MD13G1085800.v1.1

WD domain, G-beta repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0015016
Physical Location & Seq
Forward (+)
6034953 .. 6036260
1308 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1085800.v1.1.491

Sequence Viewer

Length: 1308 bp
ATGGGACTTGTTCCTTTCCCCTTGCCCTGTCACACAAAAGAATCTACTGAAGAATCCTTAACCTCCAGCTCCACCACCTCCGGTCTTCACTCTGAGTCATCAACCTCCTCCTCCCTATCGTCCCAGCCAAGTCTCCCTTCTGTTCCTTCTCCTCCTTCATCAAAATCCAACCAATTAGAAGTAATGCGATCCCCAAGTGTTCACCACCACTGCATAGCCACCCTCCAATCCCAGTCATACATCTGTACCTTAGCCCTTTCTGGAAACTTCTTATACAGTGGCTCATCCGACGGCCAGATTACAGCGTGGAGTAGTATCCTATCACATCCTTCAAATCCACAGTACAACAAGGTGGTAGCCACTCCCAGCACTGTAAAGTCTCTGGTGGTTGTTGGGAGTGGGGACGACCGCAACAAGCTCTTATTCAGTGCTCACCAAGACCATAAAATCCGAGTCTGGAAAATCAACACGACCGACACGCATGAAAAACTAAAATGTATAGCCACACTCCCAACTCTAAAAGACCGTGCCACAAGCTTCTTCTTCTCCAAGAACTACGTGCAAATCCGGCGCCACAAGAAGTGCACCTGGGTGCACCACGTCGACACCGTCTCCGCTCTAGCCATATCCAACGACGGGTCGTTTCTCTACTCCGTTTCATGGGACCGGACGCTCAAAATATGGCGGACTTCCGATTTTAAATGCTTGGAGTCGGTGGGCAACGCCCACGACGACGCCATCAACGCCGTAACTTTATCACGTGACGGAACGTTTGTATACACCGGCGCCGCGGATAAGAAAATAAAGGTGTGGACGTGGAAGAAAGACAAGTCAATGTCAGTAAGGCTTGTTGGAACTCTAGAGAAGCACAAGTCAGCTGTGAATGCCTTGGCTTTTAACTCCGACGGGTCCGTGCTGTACTCCGGTGCCTGCGACCGGTCGATTTTGGTTTGGGAAAGAGATGGTGGTGAGGACGGCGGTTGGGGGGACATGGTGGTGGTGGGTGCGTTGAGGGGACACACAAAGGCGGTATTGTGTTTGTCGGTGGTGGCAGATTTGGTGTGTAGTGGGTCGGCAGATTATAGTGTTAGGGTTTGGAGGAGATTATCGTCAGGGCTAGTTGGCGATTATCGTAATAGGAGTTATTGCTGTTTGGCTGTGTTGGAAGGTCACAGGCGGCCGGTGAAGTGTTTGACTGCAGCTGTTGATAATACTGATTCTGATTATTCTGGTGATTCTTATTCTGTTTATAGTGGCAGCTTGGATTGTTATATTAAGGTCTGGCAAATACGGGTTCCCTTTTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04934 map04934
Pfam Domains
Protein Families
WD40

Protein Analysis

436

Amino Acids

47.64

Weight (kDa)

8.77

Isoelectric Point (pI)

40.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_SCAP PF24017 32 - 322 1e-06 SCAP Beta-propeller
WD40_CDC20-Fz PF24807 63 - 228 1.4e-07 CDC20/Fizzy WD40 domain
Beta-prop_WDR36-Utp21_2nd PF25168 77 - 230 5e-06 WDR36/Utp21 second beta-propeller domain
WD40_Prp19 PF24814 87 - 319 1.3e-16 Prp19 WD40 domain
WD40_MABP1-WDR62_2nd PF24782 190 - 319 3.7e-06 MABP1/WDR62 second WD40 domain
