Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0007590

Physical Location & Seq

Genomic Coordinates Forward (+)

7468511 .. 7471089

Gene Structure 2579 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1104400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1374 bp

ATGGGAGGAAAAAGCTCGAAAGATTCAAGTGTGAGACAGTGTTCGCACAGAGGATCAACTGCAACCTCTTCATGGAATCAGCATGGCTACTCTGAGCCATCACACCCTCCACACAACCCGTATTATACACCGCAGCATCGCTACACTCCTTCGCCATCTTTTAACCGTGTGTCTCAGCCAGTTACAGCTCCCCAGCATCGAAGGACTTTGCATAAAAGTTACTCAAGGATTGCTGATAATTATCGTTCTTTGGATGAGGTTACTACTGCTCTTGCACAAGCTGGCCTAGAGTCGTCTAATCTGATAGTTGGTATTGATTTCACAAAGAGCAATGAGTGGACAGGTTCGAGGTCATTTCACCGGAAAAGCTTGCATCACATTGGAAATGCTCAAAATCCTTATGAACAAGCGATCTCAATTATCGGGAAAACAATATCTGTCTTTGATGAAGATAACCTGATTCCGTGCTTTGGATTTGGAGATGCATCTACACATGACCAAGACGTCTTCAGTTTCTACGAGGACGACATACACTGTAATGGGTTCGAGGAAGTATTGACGCGATATAGAGAGATCGTTCCCCATCTTCGACTTGCAGGACCTACATCTTTTGCACCCATTATTGAGATGGCCATGACTATTGTCGAGGAAAGCGGAGGCCAGTACCATGTCTTACTGATCATTGCCGATGGGCAGGTGACAAGAAGTGTTGATACGCATCATGGTCATCTCAGCTCACAAGAACAAAAGACAGTTGATGCAATTGTAAAAGCAAGCGAGTACCCATTGTCTATAGTCTTAGTGGGAATCGGAGATGGCCCTTGGGACATGATGAGGGAATTCGACGACAATATTCCTGCTCGAGCATTTGATAATTTTCAGTTTGTGAATTTTACCGAAATCATGTCAAGGAATGTGGATCTATCCAGGAAACGGACAGAGTTTGCTCTTGCAGCCTTGATGGAAATACCTTCTCAGTACAAAGCAACCCTAGAGCTTGGAATATTGGGAGCGCGCAACGGGAATTGTCCAAACAAGGTTCCCCTCCCTCCACCCCATGACGGTGCAGTCTCAGCAGGCAGCAACTCAAGACGGTTCAGCTCGAGCGATAGTTTTCAGCAGAGATCAGCTCCTTATGCTGGATATAACTCAGGAGCCAGCACACCTTCTCATCCAGGATATGCTGGATATAATGCAGGAGCCAGCGCACCATCTTATACGGATTATGATAGTCAGGTTTGCCCTATTTGTCTTACTAATCCAAAAGACATGGCCTTTGGATGTGGGCACCAGACTTGTTGCGACTGCGGAGAAGACCTTCAATCGTGCCCGATTTGCCGGAGCGGAATCCAAACTAGAATAAGACTCTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009308 GO:0009690 GO:0009850 GO:0009987 GO:0010817 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0034754 GO:0036211 GO:0042445 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046483 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0065007 GO:0065008 GO:0070647 GO:0071704 GO:0071944 GO:0080134 GO:0080148 GO:0140096 GO:1901564 GO:2000070

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Copine zf-C3HC4_3

Protein Analysis

458

Amino Acids

50.36

Weight (kDa)

6.04

Isoelectric Point (pI)

