Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0010895

Physical Location & Seq

Genomic Coordinates Forward (+)

51803571 .. 51809748

Gene Structure 6178 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G025650.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3072 bp

ATGTCAAAAATACCCTTTTGGATATTTTACCGACGTTTTCGCCGTATTGATTACACTGACCAGGCTGCTGCACATCGCCTTCCTCCGGCCAATTGTGTTGTGCCACGATATAATATTAATGACCTCTTTCAAGAGGCTCAAGGCCGGTGGCTGAAGCCGGCCGAAGTGCTATTCATATTGCAGAATCATGAGAAGTATAAGGTCACCCCAGAGCCTCCTCAACAACCTGTTAGTGGGTCTTTGTTTCTTTTTAACAAAAGGATCCTTCGGTTTTTCCGTAGAGACGGGCACCGTTGGCGTAAAAAGAAGGATGGGAGAACTGTTGGTGAAGCACATGAACGGCTTAAGGTTGGAAACGTTGAGACGTTGAATTGTTATTATGCGCATGGGGAGGACAATCCGAATTTTCAGAGGCGCAGCTATTGGATGTTGGATCCGGCATATGAGCACATTGTTCTTGTTCATTATAGGGAAATTAGTGAGGTGAAGCCCGGTACAGGATCAAACATACAATCACCAGTTTCCTCTTCTACCCTCAGCCAGAGTCCAATCTCGAATACTACACAACATCCAGGATCTGTCTCCATGATTAGTGAGTTGTATGAACCTTATACGAGTCCAGGTTCTGTAGAAGTTAGTTCAGATCTAAGAACTTTTAGAACAGGGGAGTCAGATAGTTCATCTAAGGCTGATGTTAGTCAAGCTTTGCGGCGACTAGAGGAGCAGTTAAGTTTAAATGATGATAGCTTCAACGAATTTGTGGATGATAATCCAGATGGTTCAGATATCCCTGAATACCCTAGTGATCAGTTTACTGCCTTCCATGGACAAGAACATATTGTTCACGATCAGTTCTATAGTGGGCTTTCTCTGATGCAAGGGAATGCAGACAATAGTTCAGATATCTTGGATTACCATAATGATATCGTCAATCAGGATCAGTTTTCTCCCTTCCATGGACCAGAACACATTGTAAATGATCAGTTTTACAGTGGACGTGCTCAGATGCAAAGTGATGTAGACCTTAGTGGTAAACATCATCAATTAATTGGTCATGAATTTGCAGATGGAAACAAAGAATCAGCATCTTGGAAGGAGGTTCTGAATTCATCTAAGACTTCATCAGTTGTGGAGCCCCAGGAGACAGGCTTGTATACATTGGACAGAAGTGAAAAACTATCTTCATCATTGACTGGTCCAAATGGGGTGTTTGAATATCGTGAGTGCCTAAACTCCGTTAGGAATAATGTGAAACACTCTTCTCTGTCACGTCCTCAAGAAGTTGACATTTTCAAGTCTCCATTTTCATCTGCAATAGAAACACATTCGGACTACTTTACATCATTTTTTGAGCAAGGACAAATGGGAAATCTTGAATCAGATATCAGTTTGACTGTTGCACAGACGCAAAAATTTACAATTCGGGAAATTTCTCCAGAATGGGGTGATGCCAACGAACCCACAAAGGTCATTGTTATTGGATCTTTTCTGTGCGATCCATCAGAATCCGCATGGACTTGTATGTTTGGCAACGTTGAAGTTCCTGCTCAGATCATTCAGGAAGGAGTAATCCGTTGTGAAGCTCCCCCTCACCTTCCCGGGAAGGTGACACTCTGCATTACTTCAGGCAATCGGGAGTCCTGCAGTGAAGTTAGGGAATTTGAGTATCGCGTTAAGAGCAGTAGATCTACTCCAAATAATTCACCTCCAAAAGAATCTAGTAGGAGTGCAGAAGAACTTTTATTACTTGTCAGATTCGCTCAAATTCTTTTGTCTGATTCATCGGTGCAGAAAAGACACTCTGACGATGATGCTTGGGGTAGTATTATTGAGGCTCTCTTAGTAGGCAGTGGAAGTTCATCTAGTACCATATATTGGCTTCTGGAAGAGTTTCTAAAAGACAAGTTGGAGCAATGGCTTTCTTCCAGATCCCAGGGACTTGACCAGACAGATTGTTCCTTATCCAGGAAAGAGCAAGGCATGATACACATGGTTGCTGGGTTGGGCTTTGAGTGGGCAATTAACCCAATACTCAATCTTGGAGTCAATATAAATTTCCGGGATATAAACGGGTGGACTGCTCTACATTGGGCTGCGCGTTTTGGAAGGGAAAAGATGGTTGCTGTACTGGTTGCTTCTGGTGCATCAGCTGGAGCAGTGACAGACCCCAGTTCCCAAGATCCCATAGGCAAAACTCCGGCATCTATTGCAGCCATTCATGGGCATAAGGGACTTGCAGGTTATCTTTCAGAGGTGGCACTCACTAGCCATCTGTCATCCCTTACACTGGAAGAAAGTGAGATTTCCAGAAGCTGCGCTGAGATTGAAGCAGAAATAACAGTAAATAGCATCTCAAAGAGTAGCCTGGAGACTTATGAAGATCAGGCCCCCCTTAAGAACACCTTAGCTGCAGTCCGAAATGCAGCACAGGCTGCTGCACGCATACAATCTGCTTTTCGGGCGCATTCTTTCAGAAGACGACAACAGAAAGAAGGTGGTGTTACATTAGATGATTATGGTATCAGTTCAGATGACATACTAGGCCTTTCAGCTATGTCAAAGCTAAACTTTCGTAATCCACGTGATTACAATTCAGCTGCATTATCTATCCAGAAGAAATACCGAGGCTGGAAAGGCCGCAAGGATTTCCTGGCGCTCCGCAAGAAAGTTGTCAAGATACAGGCACATGTGAGAGGTTATCAAGTTAGGAAGCACTACAGGGTAATCTGTTGGGCCGTTGGGATTCTGGACAAAGTTGTACTAAGGTGGCGGAGAAAAGGAGTTGGTCTGCGTGGTTTTCGGAATGAGGCAGAATCCACAGAATCAAGTGAAGACGAAGATATCCTCAAGGTTTTCCGCAAACAGAAAGTCGATGGAGCCATTGACGAGGCTGTCTCGCGGGTGTTGTCCATGGTCGAGTCCCCAGAGGCCCGTGAGCAATATCAGCGCATGCTGGAGAGGTACCATCAAGCTAAGGCTGAATTGGGTAGCACTAGTGGTGAAGCAGGAGCACCAATTTCCCTCGAGGATTTCGTTAAGATGGAAGACATTGATATGTATCAGTTTCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000982 GO:0001077 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_2 Ank_4 CG-1 IQ TIG

Protein Analysis

1023

Amino Acids

114.96

Weight (kDa)

5.85

Isoelectric Point (pI)

51.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CG-1	PF03859	45 - 158	2.7e-48	CG-1 domain
TIG	PF01833	473 - 549	4.2e-08	IPT/TIG domain
Ank_2	PF12796	663 - 750	1.2e-08	Ankyrin repeats (3 copies)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010895)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67310
fragaria_vesca	FvH4_4g23551 FvH4_4g23551
malus_domestica	MD13G1121200.v1.1 MD16G1121200.v1.1
prunus_persica	Prupe.1G224000_v2.0.a1 Prupe.1G224000_v2.0.a1 Prupe.1G224000_v2.0.a1
pyrus_communis	pycom13g10550 pycom16g10390
rosa_chinensis	RchiOBHm_Chr4g0429961
rosa_laevigata	RLG00000007017
rosa_multiflora	Rmu_ssc0000150.1_g000038
rosa_roxburghii	Rroxscaffold_5G00371790
rosa_rugosa	Rorug04G0239700
rosa_samantha	Rh4AG296100 Rh4BG302600 Rh4CG318100 Rh4DG299900
rosa_wichuraiana	Rw4G025650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2891
AbsI	CCTCGAGG	1 cut(s)	3023
Acc16I	TGCGCA	1 cut(s)	384
Acc36I	ACCTGC	1 cut(s)	2228
Acc65I	GGTACC	1 cut(s)	2961
AccB1I	GGYRCC	2 cut(s)	288, 2961
AccB7I	CCANNNNNTGG	1 cut(s)	1875
AccI	GTMKAC	2 cut(s)	1020, 1154
AccII	CGCG	3 cut(s)	1671, 2098, 2899