WDR55 PF24796 192 - 278 4.6e-09 WDR55
Beta-prop_EML_2 PF23414 192 - 323 1.2e-11 Echinoderm microtubule-associated protein second beta-propeller
WD40_Gbeta PF25391 193 - 366 1.3e-09 G protein beta WD-40 repeat protein
WD40 PF00400 196 - 228 1.3e-06 WD domain, G-beta repeat
Beta-prop_WDR3_1st PF25173 198 - 272 2.4e-10 WDR3 first beta-propeller domain
Beta-prop_WDR5 PF25175 199 - 323 2.1e-23 WDR5 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd PF25168 199 - 319 1e-05 WDR36/Utp21 second beta-propeller domain
Beta-prop_THOC3 PF25174 199 - 277 1.5e-10 THOC3 beta-propeller domain
Beta-prop_WDR3_2nd PF25172 204 - 320 3.7e-15 WDR3 second beta-propeller domain
Beta-prop_EML_2 PF23414 205 - 367 6.6e-12 Echinoderm microtubule-associated protein second beta-propeller
WD40_CDC20-Fz PF24807 239 - 320 3.8e-09 CDC20/Fizzy WD40 domain
WD40 PF00400 241 - 271 1.7e-06 WD domain, G-beta repeat
WD40_WDHD1_1st PF24817 246 - 321 1.1e-07 WDHD1 first WD40 domain
Beta-prop_CAF1B_HIR1 PF24105 260 - 367 7.6e-10 CAF1B/HIR1 beta-propeller domain
Beta-prop_EML PF23409 267 - 367 9.1e-06 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR3_1st PF25173 283 - 366 1.7e-10 WDR3 first beta-propeller domain
WD40 PF00400 283 - 318 3.3e-08 WD domain, G-beta repeat
EIF3I PF24805 287 - 367 5.1e-07 EIF3I
Beta-prop_THOC3 PF25174 290 - 367 1.3e-10 THOC3 beta-propeller domain
Beta-prop_WDR5 PF25175 334 - 430 1.1e-06 WDR5 beta-propeller domain
Beta-prop_TEP1_2nd PF25047 336 - 432 9e-07 TEP-1 second beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0015016)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G24130
fragaria_vesca FvH4_4g35150
malus_domestica MD13G1085800.v1.1 MD16G1085100.v1.1
prunus_persica Prupe.1G260900_v2.0.a1
pyrus_communis pycom13g07420 pycom16g07360
rosa_chinensis RchiOBHm_Chr4g0444751
rosa_laevigata RLG00000005805
rosa_multiflora Rmu_sc0000096.1_g000011
rosa_roxburghii Rroxscaffold_5G00385270
rosa_samantha Rh4AG415800 Rh4BG427100 Rh4CG442000 Rh4DG423100
rosa_wichuraiana Rw4G035680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 570, 785, 926
AccBSI CCGCTC 1 cut(s) 617
