Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0010895

Physical Location & Seq

Genomic Coordinates Forward (+)

54664331 .. 54670699

Gene Structure 6369 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ39873

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3009 bp

ATGCAATCAGGCTCAGGATATAATATTAATGACCTCTTTCAAGAGGCTCAAAGCCGGTGGCTGAAGCCGGCCGAAGTGCTATTCATATTGCAGAATCATGAGAAGTATAAGGTCACCCCAGAGCCTCCTCAACAACCTGTTAGTGGGTCTTTGTTTCTTTTTAACAAAAGGATCCTTCGGTTTTTCCGTAGAGACGGGCACCGTTGGCGTAAAAAGAAGGATGGGAGAACTGTTGGTGAAGCACATGAACGGCTTAAGGTTGGAAACGTTGAGACGTTGAATTGTTATTATGCGCATGGGGAGGACAATCCGAATTTTCAGAGGCGCAGCTATTGGATGTTGGATCCGGCATATGAGCACATTGTTCTTGTTCATTATAGGGAAATTAGTGAGGTGAAGCCCGGTACAGGATCAAACATACAATCACCAGTTTCCTCTTCTACCCACAGCCAGAGTCCAATCTCGAATACTACACAACATCCAGGATCTGTCTCCATGATTAGTGAGTTGTATGAACCTTATATGAGTCCAGGTTCTGTAGAAGTTAGTTCAGATCTAGTCATCAAGAAAAATGGAAGAGAGAGCGCAGAGAACTTATATAGAACAGGGGAGTCAGATAGTTCATCTAAGGCTGATGTTAGTCAAGCTTTGCGGCGACTAGAGGAGCAGTTAAGTTTAAATGATGATAGCTTCAATGAATTTGTGGATGATAATCCAGATGGTTCAGATATCCCAGAATACCCTAGTGATCAGTTTACTGCCTTCCATGGACAAGAACATATTGTTCACGATCAGTTCTATAGTGGGCATTCTCTGATGCAAGGGAATGCAGACAATAGTTCAGATATCTTGGATTACCATAATGATATCGTCAATCAGGATCAGTTTACTCCCTTCCATGGACCAGAACACATTGTAAATGATCAGTTTTACAGTGGACGTGCTCAGATGCAAAGTAATGTAGACCTTAGTGGTAAACATCATCAATTAATTGGTCATGAATTTGCAGATGGAAACAAAGAATCAGCATCTTGGAAGGAGGTTCTGAATTCATCTAAGACTTCATCAGTTGTGGAGCCCCAGGAGACAGGCTTGTATACATTGGACAGAAGTGAAAAACTATCTTCATCATTGACTGGTCCAAATGGGGTGTTTGAATATCCTTCTTTGTCGCGTCCTCAAGAAGTTGACATTTTCAAGTTGACATTTTCATCTGCAATAGAAACACATTCGGACTACTTTACATCATTTTTTGAGCAAGGACAAATGGGAAATCTTGAATCAGATATCAGTTTGACTGTTGCACAGACGCAAAAATTTACAATTCGGGAAATTTCTCCAGAATGGGGTGATGCCAACGAACCCACAAAGGTCATTGTTATTGGATCTTTTCTGTGCGATCCATCAGAATCCGCATGGACTTGTATGTTTGGCAACGTTGAAGTTCCTGCTCAGATCATTCAGGAAGGCGTAATCCGTTGTGAAGCTCCCCCTCACCTTCCCGGGAAGGTGACACTCTGCATTACTTCAGGCAATCGGGAGTCCTGCAGTGAAGTTAGGGAATTTGAGTATCGCGTTAAGAGCAGTAGATCTACTCCAAATAATTCACCTCCAAAAGAATCTAGTAGGAGTGCAGAAGAACTTTTATTACTTGTCAGATTCGCTCAAATTCTTTTGTCTGATTCATCGGTGCAGAAAAGCGACACTGTTGAGTCTGAGTTTGTGAGAAAATCGAAAGCTGACGATGATACTTGGGGTAGTATTATTGAGGCTCTCTTAGTAGGCAGTGGAAGTTCATCTAGTACCATATATTGGCTTCTGGAAGAGTTTCTAAAAGACAAGTTGGAGCAATGGCTTTCTTCCAGATCCCAGGGACTTGACCAGACAGATTGTTCCTTATCCAGGAAAGAGCAAGGCATGATACACATGGTTGCTGGGTTGGGCTTTGAGTGGGCAATTAACCCAATACTCAATCTTGGAGTCAATATAAATTTCCGGGATATAAACGGGTGGACTGCTCTACATTGGGCTGCGCGTTTTGGAAGGGAAAAGATGGTTGCTGTACTGGTTGCTTCTGGTGCATCAGCTGGAGCAGTGACAGACCCCAGTTCCCAAGATCCCATAGGCAAAACTCCGGCATCTATTGCAGCCATTCATGGGCATAAGGGACTTGCAGGTTATCTTTCAGAGGTGGCACTCACTAGCCATCTGTCATCCCTTACACTGGAAGAAAGTGAGATTTCCAGAAGCTGCGCTGAGATCGAAGCAGAAATAACAGTAAATAGCATCTCAAAGAGTAGCCTGGAGACTTATGAAGATCAAGGCCCCCTTAAGAACACCTTAGCTGCAGTCCGAAATGCAGCACAGGCTGCTGCACGCATACAATCTGCTTTTCGGGCGCATTCTTTCAGAAGACGACAACAGAAAGAAGCTGGTGTTACTATAGATGATTATGGTATCAGTTCAGATGACATACTAGGCCTTTCAGCTATGTCAAGGCTAAACTTTCGTAATCCACGTGATTACAATTCAGCTGCATTATCTATCCAGAAGAAATACCGAGGCTGGAAAGGCCGCAAGGATTTCCTGGCGCTCCGCAAGAAAGTTGTCAAGATACAGGCACATGTGAGAGGTTATCAAGTTAGGAAGCACTACAGGGTAATCTGTTGGGCCGTTGGGATTCTGGACAAAGTTGTACTAAGGTGGCGGAGAAAAGGAGTTGGTCTGCGTGGTTTTCGGAATGAGGCAGAATCCACAGAATCAAGTGAAGACGAAGATATCCTCAAGGTTTTCCGCAAACAGAAAGTCGATGGAGCCATTGACGAGGCTGTCTCGCGGGTTTTGTCCATGGTCGAGTCCCCAGAGGCCCGTGAGCAATATCAGCGCATGCTGGAGAGGTACCATCAAGCTAAGGCTGAATTGGGTAGCACTAGTGGTGAAGCAGGAGCACCAATTTCCCTCGAGGATTTCGTTAAGATGGAAGACATTGATATGTATCAGTTTCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000982 GO:0001077 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_2 Ank_4 CG-1 IQ TIG