47.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Copine	PF07002	123 - 336	3.3e-73	Copine
zf-C3HC4_3	PF13920	411 - 452	4.3e-08	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007590)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67800 AT1G67800 AT1G67800 AT1G67800 AT1G67800 AT1G67800
fragaria_vesca	FvH4_4g25370
malus_domestica	MD13G1104400.v1.1 MD16G1104500.v1.1
prunus_persica	Prupe.1G242100_v2.0.a1 Prupe.1G242100_v2.0.a1 Prupe.1G242100_v2.0.a1
pyrus_communis	pycom13g09060
rosa_chinensis	RchiOBHm_Chr4g0432661
rosa_laevigata	RLG00000006825
rosa_multiflora	Rmu_sc0009481.1_g000002
rosa_roxburghii	Rroxscaffold_5G00374120
rosa_rugosa	Rorug04G0261200 Rorug04G0261300
rosa_samantha	Rh4AG315900 Rh4BG323900 Rh4CG338900 Rh4DG319300
rosa_wichuraiana	Rw4G027480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	685
AasI	GACNNNNNNGTC	2 cut(s)	503, 1067
AatII	GACGTC	1 cut(s)	507
Acc36I	ACCTGC	1 cut(s)	685
AccB1I	GGYRCC	1 cut(s)	1287
AccBSI	CCGCTC	1 cut(s)	1344
AccII	CGCG	2 cut(s)	562, 1015
AciI	CCGC	4 cut(s)	131, 654, 1308, 1344
AclWI	GGATC	2 cut(s)	61, 927
AcoI	YGGCCR	1 cut(s)	630
AcsI	RAATTY	2 cut(s)	839, 889
AcuI	CTGAAG	1 cut(s)	493
AcyI	GRCGYC	1 cut(s)	504
AfaI	GTAC	3 cut(s)	665, 782, 980
AfiI	CCNNNNNNNGG	5 cut(s)	72, 470, 933, 1061, 1139
AgsI	TTSAA	2 cut(s)	27, 1322
AjnI	CCWGG	2 cut(s)	926, 1174
AluBI	AGCT	8 cut(s)	15, 188, 281, 369, 735, 997, 1101, 1130
AluI	AGCT	8 cut(s)	15, 188, 281, 369, 735, 997, 1101, 1130
Alw26I	GTCTC	3 cut(s)	28, 177, 1075
AlwI	GGATC	2 cut(s)	61, 927
Ama87I	CYCGRG	2 cut(s)	861, 1102
AoxI	GGCC	5 cut(s)	283, 630, 658, 817, 1272
ApeKI	GCWGC	3 cut(s)	133, 953, 1080
ApoI	RAATTY	2 cut(s)	839, 889
ArsI	GACNNNNNNTTYG	2 cut(s)	1259, 1291
Asp700I	GAANNNNTTC	1 cut(s)	1317
AspLEI	GCGC	3 cut(s)	1015, 1017, 1208
AspS9I	GGNCC	2 cut(s)	599, 818
AsuHPI	GGTGA	2 cut(s)	350, 709
AvaI	CYCGRG	2 cut(s)	861, 1102
AvaII	GGWCC	1 cut(s)	599
BaeGI	GKGCMC	2 cut(s)	1290, 1331
BalI	TGGCCA	1 cut(s)	632
BanI	GGYRCC	1 cut(s)	1287
BarI	GAAGNNNNNNTAC	2 cut(s)	697, 729
BbsI	GAAGAC	2 cut(s)	499, 1320
BbvI	GCAGC	3 cut(s)	145, 965, 1092
BccI	CCATC	8 cut(s)	106, 163, 591, 622, 683, 809, 955, 1219
BciT130I	CCWGG	2 cut(s)	928, 1176
BclI	TGATCA	1 cut(s)	678
BcoDI	GTCTC	3 cut(s)	28, 177, 1075
