Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0007590

Physical Location & Seq

Genomic Coordinates Forward (+)

10821645 .. 10824156

Gene Structure 2512 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000006825

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1302 bp

ATGGGAAGTAGAAGCTCCAAAGAGTCGAGTTCTAGGTTTTCTCATAGTGGTTCAACTGCTTCTTCTTCCTCATGGAATCAGTACCCGGAATCAGTACCATATGCTCAGCAAGGCCCGTATATTGCTACACCTCAGCATCACTATGCACCCTCCTCACAACTGCCAAGGAGGAGACTGGACAGGAAATACTCAAAGATATCTGACGATTATCGCTCCTTGGATGAGGTTACAAATGCTCTTGCACAAGCTGGCCTAGAGTCTTCTAATCTGATTGTTGGCATTGACTTCACAAAGAGCAATGAGTGGACAGGTTCGAGGTCATTTGGTCGGAAAAGCTTGCATCACATTGGAACTGGTCAAAATCCCTATGAACAAGCAATATCGATTATCGGGAAGACATTGTCCGCTTTTGATGAAGATAATCTAATTCCATGCTATGGGTTTGGAGATGCATCTACACATGATCAAGATATCTTCAGCTTCTATCCAGATGACTGCGCTTGCACTGGATTCGAGGAAGTGCTGACACGATATAGAGAAATTGTTCCAACTCTTCGACTTGCAGGACCTACATCTTTTGCACCCATTATTGAGATGGCAATGACTATTGTTGAGCAAAGTGGAGGCCAATACCATGTTTTGCTGATCATTGCCGATGGTCAGGTGACAAGAAGTATTGATACACAACGTGGTCAACTAAGCCCACAAGAACAAAGGACTATTAATGCAATTGTAAGAGCAAGCAATTACCCCTTGTCTATAGCATTAGTCGGGGTAGGAGATGGGCCCTGGGACCTGATGAAGGAATTCGATGACAACATCCCTTCTCGAGCATTTGATAACTTTCAGTTTGTGAATTTTACCGAAATCATGTCAAAGAATGTGGATCTATCGAGAAAGCAGACAGAATTTGCTCTTTCAGCCTTGATGGAAATACCTTCCCAATATAAGGCCACCATAGCGCTAGACCTATTAGGAGTACGAAATGGGAATTCCCCAGACAGAATTCCTCTTCCCCCACCTGCTGCAGTCTCTGCCGTTAGAAACAACACTAGACCTTATACTGGATACGGCTCAAGCAGTTTTCAGCAGCGGACAGCTCCTCCTCATACTGGATATGATGCAGGAGTCAGCGCACCTCCGCATTCAACTTATGATAATCAGGTTTGCCCCATCTGTCTTGCTAATCCGAAAGACATGGCCTTCGGTTGTGGGCATCAGACTTGTTGTGACTGTGGAGAATACCTCCAAGCATGCCCCATTTGCCGGAGTTCAATCCAAACTAGAATAAAACTCTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009308 GO:0009690 GO:0009850 GO:0009987 GO:0010817 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0034754 GO:0036211 GO:0042445 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046483 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0065007 GO:0065008 GO:0070647 GO:0071704 GO:0071944 GO:0080134 GO:0080148 GO:0140096 GO:1901564 GO:2000070

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Copine zf-C3HC4_3

Protein Analysis

434

Amino Acids

47.63

Weight (kDa)

5.82

Isoelectric Point (pI)

