Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0010895

Physical Location & Seq

Genomic Coordinates Forward (+)

53337518 .. 53345628

Gene Structure 8111 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00371790.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2367 bp

ATGCAATCAGGCTCAGGATATAATATTGATGACCTCTTTCAAGAGGCTCAAAGCCGGTGGCTGAAGCCGGCTGAAGTGCTATTCATATTGCAGAATCATGAGAAGTATAAGGTCACCCCAGAGCCTCCTCAACAACCTGTTAGTGGGTCTTTGTTTCTTTTTAACAAAAGGATCCTTCGGTTTTTCCGTAGAGACGGGCACCGTTGGCGTAAAAAGAAGGATGGGAGAACTGTTGGTGAAGCACATGAACGGCTTAAGGTTTGTTACAGCAGCCTAATAGTTGTTGGAAACGTTGAGACATTGAATTGTTATTATGCGCATGGGGAGGACAATCCGAATTTTCAGAGGCGCAGCTATTGGATGTTGGATCCGGCATATGAGCACATTGTTCTTGTTCATTATAGGGAAATTAGCGAGGTGAAGCCCGGTACAGGATCGTTTATACAATCACCAGTTTCCTCTTCTTCCCTCAGCCAGAGTCCAATCTCGAATACTACACAACATCCAGGATCTGTCTCCATGATTAGTGAGTTGTATGAACCTTATATGAGTCCAGGTTCTGTAGAAGTTAGTTCGGATCTAGTCATCAAGAAAAATGGAAGAGAGAGCGTAGAGAACTTATATAGAACAGGGGAGTCAGATAGTTCATCTAAGGCTGATGTTAGTCAAGCTTTGCGGCGACTAGAGGAGCAGTTAAGTTTAAATGATGATAGCTTCAACGAATTTGTGGATGATAATCCAGATGGGTCAGATATCCCCGAATACCCTAGTGATCAGTTTACTGCCTTCCATGGACAAGAACATATTGTTCACGATCAGTTCTATAGTGGGCATTCTCTGATGCAAGGGAATGCAGACAATAGTTCAGATATCTTGGATTACCATAATGATATCGTCAATCAGGATCAGTTTACTCCCTTCCATGGACCAGAACACATTGTAAATGATCAGTTTTACAGTGGACGTGCTCAGATGCAAAGTAATGTAGACCTTAGTGGTAAACATCGTCAATTAATTGGTCATGAATTTCCAGATGGAAACAAAGAATCAGCATCTTGGAAGGAGGTTCTGAATTCATCTAAGACTTCATCAGTTGTGGAGCCCCAGGAGACAGGCTTGTATACATTGGACAGAAATGAAAAACTATCTTCATCATTGACTGGTCCAAATGGGGTGTTTGAATATCCTTCTTTGTCGCGTCCTCAAGAAGTTGACATTTTCAAGTCTCCATTTTCATCTGCAATAGAAACACATTCAGACTACTTTACATCATTTTTTGAGCAAGGACAAATGGGAAATCTTGAATCAGATATCAGTTTGACTGTTGCACAGACGCAAAAATTTACAATTCAGGAAATTTCTCCAGAATGGGGTGACGCCAACGAACCCACAAGGGTCATTGTTATTGGATCTTTTCTGTGCGATCCATCAGAATCCGCGTGGACTTGTATGTTTGGCAACGTTGAAGTTCCTGCTCAGATCATTCAGGAAGGCGTAATCCGTTGTGAAGCTCCCCCTCACCTTCCCGGGAAGGTGACATTCTGCATTACTTCAGGCAATCGGCAGTCCTGCAGTGAAGTTAGGGAATTTGAGTATCGCGTTAAGAGCAATAGATCTACTCCAAATAATTCACCTCCAAAAGAATCTAGTAGGAGTGCAGAAGAACTTTTATTACTTGTCAGATTCGCTCAAATTCTTTTGTCTGATTCATCGGTGCAGAAAAGCAACACTGTTGAGTCTGAGTTTGTGAGAAAATCGAAAGCTGACGATGATACTTGGGGTAGTATTATTGAGGCTCTCTTAGTAGGCAGTGGAAGTTCATCTAGTACCATATATTGGCTTCTGGAAGAGTTTCTAAAAGACAAGTTGGAGCAATGGCTTTCTTCCAGATCCCAGGGACTTGACCAGACAGATTGTTCCTTATCCAGGAAAGAGCAAGGCATGATACACATGGTTGCTGGGTTGGGCTTTGAGTGGGCAATTAACCCAATACTCAATCTTGGAGTCAATATAAATTTCCGGGATATAAACGGGTGGACTGCTCTACATTGGGCTGCGCGTTTTGGAAGGGAAAAGATGGTTGCTGTACTGGTTGCTTCTGGTGCATCAGCTGGAGCAGTGACTGACCCCAGTTCCCAAGATCCCATAGGCAAAACTCCGGCATCTATTGCAGCCATTCATGGGCATAAGGGACTTGCAGGTTATCTTTCAGAGGTGGCACTCACTAGCCATCTGTCATCCCTTACACTGGAAGAAAGTGAGATTTCCAGAGGTTGCGCTGAGATCGAAGCAGAAATAACAGTAAATAGCATCTCAAAGAGTAGCCTGGAGACTAATGGAGATCAGACCCCCTTAAGAACACCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000982 GO:0001077 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_2 Ank_4 CG-1 IQ TIG

