Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0005602

Physical Location & Seq

Genomic Coordinates Forward (+)

777979 .. 784078

Gene Structure 6100 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1007600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGGGTTTATTGGTTGATTCAAATGGGGAAGGGGGCGGCGGAGAAGGTGGAAGAAATGGCGGTTCATGGGGCGGTCGGAATAGTTTGATACGGCGGAAGCAGGTGGATTCTGTTAATGTGAAGTCAGGGGGTCATCAATTGGCGAAGGAGTTGGCTGTTCCCCATCTTGTTGCAGTTGGGGTTGGCTCAACGATTGGAGCAGGAGTCTATATTCTTGTTGGAACAGTTGCTAGAGAGCATTCTGGACCAGCACTAGCAATTTCCTTTCTAATAGCTGGAATTGCGGCAGCCCTTTCCGCCTTTTGTTATGCTGAACTTGCAAGTCGGTGCCCTTCTGCAGGGAGTGCCTACCACTATACATATATATGCATTGGAGAAGGTGTCGCTTGGTTAGTCGGTTGGGCTTTGATTCTAGAATATACAATTGGTGGCTCAGCTGTTGCTCGGGGCATATCACCTAATCTGGCATTACTTTTTGGAGGAGAGGGCAGTCTGCCTGCTTTTATAGCCCGTCAACATATTCCTGCACTTGGTCTGGTGGTTGACCCATGTGCAGCAATTCTAGTAGTTATTGTTACAGGGCTCTTGTGTGTGGGAATAAAGGAGAGTACAGTAGCACAAGGCATTGTGACGATAGCAAATGCATGTGCAATGATATTTGTTGTAGTAGCTGGTACTTATCTGGGTTTCAAGTCTGGCTGGACTGGATATGAACTTCCTACTGGGTACTTTCCCTTTGGGGTGAATGGTATGCTTGCTGGGTCTGCAACTGTCTTCTTTGCATACATTGGTTTTGATTCAGTTGCCAGCACTGCTGAAGAGGTGAAGAATCCTCAACAAGATTTGCCACTCGTGCCTTATTATGCAATGGATCCTGATACACCCATTTCCAGTGCATTTGCTAGTCATGGGATGCAGTGGGCAGCGTATGTGATAACTGTTGGAGCTGTTACTGCTCTCTGCTCAACATTGATGGGCTCTATTCTTCCTCAGCCACGAATCCTGATGGCAATGTCTAGAGATGGATTGTTGCCGCCATTTTTAGCGGATATTAATAAAAAAACTCAGGCTCCTGTCAAGAGTACATTAGCAACTGGGATTTGTTCTGCAGTCTTGGCCTTCTTCATGGATGTTTCAGTGTTGGCAGGAATGGTTAGCGTGGGTACACTTGTTGCATTCACTATGGTAGCAATATCTGTACTGATAATCAGATATGTTCCACCAGATGAGGTGCCTTTGCCTTCATCTCTTCGCGAGTCCATTGATTCAGTGTGGTTGCGGCATGGAAGGAATTCTCAAGAGGTCAAGGGGGACAATCCTAAGACTAAGATTAATGTTAGTTCTTCGGAGGAGAGTACCAAACCTCTACTTGAGAAAGTGGATATCATGGTTGAACTTCCTCTGATCGGAAAGCAACTGCCTCTTATTAACTACACGTTAAGTGAAGATAATAGGCGTAAAGTTGCTGGCTGGACCATAATGTTCACATGTGTCGGCGTGCTTCTTCTGACATATTCAGCATCAGATTTGGCCCTCCCCAGCTTTCTTCGCTATACATTATGTGGGGGTGGCGGTATTCTTCTTTTATTAGGTCTGATTGTGCTCACATGTATTGATCAAGATGATGCACGACACACCTTTGGGCACACAGGAGGTTTCTTATGCCCATTTGTGCCATTGCTACCTATTGTCTGCATTCTCATCAACGTCTACCTACTGATTAATCTTGAGGCGGACACCTGGGCGCGTGTTGCTGTATGGCTGCTAATAGGAGTGGTGATTTACGTATTTTATGGCCGATCGCACAGCTCATTGGGGGATGCAGTTTACGTGCCAGTAGCTCACGTCGATGAAATCTTTCGGAGCTCAGGAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0008150 GO:0009705 GO:0012505 GO:0016020 GO:0031090 GO:0031967 GO:0031975 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048878 GO:0050801 GO:0055081 GO:0065007 GO:0065008 GO:0080144 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko05206 map05206