Protein Analysis

1002

Amino Acids

112.18

Weight (kDa)

5.58

Isoelectric Point (pI)

49.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CG-1	PF03859	15 - 128	1.2e-48	CG-1 domain
TIG	PF01833	441 - 517	4.1e-08	IPT/TIG domain
Ank_2	PF12796	642 - 729	1.2e-08	Ankyrin repeats (3 copies)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010895)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67310
fragaria_vesca	FvH4_4g23551 FvH4_4g23551
malus_domestica	MD13G1121200.v1.1 MD16G1121200.v1.1
prunus_persica	Prupe.1G224000_v2.0.a1 Prupe.1G224000_v2.0.a1 Prupe.1G224000_v2.0.a1
pyrus_communis	pycom13g10550 pycom16g10390
rosa_chinensis	RchiOBHm_Chr4g0429961
rosa_laevigata	RLG00000007017
rosa_multiflora	Rmu_ssc0000150.1_g000038
rosa_roxburghii	Rroxscaffold_5G00371790
rosa_rugosa	Rorug04G0239700
rosa_samantha	Rh4AG296100 Rh4BG302600 Rh4CG318100 Rh4DG299900
rosa_wichuraiana	Rw4G025650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2828
AbsI	CCTCGAGG	1 cut(s)	2960
Acc16I	TGCGCA	1 cut(s)	294
Acc36I	ACCTGC	1 cut(s)	2165
Acc65I	GGTACC	1 cut(s)	2898
AccB1I	GGYRCC	2 cut(s)	198, 2898
AccB7I	CCANNNNNTGG	1 cut(s)	1812
AccI	GTMKAC	2 cut(s)	963, 1097
AccII	CGCG	4 cut(s)	1174, 1575, 2035, 2836
AciI	CCGC	7 cut(s)	652, 1413, 2575, 2596, 2707, 2794, 2836
AclI	AACGTT	2 cut(s)	267, 1437
AcoI	YGGCCR	1 cut(s)	69
AcsI	RAATTY	9 cut(s)	313, 698, 1001, 1048, 1316, 1332, 1562, 1668, 1990
AcuI	CTGAAG	2 cut(s)	83, 1512
AcvI	CACGTG	1 cut(s)	2519
AfaI	GTAC	5 cut(s)	406, 1804, 2064, 2697, 2900
AfiI	CCNNNNNNNGG	8 cut(s)	143, 407, 899, 1346, 1812, 1902, 2157, 2224
AflII	CTTAAG	2 cut(s)	254, 2330
AflIII	ACRYGT	1 cut(s)	2623
AgsI	TTSAA	8 cut(s)	41, 280, 694, 1157, 1198, 1280, 1442, 3005
AhlI	ACTAGT	1 cut(s)	2930
AjiI	CACGTC	1 cut(s)	941
AjnI	CCWGG	7 cut(s)	481, 529, 1080, 1869, 1901, 2301, 2586
Alw21I	GWGCWC	3 cut(s)	360, 946, 2950
Alw26I	GTCTC	6 cut(s)	186, 266, 496, 1079, 2300, 2836
AlwNI	CAGNNNCTG	3 cut(s)	488, 536, 2250
Ama87I	CYCGRG	2 cut(s)	1502, 2960
AoxI	GGCC	6 cut(s)	69, 2323, 2479, 2572, 2670, 2865
ApeKI	GCWGC	9 cut(s)	327, 2030, 2147, 2250, 2345, 2360, 2369, 2372, 2534
ApoI	RAATTY	9 cut(s)	313, 698, 1001, 1048, 1316, 1332, 1562, 1668, 1990
ArsI	GACNNNNNNTTYG	2 cut(s)	2790, 2822
AseI	ATTAAT	2 cut(s)	27, 989
Asp700I	GAANNNNTTC	1 cut(s)	1827
Asp718I	GGTACC	1 cut(s)	2898
AspLEI	GCGC	8 cut(s)	295, 327, 587, 2035, 2255, 2401, 2593, 2886
AspS9I	GGNCC	5 cut(s)	902, 1139, 2324, 2670, 2866
AsuC2I	CCSGG	4 cut(s)	402, 1503, 1504, 1997
AsuHPI	GGTGA	9 cut(s)	106, 248, 406, 417, 1361, 1487, 1522, 1599, 2948
AvaI	CYCGRG	2 cut(s)	1502, 2960