Protein Analysis

788

Amino Acids

87.66

Weight (kDa)

5.03

Isoelectric Point (pI)

50.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CG-1	PF03859	15 - 136	1.1e-44	CG-1 domain
TIG	PF01833	449 - 532	1.1e-08	IPT/TIG domain
Ank_2	PF12796	650 - 737	8.3e-09	Ankyrin repeats (3 copies)
Ank	PF00023	677 - 707	1e-05	Ankyrin repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010895)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67310
fragaria_vesca	FvH4_4g23551 FvH4_4g23551
malus_domestica	MD13G1121200.v1.1 MD16G1121200.v1.1
prunus_persica	Prupe.1G224000_v2.0.a1 Prupe.1G224000_v2.0.a1 Prupe.1G224000_v2.0.a1
pyrus_communis	pycom13g10550 pycom16g10390
rosa_chinensis	RchiOBHm_Chr4g0429961
rosa_laevigata	RLG00000007017
rosa_multiflora	Rmu_ssc0000150.1_g000038
rosa_roxburghii	Rroxscaffold_5G00371790
rosa_rugosa	Rorug04G0239700
rosa_samantha	Rh4AG296100 Rh4BG302600 Rh4CG318100 Rh4DG299900
rosa_wichuraiana	Rw4G025650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	318
Acc36I	ACCTGC	1 cut(s)	2189
AccB1I	GGYRCC	1 cut(s)	198
AccB7I	CCANNNNNTGG	1 cut(s)	1836
AccI	GTMKAC	2 cut(s)	987, 1121
AccII	CGCG	4 cut(s)	1198, 1439, 1599, 2059
AciI	CCGC	2 cut(s)	676, 1437
AclI	AACGTT	2 cut(s)	291, 1461
AcsI	RAATTY	9 cut(s)	337, 722, 1025, 1072, 1340, 1356, 1586, 1692, 2014
AcuI	CTGAAG	3 cut(s)	83, 93, 1536
AcyI	GRCGYC	1 cut(s)	1377
AfaI	GTAC	3 cut(s)	430, 1828, 2088
AfiI	CCNNNNNNNGG	8 cut(s)	143, 431, 923, 1370, 1836, 1926, 2181, 2248
AflII	CTTAAG	2 cut(s)	254, 2353
AgsI	TTSAA	7 cut(s)	41, 304, 718, 1181, 1222, 1304, 1466
AjiI	CACGTC	1 cut(s)	965
AjnI	CCWGG	6 cut(s)	505, 553, 1104, 1893, 1925, 2325
AluBI	AGCT	6 cut(s)	354, 671, 714, 1511, 1763, 2111
AluI	AGCT	6 cut(s)	354, 671, 714, 1511, 1763, 2111
Alw21I	GWGCWC	2 cut(s)	384, 970
Alw26I	GTCTC	6 cut(s)	186, 290, 520, 1103, 1230, 2324
AlwNI	CAGNNNCTG	3 cut(s)	512, 560, 2123
Ama87I	CYCGRG	1 cut(s)	1526
ApeKI	GCWGC	4 cut(s)	270, 351, 2054, 2171
ApoI	RAATTY	9 cut(s)	337, 722, 1025, 1072, 1340, 1356, 1586, 1692, 2014
AseI	ATTAAT	1 cut(s)	1013
Asp700I	GAANNNNTTC	1 cut(s)	1851
AspLEI	GCGC	4 cut(s)	319, 351, 2059, 2279
AspS9I	GGNCC	2 cut(s)	926, 1163
AsuC2I	CCSGG	4 cut(s)	426, 1527, 1528, 2021