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

626

Amino Acids

65.86

Weight (kDa)

5.9

Isoelectric Point (pI)

33.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease	PF00324	55 - 284	1.2e-18	Amino acid permease
AA_permease_2	PF13520	56 - 285	7.7e-24	Amino acid permease
AA_permease	PF00324	294 - 402	3.7e-09	Amino acid permease
AA_permease_2	PF13520	296 - 410	3.3e-16	Amino acid permease
AA_permease_C	PF13906	553 - 603	3.9e-22	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005602)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58030 AT5G36940
fragaria_vesca	FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560
malus_domestica	MD12G1010500.v1.1 MD14G1007600.v1.1
prunus_persica	Prupe.7G012500_v2.0.a1 Prupe.7G012500_v2.0.a1 Prupe.7G012500_v2.0.a1
pyrus_communis	pycom12g00820 pycom14g00610
rosa_chinensis	RchiOBHm_Chr3g0496211
rosa_laevigata	RLG00000022551
rosa_roxburghii	Rroxscaffold_6G00389450
rosa_rugosa	Rorug03G0280500
rosa_samantha	Rh3AG327600 Rh3BG363200 Rh3BG363600 Rh3CG360600 Rh3DG363600
rosa_wichuraiana	Rw3G028690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	91
Acc36I	ACCTGC	1 cut(s)	91
AccB1I	GGYRCC	2 cut(s)	327, 1231
AccI	GTMKAC	1 cut(s)	1710
AccII	CGCG	2 cut(s)	1254, 1747
AclWI	GGATC	2 cut(s)	866, 879
AcoI	YGGCCR	1 cut(s)	1795
AcsI	RAATTY	1 cut(s)	1291
AcuI	CTGAAG	1 cut(s)	837
AfaI	GTAC	7 cut(s)	610, 676, 728, 1084, 1165, 1200, 1357
AfiI	CCNNNNNNNGG	3 cut(s)	338, 530, 1406
AflIII	ACRYGT	3 cut(s)	1434, 1487, 1607
AgsI	TTSAA	3 cut(s)	21, 691, 1394
AjiI	CACGTC	1 cut(s)	1846
AjnI	CCWGG	1 cut(s)	1739
AjuI	GAANNNNNNNTTGG	2 cut(s)	408, 440
AluBI	AGCT	8 cut(s)	275, 437, 671, 947, 1542, 1809, 1841, 1866
AluI	AGCT	8 cut(s)	275, 437, 671, 947, 1542, 1809, 1841, 1866
Alw21I	GWGCWC	2 cut(s)	1605, 1868
AlwI	GGATC	2 cut(s)	866, 879
Ama87I	CYCGRG	1 cut(s)	444
AoxI	GGCC	3 cut(s)	1116, 1530, 1795
ApeKI	GCWGC	4 cut(s)	287, 554, 923, 1762
ApoI	RAATTY	1 cut(s)	1291
AseI	ATTAAT	3 cut(s)	1053, 1332, 1722
Asp700I	GAANNNNTTC	2 cut(s)	1291, 1857
AspLEI	GCGC	1 cut(s)	1747
AspS9I	GGNCC	3 cut(s)	245, 1473, 1531
AsuHPI	GGTGA	4 cut(s)	447, 754, 835, 1789