AciI	CCGC	7 cut(s)	709, 1509, 2638, 2659, 2770, 2857, 2899
AclI	AACGTT	2 cut(s)	357, 1533
AcoI	YGGCCR	2 cut(s)	87, 159
AcsI	RAATTY	9 cut(s)	403, 755, 1058, 1105, 1412, 1428, 1658, 1764, 2053
AcuI	CTGAAG	2 cut(s)	173, 1608
AcvI	CACGTG	1 cut(s)	2582
AfaI	GTAC	5 cut(s)	496, 1867, 2127, 2760, 2963
AfiI	CCNNNNNNNGG	9 cut(s)	85, 233, 497, 956, 1442, 1875, 1965, 2220, 2287
AflII	CTTAAG	2 cut(s)	344, 2393
AflIII	ACRYGT	1 cut(s)	2686
AgsI	TTSAA	9 cut(s)	131, 370, 751, 1214, 1294, 1376, 1538, 2327, 3068
AhlI	ACTAGT	1 cut(s)	2993
AjiI	CACGTC	2 cut(s)	998, 1271
AjnI	CCWGG	8 cut(s)	60, 571, 619, 1137, 1932, 1964, 2364, 2649
Alw21I	GWGCWC	3 cut(s)	450, 1003, 3013
Alw26I	GTCTC	7 cut(s)	276, 356, 586, 1136, 1302, 2363, 2899
AlwNI	CAGNNNCTG	3 cut(s)	578, 626, 2313
Ama87I	CYCGRG	2 cut(s)	1598, 3023
AoxI	GGCC	8 cut(s)	87, 142, 159, 2385, 2542, 2635, 2733, 2928
ApoI	RAATTY	9 cut(s)	403, 755, 1058, 1105, 1412, 1428, 1658, 1764, 2053
ArsI	GACNNNNNNTTYG	2 cut(s)	2853, 2885
AseI	ATTAAT	2 cut(s)	117, 1046
Asp700I	GAANNNNTTC	1 cut(s)	1890
Asp718I	GGTACC	1 cut(s)	2961
AspLEI	GCGC	7 cut(s)	385, 417, 2098, 2318, 2464, 2656, 2949
AspS9I	GGNCC	5 cut(s)	959, 1196, 2386, 2733, 2929
AsuC2I	CCSGG	4 cut(s)	492, 1599, 1600, 2060
AsuHPI	GGTGA	9 cut(s)	196, 338, 496, 507, 1457, 1583, 1618, 1695, 3011
AvaI	CYCGRG	2 cut(s)	1598, 3023
AvaII	GGWCC	2 cut(s)	959, 1196
BaeGI	GKGCMC	1 cut(s)	291
BamHI	GGATCC	2 cut(s)	261, 433
BanI	GGYRCC	2 cut(s)	288, 2961
BanII	GRGCYC	1 cut(s)	1137
BbrPI	CACGTG	1 cut(s)	2582
BbsI	GAAGAC	3 cut(s)	2482, 2838, 3051
Bbv12I	GWGCWC	3 cut(s)	450, 1003, 3013
BbvCI	CCTCAGC	1 cut(s)	536
BccI	CCATC	9 cut(s)	305, 770, 1061, 1507, 2110, 2277, 2867, 2973, 3034
BceAI	ACGGC	3 cut(s)	27, 356, 2720
BciT130I	CCWGG	8 cut(s)	62, 573, 621, 1139, 1934, 1966, 2366, 2651
BclI	TGATCA	2 cut(s)	805, 979
BcnI	CCSGG	4 cut(s)	492, 1599, 1600, 2060
BcoDI	GTCTC	7 cut(s)	276, 356, 586, 1136, 1302, 2363, 2899
BcuI	ACTAGT	1 cut(s)	2993
BfaI	CTAG	7 cut(s)	716, 801, 1719, 1863, 2265, 2540, 2994
BfmI	CTRYAG	5 cut(s)	627, 856, 1642, 2409, 2716
BfoI	RGCGCY	1 cut(s)	2657
BfrI	CTTAAG	2 cut(s)	344, 2393
BfuAI	ACCTGC	1 cut(s)	2228
BglII	AGATCT	2 cut(s)	643, 1685
Bme18I	GGWCC	2 cut(s)	959, 1196
BmeT110I	CYCGRG	2 cut(s)	1598, 3023
BmgBI	CACGTC	2 cut(s)	998, 1271
BmgT120I	GGNCC	5 cut(s)	959, 1196, 2386, 2733, 2929
BmiI	GGNNCC	7 cut(s)	263, 290, 435, 1134, 2388, 2878, 2963