AccI GTMKAC 2 cut(s) 603, 777
AccII CGCG 1 cut(s) 791
AciI CCGC 8 cut(s) 409, 615, 685, 789, 791, 978, 1028, 1177
AclI AACGTT 1 cut(s) 770
AclWI GGATC 1 cut(s) 183
AcoI YGGCCR 2 cut(s) 292, 1178
AcuI CTGAAG 1 cut(s) 69
AcvI CACGTG 1 cut(s) 761
AcyI GRCGYC 3 cut(s) 571, 735, 786
AfaI GTAC 3 cut(s) 247, 344, 920
AfiI CCNNNNNNNGG 3 cut(s) 636, 660, 936
AgeI ACCGGT 1 cut(s) 936
AgsI TTSAA 1 cut(s) 333
AjiI CACGTC 2 cut(s) 601, 816
AjnI CCWGG 1 cut(s) 587
AjuI GAANNNNNNNTTGG 2 cut(s) 121, 153
AleI CACNNNNGTG 1 cut(s) 590
AluBI AGCT 6 cut(s) 69, 418, 537, 878, 1202, 1260
AluI AGCT 6 cut(s) 69, 418, 537, 878, 1202, 1260
Alw21I GWGCWC 3 cut(s) 433, 587, 597
Alw26I GTCTC 3 cut(s) 137, 384, 616
Alw44I GTGCAC 2 cut(s) 583, 593
AlwI GGATC 1 cut(s) 183
AoxI GGCC 2 cut(s) 292, 1178
ApaLI GTGCAC 2 cut(s) 583, 593
ApeKI GCWGC 2 cut(s) 1199, 1257
ArsI GACNNNNNNTTYG 2 cut(s) 755, 787
AsiGI ACCGGT 1 cut(s) 936
AspLEI GCGC 2 cut(s) 573, 788
AspS9I GGNCC 2 cut(s) 664, 909
AsuHPI GGTGA 5 cut(s) 194, 425, 980, 1195, 1244
AvaII GGWCC 2 cut(s) 664, 909
BaeGI GKGCMC 2 cut(s) 587, 597
BaeI ACNNNNGTAYC 2 cut(s) 229, 262
BanI GGYRCC 3 cut(s) 570, 785, 926
BbrPI CACGTG 1 cut(s) 761
BbsI GAAGAC 1 cut(s) 77
Bbv12I GWGCWC 3 cut(s) 433, 587, 597
BbvI GCAGC 2 cut(s) 1211, 1269
BccI CCATC 2 cut(s) 746, 956
BceAI ACGGC 3 cut(s) 307, 731, 991
BciT130I CCWGG 1 cut(s) 589
BciVI GTATCC 1 cut(s) 326
BcoDI GTCTC 3 cut(s) 137, 384, 616
BfaI CTAG 3 cut(s) 620, 860, 1118
BfmI CTRYAG 1 cut(s) 1197
BfoI RGCGCY 2 cut(s) 574, 789
BfuI GTATCC 1 cut(s) 326
BisI GCNGC 4 cut(s) 789, 1178, 1200, 1258
BlsI GCNGC 4 cut(s) 790, 1179, 1201, 1259
Bme1390I CCNGG 1 cut(s) 589
Bme18I GGWCC 2 cut(s) 664, 909
BmgBI CACGTC 2 cut(s) 601, 816
BmgT120I GGNCC 2 cut(s) 664, 909
BmiI GGNNCC 6 cut(s) 572, 665, 787, 910, 928, 1296
BmrFI CCNGG 1 cut(s) 589
BmrI ACTGGG 1 cut(s) 226
BmuI ACTGGG 1 cut(s) 226
BpiI GAAGAC 1 cut(s) 77
BpmI CTGGAG 1 cut(s) 49
Bpu10I CCTNAGC 1 cut(s) 250
BsaAI YACGTR 2 cut(s) 559, 761
BsaHI GRCGYC 3 cut(s) 571, 735, 786
BsaJI CCNNGG 3 cut(s) 588, 789, 888
BsaWI WCCGGW 4 cut(s) 80, 666, 923, 936
BsaXI ACNNNNNCTCC 2 cut(s) 596, 626