AvaI	CYCGRG	1 cut(s)	444
AvaII	GGWCC	2 cut(s)	245, 1473
BaeGI	GKGCMC	2 cut(s)	332, 1647
BaeI	ACNNNNGTAYC	2 cut(s)	1155, 1188
BamHI	GGATCC	1 cut(s)	871
BanI	GGYRCC	2 cut(s)	327, 1231
BanII	GRGCYC	3 cut(s)	585, 980, 1868
BauI	CACGAG	1 cut(s)	851
BbsI	GAAGAC	1 cut(s)	766
Bbv12I	GWGCWC	2 cut(s)	1605, 1868
BbvCI	CCTCAGC	1 cut(s)	990
BbvI	GCAGC	4 cut(s)	299, 566, 935, 1749
BccI	CCATC	4 cut(s)	171, 967, 1000, 1016
BceAI	ACGGC	1 cut(s)	107
BciT130I	CCWGG	1 cut(s)	1741
BclI	TGATCA	1 cut(s)	1615
BfaI	CTAG	6 cut(s)	231, 254, 413, 563, 903, 1017
BfmI	CTRYAG	2 cut(s)	336, 1107
BfuAI	ACCTGC	1 cut(s)	91
BisI	GCNGC	8 cut(s)	37, 285, 288, 555, 924, 1034, 1280, 1763
BlpI	GCTNAGC	1 cut(s)	433
BlsI	GCNGC	8 cut(s)	38, 286, 289, 556, 925, 1035, 1281, 1764
Bme1390I	CCNGG	1 cut(s)	1741
Bme18I	GGWCC	2 cut(s)	245, 1473
BmeT110I	CYCGRG	1 cut(s)	444
BmgBI	CACGTC	1 cut(s)	1846
BmgT120I	GGNCC	3 cut(s)	245, 1473, 1531
BmiI	GGNNCC	4 cut(s)	329, 873, 1071, 1233
BmrFI	CCNGG	1 cut(s)	1741
BmrI	ACTGGG	2 cut(s)	732, 1104
BmsI	GCATC	4 cut(s)	903, 1529, 1615, 1810
BmuI	ACTGGG	2 cut(s)	732, 1104
BpiI	GAAGAC	1 cut(s)	766
Bpu10I	CCTNAGC	2 cut(s)	990, 1867
Bpu1102I	GCTNAGC	1 cut(s)	433
BpuEI	CTTGAG	3 cut(s)	1281, 1391, 1748
BsaAI	YACGTR	2 cut(s)	1786, 1831
BsaJI	CCNNGG	1 cut(s)	1740
BsaXI	ACNNNNNCTCC	6 cut(s)	189, 219, 366, 396, 1054, 1084
Bsc4I	CCNNNNNNNGG	3 cut(s)	338, 530, 1406
Bse1I	ACTGG	5 cut(s)	709, 727, 891, 1099, 1835
Bse3DI	GCAATG	4 cut(s)	657, 873, 1017, 1676
BseBI	CCWGG	1 cut(s)	1741
BseDI	CCNNGG	1 cut(s)	1740
BseGI	GGATG	3 cut(s)	918, 1135, 1825
BseLI	CCNNNNNNNGG	3 cut(s)	338, 530, 1406
BseMI	GCAATG	4 cut(s)	657, 873, 1017, 1676
BseMII	CTCAG	3 cut(s)	447, 1004, 1079
BseNI	ACTGG	5 cut(s)	709, 727, 891, 1099, 1835
BseRI	GAGGAG	2 cut(s)	495, 1364
BseSI	GKGCMC	2 cut(s)	332, 1647
BseXI	GCAGC	4 cut(s)	299, 566, 935, 1749
BseYI	CCCAGC	2 cut(s)	758, 1538
BsgI	GTGCAG	2 cut(s)	510, 573
Bsh1236I	CGCG	2 cut(s)	1254, 1747
Bsh1285I	CGRYCG	2 cut(s)	76, 1802
BshFI	GGCC	3 cut(s)	1118, 1532, 1797
BshNI	GGYRCC	2 cut(s)	327, 1231
BsiEI	CGRYCG	2 cut(s)	76, 1802
BsiHKAI	GWGCWC	2 cut(s)	1605, 1868
