Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0005602

Physical Location & Seq

Genomic Coordinates Reverse (-)

44630358 .. 44640381

Gene Structure 10024 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG363600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1773 bp

ATGGGGTTTGATTCGCAGTCGCCAGATGGTGCAAAACAATGGGGTGGTGGTGCTCGTAATAGTCTGATTCGGAGGAAGCAGGTCGATTCCGTTCACCGCAAGGCTCATCATCAATTGGCCAAGGAGTTGACTGTTCCCCATCTCGTTGCGATTGGTGTGGGCTCAACAATCGGAGCGGGAGTGTATATTCTCGTTGGAACAGTTGCCAGAGAGCATTCTGGACCAGCCCTCACTATTTCCTTTCTCATTGCCGGAATCGCCGCCGCCCTTTCGGCCTTTTGTTATGCCGAGCTTGCAAGTCGTTGCCCCTCCGCCGGAAGCGCCTATCACTACACCTACATATGCATTGGAGAAGGTGTTGCTTGGTTGGTTGGTTGGGCTTTGATTCTTGAATATACCATTGGCGGTTCGGCTGTTGCTCGTGGCATCTCCCCTAATCTGGCATTACTCTTTGGAGGAGCAGACAGTCTGCCTGTTTTTCTAGCCCGTCAATACATTCCTGCGCTTGATATTATGGTTGACCCATGCGCAGCCATTCTAGTATTTATTGTCACAGGGCTCCTGTGTGTGGGAATCAAGGAGAGTACAGTGGCACAAGGCATTGCGACGATAGCGAATGTATGTGCAATGTTATTTGTCATAGTTGCTGGTACTTATTTGGGATTTAAGACTGGCTGGTCTGGATATCAACTTCCTACTGGGTACTTCCCCTTTGGGGTGAATGGTATGCTTGCCGGGTCTGCAACTGTCTTCTTTGCTTACATTGGTTTTGATTCAGTTGCAAGCACTGCTGAAGAGGTGAAGAATCCCCAACGAGATTTACCACTGGGTATTGGTGCTGCACTATCTATATGCTGTGCATTGTATATGTTGGTTTCCATGGTCATTGTTGGTTTAGTGCCTTATCATGCAATGGATCCTGACACGCCCATCTCTACTGCATTTGCTAGCCATGGGATGCAATGGGCTGCCTATATCATTACTGTTGGAGCTGTTACTGCTCTCTGCTCGACATTGATGGGGTCTATTCTTCCGCAGCCGCGAATTCTGATGGCAATGTCTCGAGATGGATTGCTGCCGCCATTTTTCTCGGAGATTAATAAAAGCACTCAGGTCCCTGTCAAGAGTACAATAGCAACTGGGATTGGTGCTGCAACCTTGGCATTCTTTATGGATGTTTCACAGTTAGCAGGAATGGTTAGTGTGGGTACACTTGTTGCATTCACTATGGTAGCAATATCTGTACTTATACTCAGATATGTCCCACCGGATGAGGTGCCTTTGCCTGCATCTCTGCAGGATTCCATTGATTCAGTGTCCTTGCGGCATGGTAGTAGTTCTCAAGATATCAGTGGGGATGATCCTAAGGGTAGTGTTGGGTCTTCCAAAGATAGTTCTAAACCTCTACTTGACAAAGTGGATATCTTGGTTGAACTTCCTCTGATTGAAAAGCAACTACCCCTTGTTAACTACACACTAAGTGAAGATAACAGGCGAAAAATTGCTGGCTGGACCATAATGTTCACATGTGTAGGGGTGTTTCTCCTGACATATTCAGCTTCAAGTTTGGGCCTCCCCAGCTTTCTTCGCTATGCAGTATGTGGAGTTGGTGGTATCCTTGTTCTATTTGGTCTGATTGTGCTTACTTGTATAGATCAAGATGATGCACGGCACAGCTTTGGGCACACAGGAGGTTTCATATGCCCATTTGTTCCATTGCTTCCAATCATCTGTATTCTCATCAACGTCTACTTACTCATCAATCTTGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0008150 GO:0009705 GO:0012505 GO:0016020 GO:0031090 GO:0031967 GO:0031975 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048878 GO:0050801 GO:0055081 GO:0065007 GO:0065008 GO:0080144 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko05206 map05206