50.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Copine	PF07002	112 - 325	1.7e-71	Copine
zf-C3HC4_3	PF13920	387 - 428	1e-07	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007590)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67800 AT1G67800 AT1G67800 AT1G67800 AT1G67800 AT1G67800
fragaria_vesca	FvH4_4g25370
malus_domestica	MD13G1104400.v1.1 MD16G1104500.v1.1
prunus_persica	Prupe.1G242100_v2.0.a1 Prupe.1G242100_v2.0.a1 Prupe.1G242100_v2.0.a1
pyrus_communis	pycom13g09060
rosa_chinensis	RchiOBHm_Chr4g0432661
rosa_laevigata	RLG00000006825
rosa_multiflora	Rmu_sc0009481.1_g000002
rosa_roxburghii	Rroxscaffold_5G00374120
rosa_rugosa	Rorug04G0261200 Rorug04G0261300
rosa_samantha	Rh4AG315900 Rh4BG323900 Rh4CG338900 Rh4DG319300
rosa_wichuraiana	Rw4G027480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1030
Acc36I	ACCTGC	1 cut(s)	1030
AccB7I	CCANNNNNTGG	1 cut(s)	437
AciI	CCGC	3 cut(s)	405, 1093, 1142
AclWI	GGATC	1 cut(s)	894
AcsI	RAATTY	5 cut(s)	806, 856, 908, 991, 1005
AcuI	CTGAAG	1 cut(s)	460
AdeI	CACNNNGTG	1 cut(s)	689
AfaI	GTAC	3 cut(s)	83, 96, 981
AfeI	AGCGCT	1 cut(s)	963
AfiI	CCNNNNNNNGG	6 cut(s)	437, 802, 949, 1064, 1112, 1266
AgsI	TTSAA	3 cut(s)	54, 1149, 1275
AjnI	CCWGG	1 cut(s)	788
AluBI	AGCT	5 cut(s)	15, 248, 336, 480, 1100
AluI	AGCT	5 cut(s)	15, 248, 336, 480, 1100
Alw26I	GTCTC	2 cut(s)	166, 1036
AlwI	GGATC	1 cut(s)	894
AlwNI	CAGNNNCTG	1 cut(s)	1034
Ama87I	CYCGRG	1 cut(s)	828
Aor51HI	AGCGCT	1 cut(s)	963
AoxI	GGCC	6 cut(s)	112, 250, 625, 785, 951, 1200
ApaI	GGGCCC	1 cut(s)	789
ApeKI	GCWGC	2 cut(s)	1025, 1090
ApoI	RAATTY	5 cut(s)	806, 856, 908, 991, 1005
ArsI	GACNNNNNNTTYG	2 cut(s)	1187, 1219
AseI	ATTAAT	1 cut(s)	723
Asp700I	GAANNNNTTC	2 cut(s)	543, 806
AspLEI	GCGC	3 cut(s)	500, 964, 1136
AspS9I	GGNCC	5 cut(s)	113, 566, 785, 786, 793
AsuC2I	CCSGG	1 cut(s)	86
AsuHPI	GGTGA	1 cut(s)	676
AvaI	CYCGRG	1 cut(s)	828
AvaII	GGWCC	2 cut(s)	566, 793
BaeGI	GKGCMC	1 cut(s)	789
BanII	GRGCYC	1 cut(s)	789
BarI	GAAGNNNNNNTAC	2 cut(s)	664, 696
BbsI	GAAGAC	2 cut(s)	252, 401
BbvCI	CCTCAGC	1 cut(s)	132
BbvI	GCAGC	2 cut(s)	1012, 1102
BccI	CCATC	5 cut(s)	589, 650, 776, 922, 1181
BceAI	ACGGC	2 cut(s)	1022, 1087
BcgI	CGANNNNNNTGC	2 cut(s)	493, 527
BciT130I	CCWGG	1 cut(s)	790
BciVI	GTATCC	1 cut(s)	1061
BclI	TGATCA	2 cut(s)	463, 645
BcnI	CCSGG	1 cut(s)	86