BfaI	CTAG	4 cut(s)	287, 992, 1356, 1372
BfmI	CTRYAG	1 cut(s)	792
BfuAI	ACCTGC	1 cut(s)	685
BisI	GCNGC	3 cut(s)	134, 954, 1081
BlsI	GCNGC	3 cut(s)	135, 955, 1082
Bme1390I	CCNGG	2 cut(s)	928, 1176
Bme18I	GGWCC	1 cut(s)	599
BmeT110I	CYCGRG	2 cut(s)	861, 1102
BmgT120I	GGNCC	2 cut(s)	599, 818
BmiI	GGNNCC	4 cut(s)	1041, 1156, 1201, 1289
BmrFI	CCNGG	2 cut(s)	928, 1176
BmsI	GCATC	7 cut(s)	145, 205, 382, 472, 494, 727, 748
BoxI	GACNNNNGTC	1 cut(s)	641
BpiI	GAAGAC	2 cut(s)	499, 1320
BplI	GAGNNNNNCTC	2 cut(s)	1114, 1146
BpuEI	CTTGAG	2 cut(s)	208, 1072
BsaBI	GATNNNNATC	2 cut(s)	240, 717
BsaHI	GRCGYC	1 cut(s)	504
BsaJI	CCNNGG	1 cut(s)	821
BsaWI	WCCGGW	1 cut(s)	360
Bsc4I	CCNNNNNNNGG	5 cut(s)	72, 470, 933, 1061, 1139
Bse1I	ACTGG	2 cut(s)	179, 661
Bse3DI	GCAATG	2 cut(s)	337, 681
Bse8I	GATNNNNATC	2 cut(s)	240, 717
BseBI	CCWGG	2 cut(s)	928, 1176
BseDI	CCNNGG	1 cut(s)	821
BseGI	GGATG	3 cut(s)	259, 1171, 1286
BseJI	GATNNNNATC	2 cut(s)	240, 717
BseLI	CCNNNNNNNGG	5 cut(s)	72, 470, 933, 1061, 1139
BseMI	GCAATG	2 cut(s)	337, 681
BseMII	CTCAG	6 cut(s)	84, 188, 745, 989, 1086, 1164
BseNI	ACTGG	2 cut(s)	179, 661
BsePI	GCGCGC	1 cut(s)	1013
BseSI	GKGCMC	2 cut(s)	1290, 1331
BseXI	GCAGC	3 cut(s)	145, 965, 1092
BseYI	CCCAGC	1 cut(s)	192
BsgI	GTGCAG	1 cut(s)	1086
Bsh1236I	CGCG	2 cut(s)	562, 1015
BshFI	GGCC	5 cut(s)	285, 632, 660, 819, 1274
BshNI	GGYRCC	1 cut(s)	1287
BsiHKCI	CYCGRG	2 cut(s)	861, 1102
BsiSI	CCGG	2 cut(s)	361, 1339
BslFI	GGGAC	1 cut(s)	839
BslI	CCNNNNNNNGG	5 cut(s)	72, 470, 933, 1061, 1139
BsmAI	GTCTC	3 cut(s)	28, 177, 1075
BsmFI	GGGAC	1 cut(s)	839
BsnI	GGCC	5 cut(s)	285, 632, 660, 819, 1274
BsoBI	CYCGRG	2 cut(s)	861, 1102
Bsp1286I	GDGCHC	2 cut(s)	1290, 1331
Bsp143I	GATC	6 cut(s)	53, 411, 573, 678, 919, 1124
BspACI	CCGC	4 cut(s)	131, 654, 1308, 1344
BspANI	GGCC	5 cut(s)	285, 632, 660, 819, 1274
BspCNI	CTCAG	6 cut(s)	85, 187, 744, 988, 1085, 1163
BspFNI	CGCG	2 cut(s)	562, 1015
BspLI	GGNNCC	4 cut(s)	1041, 1156, 1201, 1289
BspMI	ACCTGC	1 cut(s)	685
BspPI	GGATC	2 cut(s)	61, 927
BspT107I	GGYRCC	1 cut(s)	1287
BsrBI	CCGCTC	1 cut(s)	1344
BsrDI	GCAATG	2 cut(s)	337, 681
BsrI	ACTGG	2 cut(s)	179, 661
BssECI	CCNNGG	1 cut(s)	821
BssHII	GCGCGC	1 cut(s)	1013
BssMI	GATC	6 cut(s)	53, 411, 573, 678, 919, 1124
