Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0010895

Physical Location & Seq

Genomic Coordinates Reverse (-)

8897359 .. 8906493

Gene Structure 9135 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1121200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2934 bp

ATGCAATCAGGATATAACATCAATGATCTGTTTCAAGAAGCGCAAACCCGTTGGCTGAAGCCTGTTGAAGTGCTCTTCATATTGCAGAACCATGACAAGTATAAGTTCGCAACGGTGCCCCCGCAACAGCCTAGTAGTGGATCTTTATTTCTTTTTAACAAGAGGATCCTTCGGTTCTTTCGTAGAGATGGGCACCAATGGCGCAAAAAGAAGGATGGACGAACCGTAGGTGAAGCACATGAACGGCTTAAGGTTGGAAATGTCGAAACTTTAAATTGTTATTACGCACATGGAGAGGACAACCCAAGTTTTCAGAGACGTAGCTATTGGATGCTAGATCCGGCCTATGAGCACATTGTTCTTGTGCATTATAGAGAAACTAATGAGGGCAAGCCGAGTACTGGATCTTTCGTACAATCACCAGTATCTTCTTCCTTTAGCCACAGTCCGAGCCCTAATACTACTCATCCAGGCTCTATCTCCATATTTAGTGATTTACGTGAGCCTTATCAGAATCTATCCAGTCCAGGTTCACTAGAAGTTAGTTCAGATATAGTCATCAAGAAAAATGGAAGGGAGAACCCAGAAAATTTATATGGAACGGGGGAGCTAGATAGTTTGACTAAGTTGGATGTTAATCAAGCTTTGCGGCAACTTGAAGAGCAATTAAGCTTAGATGAGGACAGCTTCAAAGGATTTGTGGATGATAATCCAAATGCTTTAGATATCCTGGACTATAGTGATATCGCCAATCAGGATCAGTTTCCTGCCTTCAATGGACCTAAATATGTTGAACATGATCGGTTCTACAATGAACCTGCTCGGATGCAAGGTAATGCAGACTATAGTGGGGAGCATCAAATTGTTGACCGTGAATTCAAAGACGGTAACAAAGAATCTGCTACTTGGAAGGAGTTTCTGGATCCACATAAGATTTCATCAGTCCTAAAGTCCGAGGAGAAATCTTTATATATATTGGACAGAAATGAAAACCCGGCCTCTTCCTCGAGTGGACCAACTGAAGTGCAGGAGCATTGTCAGTGGCTAAATTACAAAGGAAATATTGTTGACAATTATTCCTTGCCACTGCCACAAGAAGTTGACAGTTTCAATCTTTCTCCGTATTCTTCTGTGACTGGAACACATTCGGACTATTATACACAGTTGTTTGAGCAAGGCCAGATAGGATCTCTTGAATCTGATGTTAGTTTGACTGTTGCACAAAATCAAAAGTTCACAATTCGGGAAATATCTCCAGAGTGGGGTTATGCCACTGAAGCGACAAAGGTCATCATTATTGGATCTTTTCTGTGTGACCCATCAGAATCTGCATGGACATGTATGTTTGGTGACGTTGAGGTCCCTGCTCAGATCATTCAGGAAGGTGTAATCCGTTGTGAAGCTCCTCCTCACCTTCCGGGAAAGGTTACTGTCTGCGTTACTGCTGGAAATCGGGCGTCTTGCAGTGAAGTCAGGGAGTTTGAGTATCGAGTTAAGAGCAGTAGCTATACTCACAATAATTCACCTCCACAAGAAGCTGCTAAGAGTGCTGAAGAGCTGTTATTACTAGTTAGATTCGTTCAGATGCTTATGTATGATTCATCAGTGCAGAAAGGGGACAGCGTTGGGTCTGAGTCCTTGAGGAAATTGAAAGCTGATGATGATTCATGGGGTACTATCATTGAATCCCTGTTACTCGGCAATGGAAGTACATCTACCACCATATATTGGCTTTTGGAAGAGCTACTGAAAGACAAGTTGCAGCAATGGCTTTCTTCCAGATCCCATGAATTTGACCAGTATGGATGTTGCTTGTCCAAGAAAGAGCAAGGGATAATACACATGGTTGCTGGTTTGGGATTTGAGTGGGCCTTAAACCCGATACTTAATTGTGGAGTCAATATAAATTTCCGCGACATAAACGGATGGACTGCTCTACATTGGGCTGCTCGTTTTGGAAGGGAAAAGATGGTTGCCGTACTTGTAGCTTCTGGTGCATCAGCTGGAGCGGTGACAGATCCCAGTTCCCAAGATCCAGTTGGAAAAACTGCGGCATCTATTGCAGCCATCAATGGGCATAAGGGACTTGCAGGTTATCTTTCAGAGCTGTCACTGACTAGCCATCTGTCCTCCCTTACACTGGAAGAAAGTGAGTTTTCCAAAGGTTCAGCTGAGGTTGAAGCAGAAATAACAGTAAACAGCATCTCAAATAGAAGCCTCGAGGGCAGTGAGGACCAGGTGTCACTTAAAAACACCTTGGCTGCAGTCCGGAATGCAGCCATGGCTGCAGCACGCATACAGTCTGCTTTCCGGGCGCATTCTTTCAGAAAACGGCAACAGAAAGAAGCTGGTGTTAGTATAGATGACTATGGTATCAGTTCAGCTGACATTCCAGGGCTTTCAGCGTGTTCAAAGCTAAGCTTTCGCAATCTGCGTGATTACAATTCAGCTGCAGTATCTATTCAAAAGAAATATCGCGGGTATAAAGGCCGCAAAGATTTCCTCGTTCTCCGCCAGAAAGTTGTGAAGATACAGGCGCATGTGAGAGGTTATCAGGTGAGGAAGCACTACAAGGTAATTTGCTGGGCTGTTGGAATTCTGGACAAGGTTGTACTAAGGTGGCGTAGGAAAGGAGCTGGTTTACGTGGCTTTAGGCTGGAGACAGAGACTGATGAAGAAAGTGAAGATGAAGATATTCTCAAGGTGTTCCGCAAACAAAAAGTCAATGTAGCCATTGAGGAGGCAGTCTCGCGTGTGCTGTCCATGGTCGAGTCTCCTAAGGCACGCCAGCAATATCATCGCATGCTGACGAGGTACCATCAAGCTAAGGCTGAACTAGGAGGCACTAGCGGTGAAGGTGCTGAAGCAGATGCACCAAATTCCGGTGGCGATGACTTGAGTGTAGACGACATTGATATGTACCTATTTCCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000982 GO:0001077 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_2 Ank_4 CG-1 IQ TIG

Protein Analysis

978

Amino Acids

109.23

Weight (kDa)

5.68

Isoelectric Point (pI)

42.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CG-1	PF03859	13 - 126	4e-48	CG-1 domain
TIG	PF01833	413 - 496	1.8e-09	IPT/TIG domain
Ank_2	PF12796	614 - 701	1.9e-09	Ankyrin repeats (3 copies)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010895)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67310
fragaria_vesca	FvH4_4g23551 FvH4_4g23551
malus_domestica	MD13G1121200.v1.1 MD16G1121200.v1.1
prunus_persica	Prupe.1G224000_v2.0.a1 Prupe.1G224000_v2.0.a1 Prupe.1G224000_v2.0.a1
pyrus_communis	pycom13g10550 pycom16g10390
rosa_chinensis	RchiOBHm_Chr4g0429961
rosa_laevigata	RLG00000007017
rosa_multiflora	Rmu_ssc0000150.1_g000038
rosa_roxburghii	Rroxscaffold_5G00371790
rosa_rugosa	Rorug04G0239700
rosa_samantha	Rh4AG296100 Rh4BG302600 Rh4CG318100 Rh4DG299900
rosa_wichuraiana	Rw4G025650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1358
AbsI	CCTCGAGG	1 cut(s)	2219
Acc36I	ACCTGC	2 cut(s)	826, 2081
Acc65I	GGTACC	1 cut(s)	2814
AccB1I	GGYRCC	3 cut(s)	115, 192, 2814
AccB7I	CCANNNNNTGG	1 cut(s)	1728
AccBSI	CCGCTC	1 cut(s)	2009
AccI	GTMKAC	1 cut(s)	2904