AvaII	GGWCC	2 cut(s)	902, 1139
BaeGI	GKGCMC	1 cut(s)	201
BamHI	GGATCC	2 cut(s)	171, 343
BanI	GGYRCC	2 cut(s)	198, 2898
BanII	GRGCYC	1 cut(s)	1080
BbrPI	CACGTG	1 cut(s)	2519
BbsI	GAAGAC	3 cut(s)	2419, 2775, 2988
Bbv12I	GWGCWC	3 cut(s)	360, 946, 2950
BbvI	GCAGC	9 cut(s)	339, 2017, 2159, 2237, 2332, 2356, 2359, 2372, 2521
BccI	CCATC	9 cut(s)	215, 713, 1004, 1411, 2047, 2214, 2804, 2910, 2971
BceAI	ACGGC	2 cut(s)	266, 2657
BciT130I	CCWGG	7 cut(s)	483, 531, 1082, 1871, 1903, 2303, 2588
BclI	TGATCA	2 cut(s)	748, 922
BcnI	CCSGG	4 cut(s)	402, 1503, 1504, 1997
BcoDI	GTCTC	6 cut(s)	186, 266, 496, 1079, 2300, 2836
BcuI	ACTAGT	1 cut(s)	2930
BfaI	CTAG	8 cut(s)	557, 659, 744, 1623, 1800, 2202, 2477, 2931
BfmI	CTRYAG	6 cut(s)	537, 799, 1546, 2346, 2442, 2653
BfoI	RGCGCY	1 cut(s)	2594
BfrI	CTTAAG	2 cut(s)	254, 2330
BfuAI	ACCTGC	1 cut(s)	2165
BglII	AGATCT	2 cut(s)	553, 1589
Bme18I	GGWCC	2 cut(s)	902, 1139
BmeT110I	CYCGRG	2 cut(s)	1502, 2960
BmgBI	CACGTC	1 cut(s)	941
BmgT120I	GGNCC	5 cut(s)	902, 1139, 2324, 2670, 2866
BmiI	GGNNCC	7 cut(s)	173, 200, 345, 1077, 2326, 2815, 2900
BmrI	ACTGGG	1 cut(s)	2100
BmsI	GCATC	7 cut(s)	807, 939, 1037, 1342, 2090, 2147, 2295
BmuI	ACTGGG	1 cut(s)	2100
BpiI	GAAGAC	3 cut(s)	2419, 2775, 2988
BplI	GAGNNNNNCTC	2 cut(s)	2816, 2848
BpmI	CTGGAG	4 cut(s)	1323, 2109, 2324, 2912
Bpu10I	CCTNAGC	3 cut(s)	13, 2341, 2910
BpuEI	CTTGAG	2 cut(s)	1164, 2768
BpuMI	CCSGG	4 cut(s)	402, 1503, 1504, 1997
BsaAI	YACGTR	1 cut(s)	2519
BsaBI	GATNNNNATC	2 cut(s)	711, 2994
BsaJI	CCNNGG	8 cut(s)	766, 898, 1080, 1502, 1869, 1870, 2560, 2847
Bsc4I	CCNNNNNNNGG	8 cut(s)	143, 407, 899, 1346, 1812, 1902, 2157, 2224
Bse118I	RCCGGY	2 cut(s)	54, 67
Bse1I	ACTGG	5 cut(s)	428, 1141, 2070, 2106, 2229
Bse3DI	GCAATG	1 cut(s)	1856
Bse8I	GATNNNNATC	2 cut(s)	711, 2994
BseBI	CCWGG	7 cut(s)	483, 531, 1082, 1871, 1903, 2303, 2588
BseDI	CCNNGG	8 cut(s)	766, 898, 1080, 1502, 1869, 1870, 2560, 2847
BseGI	GGATG	5 cut(s)	226, 342, 478, 712, 2213
BseJI	GATNNNNATC	2 cut(s)	711, 2994
BseLI	CCNNNNNNNGG	8 cut(s)	143, 407, 899, 1346, 1812, 1902, 2157, 2224
BseMI	GCAATG	1 cut(s)	1856
BseMII	CTCAG	5 cut(s)	27, 959, 1466, 1707, 2247
BseNI	ACTGG	5 cut(s)	428, 1141, 2070, 2106, 2229
BseRI	GAGGAG	2 cut(s)	117, 677
BseSI	GKGCMC	1 cut(s)	201
BseX3I	CGGCCG	1 cut(s)	69
BseXI	GCAGC	9 cut(s)	339, 2017, 2159, 2237, 2332, 2356, 2359, 2372, 2521
BseYI	CCCAGC	1 cut(s)	1934
BsgI	GTGCAG	3 cut(s)	1653, 1712, 2358
Bsh1236I	CGCG	4 cut(s)	1174, 1575, 2035, 2836
Bsh1285I	CGRYCG	1 cut(s)	72
BshFI	GGCC	6 cut(s)	71, 2325, 2481, 2574, 2672, 2867
BshNI	GGYRCC	2 cut(s)	198, 2898