BcoDI	GTCTC	2 cut(s)	166, 1036
BfaI	CTAG	5 cut(s)	33, 254, 965, 1053, 1284
BfmI	CTRYAG	2 cut(s)	759, 1026
BfoI	RGCGCY	1 cut(s)	965
BfuAI	ACCTGC	1 cut(s)	1030
BfuI	GTATCC	1 cut(s)	1061
BisI	GCNGC	2 cut(s)	1026, 1091
BlpI	GCTNAGC	1 cut(s)	105
BlsI	GCNGC	2 cut(s)	1027, 1092
Bme1390I	CCNGG	2 cut(s)	86, 790
Bme18I	GGWCC	2 cut(s)	566, 793
BmeT110I	CYCGRG	1 cut(s)	828
BmgT120I	GGNCC	5 cut(s)	113, 566, 785, 786, 793
BmiI	GGNNCC	2 cut(s)	787, 794
BmrFI	CCNGG	2 cut(s)	86, 790
BmsI	GCATC	6 cut(s)	145, 349, 439, 461, 1111, 1225
BpiI	GAAGAC	2 cut(s)	252, 401
BplI	GAGNNNNNCTC	2 cut(s)	1230, 1262
Bpu10I	CCTNAGC	1 cut(s)	132
Bpu1102I	GCTNAGC	1 cut(s)	105
BpuEI	CTTGAG	1 cut(s)	1060
BpuMI	CCSGG	1 cut(s)	86
Bsa29I	ATCGAT	1 cut(s)	383
BsaJI	CCNNGG	4 cut(s)	164, 216, 788, 789
BsaXI	ACNNNNNCTCC	2 cut(s)	1087, 1117
Bsc4I	CCNNNNNNNGG	6 cut(s)	437, 802, 949, 1064, 1112, 1266
Bse1I	ACTGG	5 cut(s)	180, 358, 511, 1069, 1117
Bse3DI	GCAATG	3 cut(s)	304, 606, 648
BseBI	CCWGG	1 cut(s)	790
BseCI	ATCGAT	1 cut(s)	383
BseDI	CCNNGG	4 cut(s)	164, 216, 788, 789
BseGI	GGATG	2 cut(s)	226, 819
BseLI	CCNNNNNNNGG	6 cut(s)	437, 802, 949, 1064, 1112, 1266
BseMI	GCAATG	3 cut(s)	304, 606, 648
BseMII	CTCAG	2 cut(s)	119, 146
BseNI	ACTGG	5 cut(s)	180, 358, 511, 1069, 1117
BseRI	GAGGAG	4 cut(s)	142, 184, 1092, 1095
BseSI	GKGCMC	1 cut(s)	789
BseXI	GCAGC	2 cut(s)	1012, 1102
BshFI	GGCC	6 cut(s)	114, 252, 627, 787, 953, 1202
BshVI	ATCGAT	1 cut(s)	383
BsiHKCI	CYCGRG	1 cut(s)	828
BsiSI	CCGG	2 cut(s)	86, 1267
BslFI	GGGAC	1 cut(s)	806
BslI	CCNNNNNNNGG	6 cut(s)	437, 802, 949, 1064, 1112, 1266
BsmAI	GTCTC	2 cut(s)	166, 1036
BsmFI	GGGAC	1 cut(s)	806
BsmI	GAATGC	1 cut(s)	1144
BsnI	GGCC	6 cut(s)	114, 252, 627, 787, 953, 1202
BsoBI	CYCGRG	1 cut(s)	828
Bsp120I	GGGCCC	1 cut(s)	785
Bsp1286I	GDGCHC	1 cut(s)	789
Bsp143I	GATC	3 cut(s)	463, 645, 886
Bsp1720I	GCTNAGC	1 cut(s)	105
BspACI	CCGC	3 cut(s)	405, 1093, 1142
BspANI	GGCC	6 cut(s)	114, 252, 627, 787, 953, 1202
BspCNI	CTCAG	2 cut(s)	118, 145
BspDI	ATCGAT	1 cut(s)	383
BspLI	GGNNCC	2 cut(s)	787, 794
BspMAI	CTGCAG	1 cut(s)	1030
BspMI	ACCTGC	1 cut(s)	1030
BspPI	GGATC	1 cut(s)	894
BsrDI	GCAATG	3 cut(s)	304, 606, 648
BsrI	ACTGG	5 cut(s)	180, 358, 511, 1069, 1117
BssECI	CCNNGG	4 cut(s)	164, 216, 788, 789
BssMI	GATC	3 cut(s)	463, 645, 886
BssT1I	CCWWGG	2 cut(s)	164, 216
Bst2UI	CCWGG	1 cut(s)	790
