Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0005602

Physical Location & Seq

Genomic Coordinates Reverse (-)

45309520 .. 45319850

Gene Structure 10331 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG363600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGGGGTTTGATTCGCAGTCGCCAGATGGTGCAAAACAATGGGGTGCTGCTGCTGCTCGTAATAGTCTGATTCGGAGGAAGCAGGTCGATTCCGTTCACCGCAAGGCTGATCATCAATTGGCCAAGGAGTTGACTGTTCCCCATCTCGTTGCGATTGGTGTGGGCTCAACAATCGGAGCGGGAGTGTATATTCTCGTCGGAACAGTTGCCAGAGAGCATTCTGGACCAGCCCTCACTGTTTCCTTTCTCATTGCCGGAATCGCCGCCGCCCTTTCGGCCTTTTGTTATGCCGAGCTTGCAAGTCGTTGCCCCTCTGCCGGAAGCGCCTATCACTACACCTACATATGCATTGGAGAAGGTGTTGCTTGGTTGGTTGGTTGGGCTTTGATTCTCGAATATACCATTGGTGGTTCGGCTGTTGCTCGTGGCATCTCCCCTAATCTGGCATTACTCTTTGGAGGAGCAGACAGTCTGCCTGTTTTTCTAGCCCGTCAATACATTCCTGCGCTTGATATTATGGTTGACCCATGTGCAGCCATTCTAGTATTTATTGTCACAGGGCTCCTGTGTGTGGGAATCAAGGAGAGTACAGTGGCACAAGGCATTGCGACGATAGCGAATGTATGTGCAATGTTATTTGTCATAGTTGCTGGTACTTATTTGGGATTTAAGACTGGCTGGTCTGGATATCAACTTCCTACTGGGTACTTCCCCTTTGGGGTGAATGGTATGCTTGCCGGGTCTGCAACTGTCTTCTTTGCTTACATTGGTTTTGATTCAGTTGCAAGCACTGCTGAAGAGGTGAAGAATCCCCAACGAGATTTACCACTGGGTATTGGTGCTGCACTATCTATATGCTGTGCATTGTATATGTTGGTTTCCATGGTCATTGTTGGTTTAGTGCCTTATCATGCAATGGATCCTGACACGCCCATCTCTACTGCATTTGCTAGCCATGGGATGCAATGGGCTGCCTATATCATTACTGTTGGAGCTGTTACTGCTCTCTGTTCGACATTGATGGGGTCTATTCTTCCGCAGCCGCGAATTCTGATGGCAATGTCTCGAGATGGATTGCTACCGCCATTTTTCTCGGAGATTAATAAAAGCACTCAGGTCCCTGTCAAGAGTACAATAGCAACTGGGATTGGTGCTGCAACCTTGGCATTCTTCATGGATGTTTCACAGTTAGCAGGAATGGTTAGTGTGGGTACACTTGTTGCATTCACTATGGTAGCAATATCTGTACTTATACTCAGATATGTCCCACCGGATGAGGTGCCTTTGCCTGCATCTCTGCAGAATTCCATTGATTCAGTGTCCTTGCGGCATGGTAGTAGTTCTCAAGATATCAGTGGGGATGATCCTAAGGGTAGTGTTGGGTCTTCCAAAGATATTTCTAAACCTCTACTTGACAAAGTGGATATCTTGGTTGAACTTCCTCTGATTGAAAAGCAACTACCCCTTGTTAACTACACACTAAGTGAAGATAACAGGCGAAAAATTGCTGGCTGGACCATAATGTTCACATGTGTAGGGGTGTTTCTCCTGACATATTCAGCTTCAAGTTTGGGCCTCCCCAGCTTTCTTCGCTATGCAGTATGTGGAGTTGGTGGTATCCTTGTTCTATTTGGTCTGATTGTGCTTACTTGTATAGATCAAGATGATGCACGGCACAGCTTTGGGCACACAGGAGGTTTCATATGCCCATTTGTTCCATTGCTTCCAATCATCTGTATTCTCATCAACGTCTACTTACTCATCAATCTTGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0008150 GO:0009705 GO:0012505 GO:0016020 GO:0031090 GO:0031967 GO:0031975 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048878 GO:0050801 GO:0055081 GO:0065007 GO:0065008 GO:0080144 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko05206 map05206