BmrI	ACTGGG	1 cut(s)	2163
BmsI	GCATC	8 cut(s)	864, 996, 1094, 1438, 1801, 2153, 2210, 2358
BmuI	ACTGGG	1 cut(s)	2163
BpiI	GAAGAC	3 cut(s)	2482, 2838, 3051
BplI	GAGNNNNNCTC	2 cut(s)	2879, 2911
BpmI	CTGGAG	4 cut(s)	1419, 2172, 2387, 2975
Bpu10I	CCTNAGC	3 cut(s)	536, 2404, 2973
BpuEI	CTTGAG	3 cut(s)	123, 1260, 2831
BpuMI	CCSGG	4 cut(s)	492, 1599, 1600, 2060
BsaAI	YACGTR	1 cut(s)	2582
BsaBI	GATNNNNATC	2 cut(s)	768, 3057
BsaJI	CCNNGG	8 cut(s)	823, 955, 1137, 1598, 1932, 1933, 2623, 2910
Bsc4I	CCNNNNNNNGG	9 cut(s)	85, 233, 497, 956, 1442, 1875, 1965, 2220, 2287
Bse118I	RCCGGY	2 cut(s)	144, 157
Bse1I	ACTGG	5 cut(s)	518, 1198, 2133, 2169, 2292
Bse3DI	GCAATG	1 cut(s)	1919
Bse8I	GATNNNNATC	2 cut(s)	768, 3057
BseBI	CCWGG	8 cut(s)	62, 573, 621, 1139, 1934, 1966, 2366, 2651
BseDI	CCNNGG	8 cut(s)	823, 955, 1137, 1598, 1932, 1933, 2623, 2910
BseGI	GGATG	5 cut(s)	316, 432, 568, 769, 2276
BseJI	GATNNNNATC	2 cut(s)	768, 3057
BseLI	CCNNNNNNNGG	9 cut(s)	85, 233, 497, 956, 1442, 1875, 1965, 2220, 2287
BseMI	GCAATG	1 cut(s)	1919
BseMII	CTCAG	4 cut(s)	550, 1016, 1562, 2310
BseNI	ACTGG	5 cut(s)	518, 1198, 2133, 2169, 2292
BseRI	GAGGAG	2 cut(s)	207, 734
BseSI	GKGCMC	1 cut(s)	291
BseX3I	CGGCCG	1 cut(s)	159
BseYI	CCCAGC	1 cut(s)	1997
BsgI	GTGCAG	4 cut(s)	54, 1749, 1808, 2421
Bsh1236I	CGCG	3 cut(s)	1671, 2098, 2899
Bsh1285I	CGRYCG	1 cut(s)	162
BshFI	GGCC	8 cut(s)	89, 144, 161, 2387, 2544, 2637, 2735, 2930
BshNI	GGYRCC	2 cut(s)	288, 2961
BsiEI	CGRYCG	1 cut(s)	162
BsiHKAI	GWGCWC	3 cut(s)	450, 1003, 3013
BsiHKCI	CYCGRG	2 cut(s)	1598, 3023
BsiSI	CCGG	8 cut(s)	86, 145, 158, 437, 492, 1599, 2059, 2198
BslFI	GGGAC	3 cut(s)	1950, 2244, 2905
BslI	CCNNNNNNNGG	9 cut(s)	85, 233, 497, 956, 1442, 1875, 1965, 2220, 2287
BsmAI	GTCTC	7 cut(s)	276, 356, 586, 1136, 1302, 2363, 2899
BsmBI	CGTCTC	2 cut(s)	276, 356
BsmFI	GGGAC	3 cut(s)	1950, 2244, 2905
BsmI	GAATGC	2 cut(s)	889, 2464
BsnI	GGCC	8 cut(s)	89, 144, 161, 2387, 2544, 2637, 2735, 2930
BsoBI	CYCGRG	2 cut(s)	1598, 3023
Bsp1286I	GDGCHC	5 cut(s)	291, 450, 1003, 1137, 3013
Bsp19I	CCATGG	3 cut(s)	823, 955, 2910
BspACI	CCGC	7 cut(s)	709, 1509, 2638, 2659, 2770, 2857, 2899
BspANI	GGCC	8 cut(s)	89, 144, 161, 2387, 2544, 2637, 2735, 2930
BspCNI	CTCAG	4 cut(s)	549, 1015, 1561, 2311
BspFNI	CGCG	3 cut(s)	1671, 2098, 2899
BspHI	TCATGA	2 cut(s)	187, 1054
BspLI	GGNNCC	7 cut(s)	263, 290, 435, 1134, 2388, 2878, 2963