BsiEI	CGRYCG	1 cut(s)	72
BsiHKAI	GWGCWC	3 cut(s)	360, 946, 2950
BsiHKCI	CYCGRG	2 cut(s)	1502, 2960
BsiSI	CCGG	7 cut(s)	55, 68, 347, 402, 1503, 1996, 2135
BslFI	GGGAC	3 cut(s)	1887, 2181, 2842
BslI	CCNNNNNNNGG	8 cut(s)	143, 407, 899, 1346, 1812, 1902, 2157, 2224
BsmAI	GTCTC	6 cut(s)	186, 266, 496, 1079, 2300, 2836
BsmBI	CGTCTC	2 cut(s)	186, 266
BsmFI	GGGAC	3 cut(s)	1887, 2181, 2842
BsmI	GAATGC	3 cut(s)	808, 832, 2401
BsnI	GGCC	6 cut(s)	71, 2325, 2481, 2574, 2672, 2867
BsoBI	CYCGRG	2 cut(s)	1502, 2960
Bsp1286I	GDGCHC	5 cut(s)	201, 360, 946, 1080, 2950
Bsp19I	CCATGG	3 cut(s)	766, 898, 2847
BspACI	CCGC	7 cut(s)	652, 1413, 2575, 2596, 2707, 2794, 2836
BspANI	GGCC	6 cut(s)	71, 2325, 2481, 2574, 2672, 2867
BspCNI	CTCAG	5 cut(s)	26, 958, 1465, 1708, 2248
BspFNI	CGCG	4 cut(s)	1174, 1575, 2035, 2836
BspHI	TCATGA	2 cut(s)	97, 997
BspLI	GGNNCC	7 cut(s)	173, 200, 345, 1077, 2326, 2815, 2900
BspMAI	CTGCAG	2 cut(s)	1550, 2350
BspMI	ACCTGC	1 cut(s)	2165
BspT107I	GGYRCC	2 cut(s)	198, 2898
BspTI	CTTAAG	2 cut(s)	254, 2330
BsrDI	GCAATG	1 cut(s)	1856
BsrFI	RCCGGY	2 cut(s)	54, 67
BsrI	ACTGG	5 cut(s)	428, 1141, 2070, 2106, 2229
BssAI	RCCGGY	2 cut(s)	54, 67
BssECI	CCNNGG	8 cut(s)	766, 898, 1080, 1502, 1869, 1870, 2560, 2847
BssNAI	GTATAC	1 cut(s)	1098
BssT1I	CCWWGG	3 cut(s)	766, 898, 2847
Bst1107I	GTATAC	1 cut(s)	1098
Bst2UI	CCWGG	7 cut(s)	483, 531, 1082, 1871, 1903, 2303, 2588
Bst4CI	ACNGT	6 cut(s)	203, 232, 935, 1300, 1708, 2278
Bst6I	CTCTTC	3 cut(s)	442, 571, 1818
BstAFI	CTTAAG	2 cut(s)	254, 2330
BstAPI	GCANNNNNTGC	2 cut(s)	2144, 2369
BstBAI	YACGTR	1 cut(s)	2519
BstC8I	GCNNGC	3 cut(s)	69, 2377, 2888
BstDSI	CCRYGG	3 cut(s)	766, 898, 2847
BstEII	GGTNACC	1 cut(s)	112
BstENI	CCTNNNNNAGG	1 cut(s)	1900
BstF5I	GGATG	5 cut(s)	226, 342, 478, 712, 2213
BstFNI	CGCG	4 cut(s)	1174, 1575, 2035, 2836
BstH2I	RGCGCY	1 cut(s)	2594
BstHHI	GCGC	8 cut(s)	295, 327, 587, 2035, 2255, 2401, 2593, 2886
BstMAI	GTCTC	6 cut(s)	186, 266, 496, 1079, 2300, 2836
BstMCI	CGRYCG	1 cut(s)	72
BstMWI	GCNNNNNNNGC	9 cut(s)	205, 1581, 2078, 2144, 2366, 2369, 2396, 2571, 2881
BstNI	CCWGG	7 cut(s)	483, 531, 1082, 1871, 1903, 2303, 2588
BstNSI	RCATGY	2 cut(s)	2627, 2890
BstPI	GGTNACC	1 cut(s)	112
BstSFI	CTRYAG	6 cut(s)	537, 799, 1546, 2346, 2442, 2653
BstSLI	GKGCMC	1 cut(s)	201
BstUI	CGCG	4 cut(s)	1174, 1575, 2035, 2836
BstV1I	GCAGC	9 cut(s)	339, 2017, 2159, 2237, 2332, 2356, 2359, 2372, 2521
BstV2I	GAAGAC	3 cut(s)	2419, 2775, 2988
BstX2I	RGATCY	8 cut(s)	171, 343, 485, 553, 1385, 1589, 1865, 2116
BstYI	RGATCY	8 cut(s)	171, 343, 485, 553, 1385, 1589, 1865, 2116
BstZ17I	GTATAC	1 cut(s)	1098