Bsc4I CCNNNNNNNGG 3 cut(s) 636, 660, 936
Bse118I RCCGGY 3 cut(s) 782, 936, 1180
Bse1I ACTGG 1 cut(s) 232
BseBI CCWGG 1 cut(s) 589
BseDI CCNNGG 3 cut(s) 588, 789, 888
BseGI GGATG 2 cut(s) 284, 325
BseLI CCNNNNNNNGG 3 cut(s) 636, 660, 936
BseMII CTCAG 1 cut(s) 84
BseNI ACTGG 1 cut(s) 232
BseRI GAGGAG 4 cut(s) 97, 100, 141, 1114
BseSI GKGCMC 2 cut(s) 587, 597
BseX3I CGGCCG 1 cut(s) 1178
BseXI GCAGC 2 cut(s) 1211, 1269
BseYI CCCAGC 2 cut(s) 123, 365
Bsh1236I CGCG 1 cut(s) 791
Bsh1285I CGRYCG 5 cut(s) 409, 474, 937, 941, 1181
BshFI GGCC 2 cut(s) 294, 1180
BshNI GGYRCC 3 cut(s) 570, 785, 926
BshTI ACCGGT 1 cut(s) 936
BsiEI CGRYCG 5 cut(s) 409, 474, 937, 941, 1181
BsiHKAI GWGCWC 3 cut(s) 433, 587, 597
BsiSI CCGG 7 cut(s) 81, 568, 667, 783, 924, 937, 1181
BslFI GGGAC 6 cut(s) 18, 106, 416, 677, 1001, 1029
BslI CCNNNNNNNGG 3 cut(s) 636, 660, 936
BsmAI GTCTC 3 cut(s) 137, 384, 616
BsmBI CGTCTC 1 cut(s) 616
BsmFI GGGAC 6 cut(s) 18, 106, 416, 677, 1001, 1029
BsmI GAATGC 1 cut(s) 889
BsnI GGCC 2 cut(s) 294, 1180
Bsp1286I GDGCHC 3 cut(s) 433, 587, 597
Bsp143I GATC 1 cut(s) 188
BspACI CCGC 8 cut(s) 409, 615, 685, 789, 791, 978, 1028, 1177
BspANI GGCC 2 cut(s) 294, 1180
BspCNI CTCAG 1 cut(s) 85
BspFNI CGCG 1 cut(s) 791
BspLI GGNNCC 6 cut(s) 572, 665, 787, 910, 928, 1296
BspMAI CTGCAG 1 cut(s) 1201
BspPI GGATC 1 cut(s) 183
BspT107I GGYRCC 3 cut(s) 570, 785, 926
BsrBI CCGCTC 1 cut(s) 617
BsrFI RCCGGY 3 cut(s) 782, 936, 1180
BsrI ACTGG 1 cut(s) 232
BssAI RCCGGY 3 cut(s) 782, 936, 1180
BssECI CCNNGG 3 cut(s) 588, 789, 888
BssMI GATC 1 cut(s) 188
BssNAI GTATAC 1 cut(s) 778
BssNI GRCGYC 3 cut(s) 571, 735, 786
BssT1I CCWWGG 1 cut(s) 888
Bst1107I GTATAC 1 cut(s) 778
Bst2UI CCWGG 1 cut(s) 589
Bst4CI ACNGT 5 cut(s) 278, 342, 373, 527, 610
BstACI GRCGYC 3 cut(s) 571, 735, 786
BstBAI YACGTR 2 cut(s) 559, 761
BstC8I GCNNGC 1 cut(s) 931
BstDEI CTNAG 2 cut(s) 93, 250
BstDSI CCRYGG 1 cut(s) 789
BstF5I GGATG 2 cut(s) 284, 325
BstFNI CGCG 1 cut(s) 791
BstH2I RGCGCY 2 cut(s) 574, 789
BstHHI GCGC 2 cut(s) 573, 788
BstKTI GATC 1 cut(s) 191
BstMAI GTCTC 3 cut(s) 137, 384, 616
BstMBI GATC 1 cut(s) 188
BstMCI CGRYCG 5 cut(s) 409, 474, 937, 941, 1181