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

591

Amino Acids

62.2

Weight (kDa)

5.92

Isoelectric Point (pI)

33.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	46 - 426	1.5e-50	Amino acid permease
AA_permease	PF00324	48 - 418	2.4e-38	Amino acid permease
AA_permease_C	PF13906	567 - 591	3e-06	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005602)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58030 AT5G36940
fragaria_vesca	FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560
malus_domestica	MD12G1010500.v1.1 MD14G1007600.v1.1
prunus_persica	Prupe.7G012500_v2.0.a1 Prupe.7G012500_v2.0.a1 Prupe.7G012500_v2.0.a1
pyrus_communis	pycom12g00820 pycom14g00610
rosa_chinensis	RchiOBHm_Chr3g0496211
rosa_laevigata	RLG00000022551
rosa_roxburghii	Rroxscaffold_6G00389450
rosa_rugosa	Rorug03G0280500
rosa_samantha	Rh3AG327600 Rh3BG363200 Rh3BG363600 Rh3CG360600 Rh3DG363600
rosa_wichuraiana	Rw3G028690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	679
Acc36I	ACCTGC	1 cut(s)	73
AccB1I	GGYRCC	1 cut(s)	1279
AccBSI	CCGCTC	1 cut(s)	179
AccI	GTMKAC	1 cut(s)	1752
AccII	CGCG	1 cut(s)	1045
AciI	CCGC	8 cut(s)	100, 179, 264, 267, 1037, 1043, 1082, 1327
AclWI	GGATC	3 cut(s)	914, 927, 1358
AcoI	YGGCCR	1 cut(s)	120
AcsI	RAATTY	2 cut(s)	1047, 1303
AcuI	CTGAAG	1 cut(s)	816
AdeI	CACNNNGTG	1 cut(s)	1484
AfaI	GTAC	6 cut(s)	589, 655, 707, 1132, 1213, 1248
AfiI	CCNNNNNNNGG	4 cut(s)	317, 442, 571, 718
AflIII	ACRYGT	1 cut(s)	1529
AgsI	TTSAA	3 cut(s)	1436, 1451, 1566
AjuI	GAANNNNNNNTTGG	2 cut(s)	387, 419
AluBI	AGCT	5 cut(s)	295, 995, 1562, 1584, 1680
AluI	AGCT	5 cut(s)	295, 995, 1562, 1584, 1680
Alw26I	GTCTC	1 cut(s)	1068
AlwI	GGATC	3 cut(s)	914, 927, 1358
Ama87I	CYCGRG	1 cut(s)	1065
AoxI	GGCC	3 cut(s)	120, 276, 1573
ApeKI	GCWGC	8 cut(s)	47, 50, 53, 533, 842, 971, 1039, 1154
ApoI	RAATTY	2 cut(s)	1047, 1303
AseI	ATTAAT	1 cut(s)	1101
AspLEI	GCGC	2 cut(s)	326, 508
AspS9I	GGNCC	4 cut(s)	224, 1117, 1515, 1573
AsuC2I	CCSGG	1 cut(s)	739
AsuHPI	GGTGA	3 cut(s)	89, 733, 814
