACNNNNNNGTC	1 cut(s)	642
DseDI	GACNNNNNNGTC	1 cut(s)	642
EaeI	YGGCCR	1 cut(s)	231
EagI	CGGCCG	1 cut(s)	231
Eam1104I	CTCTTC	1 cut(s)	924
EarI	CTCTTC	1 cut(s)	924
Ecl136II	GAGCTC	1 cut(s)	917
EclXI	CGGCCG	1 cut(s)	231
Eco130I	CCWWGG	2 cut(s)	183, 262
Eco24I	GRGCYC	2 cut(s)	28, 919
Eco31I	GGTCTC	1 cut(s)	1158
Eco47I	GGWCC	5 cut(s)	362, 611, 644, 1171, 1177
Eco52I	CGGCCG	1 cut(s)	231
Eco53kI	GAGCTC	1 cut(s)	917
Eco81I	CCTNAGG	1 cut(s)	63
Eco88I	CYCGRG	1 cut(s)	1113
EcoICRI	GAGCTC	1 cut(s)	917
EcoRI	GAATTC	1 cut(s)	257
EcoRII	CCWGG	2 cut(s)	727, 922
EcoT14I	CCWWGG	2 cut(s)	183, 262
EcoT38I	GRGCYC	2 cut(s)	28, 919
ErhI	CCWWGG	2 cut(s)	183, 262
FaeI	CATG	3 cut(s)	221, 266, 441
FaqI	GGGAC	4 cut(s)	82, 771, 1184, 1190
FatI	CATG	3 cut(s)	217, 262, 437
FauNDI	CATATG	1 cut(s)	205
FbaI	TGATCA	1 cut(s)	310
FblI	GTMKAC	2 cut(s)	139, 817
Fnu4HI	GCNGC	6 cut(s)	222, 231, 375, 400, 403, 1030
FokI	GGATG	1 cut(s)	882
FriOI	GRGCYC	2 cut(s)	28, 919
Fsp4HI	GCNGC	6 cut(s)	222, 231, 375, 400, 403, 1030
GlaI	GCGC	2 cut(s)	556, 928
GluI	GCNGC	6 cut(s)	222, 231, 375, 400, 403, 1030
GsaI	CCCAGC	2 cut(s)	600, 942
HaeII	RGCGCY	1 cut(s)	930
HaeIII	GGCC	3 cut(s)	233, 603, 658
HapII	CCGG	5 cut(s)	365, 540, 1168, 1174, 1180
HgaI	GACGC	1 cut(s)	1052
HhaI	GCGC	2 cut(s)	557, 929
Hin1I	GRCGYC	1 cut(s)	1063
Hin1II	CATG	3 cut(s)	221, 266, 441
Hin6I	GCGC	2 cut(s)	555, 927
HinP1I	GCGC	2 cut(s)	555, 927
HincII	GTYRAC	1 cut(s)	140
HindII	GTYRAC	1 cut(s)	140
HinfI	GANTC	2 cut(s)	293, 636
HpaII	CCGG	5 cut(s)	365, 540, 1168, 1174, 1180
HphI	GGTGA	1 cut(s)	431
Hpy166II	GTNNAC	3 cut(s)	140, 635, 818
Hpy188III	TCNNGA	5 cut(s)	380, 871, 1115, 1133, 1163
Hpy8I	GTNNAC	3 cut(s)	140, 635, 818
Hpy99I	CGWCG	2 cut(s)	816, 1068
HpyAV	CCTTC	4 cut(s)	39, 443, 734, 999
HpyCH4III	ACNGT	2 cut(s)	199, 1193
HpyCH4IV	ACGT	4 cut(s)	461, 760, 814, 934
HpyCH4V	TGCA	6 cut(s)	54, 224, 497, 513, 705, 714
HpyF10VI	GCNNNNNNNGC	5 cut(s)	108, 227, 230, 711, 935
HpyF3I	CTNAG	3 cut(s)	63, 291, 378
HpySE526I	ACGT	4 cut(s)	461, 760, 814, 934
Hsp92I	GRCGYC	1 cut(s)	1063
Hsp92II	CATG	3 cut(s)	221, 266, 441
HspAI	GCGC	2 cut(s)	555, 927
Ksp22I	TGATCA	1 cut(s)	310
Kzo9I	GATC	5 cut(s)	211, 310, 334, 1129, 1159
LguI	GCTCTTC	1 cut(s)	924
LmnI	GCTCC	2 cut(s)	23, 628
Lsp1109I	GCAGC	3 cut(s)	208, 361, 1041
LweI	GCATC	4 cut(s)	181, 233, 412, 583
MabI	ACCWGGT	1 cut(s)	727
MaeII	ACGT	4 cut(s)	461, 760, 814, 934
MaeIII	GTNAC	2 cut(s)	199, 731
MalI	GATC	5 cut(s)	213, 312, 336, 1131, 1161
MboI	GATC	5 cut(s)	211, 310, 334, 1129, 1159
MboII	GAAGA	5 cut(s)	221, 800, 803, 812, 911
MfeI	CAATTG	1 cut(s)	682
MflI	RGATCY	1 cut(s)	211
MhlI	GDGCHC	5 cut(s)	28, 467, 532, 625, 919
MluCI	AATT	6 cut(s)	167, 257, 490, 682, 794, 878