AsuHPI	GGTGA	8 cut(s)	106, 248, 430, 441, 1385, 1511, 1546, 1623
AvaI	CYCGRG	1 cut(s)	1526
AvaII	GGWCC	2 cut(s)	926, 1163
BaeGI	GKGCMC	1 cut(s)	201
BamHI	GGATCC	2 cut(s)	171, 367
BanI	GGYRCC	1 cut(s)	198
BanII	GRGCYC	1 cut(s)	1104
Bbv12I	GWGCWC	2 cut(s)	384, 970
BbvCI	CCTCAGC	1 cut(s)	470
BbvI	GCAGC	4 cut(s)	282, 363, 2041, 2183
BccI	CCATC	6 cut(s)	215, 737, 1028, 1435, 2071, 2238
BceAI	ACGGC	1 cut(s)	266
BciT130I	CCWGG	6 cut(s)	507, 555, 1106, 1895, 1927, 2327
BclI	TGATCA	2 cut(s)	772, 946
BcnI	CCSGG	4 cut(s)	426, 1527, 1528, 2021
BcoDI	GTCTC	6 cut(s)	186, 290, 520, 1103, 1230, 2324
BfaI	CTAG	6 cut(s)	581, 683, 768, 1647, 1824, 2226
BfmI	CTRYAG	3 cut(s)	561, 823, 1570
BfrI	CTTAAG	2 cut(s)	254, 2353
BfuAI	ACCTGC	1 cut(s)	2189
BglII	AGATCT	1 cut(s)	1613
BisI	GCNGC	5 cut(s)	271, 352, 677, 2055, 2172
BlsI	GCNGC	5 cut(s)	272, 353, 678, 2056, 2173
Bme18I	GGWCC	2 cut(s)	926, 1163
BmeT110I	CYCGRG	1 cut(s)	1526
BmgBI	CACGTC	1 cut(s)	965
BmgT120I	GGNCC	2 cut(s)	926, 1163
BmiI	GGNNCC	4 cut(s)	173, 200, 369, 1101
BmrI	ACTGGG	1 cut(s)	2124
BmsI	GCATC	6 cut(s)	831, 963, 1061, 2114, 2171, 2319
BmuI	ACTGGG	1 cut(s)	2124
BpmI	CTGGAG	3 cut(s)	1347, 2133, 2348
Bpu10I	CCTNAGC	2 cut(s)	13, 470
BpuEI	CTTGAG	1 cut(s)	1188
BpuMI	CCSGG	4 cut(s)	426, 1527, 1528, 2021
BsaBI	GATNNNNATC	1 cut(s)	735
BsaHI	GRCGYC	1 cut(s)	1377
BsaJI	CCNNGG	6 cut(s)	790, 922, 1104, 1526, 1893, 1894
Bsc4I	CCNNNNNNNGG	8 cut(s)	143, 431, 923, 1370, 1836, 1926, 2181, 2248
Bse118I	RCCGGY	2 cut(s)	54, 67
Bse1I	ACTGG	5 cut(s)	452, 1165, 2094, 2130, 2253
Bse3DI	GCAATG	1 cut(s)	1880
Bse8I	GATNNNNATC	1 cut(s)	735
BseBI	CCWGG	6 cut(s)	507, 555, 1106, 1895, 1927, 2327
BseDI	CCNNGG	6 cut(s)	790, 922, 1104, 1526, 1893, 1894
BseGI	GGATG	5 cut(s)	226, 366, 502, 736, 2237
BseJI	GATNNNNATC	1 cut(s)	735
BseLI	CCNNNNNNNGG	8 cut(s)	143, 431, 923, 1370, 1836, 1926, 2181, 2248
BseMI	GCAATG	1 cut(s)	1880
BseMII	CTCAG	6 cut(s)	27, 484, 983, 1490, 1731, 2271
BseNI	ACTGG	5 cut(s)	452, 1165, 2094, 2130, 2253
BseRI	GAGGAG	2 cut(s)	117, 701
BseSI	GKGCMC	1 cut(s)	201
BseXI	GCAGC	4 cut(s)	282, 363, 2041, 2183
BseYI	CCCAGC	1 cut(s)	1958
BsgI	GTGCAG	2 cut(s)	1677, 1736