AsuNHI	GCTAGC	1 cut(s)	950
AvaI	CYCGRG	1 cut(s)	1065
AvaII	GGWCC	3 cut(s)	224, 1117, 1515
AxyI	CCTNAGG	1 cut(s)	1368
BaeGI	GKGCMC	1 cut(s)	1689
BaeI	ACNNNNGTAYC	2 cut(s)	1203, 1236
BalI	TGGCCA	1 cut(s)	122
BamHI	GGATCC	1 cut(s)	919
BanI	GGYRCC	1 cut(s)	1279
BanII	GRGCYC	2 cut(s)	167, 564
BauI	CACGAG	1 cut(s)	423
BbsI	GAAGAC	2 cut(s)	745, 1377
BbvI	GCAGC	8 cut(s)	34, 37, 40, 545, 829, 958, 1051, 1141
BccI	CCATC	6 cut(s)	20, 150, 941, 1015, 1048, 1064
BceAI	ACGGC	1 cut(s)	1688
BciVI	GTATCC	1 cut(s)	1628
BclI	TGATCA	1 cut(s)	109
BcnI	CCSGG	1 cut(s)	739
BcoDI	GTCTC	1 cut(s)	1068
BfaI	CTAG	3 cut(s)	485, 542, 951
BfmI	CTRYAG	1 cut(s)	1298
BfoI	RGCGCY	1 cut(s)	327
BfuAI	ACCTGC	1 cut(s)	73
BfuI	GTATCC	1 cut(s)	1628
BglI	GCCNNNNNGGC	1 cut(s)	275
Bme1390I	CCNGG	1 cut(s)	739
Bme18I	GGWCC	3 cut(s)	224, 1117, 1515
BmeT110I	CYCGRG	1 cut(s)	1065
BmgT120I	GGNCC	4 cut(s)	224, 1117, 1515, 1573
BmiI	GGNNCC	4 cut(s)	563, 921, 1119, 1281
BmrFI	CCNGG	1 cut(s)	739
BmrI	ACTGGG	3 cut(s)	711, 839, 1152
BmsI	GCATC	4 cut(s)	438, 951, 1301, 1657
BmtI	GCTAGC	1 cut(s)	954
BmuI	ACTGGG	3 cut(s)	711, 839, 1152
BpiI	GAAGAC	2 cut(s)	745, 1377
BpuEI	CTTGAG	1 cut(s)	1329
BpuMI	CCSGG	1 cut(s)	739
BsaJI	CCNNGG	4 cut(s)	123, 882, 955, 1161
BsaWI	WCCGGW	1 cut(s)	1270
BsaXI	ACNNNNNCTCC	4 cut(s)	168, 198, 345, 375
Bsc4I	CCNNNNNNNGG	4 cut(s)	317, 442, 571, 718
Bse1I	ACTGG	4 cut(s)	679, 706, 834, 1147
Bse21I	CCTNAGG	1 cut(s)	1368
Bse3DI	GCAATG	7 cut(s)	249, 603, 636, 921, 971, 1065, 1718
BseDI	CCNNGG	4 cut(s)	123, 882, 955, 1161
BseGI	GGATG	4 cut(s)	966, 1183, 1279, 1366
BseLI	CCNNNNNNNGG	4 cut(s)	317, 442, 571, 718
BseMI	GCAATG	7 cut(s)	249, 603, 636, 921, 971, 1065, 1718
BseMII	CTCAG	2 cut(s)	1127, 1270
BseNI	ACTGG	4 cut(s)	679, 706, 834, 1147
BseRI	GAGGAG	1 cut(s)	474
BseSI	GKGCMC	1 cut(s)	1689
BseXI	GCAGC	8 cut(s)	34, 37, 40, 545, 829, 958, 1051, 1141
BseYI	CCCAGC	1 cut(s)	1580
BsgI	GTGCAG	2 cut(s)	552, 828
Bsh1236I	CGCG	1 cut(s)	1045
BshFI	GGCC	3 cut(s)	122, 278, 1575
BshNI	GGYRCC	1 cut(s)	1279
BsiHKCI	CYCGRG	1 cut(s)	1065