AccII	CGCG	3 cut(s)	1914, 2478, 2752
AccIII	TCCGGA	1 cut(s)	2268
AcsI	RAATTY	6 cut(s)	589, 875, 1790, 1906, 2595, 2878
AcuI	CTGAAG	5 cut(s)	77, 1041, 1296, 1572, 2883
AcyI	GRCGYC	1 cut(s)	1457
AfaI	GTAC	8 cut(s)	400, 414, 1675, 1711, 1980, 2613, 2816, 2921
AfiI	CCNNNNNNNGG	7 cut(s)	137, 401, 1262, 1728, 2073, 2140, 2882
AflII	CTTAAG	1 cut(s)	248
AflIII	ACRYGT	1 cut(s)	1337
AhdI	GACNNNNNGTC	1 cut(s)	2239
AhlI	ACTAGT	1 cut(s)	1567
AjnI	CCWGG	5 cut(s)	469, 526, 729, 2235, 2392
Alw21I	GWGCWC	2 cut(s)	75, 354
Alw26I	GTCTC	5 cut(s)	310, 2654, 2660, 2752, 2778
AlwNI	CAGNNNCTG	2 cut(s)	1328, 2669
Ama87I	CYCGRG	2 cut(s)	1006, 2219
Aor13HI	TCCGGA	1 cut(s)	2268
AoxI	GGCC	5 cut(s)	342, 996, 1177, 1869, 2488
ApeKI	GCWGC	9 cut(s)	1538, 1762, 1946, 2063, 2261, 2276, 2285, 2288, 2450
ApoI	RAATTY	6 cut(s)	589, 875, 1790, 1906, 2595, 2878
ArsI	GACNNNNNNTTYG	2 cut(s)	2706, 2738
Asp700I	GAANNNNTTC	2 cut(s)	1144, 2694
Asp718I	GGTACC	1 cut(s)	2814
AspLEI	GCGC	4 cut(s)	43, 204, 2317, 2539
AspS9I	GGNCC	5 cut(s)	779, 1013, 1360, 1869, 2233
AsuC2I	CCSGG	3 cut(s)	995, 1419, 2312
AsuHPI	GGTGA	8 cut(s)	242, 411, 1361, 1403, 1515, 2023, 2569, 2864
AvaI	CYCGRG	2 cut(s)	1006, 2219
AvaII	GGWCC	4 cut(s)	779, 1013, 1360, 2233
AxyI	CCTNAGG	1 cut(s)	2778
BaeGI	GKGCMC	2 cut(s)	120, 195
BaeI	ACNNNNGTAYC	2 cut(s)	2356, 2389
BamHI	GGATCC	2 cut(s)	165, 922
BanI	GGYRCC	3 cut(s)	115, 192, 2814
BanII	GRGCYC	1 cut(s)	455
BarI	GAAGNNNNNNTAC	2 cut(s)	1699, 1731
Bbv12I	GWGCWC	2 cut(s)	75, 354
BbvCI	CCTCAGC	1 cut(s)	2172
BbvI	GCAGC	9 cut(s)	1525, 1774, 1933, 2075, 2248, 2272, 2288, 2300, 2437
BccI	CCATC	8 cut(s)	182, 209, 1327, 1920, 1963, 2075, 2130, 2826
BceAI	ACGGC	3 cut(s)	260, 1961, 2348
BcgI	CGANNNNNNTGC	2 cut(s)	2780, 2814
BciT130I	CCWGG	5 cut(s)	471, 528, 731, 2237, 2394
BcnI	CCSGG	3 cut(s)	995, 1419, 2312
BcoDI	GTCTC	5 cut(s)	310, 2654, 2660, 2752, 2778
BcuI	ACTAGT	1 cut(s)	1567
BfaI	CTAG	8 cut(s)	132, 335, 536, 611, 1568, 2118, 2837, 2847
BfmI	CTRYAG	5 cut(s)	736, 844, 2262, 2286, 2451
BfrI	CTTAAG	1 cut(s)	248
BfuAI	ACCTGC	2 cut(s)	826, 2081
BglI	GCCNNNNNGGC	1 cut(s)	2223
BlpI	GCTNAGC	1 cut(s)	2417
BmcAI	AGTACT	1 cut(s)	400
Bme1390I	CCNGG	8 cut(s)	471, 528, 731, 995, 1419, 2237, 2312, 2394
Bme18I	GGWCC	4 cut(s)	779, 1013, 1360, 2233
BmeRI	GACNNNNNGTC	1 cut(s)	2239