BssNI	GRCGYC	1 cut(s)	504
BssT1I	CCWWGG	1 cut(s)	821
Bst2UI	CCWGG	2 cut(s)	928, 1176
Bst4CI	ACNGT	6 cut(s)	39, 167, 536, 754, 1064, 1095
Bst6I	CTCTTC	1 cut(s)	73
BstACI	GRCGYC	1 cut(s)	504
BstC8I	GCNNGC	7 cut(s)	283, 371, 775, 1015, 1078, 1159, 1204
BstDEI	CTNAG	7 cut(s)	93, 174, 731, 799, 975, 1072, 1150
BstF5I	GGATG	3 cut(s)	259, 1171, 1286
BstFNI	CGCG	2 cut(s)	562, 1015
BstHHI	GCGC	3 cut(s)	1015, 1017, 1208
BstKTI	GATC	6 cut(s)	56, 414, 576, 681, 922, 1127
BstMAI	GTCTC	3 cut(s)	28, 177, 1075
BstMBI	GATC	6 cut(s)	53, 411, 573, 678, 919, 1124
BstMWI	GCNNNNNNNGC	4 cut(s)	953, 1073, 1136, 1335
BstNI	CCWGG	2 cut(s)	928, 1176
BstPAI	GACNNNNGTC	1 cut(s)	641
BstSCI	CCNGG	2 cut(s)	926, 1174
BstSFI	CTRYAG	1 cut(s)	792
BstSLI	GKGCMC	2 cut(s)	1290, 1331
BstUI	CGCG	2 cut(s)	562, 1015
BstV1I	GCAGC	3 cut(s)	145, 965, 1092
BstV2I	GAAGAC	2 cut(s)	499, 1320
BstX2I	RGATCY	1 cut(s)	919
BstYI	RGATCY	1 cut(s)	919
BsuRI	GGCC	5 cut(s)	285, 632, 660, 819, 1274
BtgZI	GCGATG	1 cut(s)	122
BtsCI	GGATG	3 cut(s)	259, 1171, 1286
BtsIMutI	CAGTG	2 cut(s)	44, 532
BveI	ACCTGC	1 cut(s)	685
Cac8I	GCNNGC	7 cut(s)	283, 371, 775, 1015, 1078, 1159, 1204
CfoI	GCGC	3 cut(s)	1015, 1017, 1208
Cfr13I	GGNCC	2 cut(s)	599, 818
CseI	GACGC	1 cut(s)	568
Csp6I	GTAC	3 cut(s)	664, 781, 979
CspCI	CAANNNNNGTGG	2 cut(s)	897, 932
CviQI	GTAC	3 cut(s)	664, 781, 979
DdeI	CTNAG	7 cut(s)	93, 174, 731, 799, 975, 1072, 1150
DpnI	GATC	6 cut(s)	55, 413, 575, 680, 921, 1126
DpnII	GATC	6 cut(s)	53, 411, 573, 678, 919, 1124
DrdI	GACNNNNNNGTC	2 cut(s)	503, 1067
DseDI	GACNNNNNNGTC	2 cut(s)	503, 1067
EaeI	YGGCCR	1 cut(s)	630
Eam1104I	CTCTTC	1 cut(s)	73
EarI	CTCTTC	1 cut(s)	73
Eco130I	CCWWGG	1 cut(s)	821
Eco47I	GGWCC	1 cut(s)	599
Eco57I	CTGAAG	1 cut(s)	493
Eco88I	CYCGRG	2 cut(s)	861, 1102
EcoO109I	RGGNCCY	1 cut(s)	599
EcoRI	GAATTC	1 cut(s)	839
EcoRII	CCWGG	2 cut(s)	926, 1174
EcoT14I	CCWWGG	1 cut(s)	821
EcoT22I	ATGCAT	1 cut(s)	487
ErhI	CCWWGG	1 cut(s)	821
FaqI	GGGAC	1 cut(s)	839
FbaI	TGATCA	1 cut(s)	678
Fnu4HI	GCNGC	3 cut(s)	134, 954, 1081
FokI	GGATG	3 cut(s)	266, 1158, 1293
Fsp4HI	GCNGC	3 cut(s)	134, 954, 1081
FspBI	CTAG	4 cut(s)	287, 992, 1356, 1372
GlaI	GCGC	3 cut(s)	1014, 1016, 1207
GluI	GCNGC	3 cut(s)	134, 954, 1081
GsaI	CCCAGC	1 cut(s)	196