BsiSI	CCGG	4 cut(s)	255, 318, 738, 1271
BslFI	GGGAC	2 cut(s)	1103, 1250
BslI	CCNNNNNNNGG	4 cut(s)	317, 442, 571, 718
BsmAI	GTCTC	1 cut(s)	1068
BsmFI	GGGAC	2 cut(s)	1103, 1250
BsmI	GAATGC	3 cut(s)	217, 1166, 1223
BsnI	GGCC	3 cut(s)	122, 278, 1575
BsoBI	CYCGRG	1 cut(s)	1065
Bsp1286I	GDGCHC	3 cut(s)	167, 564, 1689
Bsp143I	GATC	4 cut(s)	109, 919, 1363, 1657
Bsp19I	CCATGG	2 cut(s)	882, 955
BspACI	CCGC	8 cut(s)	100, 179, 264, 267, 1037, 1043, 1082, 1327
BspANI	GGCC	3 cut(s)	122, 278, 1575
BspCNI	CTCAG	2 cut(s)	1126, 1269
BspFNI	CGCG	1 cut(s)	1045
BspLI	GGNNCC	4 cut(s)	563, 921, 1119, 1281
BspMAI	CTGCAG	1 cut(s)	1302
BspMI	ACCTGC	1 cut(s)	73
BspOI	GCTAGC	1 cut(s)	954
BspPI	GGATC	3 cut(s)	914, 927, 1358
BspT107I	GGYRCC	1 cut(s)	1279
BsrBI	CCGCTC	1 cut(s)	179
BsrDI	GCAATG	7 cut(s)	249, 603, 636, 921, 971, 1065, 1718
BsrI	ACTGG	4 cut(s)	679, 706, 834, 1147
BssECI	CCNNGG	4 cut(s)	123, 882, 955, 1161
BssMI	GATC	4 cut(s)	109, 919, 1363, 1657
BssSI	CACGAG	1 cut(s)	423
BssT1I	CCWWGG	4 cut(s)	123, 882, 955, 1161
Bst2BI	CACGAG	1 cut(s)	423
Bst4CI	ACNGT	8 cut(s)	136, 205, 238, 470, 592, 751, 988, 1188
Bst6I	CTCTTC	1 cut(s)	792
BstAPI	GCANNNNNTGC	1 cut(s)	791
BstC8I	GCNNGC	6 cut(s)	297, 735, 787, 952, 1290, 1510
BstDEI	CTNAG	4 cut(s)	1113, 1256, 1368, 1481
BstDSI	CCRYGG	2 cut(s)	882, 955
BstF5I	GGATG	4 cut(s)	966, 1183, 1279, 1366
BstFNI	CGCG	1 cut(s)	1045
BstH2I	RGCGCY	1 cut(s)	327
BstHHI	GCGC	2 cut(s)	326, 508
BstKTI	GATC	4 cut(s)	112, 922, 1366, 1660
BstMAI	GTCTC	1 cut(s)	1068
BstMBI	GATC	4 cut(s)	109, 919, 1363, 1657
BstNSI	RCATGY	1 cut(s)	1533
BstSCI	CCNGG	1 cut(s)	737
BstSFI	CTRYAG	1 cut(s)	1298
BstSLI	GKGCMC	1 cut(s)	1689
BstUI	CGCG	1 cut(s)	1045
BstV1I	GCAGC	8 cut(s)	34, 37, 40, 545, 829, 958, 1051, 1141
BstV2I	GAAGAC	2 cut(s)	745, 1377
BstX2I	RGATCY	1 cut(s)	919
BstYI	RGATCY	1 cut(s)	919
Bsu36I	CCTNAGG	1 cut(s)	1368
BsuI	GTATCC	1 cut(s)	1628
BsuRI	GGCC	3 cut(s)	122, 278, 1575
BtgI	CCRYGG	2 cut(s)	882, 955
BtsCI	GGATG	4 cut(s)	966, 1183, 1279, 1366
BtsI	GCAGTG	1 cut(s)	789