BmeT110I	CYCGRG	2 cut(s)	1006, 2219
BmgT120I	GGNCC	5 cut(s)	779, 1013, 1360, 1869, 2233
BmiI	GGNNCC	6 cut(s)	117, 167, 194, 924, 1362, 2816
BmrFI	CCNGG	8 cut(s)	471, 528, 731, 995, 1419, 2237, 2312, 2394
BmrI	ACTGGG	1 cut(s)	2016
BmsI	GCATC	8 cut(s)	321, 816, 865, 1575, 2006, 2063, 2211, 2860
BmuI	ACTGGG	1 cut(s)	2016
BoxI	GACNNNNGTC	1 cut(s)	1286
BplI	GAGNNNNNCTC	2 cut(s)	2732, 2764
BpmI	CTGGAG	3 cut(s)	1239, 2025, 2678
Bpu10I	CCTNAGC	2 cut(s)	2172, 2826
Bpu1102I	GCTNAGC	1 cut(s)	2417
BpuEI	CTTGAG	3 cut(s)	1660, 2684, 2917
BpuMI	CCSGG	3 cut(s)	995, 1419, 2312
BsaAI	YACGTR	2 cut(s)	500, 2645
BsaBI	GATNNNNATC	2 cut(s)	636, 708
BsaHI	GRCGYC	1 cut(s)	1457
BsaJI	CCNNGG	5 cut(s)	954, 2256, 2280, 2393, 2763
BsaWI	WCCGGW	2 cut(s)	2268, 2882
BsaXI	ACNNNNNCTCC	2 cut(s)	1469, 1499
Bsc4I	CCNNNNNNNGG	7 cut(s)	137, 401, 1262, 1728, 2073, 2140, 2882
Bse1I	ACTGG	8 cut(s)	406, 422, 522, 1141, 1798, 2022, 2036, 2145
Bse21I	CCTNAGG	1 cut(s)	2778
Bse3DI	GCAATG	2 cut(s)	1708, 1772
Bse8I	GATNNNNATC	2 cut(s)	636, 708
BseAI	TCCGGA	1 cut(s)	2268
BseBI	CCWGG	5 cut(s)	471, 528, 731, 2237, 2394
BseDI	CCNNGG	5 cut(s)	954, 2256, 2280, 2393, 2763
BseGI	GGATG	8 cut(s)	220, 336, 466, 637, 709, 831, 1811, 1931
BseJI	GATNNNNATC	2 cut(s)	636, 708
BseLI	CCNNNNNNNGG	7 cut(s)	137, 401, 1262, 1728, 2073, 2140, 2882
BseMI	GCAATG	2 cut(s)	1708, 1772
BseMII	CTCAG	3 cut(s)	1382, 1623, 2163
BseNI	ACTGG	8 cut(s)	406, 422, 522, 1141, 1798, 2022, 2036, 2145
BseRI	GAGGAG	4 cut(s)	971, 1395, 1398, 2753
BseSI	GKGCMC	2 cut(s)	120, 195
BseXI	GCAGC	9 cut(s)	1525, 1774, 1933, 2075, 2248, 2272, 2288, 2300, 2437
BseYI	CCCAGC	1 cut(s)	2583
BsgI	GTGCAG	2 cut(s)	1046, 1628
Bsh1236I	CGCG	3 cut(s)	1914, 2478, 2752
BshFI	GGCC	5 cut(s)	344, 998, 1179, 1871, 2490
BshNI	GGYRCC	3 cut(s)	115, 192, 2814
BsiHKAI	GWGCWC	2 cut(s)	75, 354
BsiHKCI	CYCGRG	2 cut(s)	1006, 2219
BsiSI	CCGG	6 cut(s)	341, 995, 1418, 2269, 2311, 2883
BslFI	GGGAC	3 cut(s)	1346, 1631, 2097
BslI	CCNNNNNNNGG	7 cut(s)	137, 401, 1262, 1728, 2073, 2140, 2882
BsmAI	GTCTC	5 cut(s)	310, 2654, 2660, 2752, 2778
BsmBI	CGTCTC	1 cut(s)	310
BsmFI	GGGAC	3 cut(s)	1346, 1631, 2097
BsmI	GAATGC	2 cut(s)	2278, 2317
BsnI	GGCC	5 cut(s)	344, 998, 1179, 1871, 2490
BsoBI	CYCGRG	2 cut(s)	1006, 2219
Bsp1286I	GDGCHC	5 cut(s)	75, 120, 195, 354, 455