BspMAI	CTGCAG	2 cut(s)	1646, 2413
BspMI	ACCTGC	1 cut(s)	2228
BspT107I	GGYRCC	2 cut(s)	288, 2961
BspTI	CTTAAG	2 cut(s)	344, 2393
BsrDI	GCAATG	1 cut(s)	1919
BsrFI	RCCGGY	2 cut(s)	144, 157
BsrI	ACTGG	5 cut(s)	518, 1198, 2133, 2169, 2292
BssAI	RCCGGY	2 cut(s)	144, 157
BssECI	CCNNGG	8 cut(s)	823, 955, 1137, 1598, 1932, 1933, 2623, 2910
BssNAI	GTATAC	1 cut(s)	1155
BssT1I	CCWWGG	3 cut(s)	823, 955, 2910
Bst1107I	GTATAC	1 cut(s)	1155
Bst2UI	CCWGG	8 cut(s)	62, 573, 621, 1139, 1934, 1966, 2366, 2651
Bst4CI	ACNGT	5 cut(s)	293, 322, 992, 1396, 2341
Bst6I	CTCTTC	3 cut(s)	532, 1264, 1881
BstAFI	CTTAAG	2 cut(s)	344, 2393
BstAPI	GCANNNNNTGC	2 cut(s)	2207, 2432
BstBAI	YACGTR	1 cut(s)	2582
BstC8I	GCNNGC	3 cut(s)	159, 2440, 2951
BstDSI	CCRYGG	3 cut(s)	823, 955, 2910
BstEII	GGTNACC	1 cut(s)	202
BstENI	CCTNNNNNAGG	1 cut(s)	1963
BstF5I	GGATG	5 cut(s)	316, 432, 568, 769, 2276
BstFNI	CGCG	3 cut(s)	1671, 2098, 2899
BstH2I	RGCGCY	1 cut(s)	2657
BstHHI	GCGC	7 cut(s)	385, 417, 2098, 2318, 2464, 2656, 2949
BstMAI	GTCTC	7 cut(s)	276, 356, 586, 1136, 1302, 2363, 2899
BstMCI	CGRYCG	1 cut(s)	162
BstMWI	GCNNNNNNNGC	9 cut(s)	295, 1677, 2141, 2207, 2429, 2432, 2459, 2634, 2944
BstNI	CCWGG	8 cut(s)	62, 573, 621, 1139, 1934, 1966, 2366, 2651
BstNSI	RCATGY	2 cut(s)	2690, 2953
BstPI	GGTNACC	1 cut(s)	202
BstSFI	CTRYAG	5 cut(s)	627, 856, 1642, 2409, 2716
BstSLI	GKGCMC	1 cut(s)	291
BstUI	CGCG	3 cut(s)	1671, 2098, 2899
BstV2I	GAAGAC	3 cut(s)	2482, 2838, 3051
BstX2I	RGATCY	8 cut(s)	261, 433, 575, 643, 1481, 1685, 1928, 2179
BstYI	RGATCY	8 cut(s)	261, 433, 575, 643, 1481, 1685, 1928, 2179
BstZ17I	GTATAC	1 cut(s)	1155
BstZI	CGGCCG	1 cut(s)	159
BsuRI	GGCC	8 cut(s)	89, 144, 161, 2387, 2544, 2637, 2735, 2930
BtgI	CCRYGG	3 cut(s)	823, 955, 2910
BtgZI	GCGATG	1 cut(s)	59
BtrI	CACGTC	2 cut(s)	998, 1271
BtsCI	GGATG	5 cut(s)	316, 432, 568, 769, 2276
BtsI	GCAGTG	3 cut(s)	1651, 1855, 2163
BtsIMutI	CAGTG	6 cut(s)	54, 997, 1651, 1855, 2163, 2285
BveI	ACCTGC	1 cut(s)	2228
Cac8I	GCNNGC	3 cut(s)	159, 2440, 2951
CaiI	CAGNNNCTG	3 cut(s)	578, 626, 2313
CciI	TCATGA	2 cut(s)	187, 1054
CfoI	GCGC	7 cut(s)	385, 417, 2098, 2318, 2464, 2656, 2949
Cfr10I	RCCGGY	2 cut(s)	144, 157
Cfr13I	GGNCC	5 cut(s)	959, 1196, 2386, 2733, 2929
Cfr9I	CCCGGG	1 cut(s)	1598
CseI	GACGC	1 cut(s)	1414
Csp6I	GTAC	5 cut(s)	495, 1866, 2126, 2759, 2962
CspCI	CAANNNNNGTGG	2 cut(s)	128, 163