MlyI	GAGTC	2 cut(s)	302, 630
MmeI	TCCRAC	1 cut(s)	923
MseI	TTAA	3 cut(s)	116, 170, 246
MspA1I	CMGCKG	1 cut(s)	230
MspI	CCGG	5 cut(s)	365, 540, 1168, 1174, 1180
MspR9I	CCNGG	4 cut(s)	729, 924, 1169, 1175
MunI	CAATTG	1 cut(s)	682
MvaI	CCWGG	2 cut(s)	729, 924
MvnI	CGCG	1 cut(s)	1014
MwoI	GCNNNNNNNGC	5 cut(s)	108, 227, 230, 711, 935
NciI	CCSGG	2 cut(s)	1169, 1175
NcoI	CCATGG	1 cut(s)	262
NdeI	CATATG	1 cut(s)	205
NdeII	GATC	5 cut(s)	211, 310, 334, 1129, 1159
NlaIII	CATG	3 cut(s)	221, 266, 441
NlaIV	GGNNCC	6 cut(s)	25, 103, 602, 1172, 1178, 1190
NmuCI	GTSAC	1 cut(s)	731
NspI	RCATGY	1 cut(s)	221
PaeR7I	CTCGAG	1 cut(s)	1113
PciSI	GCTCTTC	1 cut(s)	924
PflMI	CCANNNNNTGG	2 cut(s)	344, 929
PinAI	ACCGGT	1 cut(s)	539
PkrI	GCNGC	6 cut(s)	223, 232, 376, 401, 404, 1031
PleI	GAGTC	2 cut(s)	301, 630
PpsI	GAGTC	2 cut(s)	301, 630
Psp124BI	GAGCTC	1 cut(s)	919
Psp6I	CCWGG	2 cut(s)	727, 922
PspFI	CCCAGC	2 cut(s)	596, 938
PspGI	CCWGG	2 cut(s)	727, 922
PspN4I	GGNNCC	6 cut(s)	25, 103, 602, 1172, 1178, 1190
PspPI	GGNCC	6 cut(s)	362, 601, 611, 644, 1171, 1177
PstNI	CAGNNNCTG	1 cut(s)	929
PsuI	RGATCY	1 cut(s)	211
RsaI	GTAC	2 cut(s)	544, 697
RsaNI	GTAC	2 cut(s)	543, 696
SacI	GAGCTC	1 cut(s)	919
SalI	GTCGAC	1 cut(s)	138
SapI	GCTCTTC	1 cut(s)	924
SaqAI	TTAA	3 cut(s)	116, 170, 246
SatI	GCNGC	6 cut(s)	222, 231, 375, 400, 403, 1030
Sau3AI	GATC	5 cut(s)	211, 310, 334, 1129, 1159
Sau96I	GGNCC	6 cut(s)	362, 601, 611, 644, 1171, 1177
SchI	GAGTC	2 cut(s)	302, 630
ScrFI	CCNGG	4 cut(s)	729, 924, 1169, 1175
SduI	GDGCHC	5 cut(s)	28, 467, 532, 625, 919
SexAI	ACCWGGT	1 cut(s)	727
SfaNI	GCATC	4 cut(s)	181, 233, 412, 583
SfcI	CTRYAG	1 cut(s)	627
Sfr274I	CTCGAG	1 cut(s)	1113
SinI	GGWCC	5 cut(s)	362, 611, 644, 1171, 1177
SlaI	CTCGAG	1 cut(s)	1113
SmlI	CTYRAG	2 cut(s)	869, 1113
SmoI	CTYRAG	2 cut(s)	869, 1113
Sse9I	AATT	6 cut(s)	167, 257, 490, 682, 794, 878
SsiI	CCGC	4 cut(s)	230, 399, 402, 405
SstI	GAGCTC	1 cut(s)	919
StyD4I	CCNGG	4 cut(s)	727, 922, 1167, 1173
StyI	CCWWGG	2 cut(s)	183, 262
TaaI	ACNGT	2 cut(s)	199, 1193
TaiI	ACGT	4 cut(s)	464, 763, 817, 937
TaqI	TCGA	7 cut(s)	139, 415, 532, 1072, 1114, 1132, 1162
TaqII	GACCGA	1 cut(s)	1039
TasI	AATT	6 cut(s)	167, 257, 490, 682, 794, 878
TauI	GCSGC	3 cut(s)	233, 402, 405
Tru1I	TTAA	3 cut(s)	116, 170, 246
Tru9I	TTAA	3 cut(s)	116, 170, 246
TseFI	GTSAC	1 cut(s)	731
TseI	GCWGC	3 cut(s)	221, 374, 1029
Tsp45I	GTSAC	1 cut(s)	731
TspDTI	ATGAA	4 cut(s)	90, 222, 753, 801
Van91I	CCANNNNNTGG	2 cut(s)	344, 929
VpaK11BI	GGWCC	5 cut(s)	362, 611, 644, 1171, 1177
XapI	RAATTY	3 cut(s)	257, 490, 878
XceI	RCATGY	1 cut(s)	221
XhoI	CTCGAG	1 cut(s)	1113
XmiI	GTMKAC	2 cut(s)	139, 817

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.