Bst4CI	ACNGT	1 cut(s)	1235
Bst6I	CTCTTC	2 cut(s)	558, 1017
BstAPI	GCANNNNNTGC	1 cut(s)	1034
BstC8I	GCNNGC	5 cut(s)	250, 338, 502, 742, 1255
BstDEI	CTNAG	3 cut(s)	105, 132, 698
BstENI	CCTNNNNNAGG	1 cut(s)	800
BstF5I	GGATG	2 cut(s)	226, 819
BstH2I	RGCGCY	1 cut(s)	965
BstHHI	GCGC	3 cut(s)	500, 964, 1136
BstKTI	GATC	3 cut(s)	466, 648, 889
BstMAI	GTCTC	2 cut(s)	166, 1036
BstMBI	GATC	3 cut(s)	463, 645, 886
BstMWI	GCNNNNNNNGC	4 cut(s)	920, 959, 1034, 1263
BstNI	CCWGG	1 cut(s)	790
BstNSI	RCATGY	1 cut(s)	1257
BstSCI	CCNGG	2 cut(s)	84, 788
BstSFI	CTRYAG	2 cut(s)	759, 1026
BstSLI	GKGCMC	1 cut(s)	789
BstV1I	GCAGC	2 cut(s)	1012, 1102
BstV2I	GAAGAC	2 cut(s)	252, 401
BstX2I	RGATCY	1 cut(s)	886
BstYI	RGATCY	1 cut(s)	886
Bsu15I	ATCGAT	1 cut(s)	383
BsuI	GTATCC	1 cut(s)	1061
BsuRI	GGCC	6 cut(s)	114, 252, 627, 787, 953, 1202
BsuTUI	ATCGAT	1 cut(s)	383
BtsCI	GGATG	2 cut(s)	226, 819
BtsIMutI	CAGTG	1 cut(s)	504
BveI	ACCTGC	1 cut(s)	1030
Cac8I	GCNNGC	5 cut(s)	250, 338, 502, 742, 1255
CaiI	CAGNNNCTG	1 cut(s)	1034
CfoI	GCGC	3 cut(s)	500, 964, 1136
Cfr13I	GGNCC	5 cut(s)	113, 566, 785, 786, 793
ClaI	ATCGAT	1 cut(s)	383
Csp6I	GTAC	3 cut(s)	82, 95, 980
CspCI	CAANNNNNGTGG	2 cut(s)	864, 899
CviAII	CATG	7 cut(s)	72, 432, 461, 635, 871, 1198, 1254
CviQI	GTAC	3 cut(s)	82, 95, 980
DdeI	CTNAG	3 cut(s)	105, 132, 698
DpnI	GATC	3 cut(s)	465, 647, 888
DpnII	GATC	3 cut(s)	463, 645, 886
DraIII	CACNNNGTG	1 cut(s)	689
Eam1104I	CTCTTC	2 cut(s)	558, 1017
EarI	CTCTTC	2 cut(s)	558, 1017
Eco130I	CCWWGG	2 cut(s)	164, 216
Eco24I	GRGCYC	1 cut(s)	789
Eco32I	GATATC	2 cut(s)	198, 472
Eco47I	GGWCC	2 cut(s)	566, 793
Eco47III	AGCGCT	1 cut(s)	963
Eco57I	CTGAAG	1 cut(s)	460
Eco88I	CYCGRG	1 cut(s)	828
EcoNI	CCTNNNNNAGG	1 cut(s)	800
EcoO109I	RGGNCCY	3 cut(s)	566, 786, 793
EcoRI	GAATTC	3 cut(s)	806, 991, 1005
EcoRII	CCWGG	1 cut(s)	788
EcoRV	GATATC	2 cut(s)	198, 472
EcoT14I	CCWWGG	2 cut(s)	164, 216
EcoT22I	ATGCAT	1 cut(s)	454
EcoT38I	GRGCYC	1 cut(s)	789
ErhI	CCWWGG	2 cut(s)	164, 216
FaeI	CATG	7 cut(s)	75, 435, 464, 638, 874, 1201, 1257
FaqI	GGGAC	1 cut(s)	806
FatI	CATG	7 cut(s)	71, 431, 460, 634, 870, 1197, 1253
FauNDI	CATATG	1 cut(s)	100
FbaI	TGATCA	2 cut(s)	463, 645
Fnu4HI	GCNGC	2 cut(s)	1026, 1091
FokI	GGATG	2 cut(s)	233, 806
FriOI	GRGCYC	1 cut(s)	789
Fsp4HI	GCNGC	2 cut(s)	1026, 1091
FspBI	CTAG	5 cut(s)	33, 254, 965, 1053, 1284