BstZI	CGGCCG	1 cut(s)	69
BsuRI	GGCC	6 cut(s)	71, 2325, 2481, 2574, 2672, 2867
BtgI	CCRYGG	3 cut(s)	766, 898, 2847
BtrI	CACGTC	1 cut(s)	941
BtsCI	GGATG	5 cut(s)	226, 342, 478, 712, 2213
BtsI	GCAGTG	3 cut(s)	1555, 1792, 2100
BtsIMutI	CAGTG	6 cut(s)	940, 1555, 1704, 1792, 2100, 2222
BveI	ACCTGC	1 cut(s)	2165
Cac8I	GCNNGC	3 cut(s)	69, 2377, 2888
CaiI	CAGNNNCTG	3 cut(s)	488, 536, 2250
CciI	TCATGA	2 cut(s)	97, 997
CfoI	GCGC	8 cut(s)	295, 327, 587, 2035, 2255, 2401, 2593, 2886
Cfr10I	RCCGGY	2 cut(s)	54, 67
Cfr13I	GGNCC	5 cut(s)	902, 1139, 2324, 2670, 2866
Cfr9I	CCCGGG	1 cut(s)	1502
CseI	GACGC	2 cut(s)	1163, 1318
Csp6I	GTAC	5 cut(s)	405, 1803, 2063, 2696, 2899
CspCI	CAANNNNNGTGG	2 cut(s)	38, 73
CviQI	GTAC	5 cut(s)	405, 1803, 2063, 2696, 2899
DraI	TTTAAA	1 cut(s)	678
DrdI	GACNNNNNNGTC	1 cut(s)	2828
DseDI	GACNNNNNNGTC	1 cut(s)	2828
EaeI	YGGCCR	1 cut(s)	69
EagI	CGGCCG	1 cut(s)	69
Eam1104I	CTCTTC	3 cut(s)	442, 571, 1818
EarI	CTCTTC	3 cut(s)	442, 571, 1818
EciI	GGCGGA	1 cut(s)	2722
EclXI	CGGCCG	1 cut(s)	69
Eco130I	CCWWGG	3 cut(s)	766, 898, 2847
Eco147I	AGGCCT	1 cut(s)	2481
Eco24I	GRGCYC	1 cut(s)	1080
Eco32I	GATATC	5 cut(s)	730, 847, 868, 1288, 2779
Eco47I	GGWCC	2 cut(s)	902, 1139
Eco52I	CGGCCG	1 cut(s)	69
Eco57I	CTGAAG	2 cut(s)	83, 1512
Eco72I	CACGTG	1 cut(s)	2519
Eco88I	CYCGRG	2 cut(s)	1502, 2960
Eco91I	GGTNACC	1 cut(s)	112
EcoNI	CCTNNNNNAGG	1 cut(s)	1900
EcoO109I	RGGNCCY	1 cut(s)	2324
EcoO65I	GGTNACC	1 cut(s)	112
EcoRI	GAATTC	1 cut(s)	1048
EcoRII	CCWGG	7 cut(s)	481, 529, 1080, 1869, 1901, 2301, 2586
EcoRV	GATATC	5 cut(s)	730, 847, 868, 1288, 2779
EcoT14I	CCWWGG	3 cut(s)	766, 898, 2847
EcoT38I	GRGCYC	1 cut(s)	1080
ErhI	CCWWGG	3 cut(s)	766, 898, 2847
Esp3I	CGTCTC	2 cut(s)	186, 266
FalI	AAGNNNNNCTT	4 cut(s)	2313, 2345, 2324, 2356
FaqI	GGGAC	3 cut(s)	1887, 2181, 2842
FauI	CCCGC	1 cut(s)	2829
FauNDI	CATATG	1 cut(s)	352
FbaI	TGATCA	2 cut(s)	748, 922
FblI	GTMKAC	2 cut(s)	963, 1097
FokI	GGATG	5 cut(s)	233, 349, 465, 719, 2200
FriOI	GRGCYC	1 cut(s)	1080
FspAI	RTGCGCAY	1 cut(s)	294
FspBI	CTAG	8 cut(s)	557, 659, 744, 1623, 1800, 2202, 2477, 2931
FspI	TGCGCA	1 cut(s)	294
GlaI	GCGC	8 cut(s)	294, 326, 586, 2034, 2254, 2400, 2592, 2885
GsaI	CCCAGC	1 cut(s)	1938
GsuI	CTGGAG	4 cut(s)	1323, 2109, 2324, 2912
HaeII	RGCGCY	1 cut(s)	2594
HaeIII	GGCC	6 cut(s)	71, 2325, 2481, 2574, 2672, 2867
HapII	CCGG	7 cut(s)	55, 68, 347, 402, 1503, 1996, 2135
HgaI	GACGC	2 cut(s)	1163, 1318
HhaI	GCGC	8 cut(s)	295, 327, 587, 2035, 2255, 2401, 2593, 2886
Hin6I	GCGC	8 cut(s)	293, 325, 585, 2033, 2253, 2399, 2591, 2884