BsiHKCI	CYCGRG	1 cut(s)	444
BslFI	GGGAC	1 cut(s)	1325
BslI	CCNNNNNNNGG	3 cut(s)	338, 530, 1406
BsmFI	GGGAC	1 cut(s)	1325
BsmI	GAATGC	3 cut(s)	238, 1175, 1695
BsnI	GGCC	3 cut(s)	1118, 1532, 1797
BsoBI	CYCGRG	1 cut(s)	444
Bsp1286I	GDGCHC	6 cut(s)	332, 585, 980, 1605, 1647, 1868
Bsp143I	GATC	4 cut(s)	871, 1404, 1615, 1799
Bsp1720I	GCTNAGC	1 cut(s)	433
Bsp68I	TCGCGA	1 cut(s)	1254
BspANI	GGCC	3 cut(s)	1118, 1532, 1797
BspCNI	CTCAG	3 cut(s)	446, 1003, 1078
BspFNI	CGCG	2 cut(s)	1254, 1747
BspLI	GGNNCC	4 cut(s)	329, 873, 1071, 1233
BspMAI	CTGCAG	2 cut(s)	340, 1111
BspMI	ACCTGC	1 cut(s)	91
BspPI	GGATC	2 cut(s)	866, 879
BspT107I	GGYRCC	2 cut(s)	327, 1231
BsrDI	GCAATG	4 cut(s)	657, 873, 1017, 1676
BsrI	ACTGG	5 cut(s)	709, 727, 891, 1099, 1835
BssECI	CCNNGG	1 cut(s)	1740
BssMI	GATC	4 cut(s)	871, 1404, 1615, 1799
BssSI	CACGAG	1 cut(s)	851
Bst2BI	CACGAG	1 cut(s)	851
Bst2UI	CCWGG	1 cut(s)	1741
Bst4CI	ACNGT	4 cut(s)	226, 613, 772, 940
Bst6I	CTCTTC	2 cut(s)	813, 1254
BstAPI	GCANNNNNTGC	1 cut(s)	344
BstBAI	YACGTR	2 cut(s)	1786, 1831
BstC8I	GCNNGC	5 cut(s)	498, 756, 808, 1468, 1499
BstDEI	CTNAG	6 cut(s)	433, 990, 1065, 1320, 1326, 1867
BstENI	CCTNNNNNAGG	1 cut(s)	336
BstF5I	GGATG	3 cut(s)	918, 1135, 1825
BstFNI	CGCG	2 cut(s)	1254, 1747
BstHHI	GCGC	1 cut(s)	1747
BstKTI	GATC	4 cut(s)	874, 1407, 1618, 1802
BstMBI	GATC	4 cut(s)	871, 1404, 1615, 1799
BstMCI	CGRYCG	2 cut(s)	76, 1802
BstNI	CCWGG	1 cut(s)	1741
BstNSI	RCATGY	3 cut(s)	648, 1491, 1611
BstSCI	CCNGG	1 cut(s)	1739
BstSFI	CTRYAG	2 cut(s)	336, 1107
BstSLI	GKGCMC	2 cut(s)	332, 1647
BstSNI	TACGTA	1 cut(s)	1786
BstUI	CGCG	2 cut(s)	1254, 1747
BstV1I	GCAGC	4 cut(s)	299, 566, 935, 1749
BstV2I	GAAGAC	1 cut(s)	766
BstX2I	RGATCY	1 cut(s)	871
BstYI	RGATCY	1 cut(s)	871
BsuRI	GGCC	3 cut(s)	1118, 1532, 1797
BtrI	CACGTC	1 cut(s)	1846
BtsCI	GGATG	3 cut(s)	918, 1135, 1825
BtsI	GCAGTG	2 cut(s)	810, 923
BtsIMutI	CAGTG	5 cut(s)	810, 898, 923, 1143, 1275
BtuMI	TCGCGA	1 cut(s)	1254
BveI	ACCTGC	1 cut(s)	91
Cac8I	GCNNGC	5 cut(s)	498, 756, 808, 1468, 1499
CfoI	GCGC	1 cut(s)	1747
Cfr13I	GGNCC	3 cut(s)	245, 1473, 1531
Csp6I	GTAC	7 cut(s)	609, 675, 727, 1083, 1164, 1199, 1356