Bsp13I	TCCGGA	1 cut(s)	2268
Bsp1720I	GCTNAGC	1 cut(s)	2417
Bsp19I	CCATGG	2 cut(s)	2280, 2763
BspANI	GGCC	5 cut(s)	344, 998, 1179, 1871, 2490
BspCNI	CTCAG	3 cut(s)	1381, 1624, 2164
BspEI	TCCGGA	1 cut(s)	2268
BspFNI	CGCG	3 cut(s)	1914, 2478, 2752
BspLI	GGNNCC	6 cut(s)	117, 167, 194, 924, 1362, 2816
BspMAI	CTGCAG	3 cut(s)	2266, 2290, 2455
BspMI	ACCTGC	2 cut(s)	826, 2081
BspQI	GCTCTTC	4 cut(s)	80, 654, 1548, 1734
BspT107I	GGYRCC	3 cut(s)	115, 192, 2814
BspTI	CTTAAG	1 cut(s)	248
BsrBI	CCGCTC	1 cut(s)	2009
BsrDI	GCAATG	2 cut(s)	1708, 1772
BsrI	ACTGG	8 cut(s)	406, 422, 522, 1141, 1798, 2022, 2036, 2145
BssECI	CCNNGG	5 cut(s)	954, 2256, 2280, 2393, 2763
BssNI	GRCGYC	1 cut(s)	1457
BssT1I	CCWWGG	3 cut(s)	2256, 2280, 2763
Bst2UI	CCWGG	5 cut(s)	471, 528, 731, 2237, 2394
Bst6I	CTCTTC	5 cut(s)	80, 654, 1006, 1548, 1734
BstACI	GRCGYC	1 cut(s)	1457
BstAFI	CTTAAG	1 cut(s)	248
BstAPI	GCANNNNNTGC	1 cut(s)	2060
BstBAI	YACGTR	2 cut(s)	500, 2645
BstC8I	GCNNGC	5 cut(s)	392, 2293, 2785, 2789, 2804
BstDSI	CCRYGG	2 cut(s)	2280, 2763
BstF5I	GGATG	8 cut(s)	220, 336, 466, 637, 709, 831, 1811, 1931
BstFNI	CGCG	3 cut(s)	1914, 2478, 2752
BstHHI	GCGC	4 cut(s)	43, 204, 2317, 2539
BstMAI	GTCTC	5 cut(s)	310, 2654, 2660, 2752, 2778
BstNI	CCWGG	5 cut(s)	471, 528, 731, 2237, 2394
BstNSI	RCATGY	3 cut(s)	1341, 2543, 2806
BstPAI	GACNNNNGTC	1 cut(s)	1286
BstSCI	CCNGG	8 cut(s)	469, 526, 729, 993, 1417, 2235, 2310, 2392
BstSFI	CTRYAG	5 cut(s)	736, 844, 2262, 2286, 2451
BstSLI	GKGCMC	2 cut(s)	120, 195
BstUI	CGCG	3 cut(s)	1914, 2478, 2752
BstV1I	GCAGC	9 cut(s)	1525, 1774, 1933, 2075, 2248, 2272, 2288, 2300, 2437
Bsu36I	CCTNAGG	1 cut(s)	2778
BsuRI	GGCC	5 cut(s)	344, 998, 1179, 1871, 2490
BtgI	CCRYGG	2 cut(s)	2280, 2763
BtgZI	GCGATG	2 cut(s)	2783, 2904
BtsCI	GGATG	8 cut(s)	220, 336, 466, 637, 709, 831, 1811, 1931
BtsI	GCAGTG	3 cut(s)	1085, 1471, 2233
BtsIMutI	CAGTG	8 cut(s)	1046, 1085, 1272, 1471, 1611, 2111, 2138, 2233
BveI	ACCTGC	2 cut(s)	826, 2081
Cac8I	GCNNGC	5 cut(s)	392, 2293, 2785, 2789, 2804
CaiI	CAGNNNCTG	2 cut(s)	1328, 2669
CfoI	GCGC	4 cut(s)	43, 204, 2317, 2539
Cfr13I	GGNCC	5 cut(s)	779, 1013, 1360, 1869, 2233
CseI	GACGC	1 cut(s)	1446
CsiI	ACCWGGT	1 cut(s)	2235
Csp6I	GTAC	8 cut(s)	399, 413, 1674, 1710, 1979, 2612, 2815, 2920