BtsIMutI	CAGTG	6 cut(s)	234, 597, 789, 827, 1323, 1360
BveI	ACCTGC	1 cut(s)	73
Cac8I	GCNNGC	6 cut(s)	297, 735, 787, 952, 1290, 1510
CfoI	GCGC	2 cut(s)	326, 508
Cfr13I	GGNCC	4 cut(s)	224, 1117, 1515, 1573
Csp6I	GTAC	6 cut(s)	588, 654, 706, 1131, 1212, 1247
CviAII	CATG	7 cut(s)	528, 883, 911, 956, 1174, 1331, 1530
CviQI	GTAC	6 cut(s)	588, 654, 706, 1131, 1212, 1247
DdeI	CTNAG	4 cut(s)	1113, 1256, 1368, 1481
DpnI	GATC	4 cut(s)	111, 921, 1365, 1659
DpnII	GATC	4 cut(s)	109, 919, 1363, 1657
DraIII	CACNNNGTG	1 cut(s)	1484
DrdI	GACNNNNNNGTC	1 cut(s)	679
DseDI	GACNNNNNNGTC	1 cut(s)	679
EaeI	YGGCCR	1 cut(s)	120
Eam1104I	CTCTTC	1 cut(s)	792
EarI	CTCTTC	1 cut(s)	792
Eco130I	CCWWGG	4 cut(s)	123, 882, 955, 1161
Eco24I	GRGCYC	2 cut(s)	167, 564
Eco32I	GATATC	3 cut(s)	689, 1351, 1426
Eco47I	GGWCC	3 cut(s)	224, 1117, 1515
Eco57I	CTGAAG	1 cut(s)	816
Eco81I	CCTNAGG	1 cut(s)	1368
Eco88I	CYCGRG	1 cut(s)	1065
EcoO109I	RGGNCCY	1 cut(s)	1117
EcoRI	GAATTC	2 cut(s)	1047, 1303
EcoRV	GATATC	3 cut(s)	689, 1351, 1426
EcoT14I	CCWWGG	4 cut(s)	123, 882, 955, 1161
EcoT22I	ATGCAT	1 cut(s)	350
EcoT38I	GRGCYC	2 cut(s)	167, 564
ErhI	CCWWGG	4 cut(s)	123, 882, 955, 1161
FaeI	CATG	7 cut(s)	531, 886, 914, 959, 1177, 1334, 1533
FaqI	GGGAC	2 cut(s)	1103, 1250
FatI	CATG	7 cut(s)	527, 882, 910, 955, 1173, 1330, 1529
FauI	CCCGC	1 cut(s)	172
FauNDI	CATATG	2 cut(s)	344, 1703
FbaI	TGATCA	1 cut(s)	109
FblI	GTMKAC	1 cut(s)	1752
FokI	GGATG	4 cut(s)	973, 1190, 1286, 1373
FriOI	GRGCYC	2 cut(s)	167, 564
FspBI	CTAG	3 cut(s)	485, 542, 951
GlaI	GCGC	2 cut(s)	325, 507
GsaI	CCCAGC	1 cut(s)	1584
HaeII	RGCGCY	1 cut(s)	327
HaeIII	GGCC	3 cut(s)	122, 278, 1575
HapII	CCGG	4 cut(s)	255, 318, 738, 1271
HhaI	GCGC	2 cut(s)	326, 508
Hin1II	CATG	7 cut(s)	531, 886, 914, 959, 1177, 1334, 1533
Hin6I	GCGC	2 cut(s)	324, 506
HinP1I	GCGC	2 cut(s)	324, 506
HincII	GTYRAC	3 cut(s)	132, 523, 1471
HindII	GTYRAC	3 cut(s)	132, 523, 1471
HinfI	GANTC	9 cut(s)	11, 70, 89, 258, 388, 576, 776, 808, 1313
HpaI	GTTAAC	1 cut(s)	1471
HpaII	CCGG	4 cut(s)	255, 318, 738, 1271