BstMWI GCNNNNNNNGC 3 cut(s) 568, 743, 884
BstNI CCWGG 1 cut(s) 589
BstSCI CCNGG 1 cut(s) 587
BstSFI CTRYAG 1 cut(s) 1197
BstSLI GKGCMC 2 cut(s) 587, 597
BstUI CGCG 1 cut(s) 791
BstV1I GCAGC 2 cut(s) 1211, 1269
BstV2I GAAGAC 1 cut(s) 77
BstZ17I GTATAC 1 cut(s) 778
BstZI CGGCCG 1 cut(s) 1178
BsuI GTATCC 1 cut(s) 326
BsuRI GGCC 2 cut(s) 294, 1180
BtgI CCRYGG 1 cut(s) 789
BtrI CACGTC 2 cut(s) 601, 816
BtsCI GGATG 2 cut(s) 284, 325
BtsI GCAGTG 1 cut(s) 208
BtsIMutI CAGTG 4 cut(s) 208, 283, 369, 433
Cac8I GCNNGC 1 cut(s) 931
CfoI GCGC 2 cut(s) 573, 788
Cfr10I RCCGGY 3 cut(s) 782, 936, 1180
Cfr13I GGNCC 2 cut(s) 664, 909
Cfr42I CCGCGG 1 cut(s) 792
CseI GACGC 2 cut(s) 679, 743
Csp6I GTAC 3 cut(s) 246, 343, 919
CspAI ACCGGT 1 cut(s) 936
CviAII CATG 3 cut(s) 482, 660, 991
CviQI GTAC 3 cut(s) 246, 343, 919
DdeI CTNAG 2 cut(s) 93, 250
DinI GGCGCC 2 cut(s) 572, 787
DpnI GATC 1 cut(s) 190
DpnII GATC 1 cut(s) 188
DraI TTTAAA 1 cut(s) 700
EaeI YGGCCR 2 cut(s) 292, 1178
EagI CGGCCG 1 cut(s) 1178
EciI GGCGGA 1 cut(s) 700
EclXI CGGCCG 1 cut(s) 1178
Eco130I CCWWGG 1 cut(s) 888
Eco47I GGWCC 2 cut(s) 664, 909
Eco52I CGGCCG 1 cut(s) 1178
Eco57I CTGAAG 1 cut(s) 69
Eco72I CACGTG 1 cut(s) 761
EcoRII CCWGG 1 cut(s) 587
EcoT14I CCWWGG 1 cut(s) 888
EgeI GGCGCC 2 cut(s) 572, 787
EheI GGCGCC 2 cut(s) 572, 787
ErhI CCWWGG 1 cut(s) 888
Esp3I CGTCTC 1 cut(s) 616
FaeI CATG 3 cut(s) 485, 663, 994
FalI AAGNNNNNCTT 2 cut(s) 121, 153
FaqI GGGAC 6 cut(s) 18, 106, 416, 677, 1001, 1029
FatI CATG 3 cut(s) 481, 659, 990
FblI GTMKAC 2 cut(s) 603, 777
Fnu4HI GCNGC 4 cut(s) 789, 1178, 1200, 1258
FokI GGATG 2 cut(s) 271, 312
Fsp4HI GCNGC 4 cut(s) 789, 1178, 1200, 1258
FspBI CTAG 3 cut(s) 620, 860, 1118
GlaI GCGC 2 cut(s) 572, 787
GluI GCNGC 4 cut(s) 789, 1178, 1200, 1258
GsaI CCCAGC 2 cut(s) 127, 369
GsuI CTGGAG 1 cut(s) 49
HaeII RGCGCY 2 cut(s) 574, 789
HaeIII GGCC 2 cut(s) 294, 1180
HapII CCGG 7 cut(s) 81, 568, 667, 783, 924, 937, 1181
HgaI GACGC 2 cut(s) 679, 743
HhaI GCGC 2 cut(s) 573, 788
Hin1I GRCGYC 3 cut(s) 571, 735, 786
Hin1II CATG 3 cut(s) 485, 663, 994
Hin6I GCGC 2 cut(s) 571, 786
HinP1I GCGC 2 cut(s) 571, 786