CviQI	GTAC	8 cut(s)	399, 413, 1674, 1710, 1979, 2612, 2815, 2920
DraI	TTTAAA	1 cut(s)	273
DrdI	GACNNNNNNGTC	1 cut(s)	1358
DriI	GACNNNNNGTC	1 cut(s)	2239
DseDI	GACNNNNNNGTC	1 cut(s)	1358
Eam1104I	CTCTTC	5 cut(s)	80, 654, 1006, 1548, 1734
Eam1105I	GACNNNNNGTC	1 cut(s)	2239
EarI	CTCTTC	5 cut(s)	80, 654, 1006, 1548, 1734
EciI	GGCGGA	1 cut(s)	2501
Eco130I	CCWWGG	3 cut(s)	2256, 2280, 2763
Eco24I	GRGCYC	1 cut(s)	455
Eco32I	GATATC	2 cut(s)	727, 745
Eco47I	GGWCC	4 cut(s)	779, 1013, 1360, 2233
Eco57I	CTGAAG	5 cut(s)	77, 1041, 1296, 1572, 2883
Eco81I	CCTNAGG	1 cut(s)	2778
Eco88I	CYCGRG	2 cut(s)	1006, 2219
EcoO109I	RGGNCCY	1 cut(s)	1360
EcoRI	GAATTC	2 cut(s)	875, 2595
EcoRII	CCWGG	5 cut(s)	469, 526, 729, 2235, 2392
EcoRV	GATATC	2 cut(s)	727, 745
EcoT14I	CCWWGG	3 cut(s)	2256, 2280, 2763
EcoT38I	GRGCYC	1 cut(s)	455
ErhI	CCWWGG	3 cut(s)	2256, 2280, 2763
Esp3I	CGTCTC	1 cut(s)	310
FalI	AAGNNNNNCTT	2 cut(s)	2405, 2437
FaqI	GGGAC	3 cut(s)	1346, 1631, 2097
FauI	CCCGC	2 cut(s)	129, 2471
FblI	GTMKAC	1 cut(s)	2904
FokI	GGATG	8 cut(s)	227, 343, 453, 644, 716, 838, 1818, 1938
FriOI	GRGCYC	1 cut(s)	455
FspBI	CTAG	8 cut(s)	132, 335, 536, 611, 1568, 2118, 2837, 2847
GlaI	GCGC	4 cut(s)	42, 203, 2316, 2538
GsaI	CCCAGC	1 cut(s)	2587
GsuI	CTGGAG	3 cut(s)	1239, 2025, 2678
HaeIII	GGCC	5 cut(s)	344, 998, 1179, 1871, 2490
HapII	CCGG	6 cut(s)	341, 995, 1418, 2269, 2311, 2883
HgaI	GACGC	1 cut(s)	1446
HhaI	GCGC	4 cut(s)	43, 204, 2317, 2539
Hin1I	GRCGYC	1 cut(s)	1457
Hin6I	GCGC	4 cut(s)	41, 202, 2315, 2537
HinP1I	GCGC	4 cut(s)	41, 202, 2315, 2537
HincII	GTYRAC	3 cut(s)	868, 1069, 1102
HindII	GTYRAC	3 cut(s)	868, 1069, 1102
HindIII	AAGCTT	3 cut(s)	642, 670, 2419
HpaII	CCGG	6 cut(s)	341, 995, 1418, 2269, 2311, 2883
HphI	GGTGA	8 cut(s)	242, 411, 1361, 1403, 1515, 2023, 2569, 2864
Hpy166II	GTNNAC	9 cut(s)	533, 868, 1013, 1069, 1102, 1236, 2197, 2642, 2905
Hpy8I	GTNNAC	9 cut(s)	533, 868, 1013, 1069, 1102, 1236, 2197, 2642, 2905
HpyAV	CCTTC	9 cut(s)	179, 205, 567, 781, 904, 1376, 1424, 1953, 2849
HpyCH4IV	ACGT	4 cut(s)	319, 499, 1353, 2644
HpySE526I	ACGT	4 cut(s)	319, 499, 1353, 2644
Hsp92I	GRCGYC	1 cut(s)	1457
HspAI	GCGC	4 cut(s)	41, 202, 2315, 2537
Kpn2I	TCCGGA	1 cut(s)	2268
KpnI	GGTACC	1 cut(s)	2818
LguI	GCTCTTC	4 cut(s)	80, 654, 1548, 1734
LmnI	GCTCC	6 cut(s)	607, 853, 1030, 1408, 2006, 2633