CviQI	GTAC	5 cut(s)	495, 1866, 2126, 2759, 2962
DraI	TTTAAA	1 cut(s)	735
DrdI	GACNNNNNNGTC	1 cut(s)	2891
DseDI	GACNNNNNNGTC	1 cut(s)	2891
EaeI	YGGCCR	2 cut(s)	87, 159
EagI	CGGCCG	1 cut(s)	159
Eam1104I	CTCTTC	3 cut(s)	532, 1264, 1881
EarI	CTCTTC	3 cut(s)	532, 1264, 1881
EciI	GGCGGA	1 cut(s)	2785
EclXI	CGGCCG	1 cut(s)	159
Eco130I	CCWWGG	3 cut(s)	823, 955, 2910
Eco147I	AGGCCT	1 cut(s)	2544
Eco24I	GRGCYC	1 cut(s)	1137
Eco32I	GATATC	5 cut(s)	787, 904, 925, 1384, 2842
Eco47I	GGWCC	2 cut(s)	959, 1196
Eco52I	CGGCCG	1 cut(s)	159
Eco57I	CTGAAG	2 cut(s)	173, 1608
Eco72I	CACGTG	1 cut(s)	2582
Eco88I	CYCGRG	2 cut(s)	1598, 3023
Eco91I	GGTNACC	1 cut(s)	202
EcoNI	CCTNNNNNAGG	1 cut(s)	1963
EcoO109I	RGGNCCY	1 cut(s)	2386
EcoO65I	GGTNACC	1 cut(s)	202
EcoRI	GAATTC	1 cut(s)	1105
EcoRII	CCWGG	8 cut(s)	60, 571, 619, 1137, 1932, 1964, 2364, 2649
EcoRV	GATATC	5 cut(s)	787, 904, 925, 1384, 2842
EcoT14I	CCWWGG	3 cut(s)	823, 955, 2910
EcoT38I	GRGCYC	1 cut(s)	1137
ErhI	CCWWGG	3 cut(s)	823, 955, 2910
Esp3I	CGTCTC	2 cut(s)	276, 356
FalI	AAGNNNNNCTT	4 cut(s)	2387, 2419, 2552, 2584
FaqI	GGGAC	3 cut(s)	1950, 2244, 2905
FauI	CCCGC	1 cut(s)	2892
FauNDI	CATATG	1 cut(s)	442
FbaI	TGATCA	2 cut(s)	805, 979
FblI	GTMKAC	2 cut(s)	1020, 1154
FokI	GGATG	5 cut(s)	323, 439, 555, 776, 2263
FriOI	GRGCYC	1 cut(s)	1137
FspAI	RTGCGCAY	1 cut(s)	384
FspBI	CTAG	7 cut(s)	716, 801, 1719, 1863, 2265, 2540, 2994
FspI	TGCGCA	1 cut(s)	384
GlaI	GCGC	7 cut(s)	384, 416, 2097, 2317, 2463, 2655, 2948
GsaI	CCCAGC	1 cut(s)	2001
GsuI	CTGGAG	4 cut(s)	1419, 2172, 2387, 2975
HaeII	RGCGCY	1 cut(s)	2657
HaeIII	GGCC	8 cut(s)	89, 144, 161, 2387, 2544, 2637, 2735, 2930
HapII	CCGG	8 cut(s)	86, 145, 158, 437, 492, 1599, 2059, 2198
HgaI	GACGC	1 cut(s)	1414
HhaI	GCGC	7 cut(s)	385, 417, 2098, 2318, 2464, 2656, 2949
Hin6I	GCGC	7 cut(s)	383, 415, 2096, 2316, 2462, 2654, 2947
HinP1I	GCGC	7 cut(s)	383, 415, 2096, 2316, 2462, 2654, 2947
HincII	GTYRAC	1 cut(s)	1285
HindII	GTYRAC	1 cut(s)	1285
HindIII	AAGCTT	1 cut(s)	702
HpaII	CCGG	8 cut(s)	86, 145, 158, 437, 492, 1599, 2059, 2198
HphI	GGTGA	9 cut(s)	196, 338, 496, 507, 1457, 1583, 1618, 1695, 3011
Hpy166II	GTNNAC	8 cut(s)	813, 844, 995, 1021, 1034, 1155, 1285, 2076
Hpy8I	GTNNAC	8 cut(s)	813, 844, 995, 1021, 1034, 1155, 1285, 2076
Hpy99I	CGWCG	1 cut(s)	36
HpyCH4III	ACNGT	5 cut(s)	293, 322, 992, 1396, 2341
HpyCH4IV	ACGT	7 cut(s)	34, 357, 365, 997, 1270, 1533, 2581