HaeIII	GGCC	5 cut(s)	285, 632, 660, 819, 1274
HapII	CCGG	2 cut(s)	361, 1339
HgaI	GACGC	1 cut(s)	568
HhaI	GCGC	3 cut(s)	1015, 1017, 1208
Hin1I	GRCGYC	1 cut(s)	504
Hin6I	GCGC	3 cut(s)	1013, 1015, 1206
HinP1I	GCGC	3 cut(s)	1013, 1015, 1206
HindIII	AAGCTT	1 cut(s)	367
HinfI	GANTC	7 cut(s)	23, 76, 290, 460, 807, 1347, 1365
HpaII	CCGG	2 cut(s)	361, 1339
HphI	GGTGA	2 cut(s)	350, 709
Hpy166II	GTNNAC	1 cut(s)	339
Hpy188I	TCNGA	3 cut(s)	94, 303, 812
Hpy188III	TCNNGA	3 cut(s)	424, 1089, 1152
Hpy8I	GTNNAC	1 cut(s)	339
Hpy99I	CGWCG	1 cut(s)	848
HpyAV	CCTTC	5 cut(s)	159, 195, 981, 1176, 1328
HpyCH4III	ACNGT	6 cut(s)	39, 167, 536, 754, 1064, 1095
HpyCH4IV	ACGT	1 cut(s)	504
HpyF10VI	GCNNNNNNNGC	4 cut(s)	953, 1073, 1136, 1335
HpyF3I	CTNAG	7 cut(s)	93, 174, 731, 799, 975, 1072, 1150
HpySE526I	ACGT	1 cut(s)	504
Hsp92I	GRCGYC	1 cut(s)	504
HspAI	GCGC	3 cut(s)	1013, 1015, 1206
Ksp22I	TGATCA	1 cut(s)	678
Kzo9I	GATC	6 cut(s)	53, 411, 573, 678, 919, 1124
LmnI	GCTCC	6 cut(s)	193, 1010, 1135, 1154, 1199, 1341
Lsp1109I	GCAGC	3 cut(s)	145, 965, 1092
LweI	GCATC	7 cut(s)	145, 205, 382, 472, 494, 727, 748
MaeI	CTAG	4 cut(s)	287, 992, 1356, 1372
MaeII	ACGT	1 cut(s)	504
MaeIII	GTNAC	4 cut(s)	181, 218, 259, 697
MalI	GATC	6 cut(s)	55, 413, 575, 680, 921, 1126
MbiI	CCGCTC	1 cut(s)	1344
MboI	GATC	6 cut(s)	53, 411, 573, 678, 919, 1124
MboII	GAAGA	5 cut(s)	60, 461, 499, 578, 1325
MfeI	CAATTG	1 cut(s)	762
MflI	RGATCY	1 cut(s)	919
MhlI	GDGCHC	2 cut(s)	1290, 1331
MlsI	TGGCCA	1 cut(s)	632
MluCI	AATT	7 cut(s)	238, 417, 762, 839, 874, 889, 1024
MluNI	TGGCCA	1 cut(s)	632
MlyI	GAGTC	2 cut(s)	299, 1359
Mox20I	TGGCCA	1 cut(s)	632
Mph1103I	ATGCAT	1 cut(s)	487
MroXI	GAANNNNTTC	1 cut(s)	1317
MscI	TGGCCA	1 cut(s)	632
MseI	TTAA	1 cut(s)	162
MslI	CAYNNNNRTG	2 cut(s)	537, 1062
Msp20I	TGGCCA	1 cut(s)	632
MspI	CCGG	2 cut(s)	361, 1339
MspR9I	CCNGG	2 cut(s)	928, 1176
MunI	CAATTG	1 cut(s)	762
MvaI	CCWGG	2 cut(s)	928, 1176
MvnI	CGCG	2 cut(s)	562, 1015
MwoI	GCNNNNNNNGC	4 cut(s)	953, 1073, 1136, 1335
NdeII	GATC	6 cut(s)	53, 411, 573, 678, 919, 1124
NlaIV	GGNNCC	4 cut(s)	1041, 1156, 1201, 1289
NmuCI	GTSAC	1 cut(s)	697
NsiI	ATGCAT	1 cut(s)	487
PaeR7I	CTCGAG	2 cut(s)	861, 1102
PaqCI	CACCTGC	1 cut(s)	685
PauI	GCGCGC	1 cut(s)	1013
PdmI	GAANNNNTTC	1 cut(s)	1317