Bsh1236I	CGCG	4 cut(s)	1198, 1439, 1599, 2059
BshNI	GGYRCC	1 cut(s)	198
BsiHKAI	GWGCWC	2 cut(s)	384, 970
BsiHKCI	CYCGRG	1 cut(s)	1526
BsiSI	CCGG	7 cut(s)	55, 68, 371, 426, 1527, 2020, 2159
BslFI	GGGAC	2 cut(s)	1911, 2205
BslI	CCNNNNNNNGG	8 cut(s)	143, 431, 923, 1370, 1836, 1926, 2181, 2248
BsmAI	GTCTC	6 cut(s)	186, 290, 520, 1103, 1230, 2324
BsmBI	CGTCTC	1 cut(s)	186
BsmFI	GGGAC	2 cut(s)	1911, 2205
BsmI	GAATGC	2 cut(s)	832, 856
BsoBI	CYCGRG	1 cut(s)	1526
Bsp1286I	GDGCHC	4 cut(s)	201, 384, 970, 1104
Bsp19I	CCATGG	2 cut(s)	790, 922
BspACI	CCGC	2 cut(s)	676, 1437
BspCNI	CTCAG	6 cut(s)	26, 483, 982, 1489, 1732, 2272
BspFNI	CGCG	4 cut(s)	1198, 1439, 1599, 2059
BspHI	TCATGA	2 cut(s)	97, 1021
BspLI	GGNNCC	4 cut(s)	173, 200, 369, 1101
BspMAI	CTGCAG	1 cut(s)	1574
BspMI	ACCTGC	1 cut(s)	2189
BspT107I	GGYRCC	1 cut(s)	198
BspTI	CTTAAG	2 cut(s)	254, 2353
BsrDI	GCAATG	1 cut(s)	1880
BsrFI	RCCGGY	2 cut(s)	54, 67
BsrI	ACTGG	5 cut(s)	452, 1165, 2094, 2130, 2253
BssAI	RCCGGY	2 cut(s)	54, 67
BssECI	CCNNGG	6 cut(s)	790, 922, 1104, 1526, 1893, 1894
BssNAI	GTATAC	1 cut(s)	1122
BssNI	GRCGYC	1 cut(s)	1377
BssT1I	CCWWGG	2 cut(s)	790, 922
Bst1107I	GTATAC	1 cut(s)	1122
Bst2UI	CCWGG	6 cut(s)	507, 555, 1106, 1895, 1927, 2327
Bst4CI	ACNGT	6 cut(s)	203, 232, 959, 1324, 1732, 2302
Bst6I	CTCTTC	3 cut(s)	466, 595, 1842
BstACI	GRCGYC	1 cut(s)	1377
BstAFI	CTTAAG	2 cut(s)	254, 2353
BstAPI	GCANNNNNTGC	1 cut(s)	2168
BstC8I	GCNNGC	1 cut(s)	69
BstDSI	CCRYGG	2 cut(s)	790, 922
BstEII	GGTNACC	1 cut(s)	112
BstENI	CCTNNNNNAGG	1 cut(s)	1924
BstF5I	GGATG	5 cut(s)	226, 366, 502, 736, 2237
BstFNI	CGCG	4 cut(s)	1198, 1439, 1599, 2059
BstHHI	GCGC	4 cut(s)	319, 351, 2059, 2279
BstMAI	GTCTC	6 cut(s)	186, 290, 520, 1103, 1230, 2324
BstMWI	GCNNNNNNNGC	4 cut(s)	205, 1605, 2102, 2168
BstNI	CCWGG	6 cut(s)	507, 555, 1106, 1895, 1927, 2327
BstPI	GGTNACC	1 cut(s)	112
BstSFI	CTRYAG	3 cut(s)	561, 823, 1570
BstSLI	GKGCMC	1 cut(s)	201
BstUI	CGCG	4 cut(s)	1198, 1439, 1599, 2059
BstV1I	GCAGC	4 cut(s)	282, 363, 2041, 2183
BstX2I	RGATCY	8 cut(s)	171, 367, 509, 577, 1409, 1613, 1889, 2140
BstYI	RGATCY	8 cut(s)	171, 367, 509, 577, 1409, 1613, 1889, 2140
BstZ17I	GTATAC	1 cut(s)	1122