HpyF10VI	GCNNNNNNNGC	9 cut(s)	295, 1677, 2141, 2207, 2429, 2432, 2459, 2634, 2944
HpySE526I	ACGT	7 cut(s)	34, 357, 365, 997, 1270, 1533, 2581
HspAI	GCGC	7 cut(s)	383, 415, 2096, 2316, 2462, 2654, 2947
KpnI	GGTACC	1 cut(s)	2965
KroI	GCCGGC	1 cut(s)	157
KroNI	GCCGGC	1 cut(s)	159
Ksp22I	TGATCA	2 cut(s)	805, 979
LmnI	GCTCC	8 cut(s)	721, 1132, 1588, 1909, 2153, 2661, 2876, 3008
LweI	GCATC	8 cut(s)	864, 996, 1094, 1438, 1801, 2153, 2210, 2358
MaeI	CTAG	7 cut(s)	716, 801, 1719, 1863, 2265, 2540, 2994
MaeII	ACGT	7 cut(s)	34, 357, 365, 997, 1270, 1533, 2581
MaeIII	GTNAC	5 cut(s)	202, 1266, 1606, 2158, 2500
MfeI	CAATTG	1 cut(s)	91
MflI	RGATCY	8 cut(s)	261, 433, 575, 643, 1481, 1685, 1928, 2179
MhlI	GDGCHC	5 cut(s)	291, 450, 1003, 1137, 3013
MlyI	GAGTC	6 cut(s)	553, 625, 677, 1646, 2052, 2927
MmeI	TCCRAC	3 cut(s)	331, 411, 1887
MroNI	GCCGGC	1 cut(s)	157
MroXI	GAANNNNTTC	1 cut(s)	1890
MslI	CAYNNNNRTG	1 cut(s)	3053
MspA1I	CMGCKG	2 cut(s)	2150, 2597
MspCI	CTTAAG	2 cut(s)	344, 2393
MspI	CCGG	8 cut(s)	86, 145, 158, 437, 492, 1599, 2059, 2198
MunI	CAATTG	1 cut(s)	91
Mva1269I	GAATGC	2 cut(s)	889, 2464
MvaI	CCWGG	8 cut(s)	62, 573, 621, 1139, 1934, 1966, 2366, 2651
MvnI	CGCG	3 cut(s)	1671, 2098, 2899
MwoI	GCNNNNNNNGC	9 cut(s)	295, 1677, 2141, 2207, 2429, 2432, 2459, 2634, 2944
NaeI	GCCGGC	1 cut(s)	159
NciI	CCSGG	4 cut(s)	492, 1599, 1600, 2060
NcoI	CCATGG	3 cut(s)	823, 955, 2910
NdeI	CATATG	1 cut(s)	442
NgoMIV	GCCGGC	1 cut(s)	157
NlaIV	GGNNCC	7 cut(s)	263, 290, 435, 1134, 2388, 2878, 2963
NmuCI	GTSAC	4 cut(s)	202, 1266, 1606, 2158
NsbI	TGCGCA	1 cut(s)	384
NspI	RCATGY	2 cut(s)	2690, 2953
PaeI	GCATGC	1 cut(s)	2953
PaeR7I	CTCGAG	1 cut(s)	3023
PagI	TCATGA	2 cut(s)	187, 1054
PasI	CCCWGGG	1 cut(s)	1933
PceI	AGGCCT	1 cut(s)	2544
PciI	ACATGT	1 cut(s)	2686
PcsI	WCGNNNNNNNCGW	4 cut(s)	40, 274, 2578, 3030
PctI	GAATGC	2 cut(s)	889, 2464
PdiI	GCCGGC	1 cut(s)	159
PdmI	GAANNNNTTC	1 cut(s)	1890
PflMI	CCANNNNNTGG	1 cut(s)	1875
PfoI	TCCNGGA	3 cut(s)	571, 1964, 2058
PleI	GAGTC	6 cut(s)	552, 624, 676, 1645, 2051, 2926
PmaCI	CACGTG	1 cut(s)	2582
PmlI	CACGTG	1 cut(s)	2582
PpsI	GAGTC	6 cut(s)	552, 624, 676, 1645, 2051, 2926
Ppu21I	YACGTR	1 cut(s)	2582
PscI	ACATGT	1 cut(s)	2686
PshBI	ATTAAT	2 cut(s)	117, 1046
Psp1406I	AACGTT	2 cut(s)	357, 1533
Psp6I	CCWGG	8 cut(s)	60, 571, 619, 1137, 1932, 1964, 2364, 2649
PspCI	CACGTG	1 cut(s)	2582