CviAII	CATG	9 cut(s)	66, 549, 645, 908, 1126, 1283, 1387, 1488, 1608
CviQI	GTAC	7 cut(s)	609, 675, 727, 1083, 1164, 1199, 1356
DdeI	CTNAG	6 cut(s)	433, 990, 1065, 1320, 1326, 1867
DpnI	GATC	4 cut(s)	873, 1406, 1617, 1801
DpnII	GATC	4 cut(s)	871, 1404, 1615, 1799
EaeI	YGGCCR	1 cut(s)	1795
Eam1104I	CTCTTC	2 cut(s)	813, 1254
EarI	CTCTTC	2 cut(s)	813, 1254
EciI	GGCGGA	4 cut(s)	54, 109, 286, 1748
Ecl136II	GAGCTC	1 cut(s)	1866
Eco105I	TACGTA	1 cut(s)	1786
Eco24I	GRGCYC	3 cut(s)	585, 980, 1868
Eco32I	GATATC	1 cut(s)	1384
Eco47I	GGWCC	2 cut(s)	245, 1473
Eco53kI	GAGCTC	1 cut(s)	1866
Eco57I	CTGAAG	1 cut(s)	837
Eco88I	CYCGRG	1 cut(s)	444
EcoICRI	GAGCTC	1 cut(s)	1866
EcoNI	CCTNNNNNAGG	1 cut(s)	336
EcoRI	GAATTC	1 cut(s)	1291
EcoRII	CCWGG	1 cut(s)	1739
EcoRV	GATATC	1 cut(s)	1384
EcoT22I	ATGCAT	2 cut(s)	371, 646
EcoT38I	GRGCYC	3 cut(s)	585, 980, 1868
FaeI	CATG	9 cut(s)	69, 552, 648, 911, 1129, 1286, 1390, 1491, 1611
FaqI	GGGAC	1 cut(s)	1325
FatI	CATG	9 cut(s)	65, 548, 644, 907, 1125, 1282, 1386, 1487, 1607
FbaI	TGATCA	1 cut(s)	1615
FblI	GTMKAC	1 cut(s)	1710
Fnu4HI	GCNGC	8 cut(s)	37, 285, 288, 555, 924, 1034, 1280, 1763
FokI	GGATG	3 cut(s)	925, 1142, 1832
FriOI	GRGCYC	3 cut(s)	585, 980, 1868
Fsp4HI	GCNGC	8 cut(s)	37, 285, 288, 555, 924, 1034, 1280, 1763
FspBI	CTAG	6 cut(s)	231, 254, 413, 563, 903, 1017
GlaI	GCGC	1 cut(s)	1746
GluI	GCNGC	8 cut(s)	37, 285, 288, 555, 924, 1034, 1280, 1763
GsaI	CCCAGC	2 cut(s)	762, 1542
HaeIII	GGCC	3 cut(s)	1118, 1532, 1797
HhaI	GCGC	1 cut(s)	1747
Hin1II	CATG	9 cut(s)	69, 552, 648, 911, 1129, 1286, 1390, 1491, 1611
Hin6I	GCGC	1 cut(s)	1745
HinP1I	GCGC	1 cut(s)	1745
HincII	GTYRAC	2 cut(s)	515, 544
HindII	GTYRAC	2 cut(s)	515, 544
HinfI	GANTC	9 cut(s)	17, 107, 204, 409, 797, 829, 999, 1256, 1265
HphI	GGTGA	4 cut(s)	447, 754, 835, 1789
Hpy166II	GTNNAC	6 cut(s)	515, 544, 1166, 1485, 1711, 1828
Hpy188I	TCNGA	9 cut(s)	78, 1211, 1348, 1404, 1409, 1509, 1525, 1596, 1863
Hpy8I	GTNNAC	6 cut(s)	515, 544, 1166, 1485, 1711, 1828
Hpy99I	CGWCG	1 cut(s)	1850
HpyAV	CCTTC	8 cut(s)	23, 38, 139, 342, 371, 1129, 1251, 1281
HpyCH4III	ACNGT	4 cut(s)	226, 613, 772, 940