BtgI	CCRYGG	2 cut(s)	790, 922
BtrI	CACGTC	1 cut(s)	965
BtsCI	GGATG	5 cut(s)	226, 366, 502, 736, 2237
BtsI	GCAGTG	3 cut(s)	1579, 1816, 2124
BtsIMutI	CAGTG	6 cut(s)	964, 1579, 1728, 1816, 2124, 2246
BveI	ACCTGC	1 cut(s)	2189
Cac8I	GCNNGC	1 cut(s)	69
CaiI	CAGNNNCTG	3 cut(s)	512, 560, 2123
CciI	TCATGA	2 cut(s)	97, 1021
CfoI	GCGC	4 cut(s)	319, 351, 2059, 2279
Cfr10I	RCCGGY	2 cut(s)	54, 67
Cfr13I	GGNCC	2 cut(s)	926, 1163
Cfr9I	CCCGGG	1 cut(s)	1526
CseI	GACGC	3 cut(s)	1187, 1342, 1385
Csp6I	GTAC	3 cut(s)	429, 1827, 2087
CspCI	CAANNNNNGTGG	2 cut(s)	38, 73
CviQI	GTAC	3 cut(s)	429, 1827, 2087
DraI	TTTAAA	1 cut(s)	702
Eam1104I	CTCTTC	3 cut(s)	466, 595, 1842
EarI	CTCTTC	3 cut(s)	466, 595, 1842
Eco130I	CCWWGG	2 cut(s)	790, 922
Eco24I	GRGCYC	1 cut(s)	1104
Eco32I	GATATC	4 cut(s)	754, 871, 892, 1312
Eco47I	GGWCC	2 cut(s)	926, 1163
Eco57I	CTGAAG	3 cut(s)	83, 93, 1536
Eco88I	CYCGRG	1 cut(s)	1526
Eco91I	GGTNACC	1 cut(s)	112
EcoNI	CCTNNNNNAGG	1 cut(s)	1924
EcoO65I	GGTNACC	1 cut(s)	112
EcoRI	GAATTC	1 cut(s)	1072
EcoRII	CCWGG	6 cut(s)	505, 553, 1104, 1893, 1925, 2325
EcoRV	GATATC	4 cut(s)	754, 871, 892, 1312
EcoT14I	CCWWGG	2 cut(s)	790, 922
EcoT38I	GRGCYC	1 cut(s)	1104
ErhI	CCWWGG	2 cut(s)	790, 922
Esp3I	CGTCTC	1 cut(s)	186
FalI	AAGNNNNNCTT	1 cut(s)	2347
FaqI	GGGAC	2 cut(s)	1911, 2205
FauNDI	CATATG	1 cut(s)	376
FbaI	TGATCA	2 cut(s)	772, 946
FblI	GTMKAC	2 cut(s)	987, 1121
Fnu4HI	GCNGC	5 cut(s)	271, 352, 677, 2055, 2172
FokI	GGATG	5 cut(s)	233, 373, 489, 743, 2224
FriOI	GRGCYC	1 cut(s)	1104
Fsp4HI	GCNGC	5 cut(s)	271, 352, 677, 2055, 2172
FspAI	RTGCGCAY	1 cut(s)	318
FspBI	CTAG	6 cut(s)	581, 683, 768, 1647, 1824, 2226
FspI	TGCGCA	1 cut(s)	318
GlaI	GCGC	4 cut(s)	318, 350, 2058, 2278
GluI	GCNGC	5 cut(s)	271, 352, 677, 2055, 2172
GsaI	CCCAGC	1 cut(s)	1962
GsuI	CTGGAG	3 cut(s)	1347, 2133, 2348
HapII	CCGG	7 cut(s)	55, 68, 371, 426, 1527, 2020, 2159
HgaI	GACGC	3 cut(s)	1187, 1342, 1385
HhaI	GCGC	4 cut(s)	319, 351, 2059, 2279
Hin1I	GRCGYC	1 cut(s)	1377
Hin6I	GCGC	4 cut(s)	317, 349, 2057, 2277
HinP1I	GCGC	4 cut(s)	317, 349, 2057, 2277
HincII	GTYRAC	1 cut(s)	1213
HindII	GTYRAC	1 cut(s)	1213
HindIII	AAGCTT	1 cut(s)	669