PspEI	GGTNACC	1 cut(s)	202
PspFI	CCCAGC	1 cut(s)	1997
PspGI	CCWGG	8 cut(s)	60, 571, 619, 1137, 1932, 1964, 2364, 2649
PspN4I	GGNNCC	7 cut(s)	263, 290, 435, 1134, 2388, 2878, 2963
PspPI	GGNCC	5 cut(s)	959, 1196, 2386, 2733, 2929
PspXI	VCTCGAGB	1 cut(s)	3023
PsrI	GAACNNNNNNTAC	2 cut(s)	1728, 1760
PstI	CTGCAG	2 cut(s)	1646, 2413
PstNI	CAGNNNCTG	3 cut(s)	578, 626, 2313
PsuI	RGATCY	8 cut(s)	261, 433, 575, 643, 1481, 1685, 1928, 2179
PvuII	CAGCTG	2 cut(s)	2150, 2597
RsaI	GTAC	5 cut(s)	496, 1867, 2127, 2760, 2963
RsaNI	GTAC	5 cut(s)	495, 1866, 2126, 2759, 2962
RseI	CAYNNNNRTG	1 cut(s)	3053
Sau96I	GGNCC	5 cut(s)	959, 1196, 2386, 2733, 2929
SchI	GAGTC	6 cut(s)	553, 625, 677, 1646, 2052, 2927
SduI	GDGCHC	5 cut(s)	291, 450, 1003, 1137, 3013
SfaNI	GCATC	8 cut(s)	864, 996, 1094, 1438, 1801, 2153, 2210, 2358
SfcI	CTRYAG	5 cut(s)	627, 856, 1642, 2409, 2716
Sfr274I	CTCGAG	1 cut(s)	3023
SinI	GGWCC	2 cut(s)	959, 1196
SlaI	CTCGAG	1 cut(s)	3023
SmaI	CCCGGG	1 cut(s)	1600
SmiMI	CAYNNNNRTG	1 cut(s)	3053
SmlI	CTYRAG	6 cut(s)	138, 344, 1275, 2393, 2846, 3023
SmoI	CTYRAG	6 cut(s)	138, 344, 1275, 2393, 2846, 3023
SpeI	ACTAGT	1 cut(s)	2993
SphI	GCATGC	1 cut(s)	2953
SseBI	AGGCCT	1 cut(s)	2544
SsiI	CCGC	7 cut(s)	709, 1509, 2638, 2659, 2770, 2857, 2899
SspI	AATATT	1 cut(s)	115
SspMI	CTAG	7 cut(s)	716, 801, 1719, 1863, 2265, 2540, 2994
StuI	AGGCCT	1 cut(s)	2544
StyI	CCWWGG	3 cut(s)	823, 955, 2910
TaaI	ACNGT	5 cut(s)	293, 322, 992, 1396, 2341
TaiI	ACGT	7 cut(s)	37, 360, 368, 1000, 1273, 1536, 2584
TaqI	TCGA	4 cut(s)	554, 2871, 2916, 3024
TatI	WGTACW	2 cut(s)	2125, 2758
TauI	GCSGC	2 cut(s)	712, 2640
TscAI	CASTG	6 cut(s)	61, 997, 1651, 1855, 2163, 2292
TseFI	GTSAC	4 cut(s)	202, 1266, 1606, 2158
Tsp45I	GTSAC	4 cut(s)	202, 1266, 1606, 2158
TspGWI	ACGGA	3 cut(s)	266, 1225, 1562
TspMI	CCCGGG	1 cut(s)	1598
TspRI	CASTG	6 cut(s)	61, 997, 1651, 1855, 2163, 2292
Van91I	CCANNNNNTGG	1 cut(s)	1875
Vha464I	CTTAAG	2 cut(s)	344, 2393
VpaK11BI	GGWCC	2 cut(s)	959, 1196
VspI	ATTAAT	2 cut(s)	117, 1046
XagI	CCTNNNNNAGG	1 cut(s)	1963
XapI	RAATTY	9 cut(s)	403, 755, 1058, 1105, 1412, 1428, 1658, 1764, 2053
XceI	RCATGY	2 cut(s)	2690, 2953
XhoI	CTCGAG	1 cut(s)	3023
XmaI	CCCGGG	1 cut(s)	1598
XmiI	GTMKAC	2 cut(s)	1020, 1154
XmnI	GAANNNNTTC	1 cut(s)	1890
XspI	CTAG	7 cut(s)	716, 801, 1719, 1863, 2265, 2540, 2994

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.