HincII GTYRAC 1 cut(s) 604
HindII GTYRAC 1 cut(s) 604
HindIII AAGCTT 1 cut(s) 535
HinfI GANTC 7 cut(s) 41, 53, 95, 453, 710, 1217, 1235
HpaII CCGG 7 cut(s) 81, 568, 667, 783, 924, 937, 1181
HphI GGTGA 5 cut(s) 194, 425, 980, 1195, 1244
Hpy166II GTNNAC 6 cut(s) 202, 585, 595, 604, 778, 813
Hpy188I TCNGA 6 cut(s) 94, 289, 452, 694, 904, 1222
Hpy188III TCNNGA 3 cut(s) 261, 457, 860
Hpy8I GTNNAC 6 cut(s) 202, 585, 595, 604, 778, 813
Hpy99I CGWCG 6 cut(s) 293, 605, 638, 734, 737, 908
HpyAV CCTTC 5 cut(s) 147, 156, 165, 339, 1160
HpyCH4III ACNGT 5 cut(s) 278, 342, 373, 527, 610
HpyCH4IV ACGT 5 cut(s) 558, 600, 760, 770, 815
HpyCH4V TGCA 5 cut(s) 213, 562, 585, 595, 1199
HpyF10VI GCNNNNNNNGC 3 cut(s) 568, 743, 884
HpyF3I CTNAG 2 cut(s) 93, 250
HpySE526I ACGT 5 cut(s) 558, 600, 760, 770, 815
Hsp92I GRCGYC 3 cut(s) 571, 735, 786
Hsp92II CATG 3 cut(s) 485, 663, 994
HspAI GCGC 2 cut(s) 571, 786
KasI GGCGCC 2 cut(s) 570, 785
KspI CCGCGG 1 cut(s) 792
Kzo9I GATC 1 cut(s) 188
LmnI GCTCC 1 cut(s) 74
Lsp1109I GCAGC 2 cut(s) 1211, 1269
MaeI CTAG 3 cut(s) 620, 860, 1118
MaeII ACGT 5 cut(s) 558, 600, 760, 770, 815
MaeIII GTNAC 4 cut(s) 29, 748, 761, 1169
MalI GATC 1 cut(s) 190
MbiI CCGCTC 1 cut(s) 617
MboI GATC 1 cut(s) 188
MboII GAAGA 5 cut(s) 62, 77, 532, 535, 832
MhlI GDGCHC 3 cut(s) 433, 587, 597
MluCI AATT 1 cut(s) 173
Mly113I GGCGCC 2 cut(s) 571, 786
MlyI GAGTC 3 cut(s) 104, 462, 719
MmeI TCCRAC 6 cut(s) 192, 312, 654, 832, 927, 1143
MseI TTAA 4 cut(s) 59, 699, 897, 1275
MslI CAYNNNNRTG 2 cut(s) 590, 995
MspA1I CMGCKG 3 cut(s) 791, 878, 1202
MspI CCGG 7 cut(s) 81, 568, 667, 783, 924, 937, 1181
MspR9I CCNGG 1 cut(s) 589
Mva1269I GAATGC 1 cut(s) 889
MvaI CCWGG 1 cut(s) 589
MvnI CGCG 1 cut(s) 791
MwoI GCNNNNNNNGC 3 cut(s) 568, 743, 884
NarI GGCGCC 2 cut(s) 571, 786
NdeII GATC 1 cut(s) 188
NlaIII CATG 3 cut(s) 485, 663, 994
NlaIV GGNNCC 6 cut(s) 572, 665, 787, 910, 928, 1296
NmuCI GTSAC 3 cut(s) 29, 761, 1169
OliI CACNNNNGTG 1 cut(s) 590
PcsI WCGNNNNNNNCGW 2 cut(s) 606, 729
PctI GAATGC 1 cut(s) 889
PfeI GAWTC 4 cut(s) 41, 53, 1217, 1235
PflFI GACNNNGTC 1 cut(s) 608
PinAI ACCGGT 1 cut(s) 936
PkrI GCNGC 4 cut(s) 790, 1179, 1201, 1259