HpaII	CCGG	7 cut(s)	55, 68, 371, 426, 1527, 2020, 2159
HphI	GGTGA	8 cut(s)	106, 248, 430, 441, 1385, 1511, 1546, 1623
HpyCH4III	ACNGT	6 cut(s)	203, 232, 959, 1324, 1732, 2302
HpyCH4IV	ACGT	3 cut(s)	291, 964, 1461
HpyF10VI	GCNNNNNNNGC	4 cut(s)	205, 1605, 2102, 2168
HpySE526I	ACGT	3 cut(s)	291, 964, 1461
Hsp92I	GRCGYC	1 cut(s)	1377
HspAI	GCGC	4 cut(s)	317, 349, 2057, 2277
KroI	GCCGGC	1 cut(s)	67
KroNI	GCCGGC	1 cut(s)	69
Ksp22I	TGATCA	2 cut(s)	772, 946
LmnI	GCTCC	5 cut(s)	688, 1099, 1516, 1870, 2114
Lsp1109I	GCAGC	4 cut(s)	282, 363, 2041, 2183
LweI	GCATC	6 cut(s)	831, 963, 1061, 2114, 2171, 2319
MaeI	CTAG	6 cut(s)	581, 683, 768, 1647, 1824, 2226
MaeII	ACGT	3 cut(s)	291, 964, 1461
MaeIII	GTNAC	5 cut(s)	112, 263, 1373, 1534, 2119
MboII	GAAGA	8 cut(s)	453, 456, 612, 1140, 1673, 1859, 1875, 2264
MflI	RGATCY	8 cut(s)	171, 367, 509, 577, 1409, 1613, 1889, 2140
MhlI	GDGCHC	4 cut(s)	201, 384, 970, 1104
MlyI	GAGTC	5 cut(s)	487, 559, 644, 1745, 2013
MmeI	TCCRAC	3 cut(s)	265, 345, 1848
MroNI	GCCGGC	1 cut(s)	67
MroXI	GAANNNNTTC	1 cut(s)	1851
MseI	TTAA	8 cut(s)	162, 255, 695, 701, 1013, 1602, 1983, 2354
MspA1I	CMGCKG	1 cut(s)	2111
MspCI	CTTAAG	2 cut(s)	254, 2353
MspI	CCGG	7 cut(s)	55, 68, 371, 426, 1527, 2020, 2159
Mva1269I	GAATGC	2 cut(s)	832, 856
MvaI	CCWGG	6 cut(s)	507, 555, 1106, 1895, 1927, 2327
MvnI	CGCG	4 cut(s)	1198, 1439, 1599, 2059
MwoI	GCNNNNNNNGC	4 cut(s)	205, 1605, 2102, 2168
NaeI	GCCGGC	1 cut(s)	69
NciI	CCSGG	4 cut(s)	426, 1527, 1528, 2021
NcoI	CCATGG	2 cut(s)	790, 922
NdeI	CATATG	1 cut(s)	376
NgoMIV	GCCGGC	1 cut(s)	67
NlaIV	GGNNCC	4 cut(s)	173, 200, 369, 1101
NmuCI	GTSAC	4 cut(s)	112, 1373, 1534, 2119
NsbI	TGCGCA	1 cut(s)	318
PagI	TCATGA	2 cut(s)	97, 1021
PasI	CCCWGGG	1 cut(s)	1894
PcsI	WCGNNNNNNNCGW	1 cut(s)	184
PctI	GAATGC	2 cut(s)	832, 856
PdiI	GCCGGC	1 cut(s)	69
PdmI	GAANNNNTTC	1 cut(s)	1851
PfeI	GAWTC	7 cut(s)	94, 1046, 1304, 1433, 1643, 1683, 1706
PflMI	CCANNNNNTGG	1 cut(s)	1836
PfoI	TCCNGGA	3 cut(s)	505, 1925, 2019
PkrI	GCNGC	5 cut(s)	272, 353, 678, 2056, 2173
PleI	GAGTC	5 cut(s)	486, 558, 643, 1744, 2012
PpsI	GAGTC	5 cut(s)	486, 558, 643, 1744, 2012
PshBI	ATTAAT	1 cut(s)	1013
Psp1406I	AACGTT	2 cut(s)	291, 1461