Lsp1109I	GCAGC	9 cut(s)	1525, 1774, 1933, 2075, 2248, 2272, 2288, 2300, 2437
LweI	GCATC	8 cut(s)	321, 816, 865, 1575, 2006, 2063, 2211, 2860
MabI	ACCWGGT	1 cut(s)	2235
MaeI	CTAG	8 cut(s)	132, 335, 536, 611, 1568, 2118, 2837, 2847
MaeII	ACGT	4 cut(s)	319, 499, 1353, 2644
MbiI	CCGCTC	1 cut(s)	2009
MhlI	GDGCHC	5 cut(s)	75, 120, 195, 354, 455
MlyI	GAGTC	3 cut(s)	1643, 1905, 2780
MmeI	TCCRAC	4 cut(s)	235, 609, 2020, 2572
MroI	TCCGGA	1 cut(s)	2268
MroXI	GAANNNNTTC	2 cut(s)	1144, 2694
MseI	TTAA	9 cut(s)	156, 249, 272, 636, 668, 1494, 1874, 1887, 2247
MslI	CAYNNNNRTG	2 cut(s)	1336, 2915
MspA1I	CMGCKG	4 cut(s)	2003, 2171, 2384, 2450
MspCI	CTTAAG	1 cut(s)	248
MspI	CCGG	6 cut(s)	341, 995, 1418, 2269, 2311, 2883
MspR9I	CCNGG	8 cut(s)	471, 528, 731, 995, 1419, 2237, 2312, 2394
Mva1269I	GAATGC	2 cut(s)	2278, 2317
MvaI	CCWGG	5 cut(s)	471, 528, 731, 2237, 2394
MvnI	CGCG	3 cut(s)	1914, 2478, 2752
NciI	CCSGG	3 cut(s)	995, 1419, 2312
NcoI	CCATGG	2 cut(s)	2280, 2763
NlaIV	GGNNCC	6 cut(s)	117, 167, 194, 924, 1362, 2816
NmeAIII	GCCGAG	2 cut(s)	420, 1677
NmuCI	GTSAC	6 cut(s)	1132, 1313, 1349, 2011, 2109, 2241
NspI	RCATGY	3 cut(s)	1341, 2543, 2806
PaeI	GCATGC	1 cut(s)	2806
PaeR7I	CTCGAG	2 cut(s)	1006, 2219
PciI	ACATGT	1 cut(s)	1337
PciSI	GCTCTTC	4 cut(s)	80, 654, 1548, 1734
PcsI	WCGNNNNNNNCGW	2 cut(s)	178, 2431
PctI	GAATGC	2 cut(s)	2278, 2317
PdmI	GAANNNNTTC	2 cut(s)	1144, 2694
PfeI	GAWTC	8 cut(s)	514, 896, 1196, 1325, 1575, 1598, 1664, 1685
PflMI	CCANNNNNTGG	1 cut(s)	1728
PfoI	TCCNGGA	2 cut(s)	729, 1417
PleI	GAGTC	3 cut(s)	1642, 1904, 2779
PpsI	GAGTC	3 cut(s)	1642, 1904, 2779
Ppu21I	YACGTR	2 cut(s)	500, 2645
PpuMI	RGGWCCY	1 cut(s)	1360
PscI	ACATGT	1 cut(s)	1337
PshAI	GACNNNNGTC	1 cut(s)	1286
Psp5II	RGGWCCY	1 cut(s)	1360
Psp6I	CCWGG	5 cut(s)	469, 526, 729, 2235, 2392
PspFI	CCCAGC	1 cut(s)	2583
PspGI	CCWGG	5 cut(s)	469, 526, 729, 2235, 2392
PspN4I	GGNNCC	6 cut(s)	117, 167, 194, 924, 1362, 2816
PspPI	GGNCC	5 cut(s)	779, 1013, 1360, 1869, 2233
PspPPI	RGGWCCY	1 cut(s)	1360
PspXI	VCTCGAGB	2 cut(s)	1006, 2219
PstI	CTGCAG	3 cut(s)	2266, 2290, 2455
PstNI	CAGNNNCTG	2 cut(s)	1328, 2669
PvuII	CAGCTG	4 cut(s)	2003, 2171, 2384, 2450
RsaI	GTAC	8 cut(s)	400, 414, 1675, 1711, 1980, 2613, 2816, 2921
RsaNI	GTAC	8 cut(s)	399, 413, 1674, 1710, 1979, 2612, 2815, 2920