HinP1I	GCGC	8 cut(s)	293, 325, 585, 2033, 2253, 2399, 2591, 2884
HincII	GTYRAC	2 cut(s)	1189, 1203
HindII	GTYRAC	2 cut(s)	1189, 1203
HindIII	AAGCTT	1 cut(s)	645
HpaII	CCGG	7 cut(s)	55, 68, 347, 402, 1503, 1996, 2135
HphI	GGTGA	9 cut(s)	106, 248, 406, 417, 1361, 1487, 1522, 1599, 2948
HpyCH4III	ACNGT	6 cut(s)	203, 232, 935, 1300, 1708, 2278
HpyCH4IV	ACGT	5 cut(s)	267, 275, 940, 1437, 2518
HpyF10VI	GCNNNNNNNGC	9 cut(s)	205, 1581, 2078, 2144, 2366, 2369, 2396, 2571, 2881
HpySE526I	ACGT	5 cut(s)	267, 275, 940, 1437, 2518
HspAI	GCGC	8 cut(s)	293, 325, 585, 2033, 2253, 2399, 2591, 2884
KpnI	GGTACC	1 cut(s)	2902
KroI	GCCGGC	1 cut(s)	67
KroNI	GCCGGC	1 cut(s)	69
Ksp22I	TGATCA	2 cut(s)	748, 922
LmnI	GCTCC	8 cut(s)	664, 1075, 1492, 1846, 2090, 2598, 2813, 2945
Lsp1109I	GCAGC	9 cut(s)	339, 2017, 2159, 2237, 2332, 2356, 2359, 2372, 2521
LweI	GCATC	7 cut(s)	807, 939, 1037, 1342, 2090, 2147, 2295
MaeI	CTAG	8 cut(s)	557, 659, 744, 1623, 1800, 2202, 2477, 2931
MaeII	ACGT	5 cut(s)	267, 275, 940, 1437, 2518
MaeIII	GTNAC	4 cut(s)	112, 1510, 2095, 2437
MflI	RGATCY	8 cut(s)	171, 343, 485, 553, 1385, 1589, 1865, 2116
MhlI	GDGCHC	5 cut(s)	201, 360, 946, 1080, 2950
MlyI	GAGTC	7 cut(s)	463, 535, 620, 1550, 1721, 1989, 2864
MmeI	TCCRAC	3 cut(s)	241, 321, 1824
MroNI	GCCGGC	1 cut(s)	67
MroXI	GAANNNNTTC	1 cut(s)	1827
MslI	CAYNNNNRTG	1 cut(s)	2990
MspA1I	CMGCKG	2 cut(s)	2087, 2534
MspCI	CTTAAG	2 cut(s)	254, 2330
MspI	CCGG	7 cut(s)	55, 68, 347, 402, 1503, 1996, 2135
Mva1269I	GAATGC	3 cut(s)	808, 832, 2401
MvaI	CCWGG	7 cut(s)	483, 531, 1082, 1871, 1903, 2303, 2588
MvnI	CGCG	4 cut(s)	1174, 1575, 2035, 2836
MwoI	GCNNNNNNNGC	9 cut(s)	205, 1581, 2078, 2144, 2366, 2369, 2396, 2571, 2881
NaeI	GCCGGC	1 cut(s)	69
NciI	CCSGG	4 cut(s)	402, 1503, 1504, 1997
NcoI	CCATGG	3 cut(s)	766, 898, 2847
NdeI	CATATG	1 cut(s)	352
NgoMIV	GCCGGC	1 cut(s)	67
NlaIV	GGNNCC	7 cut(s)	173, 200, 345, 1077, 2326, 2815, 2900
NmuCI	GTSAC	3 cut(s)	112, 1510, 2095
NsbI	TGCGCA	1 cut(s)	294
NspI	RCATGY	2 cut(s)	2627, 2890
PaeI	GCATGC	1 cut(s)	2890
PaeR7I	CTCGAG	1 cut(s)	2960
PagI	TCATGA	2 cut(s)	97, 997
PasI	CCCWGGG	1 cut(s)	1870
PceI	AGGCCT	1 cut(s)	2481
PciI	ACATGT	1 cut(s)	2623
PcsI	WCGNNNNNNNCGW	3 cut(s)	184, 2515, 2967
PctI	GAATGC	3 cut(s)	808, 832, 2401
PdiI	GCCGGC	1 cut(s)	69
PdmI	GAANNNNTTC	1 cut(s)	1827
PflMI	CCANNNNNTGG	1 cut(s)	1812
PfoI	TCCNGGA	3 cut(s)	481, 1901, 1995
PleI	GAGTC	7 cut(s)	462, 534, 619, 1549, 1720, 1988, 2863
PmaCI	CACGTG	1 cut(s)	2519
PmlI	CACGTG	1 cut(s)	2519
PpsI	GAGTC	7 cut(s)	462, 534, 619, 1549, 1720, 1988, 2863
Ppu21I	YACGTR	1 cut(s)	2519
PscI	ACATGT	1 cut(s)	2623