PfeI	GAWTC	5 cut(s)	23, 76, 460, 807, 1347
PfoI	TCCNGGA	2 cut(s)	926, 1174
PkrI	GCNGC	3 cut(s)	135, 955, 1082
PleI	GAGTC	2 cut(s)	298, 1359
PpsI	GAGTC	2 cut(s)	298, 1359
PpuMI	RGGWCCY	1 cut(s)	599
PshAI	GACNNNNGTC	1 cut(s)	641
Psp5II	RGGWCCY	1 cut(s)	599
Psp6I	CCWGG	2 cut(s)	926, 1174
PspFI	CCCAGC	1 cut(s)	192
PspGI	CCWGG	2 cut(s)	926, 1174
PspN4I	GGNNCC	4 cut(s)	1041, 1156, 1201, 1289
PspPI	GGNCC	2 cut(s)	599, 818
PspPPI	RGGWCCY	1 cut(s)	599
PspXI	VCTCGAGB	2 cut(s)	861, 1102
PsuI	RGATCY	1 cut(s)	919
PteI	GCGCGC	1 cut(s)	1013
RsaI	GTAC	3 cut(s)	665, 782, 980
RsaNI	GTAC	3 cut(s)	664, 781, 979
RseI	CAYNNNNRTG	2 cut(s)	537, 1062
SaqAI	TTAA	1 cut(s)	162
SatI	GCNGC	3 cut(s)	134, 954, 1081
Sau3AI	GATC	6 cut(s)	53, 411, 573, 678, 919, 1124
Sau96I	GGNCC	2 cut(s)	599, 818
SchI	GAGTC	2 cut(s)	299, 1359
ScrFI	CCNGG	2 cut(s)	928, 1176
SduI	GDGCHC	2 cut(s)	1290, 1331
SfaNI	GCATC	7 cut(s)	145, 205, 382, 472, 494, 727, 748
SfcI	CTRYAG	1 cut(s)	792
Sfr274I	CTCGAG	2 cut(s)	861, 1102
SinI	GGWCC	1 cut(s)	599
SlaI	CTCGAG	2 cut(s)	861, 1102
SmiMI	CAYNNNNRTG	2 cut(s)	537, 1062
SmlI	CTYRAG	4 cut(s)	223, 861, 1087, 1102
SmoI	CTYRAG	4 cut(s)	223, 861, 1087, 1102
Sse9I	AATT	7 cut(s)	238, 417, 762, 839, 874, 889, 1024
SsiI	CCGC	4 cut(s)	131, 654, 1308, 1344
SspI	AATATT	2 cut(s)	853, 1005
SspMI	CTAG	4 cut(s)	287, 992, 1356, 1372
StyD4I	CCNGG	2 cut(s)	926, 1174
StyI	CCWWGG	1 cut(s)	821
TaaI	ACNGT	6 cut(s)	39, 167, 536, 754, 1064, 1095
TaiI	ACGT	1 cut(s)	507
TaqI	TCGA	9 cut(s)	17, 199, 347, 546, 589, 645, 843, 862, 1103
TasI	AATT	7 cut(s)	238, 417, 762, 839, 874, 889, 1024
TatI	WGTACW	1 cut(s)	978
TfiI	GAWTC	5 cut(s)	23, 76, 460, 807, 1347
Tru1I	TTAA	1 cut(s)	162
Tru9I	TTAA	1 cut(s)	162
TscAI	CASTG	2 cut(s)	44, 539
TseFI	GTSAC	1 cut(s)	697
TseI	GCWGC	3 cut(s)	133, 953, 1080
Tsp45I	GTSAC	1 cut(s)	697
TspDTI	ATGAA	3 cut(s)	60, 417, 462
TspGWI	ACGGA	3 cut(s)	453, 949, 1235
TspRI	CASTG	2 cut(s)	44, 539
VpaK11BI	GGWCC	1 cut(s)	599
XapI	RAATTY	2 cut(s)	839, 889
XcmI	CCANNNNNNNNNTGG	1 cut(s)	625
XhoI	CTCGAG	2 cut(s)	861, 1102
XmnI	GAANNNNTTC	1 cut(s)	1317
XspI	CTAG	4 cut(s)	287, 992, 1356, 1372
ZraI	GACGTC	1 cut(s)	505
Zsp2I	ATGCAT	1 cut(s)	487

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.