RseI	CAYNNNNRTG	2 cut(s)	1336, 2915
SapI	GCTCTTC	4 cut(s)	80, 654, 1548, 1734
SaqAI	TTAA	9 cut(s)	156, 249, 272, 636, 668, 1494, 1874, 1887, 2247
Sau96I	GGNCC	5 cut(s)	779, 1013, 1360, 1869, 2233
ScaI	AGTACT	1 cut(s)	400
SchI	GAGTC	3 cut(s)	1643, 1905, 2780
ScrFI	CCNGG	8 cut(s)	471, 528, 731, 995, 1419, 2237, 2312, 2394
SduI	GDGCHC	5 cut(s)	75, 120, 195, 354, 455
SexAI	ACCWGGT	1 cut(s)	2235
SfaNI	GCATC	8 cut(s)	321, 816, 865, 1575, 2006, 2063, 2211, 2860
SfcI	CTRYAG	5 cut(s)	736, 844, 2262, 2286, 2451
Sfr274I	CTCGAG	2 cut(s)	1006, 2219
SinI	GGWCC	4 cut(s)	779, 1013, 1360, 2233
SlaI	CTCGAG	2 cut(s)	1006, 2219
SmiMI	CAYNNNNRTG	2 cut(s)	1336, 2915
SmlI	CTYRAG	6 cut(s)	248, 1006, 1639, 2219, 2699, 2896
SmoI	CTYRAG	6 cut(s)	248, 1006, 1639, 2219, 2699, 2896
SpeI	ACTAGT	1 cut(s)	1567
SphI	GCATGC	1 cut(s)	2806
SspI	AATATT	1 cut(s)	1063
SspMI	CTAG	8 cut(s)	132, 335, 536, 611, 1568, 2118, 2837, 2847
StyD4I	CCNGG	8 cut(s)	469, 526, 729, 993, 1417, 2235, 2310, 2392
StyI	CCWWGG	3 cut(s)	2256, 2280, 2763
TaiI	ACGT	4 cut(s)	322, 502, 1356, 2647
TaqI	TCGA	5 cut(s)	264, 1007, 1489, 2220, 2769
TatI	WGTACW	3 cut(s)	398, 1709, 2611
TauI	GCSGC	3 cut(s)	652, 2054, 2493
TfiI	GAWTC	8 cut(s)	514, 896, 1196, 1325, 1575, 1598, 1664, 1685
Tru1I	TTAA	9 cut(s)	156, 249, 272, 636, 668, 1494, 1874, 1887, 2247
Tru9I	TTAA	9 cut(s)	156, 249, 272, 636, 668, 1494, 1874, 1887, 2247
TscAI	CASTG	8 cut(s)	1046, 1092, 1279, 1471, 1611, 2118, 2145, 2233
TseFI	GTSAC	6 cut(s)	1132, 1313, 1349, 2011, 2109, 2241
TseI	GCWGC	9 cut(s)	1538, 1762, 1946, 2063, 2261, 2276, 2285, 2288, 2450
Tsp45I	GTSAC	6 cut(s)	1132, 1313, 1349, 2011, 2109, 2241
TspGWI	ACGGA	4 cut(s)	1110, 1382, 1938, 2919
TspRI	CASTG	8 cut(s)	1046, 1092, 1279, 1471, 1611, 2118, 2145, 2233
Van91I	CCANNNNNTGG	1 cut(s)	1728
Vha464I	CTTAAG	1 cut(s)	248
VpaK11BI	GGWCC	4 cut(s)	779, 1013, 1360, 2233
XapI	RAATTY	6 cut(s)	589, 875, 1790, 1906, 2595, 2878
XceI	RCATGY	3 cut(s)	1341, 2543, 2806
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2036
XhoI	CTCGAG	2 cut(s)	1006, 2219
XmiI	GTMKAC	1 cut(s)	2904
XmnI	GAANNNNTTC	2 cut(s)	1144, 2694
XspI	CTAG	8 cut(s)	132, 335, 536, 611, 1568, 2118, 2837, 2847
ZrmI	AGTACT	1 cut(s)	400

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.