HpyCH4IV	ACGT	5 cut(s)	1436, 1707, 1785, 1830, 1845
HpyF3I	CTNAG	6 cut(s)	433, 990, 1065, 1320, 1326, 1867
HpySE526I	ACGT	5 cut(s)	1436, 1707, 1785, 1830, 1845
Hsp92II	CATG	9 cut(s)	69, 552, 648, 911, 1129, 1286, 1390, 1491, 1611
HspAI	GCGC	1 cut(s)	1745
Ksp22I	TGATCA	1 cut(s)	1615
Kzo9I	GATC	4 cut(s)	871, 1404, 1615, 1799
LmnI	GCTCC	4 cut(s)	197, 944, 1075, 1863
Lsp1109I	GCAGC	4 cut(s)	299, 566, 935, 1749
LweI	GCATC	4 cut(s)	903, 1529, 1615, 1810
MaeI	CTAG	6 cut(s)	231, 254, 413, 563, 903, 1017
MaeII	ACGT	5 cut(s)	1436, 1707, 1785, 1830, 1845
MaeIII	GTNAC	3 cut(s)	574, 628, 949
MalI	GATC	4 cut(s)	873, 1406, 1617, 1801
MboI	GATC	4 cut(s)	871, 1404, 1615, 1799
MfeI	CAATTG	2 cut(s)	137, 423
MflI	RGATCY	1 cut(s)	871
MhlI	GDGCHC	6 cut(s)	332, 585, 980, 1605, 1647, 1868
MluCI	AATT	7 cut(s)	137, 258, 279, 423, 558, 1291, 1873
MlyI	GAGTC	2 cut(s)	213, 1265
MmeI	TCCRAC	3 cut(s)	56, 199, 922
Mph1103I	ATGCAT	2 cut(s)	371, 646
MroXI	GAANNNNTTC	2 cut(s)	1291, 1857
MseI	TTAA	6 cut(s)	114, 1053, 1332, 1428, 1439, 1722
MslI	CAYNNNNRTG	2 cut(s)	364, 1848
MspA1I	CMGCKG	1 cut(s)	437
MspR9I	CCNGG	1 cut(s)	1741
MunI	CAATTG	2 cut(s)	137, 423
Mva1269I	GAATGC	3 cut(s)	238, 1175, 1695
MvaI	CCWGG	1 cut(s)	1741
MvnI	CGCG	2 cut(s)	1254, 1747
NdeII	GATC	4 cut(s)	871, 1404, 1615, 1799
NlaIII	CATG	9 cut(s)	69, 552, 648, 911, 1129, 1286, 1390, 1491, 1611
NlaIV	GGNNCC	4 cut(s)	329, 873, 1071, 1233
NmuCI	GTSAC	1 cut(s)	628
NruI	TCGCGA	1 cut(s)	1254
NsiI	ATGCAT	2 cut(s)	371, 646
NspI	RCATGY	3 cut(s)	648, 1491, 1611
PaqCI	CACCTGC	1 cut(s)	91
PciI	ACATGT	2 cut(s)	1487, 1607
PctI	GAATGC	3 cut(s)	238, 1175, 1695
PdmI	GAANNNNTTC	2 cut(s)	1291, 1857
PfeI	GAWTC	7 cut(s)	17, 107, 409, 797, 829, 999, 1265
PkrI	GCNGC	8 cut(s)	38, 286, 289, 556, 925, 1035, 1281, 1764
Ple19I	CGATCG	1 cut(s)	1802
PleI	GAGTC	2 cut(s)	212, 1264
PpsI	GAGTC	2 cut(s)	212, 1264
Ppu21I	YACGTR	2 cut(s)	1786, 1831
PscI	ACATGT	2 cut(s)	1487, 1607
PshBI	ATTAAT	3 cut(s)	1053, 1332, 1722
Psp124BI	GAGCTC	1 cut(s)	1868
Psp6I	CCWGG	1 cut(s)	1739
PspFI	CCCAGC	2 cut(s)	758, 1538
PspGI	CCWGG	1 cut(s)	1739
PspN4I	GGNNCC	4 cut(s)	329, 873, 1071, 1233