HphI	GGTGA	3 cut(s)	89, 733, 814
Hpy166II	GTNNAC	7 cut(s)	97, 132, 523, 1214, 1471, 1527, 1753
Hpy188I	TCNGA	9 cut(s)	69, 75, 176, 200, 1053, 1096, 1259, 1446, 1638
Hpy8I	GTNNAC	7 cut(s)	97, 132, 523, 1214, 1471, 1527, 1753
Hpy99I	CGWCG	2 cut(s)	200, 613
HpyAV	CCTTC	1 cut(s)	350
HpyCH4III	ACNGT	8 cut(s)	136, 205, 238, 470, 592, 751, 988, 1188
HpyCH4IV	ACGT	1 cut(s)	1749
HpyF3I	CTNAG	4 cut(s)	1113, 1256, 1368, 1481
HpySE526I	ACGT	1 cut(s)	1749
Hsp92II	CATG	7 cut(s)	531, 886, 914, 959, 1177, 1334, 1533
HspAI	GCGC	2 cut(s)	324, 506
Ksp22I	TGATCA	1 cut(s)	109
KspAI	GTTAAC	1 cut(s)	1471
Kzo9I	GATC	4 cut(s)	109, 919, 1363, 1657
LmnI	GCTCC	4 cut(s)	176, 461, 567, 992
Lsp1109I	GCAGC	8 cut(s)	34, 37, 40, 545, 829, 958, 1051, 1141
LweI	GCATC	4 cut(s)	438, 951, 1301, 1657
MaeI	CTAG	3 cut(s)	485, 542, 951
MaeII	ACGT	1 cut(s)	1749
MaeIII	GTNAC	2 cut(s)	553, 997
MalI	GATC	4 cut(s)	111, 921, 1365, 1659
MbiI	CCGCTC	1 cut(s)	179
MboI	GATC	4 cut(s)	109, 919, 1363, 1657
MboII	GAAGA	8 cut(s)	745, 809, 817, 1025, 1162, 1377, 1499, 1580
MfeI	CAATTG	1 cut(s)	116
MflI	RGATCY	1 cut(s)	919
MhlI	GDGCHC	3 cut(s)	167, 564, 1689
MlsI	TGGCCA	1 cut(s)	122
MluCI	AATT	4 cut(s)	116, 1047, 1303, 1503
MluNI	TGGCCA	1 cut(s)	122
MmeI	TCCRAC	2 cut(s)	178, 970
Mox20I	TGGCCA	1 cut(s)	122
Mph1103I	ATGCAT	1 cut(s)	350
MscI	TGGCCA	1 cut(s)	122
MseI	TTAA	3 cut(s)	669, 1101, 1470
Msp20I	TGGCCA	1 cut(s)	122
MspI	CCGG	4 cut(s)	255, 318, 738, 1271
MspR9I	CCNGG	1 cut(s)	739
MunI	CAATTG	1 cut(s)	116
Mva1269I	GAATGC	3 cut(s)	217, 1166, 1223
MvnI	CGCG	1 cut(s)	1045
NciI	CCSGG	1 cut(s)	739
NcoI	CCATGG	2 cut(s)	882, 955
NdeI	CATATG	2 cut(s)	344, 1703
NdeII	GATC	4 cut(s)	109, 919, 1363, 1657
NheI	GCTAGC	1 cut(s)	950
NlaIII	CATG	7 cut(s)	531, 886, 914, 959, 1177, 1334, 1533
NlaIV	GGNNCC	4 cut(s)	563, 921, 1119, 1281
NmeAIII	GCCGAG	1 cut(s)	316
NmuCI	GTSAC	1 cut(s)	553
NsiI	ATGCAT	1 cut(s)	350
NspI	RCATGY	1 cut(s)	1533
PaeR7I	CTCGAG	1 cut(s)	1065
PciI	ACATGT	1 cut(s)	1529
PctI	GAATGC	3 cut(s)	217, 1166, 1223