Psp6I	CCWGG	6 cut(s)	505, 553, 1104, 1893, 1925, 2325
PspEI	GGTNACC	1 cut(s)	112
PspFI	CCCAGC	1 cut(s)	1958
PspGI	CCWGG	6 cut(s)	505, 553, 1104, 1893, 1925, 2325
PspN4I	GGNNCC	4 cut(s)	173, 200, 369, 1101
PspPI	GGNCC	2 cut(s)	926, 1163
PsrI	GAACNNNNNNTAC	2 cut(s)	1656, 1688
PstI	CTGCAG	1 cut(s)	1574
PstNI	CAGNNNCTG	3 cut(s)	512, 560, 2123
PsuI	RGATCY	8 cut(s)	171, 367, 509, 577, 1409, 1613, 1889, 2140
PvuII	CAGCTG	1 cut(s)	2111
RsaI	GTAC	3 cut(s)	430, 1828, 2088
RsaNI	GTAC	3 cut(s)	429, 1827, 2087
SaqAI	TTAA	8 cut(s)	162, 255, 695, 701, 1013, 1602, 1983, 2354
SatI	GCNGC	5 cut(s)	271, 352, 677, 2055, 2172
Sau96I	GGNCC	2 cut(s)	926, 1163
SchI	GAGTC	5 cut(s)	487, 559, 644, 1745, 2013
SduI	GDGCHC	4 cut(s)	201, 384, 970, 1104
SfaNI	GCATC	6 cut(s)	831, 963, 1061, 2114, 2171, 2319
SfcI	CTRYAG	3 cut(s)	561, 823, 1570
SinI	GGWCC	2 cut(s)	926, 1163
SmaI	CCCGGG	1 cut(s)	1528
SmlI	CTYRAG	3 cut(s)	254, 1203, 2353
SmoI	CTYRAG	3 cut(s)	254, 1203, 2353
SsiI	CCGC	2 cut(s)	676, 1437
SspI	AATATT	1 cut(s)	25
SspMI	CTAG	6 cut(s)	581, 683, 768, 1647, 1824, 2226
StyI	CCWWGG	2 cut(s)	790, 922
TaaI	ACNGT	6 cut(s)	203, 232, 959, 1324, 1732, 2302
TaiI	ACGT	3 cut(s)	294, 967, 1464
TaqI	TCGA	3 cut(s)	488, 1757, 2286
TatI	WGTACW	1 cut(s)	2086
TauI	GCSGC	1 cut(s)	679
TfiI	GAWTC	7 cut(s)	94, 1046, 1304, 1433, 1643, 1683, 1706
Tru1I	TTAA	8 cut(s)	162, 255, 695, 701, 1013, 1602, 1983, 2354
Tru9I	TTAA	8 cut(s)	162, 255, 695, 701, 1013, 1602, 1983, 2354
TscAI	CASTG	6 cut(s)	964, 1579, 1735, 1816, 2124, 2253
TseFI	GTSAC	4 cut(s)	112, 1373, 1534, 2119
TseI	GCWGC	4 cut(s)	270, 351, 2054, 2171
Tsp45I	GTSAC	4 cut(s)	112, 1373, 1534, 2119
TspGWI	ACGGA	2 cut(s)	176, 1490
TspMI	CCCGGG	1 cut(s)	1526
TspRI	CASTG	6 cut(s)	964, 1579, 1735, 1816, 2124, 2253
Van91I	CCANNNNNTGG	1 cut(s)	1836
Vha464I	CTTAAG	2 cut(s)	254, 2353
VpaK11BI	GGWCC	2 cut(s)	926, 1163
VspI	ATTAAT	1 cut(s)	1013
XagI	CCTNNNNNAGG	1 cut(s)	1924
XapI	RAATTY	9 cut(s)	337, 722, 1025, 1072, 1340, 1356, 1586, 1692, 2014
XmaI	CCCGGG	1 cut(s)	1526
XmiI	GTMKAC	2 cut(s)	987, 1121
XmnI	GAANNNNTTC	1 cut(s)	1851
XspI	CTAG	6 cut(s)	581, 683, 768, 1647, 1824, 2226

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.