PleI GAGTC 3 cut(s) 103, 461, 718
PluTI GGCGCC 2 cut(s) 574, 789
PmaCI CACGTG 1 cut(s) 761
PmlI CACGTG 1 cut(s) 761
PpsI GAGTC 3 cut(s) 103, 461, 718
Ppu21I YACGTR 2 cut(s) 559, 761
Psp1406I AACGTT 1 cut(s) 770
Psp6I CCWGG 1 cut(s) 587
PspCI CACGTG 1 cut(s) 761
PspFI CCCAGC 2 cut(s) 123, 365
PspGI CCWGG 1 cut(s) 587
PspN4I GGNNCC 6 cut(s) 572, 665, 787, 910, 928, 1296
PspPI GGNCC 2 cut(s) 664, 909
PstI CTGCAG 1 cut(s) 1201
PsyI GACNNNGTC 1 cut(s) 608
PvuII CAGCTG 2 cut(s) 878, 1202
RsaI GTAC 3 cut(s) 247, 344, 920
RsaNI GTAC 3 cut(s) 246, 343, 919
RseI CAYNNNNRTG 2 cut(s) 590, 995
SacII CCGCGG 1 cut(s) 792
SalI GTCGAC 1 cut(s) 602
SaqAI TTAA 4 cut(s) 59, 699, 897, 1275
SatI GCNGC 4 cut(s) 789, 1178, 1200, 1258
Sau3AI GATC 1 cut(s) 188
Sau96I GGNCC 2 cut(s) 664, 909
SchI GAGTC 3 cut(s) 104, 462, 719
ScrFI CCNGG 1 cut(s) 589
SduI GDGCHC 3 cut(s) 433, 587, 597
SfcI CTRYAG 1 cut(s) 1197
SfoI GGCGCC 2 cut(s) 572, 787
Sfr303I CCGCGG 1 cut(s) 792
SgrAI CRCCGGYG 1 cut(s) 782
SgrBI CCGCGG 1 cut(s) 792
SinI GGWCC 2 cut(s) 664, 909
SmiMI CAYNNNNRTG 2 cut(s) 590, 995
Sse9I AATT 1 cut(s) 173
SsiI CCGC 8 cut(s) 409, 615, 685, 789, 791, 978, 1028, 1177
SspDI GGCGCC 2 cut(s) 570, 785
SspMI CTAG 3 cut(s) 620, 860, 1118
StyD4I CCNGG 1 cut(s) 587
StyI CCWWGG 1 cut(s) 888
TaaI ACNGT 5 cut(s) 278, 342, 373, 527, 610
TaiI ACGT 5 cut(s) 561, 603, 763, 773, 818
TaqI TCGA 2 cut(s) 603, 941
TaqII GACCGA 1 cut(s) 488
TasI AATT 1 cut(s) 173
TatI WGTACW 2 cut(s) 342, 918
TauI GCSGC 2 cut(s) 791, 1180
TfiI GAWTC 4 cut(s) 41, 53, 1217, 1235
Tru1I TTAA 4 cut(s) 59, 699, 897, 1275
Tru9I TTAA 4 cut(s) 59, 699, 897, 1275
TscAI CASTG 4 cut(s) 215, 283, 376, 433
TseFI GTSAC 3 cut(s) 29, 761, 1169
TseI GCWGC 2 cut(s) 1199, 1257
Tsp45I GTSAC 3 cut(s) 29, 761, 1169
TspDTI ATGAA 4 cut(s) 147, 498, 648, 1293
TspGWI ACGGA 3 cut(s) 643, 780, 901
TspRI CASTG 4 cut(s) 215, 283, 376, 433
Tth111I GACNNNGTC 1 cut(s) 608
VneI GTGCAC 2 cut(s) 583, 593
VpaK11BI GGWCC 2 cut(s) 664, 909
XbaI TCTAGA 1 cut(s) 859
XmiI GTMKAC 2 cut(s) 603, 777
XspI CTAG 3 cut(s) 620, 860, 1118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.