GlaI	GCGC	3 cut(s)	499, 963, 1135
GluI	GCNGC	2 cut(s)	1026, 1091
HaeII	RGCGCY	1 cut(s)	965
HaeIII	GGCC	6 cut(s)	114, 252, 627, 787, 953, 1202
HapII	CCGG	2 cut(s)	86, 1267
HhaI	GCGC	3 cut(s)	500, 964, 1136
Hin1II	CATG	7 cut(s)	75, 435, 464, 638, 874, 1201, 1257
Hin6I	GCGC	3 cut(s)	498, 962, 1134
HinP1I	GCGC	3 cut(s)	498, 962, 1134
HincII	GTYRAC	1 cut(s)	695
HindII	GTYRAC	1 cut(s)	695
HindIII	AAGCTT	1 cut(s)	334
HinfI	GANTC	6 cut(s)	23, 76, 89, 257, 510, 1128
HpaII	CCGG	2 cut(s)	86, 1267
HphI	GGTGA	1 cut(s)	676
Hpy166II	GTNNAC	2 cut(s)	306, 695
Hpy188I	TCNGA	5 cut(s)	202, 270, 330, 1191, 1221
Hpy188III	TCNNGA	5 cut(s)	391, 467, 488, 828, 894
Hpy8I	GTNNAC	2 cut(s)	306, 695
HpyAV	CCTTC	4 cut(s)	796, 834, 948, 1213
HpyCH4III	ACNGT	1 cut(s)	1235
HpyCH4IV	ACGT	1 cut(s)	688
HpyF10VI	GCNNNNNNNGC	4 cut(s)	920, 959, 1034, 1263
HpyF3I	CTNAG	3 cut(s)	105, 132, 698
HpySE526I	ACGT	1 cut(s)	688
Hsp92II	CATG	7 cut(s)	75, 435, 464, 638, 874, 1201, 1257
HspAI	GCGC	3 cut(s)	498, 962, 1134
Ksp22I	TGATCA	2 cut(s)	463, 645
Kzo9I	GATC	3 cut(s)	463, 645, 886
LmnI	GCTCC	3 cut(s)	20, 218, 1105
Lsp1109I	GCAGC	2 cut(s)	1012, 1102
LweI	GCATC	6 cut(s)	145, 349, 439, 461, 1111, 1225
MaeI	CTAG	5 cut(s)	33, 254, 965, 1053, 1284
MaeII	ACGT	1 cut(s)	688
MaeIII	GTNAC	3 cut(s)	226, 664, 1229
MalI	GATC	3 cut(s)	465, 647, 888
MboI	GATC	3 cut(s)	463, 645, 886
MboII	GAAGA	8 cut(s)	54, 57, 252, 406, 428, 466, 545, 1004
MfeI	CAATTG	1 cut(s)	729
MflI	RGATCY	1 cut(s)	886
MhlI	GDGCHC	1 cut(s)	789
MluCI	AATT	9 cut(s)	426, 540, 729, 745, 806, 856, 908, 991, 1005
MlyI	GAGTC	3 cut(s)	32, 266, 1137
MmeI	TCCRAC	2 cut(s)	308, 572
Mph1103I	ATGCAT	1 cut(s)	454
MroXI	GAANNNNTTC	2 cut(s)	543, 806
MseI	TTAA	1 cut(s)	723
MslI	CAYNNNNRTG	1 cut(s)	141
MspA1I	CMGCKG	1 cut(s)	1093
MspI	CCGG	2 cut(s)	86, 1267
MspR9I	CCNGG	2 cut(s)	86, 790
MunI	CAATTG	1 cut(s)	729
Mva1269I	GAATGC	1 cut(s)	1144
MvaI	CCWGG	1 cut(s)	790
MwoI	GCNNNNNNNGC	4 cut(s)	920, 959, 1034, 1263
NciI	CCSGG	1 cut(s)	86
NdeI	CATATG	1 cut(s)	100
NdeII	GATC	3 cut(s)	463, 645, 886
NlaIII	CATG	7 cut(s)	75, 435, 464, 638, 874, 1201, 1257
NlaIV	GGNNCC	2 cut(s)	787, 794
NmuCI	GTSAC	2 cut(s)	664, 1229
NsiI	ATGCAT	1 cut(s)	454
NspI	RCATGY	1 cut(s)	1257
PaeI	GCATGC	1 cut(s)	1257
PaeR7I	CTCGAG	1 cut(s)	828
PaqCI	CACCTGC	1 cut(s)	1030
PasI	CCCWGGG	1 cut(s)	789