PfeI	GAWTC	9 cut(s)	11, 70, 89, 258, 388, 576, 776, 808, 1313
PpuMI	RGGWCCY	1 cut(s)	1117
PscI	ACATGT	1 cut(s)	1529
PshBI	ATTAAT	1 cut(s)	1101
Psp5II	RGGWCCY	1 cut(s)	1117
PspFI	CCCAGC	1 cut(s)	1580
PspN4I	GGNNCC	4 cut(s)	563, 921, 1119, 1281
PspPI	GGNCC	4 cut(s)	224, 1117, 1515, 1573
PspPPI	RGGWCCY	1 cut(s)	1117
PstI	CTGCAG	1 cut(s)	1302
PsuI	RGATCY	1 cut(s)	919
RsaI	GTAC	6 cut(s)	589, 655, 707, 1132, 1213, 1248
RsaNI	GTAC	6 cut(s)	588, 654, 706, 1131, 1212, 1247
SaqAI	TTAA	3 cut(s)	669, 1101, 1470
Sau3AI	GATC	4 cut(s)	109, 919, 1363, 1657
Sau96I	GGNCC	4 cut(s)	224, 1117, 1515, 1573
ScrFI	CCNGG	1 cut(s)	739
SduI	GDGCHC	3 cut(s)	167, 564, 1689
SfaNI	GCATC	4 cut(s)	438, 951, 1301, 1657
SfcI	CTRYAG	1 cut(s)	1298
Sfr274I	CTCGAG	1 cut(s)	1065
SinI	GGWCC	3 cut(s)	224, 1117, 1515
SlaI	CTCGAG	1 cut(s)	1065
SmlI	CTYRAG	2 cut(s)	1065, 1344
SmoI	CTYRAG	2 cut(s)	1065, 1344
Sse9I	AATT	4 cut(s)	116, 1047, 1303, 1503
SsiI	CCGC	8 cut(s)	100, 179, 264, 267, 1037, 1043, 1082, 1327
SspMI	CTAG	3 cut(s)	485, 542, 951
StyD4I	CCNGG	1 cut(s)	737
StyI	CCWWGG	4 cut(s)	123, 882, 955, 1161
TaaI	ACNGT	8 cut(s)	136, 205, 238, 470, 592, 751, 988, 1188
TaiI	ACGT	1 cut(s)	1752
TaqI	TCGA	4 cut(s)	87, 393, 1013, 1066
TasI	AATT	4 cut(s)	116, 1047, 1303, 1503
TatI	WGTACW	3 cut(s)	587, 1130, 1246
TauI	GCSGC	4 cut(s)	266, 269, 1045, 1330
TfiI	GAWTC	9 cut(s)	11, 70, 89, 258, 388, 576, 776, 808, 1313
Tru1I	TTAA	3 cut(s)	669, 1101, 1470
Tru9I	TTAA	3 cut(s)	669, 1101, 1470
TscAI	CASTG	6 cut(s)	241, 597, 796, 834, 1323, 1360
TseFI	GTSAC	1 cut(s)	553
TseI	GCWGC	8 cut(s)	47, 50, 53, 533, 842, 971, 1039, 1154
Tsp45I	GTSAC	1 cut(s)	553
TspDTI	ATGAA	2 cut(s)	1162, 1690
TspGWI	ACGGA	1 cut(s)	82
TspRI	CASTG	6 cut(s)	241, 597, 796, 834, 1323, 1360
VpaK11BI	GGWCC	3 cut(s)	224, 1117, 1515
VspI	ATTAAT	1 cut(s)	1101
XapI	RAATTY	2 cut(s)	1047, 1303
XceI	RCATGY	1 cut(s)	1533
XhoI	CTCGAG	1 cut(s)	1065
XmiI	GTMKAC	1 cut(s)	1752
XspI	CTAG	3 cut(s)	485, 542, 951
Zsp2I	ATGCAT	1 cut(s)	350

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.