PshBI	ATTAAT	2 cut(s)	27, 989
Psp1406I	AACGTT	2 cut(s)	267, 1437
Psp6I	CCWGG	7 cut(s)	481, 529, 1080, 1869, 1901, 2301, 2586
PspCI	CACGTG	1 cut(s)	2519
PspEI	GGTNACC	1 cut(s)	112
PspFI	CCCAGC	1 cut(s)	1934
PspGI	CCWGG	7 cut(s)	481, 529, 1080, 1869, 1901, 2301, 2586
PspN4I	GGNNCC	7 cut(s)	173, 200, 345, 1077, 2326, 2815, 2900
PspPI	GGNCC	5 cut(s)	902, 1139, 2324, 2670, 2866
PspXI	VCTCGAGB	1 cut(s)	2960
PsrI	GAACNNNNNNTAC	2 cut(s)	1632, 1664
PstI	CTGCAG	2 cut(s)	1550, 2350
PstNI	CAGNNNCTG	3 cut(s)	488, 536, 2250
PsuI	RGATCY	8 cut(s)	171, 343, 485, 553, 1385, 1589, 1865, 2116
PvuII	CAGCTG	2 cut(s)	2087, 2534
RsaI	GTAC	5 cut(s)	406, 1804, 2064, 2697, 2900
RsaNI	GTAC	5 cut(s)	405, 1803, 2063, 2696, 2899
RseI	CAYNNNNRTG	1 cut(s)	2990
Sau96I	GGNCC	5 cut(s)	902, 1139, 2324, 2670, 2866
SchI	GAGTC	7 cut(s)	463, 535, 620, 1550, 1721, 1989, 2864
SduI	GDGCHC	5 cut(s)	201, 360, 946, 1080, 2950
SfaNI	GCATC	7 cut(s)	807, 939, 1037, 1342, 2090, 2147, 2295
SfcI	CTRYAG	6 cut(s)	537, 799, 1546, 2346, 2442, 2653
Sfr274I	CTCGAG	1 cut(s)	2960
SinI	GGWCC	2 cut(s)	902, 1139
SlaI	CTCGAG	1 cut(s)	2960
SmaI	CCCGGG	1 cut(s)	1504
SmiMI	CAYNNNNRTG	1 cut(s)	2990
SmlI	CTYRAG	5 cut(s)	254, 1179, 2330, 2783, 2960
SmoI	CTYRAG	5 cut(s)	254, 1179, 2330, 2783, 2960
SpeI	ACTAGT	1 cut(s)	2930
SphI	GCATGC	1 cut(s)	2890
SseBI	AGGCCT	1 cut(s)	2481
SsiI	CCGC	7 cut(s)	652, 1413, 2575, 2596, 2707, 2794, 2836
SspI	AATATT	1 cut(s)	25
SspMI	CTAG	8 cut(s)	557, 659, 744, 1623, 1800, 2202, 2477, 2931
StuI	AGGCCT	1 cut(s)	2481
StyI	CCWWGG	3 cut(s)	766, 898, 2847
TaaI	ACNGT	6 cut(s)	203, 232, 935, 1300, 1708, 2278
TaiI	ACGT	5 cut(s)	270, 278, 943, 1440, 2521
TaqI	TCGA	6 cut(s)	464, 1733, 2262, 2808, 2853, 2961
TatI	WGTACW	2 cut(s)	2062, 2695
TauI	GCSGC	2 cut(s)	655, 2577
TscAI	CASTG	6 cut(s)	940, 1555, 1711, 1792, 2100, 2229
TseFI	GTSAC	3 cut(s)	112, 1510, 2095
TseI	GCWGC	9 cut(s)	327, 2030, 2147, 2250, 2345, 2360, 2369, 2372, 2534
Tsp45I	GTSAC	3 cut(s)	112, 1510, 2095
TspGWI	ACGGA	2 cut(s)	176, 1466
TspMI	CCCGGG	1 cut(s)	1502
TspRI	CASTG	6 cut(s)	940, 1555, 1711, 1792, 2100, 2229
Van91I	CCANNNNNTGG	1 cut(s)	1812
Vha464I	CTTAAG	2 cut(s)	254, 2330
VpaK11BI	GGWCC	2 cut(s)	902, 1139
VspI	ATTAAT	2 cut(s)	27, 989
XagI	CCTNNNNNAGG	1 cut(s)	1900
XapI	RAATTY	9 cut(s)	313, 698, 1001, 1048, 1316, 1332, 1562, 1668, 1990
XceI	RCATGY	2 cut(s)	2627, 2890
XhoI	CTCGAG	1 cut(s)	2960
XmaI	CCCGGG	1 cut(s)	1502
XmiI	GTMKAC	2 cut(s)	963, 1097
XmnI	GAANNNNTTC	1 cut(s)	1827
XspI	CTAG	8 cut(s)	557, 659, 744, 1623, 1800, 2202, 2477, 2931

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.