PctI	GAATGC	1 cut(s)	1144
PdmI	GAANNNNTTC	2 cut(s)	543, 806
PfeI	GAWTC	3 cut(s)	76, 89, 510
PflFI	GACNNNGTC	1 cut(s)	400
PflMI	CCANNNNNTGG	1 cut(s)	437
PkrI	GCNGC	2 cut(s)	1027, 1092
PleI	GAGTC	3 cut(s)	31, 265, 1136
PpsI	GAGTC	3 cut(s)	31, 265, 1136
PpuMI	RGGWCCY	2 cut(s)	566, 793
PshBI	ATTAAT	1 cut(s)	723
Psp5II	RGGWCCY	2 cut(s)	566, 793
Psp6I	CCWGG	1 cut(s)	788
PspGI	CCWGG	1 cut(s)	788
PspN4I	GGNNCC	2 cut(s)	787, 794
PspOMI	GGGCCC	1 cut(s)	785
PspPI	GGNCC	5 cut(s)	113, 566, 785, 786, 793
PspPPI	RGGWCCY	2 cut(s)	566, 793
PstI	CTGCAG	1 cut(s)	1030
PstNI	CAGNNNCTG	1 cut(s)	1034
PsuI	RGATCY	1 cut(s)	886
PsyI	GACNNNGTC	1 cut(s)	400
RsaI	GTAC	3 cut(s)	83, 96, 981
RsaNI	GTAC	3 cut(s)	82, 95, 980
RseI	CAYNNNNRTG	1 cut(s)	141
SaqAI	TTAA	1 cut(s)	723
SatI	GCNGC	2 cut(s)	1026, 1091
Sau3AI	GATC	3 cut(s)	463, 645, 886
Sau96I	GGNCC	5 cut(s)	113, 566, 785, 786, 793
SchI	GAGTC	3 cut(s)	32, 266, 1137
ScrFI	CCNGG	2 cut(s)	86, 790
SduI	GDGCHC	1 cut(s)	789
SfaNI	GCATC	6 cut(s)	145, 349, 439, 461, 1111, 1225
SfcI	CTRYAG	2 cut(s)	759, 1026
Sfr274I	CTCGAG	1 cut(s)	828
SinI	GGWCC	2 cut(s)	566, 793
SlaI	CTCGAG	1 cut(s)	828
SmiMI	CAYNNNNRTG	1 cut(s)	141
SmlI	CTYRAG	2 cut(s)	828, 1075
SmoI	CTYRAG	2 cut(s)	828, 1075
SphI	GCATGC	1 cut(s)	1257
Sse9I	AATT	9 cut(s)	426, 540, 729, 745, 806, 856, 908, 991, 1005
SsiI	CCGC	3 cut(s)	405, 1093, 1142
SspMI	CTAG	5 cut(s)	33, 254, 965, 1053, 1284
StyD4I	CCNGG	2 cut(s)	84, 788
StyI	CCWWGG	2 cut(s)	164, 216
TaaI	ACNGT	1 cut(s)	1235
TaiI	ACGT	1 cut(s)	691
TaqI	TCGA	8 cut(s)	26, 314, 383, 513, 556, 810, 829, 893
TasI	AATT	9 cut(s)	426, 540, 729, 745, 806, 856, 908, 991, 1005
TfiI	GAWTC	3 cut(s)	76, 89, 510
Tru1I	TTAA	1 cut(s)	723
Tru9I	TTAA	1 cut(s)	723
TscAI	CASTG	1 cut(s)	511
TseFI	GTSAC	2 cut(s)	664, 1229
TseI	GCWGC	2 cut(s)	1025, 1090
Tsp45I	GTSAC	2 cut(s)	664, 1229
TspDTI	ATGAA	3 cut(s)	384, 429, 815
TspRI	CASTG	1 cut(s)	511
Tth111I	GACNNNGTC	1 cut(s)	400
Van91I	CCANNNNNTGG	1 cut(s)	437
VpaK11BI	GGWCC	2 cut(s)	566, 793
VspI	ATTAAT	1 cut(s)	723
XagI	CCTNNNNNAGG	1 cut(s)	800
XapI	RAATTY	5 cut(s)	806, 856, 908, 991, 1005
XceI	RCATGY	1 cut(s)	1257
XcmI	CCANNNNNNNNNTGG	1 cut(s)	592
XhoI	CTCGAG	1 cut(s)	828
XmnI	GAANNNNTTC	2 cut(s)	543, 806
XspI	CTAG	5 cut(s)	33, 254, 965, 1053, 1284
Zsp2I	ATGCAT	1 cut(s)	454

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.