PspPI	GGNCC	3 cut(s)	245, 1473, 1531
PstI	CTGCAG	2 cut(s)	340, 1111
PsuI	RGATCY	1 cut(s)	871
PvuI	CGATCG	1 cut(s)	1802
PvuII	CAGCTG	1 cut(s)	437
RruI	TCGCGA	1 cut(s)	1254
RsaI	GTAC	7 cut(s)	610, 676, 728, 1084, 1165, 1200, 1357
RsaNI	GTAC	7 cut(s)	609, 675, 727, 1083, 1164, 1199, 1356
RseI	CAYNNNNRTG	2 cut(s)	364, 1848
SacI	GAGCTC	1 cut(s)	1868
SaqAI	TTAA	6 cut(s)	114, 1053, 1332, 1428, 1439, 1722
SatI	GCNGC	8 cut(s)	37, 285, 288, 555, 924, 1034, 1280, 1763
Sau3AI	GATC	4 cut(s)	871, 1404, 1615, 1799
Sau96I	GGNCC	3 cut(s)	245, 1473, 1531
SchI	GAGTC	2 cut(s)	213, 1265
ScrFI	CCNGG	1 cut(s)	1741
SduI	GDGCHC	6 cut(s)	332, 585, 980, 1605, 1647, 1868
SfaNI	GCATC	4 cut(s)	903, 1529, 1615, 1810
SfcI	CTRYAG	2 cut(s)	336, 1107
SinI	GGWCC	2 cut(s)	245, 1473
SmiMI	CAYNNNNRTG	2 cut(s)	364, 1848
SmlI	CTYRAG	3 cut(s)	1296, 1370, 1727
SmoI	CTYRAG	3 cut(s)	1296, 1370, 1727
SnaBI	TACGTA	1 cut(s)	1786
Sse9I	AATT	7 cut(s)	137, 258, 279, 423, 558, 1291, 1873
SspMI	CTAG	6 cut(s)	231, 254, 413, 563, 903, 1017
SstI	GAGCTC	1 cut(s)	1868
StyD4I	CCNGG	1 cut(s)	1739
TaaI	ACNGT	4 cut(s)	226, 613, 772, 940
TaiI	ACGT	5 cut(s)	1439, 1710, 1788, 1833, 1848
TaqI	TCGA	1 cut(s)	1848
TasI	AATT	7 cut(s)	137, 258, 279, 423, 558, 1291, 1873
TatI	WGTACW	3 cut(s)	608, 1082, 1198
TauI	GCSGC	4 cut(s)	39, 287, 1036, 1282
TfiI	GAWTC	7 cut(s)	17, 107, 409, 797, 829, 999, 1265
Tru1I	TTAA	6 cut(s)	114, 1053, 1332, 1428, 1439, 1722
Tru9I	TTAA	6 cut(s)	114, 1053, 1332, 1428, 1439, 1722
TscAI	CASTG	5 cut(s)	817, 898, 923, 1143, 1275
TseFI	GTSAC	1 cut(s)	628
TseI	GCWGC	4 cut(s)	287, 554, 923, 1762
Tsp45I	GTSAC	1 cut(s)	628
TspDTI	ATGAA	5 cut(s)	54, 726, 1114, 1233, 1866
TspRI	CASTG	5 cut(s)	817, 898, 923, 1143, 1275
VpaK11BI	GGWCC	2 cut(s)	245, 1473
VspI	ATTAAT	3 cut(s)	1053, 1332, 1722
XagI	CCTNNNNNAGG	1 cut(s)	336
XapI	RAATTY	1 cut(s)	1291
XbaI	TCTAGA	2 cut(s)	412, 1016
XceI	RCATGY	3 cut(s)	648, 1491, 1611
XmiI	GTMKAC	1 cut(s)	1710
XmnI	GAANNNNTTC	2 cut(s)	1291, 1857
XspI	CTAG	6 cut(s)	231, 254, 413, 563, 903, 1017
Zsp2I	ATGCAT	2 cut(s)	371, 646

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.