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

590

Amino Acids

62.11

Weight (kDa)

5.99

Isoelectric Point (pI)

35.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	45 - 425	1e-50	Amino acid permease
AA_permease	PF00324	47 - 417	1.6e-38	Amino acid permease
AA_permease_C	PF13906	566 - 590	3e-06	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005602)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58030 AT5G36940
fragaria_vesca	FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560
malus_domestica	MD12G1010500.v1.1 MD14G1007600.v1.1
prunus_persica	Prupe.7G012500_v2.0.a1 Prupe.7G012500_v2.0.a1 Prupe.7G012500_v2.0.a1
pyrus_communis	pycom12g00820 pycom14g00610
rosa_chinensis	RchiOBHm_Chr3g0496211
rosa_laevigata	RLG00000022551
rosa_roxburghii	Rroxscaffold_6G00389450
rosa_rugosa	Rorug03G0280500
rosa_samantha	Rh3AG327600 Rh3BG363200 Rh3BG363600 Rh3CG360600 Rh3DG363600
rosa_wichuraiana	Rw3G028690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	676
Acc16I	TGCGCA	1 cut(s)	529
Acc36I	ACCTGC	1 cut(s)	70
AccB1I	GGYRCC	1 cut(s)	1276
AccBSI	CCGCTC	1 cut(s)	176
AccI	GTMKAC	1 cut(s)	1749
AccII	CGCG	1 cut(s)	1042
AclWI	GGATC	3 cut(s)	911, 924, 1355
AcoI	YGGCCR	1 cut(s)	117
AcsI	RAATTY	1 cut(s)	1044
AcuI	CTGAAG	1 cut(s)	813
AdeI	CACNNNGTG	1 cut(s)	1481
AfaI	GTAC	6 cut(s)	586, 652, 704, 1129, 1210, 1245
AfiI	CCNNNNNNNGG	4 cut(s)	314, 439, 568, 715
AflIII	ACRYGT	1 cut(s)	1526
AgsI	TTSAA	4 cut(s)	392, 1433, 1448, 1563
AjuI	GAANNNNNNNTTGG	2 cut(s)	384, 416
AluBI	AGCT	5 cut(s)	292, 992, 1559, 1581, 1677
AluI	AGCT	5 cut(s)	292, 992, 1559, 1581, 1677
Alw21I	GWGCWC	1 cut(s)	55
Alw26I	GTCTC	1 cut(s)	1065
AlwI	GGATC	3 cut(s)	911, 924, 1355
Ama87I	CYCGRG	1 cut(s)	1062
AoxI	GGCC	3 cut(s)	117, 273, 1570
ApeKI	GCWGC	6 cut(s)	530, 839, 968, 1036, 1075, 1151
ApoI	RAATTY	1 cut(s)	1044
AseI	ATTAAT	1 cut(s)	1098
AspLEI	GCGC	3 cut(s)	323, 505, 530
AspS9I	GGNCC	4 cut(s)	221, 1114, 1512, 1570
AsuC2I	CCSGG	1 cut(s)	736
AsuHPI	GGTGA	3 cut(s)	86, 730, 811
AsuNHI	GCTAGC	1 cut(s)	947
AvaI	CYCGRG	1 cut(s)	1062
AvaII	GGWCC	3 cut(s)	221, 1114, 1512
AxyI	CCTNAGG	1 cut(s)	1365
BaeGI	GKGCMC	1 cut(s)	1686
BaeI	ACNNNNGTAYC	2 cut(s)	1200, 1233
BalI	TGGCCA	1 cut(s)	119
BamHI	GGATCC	1 cut(s)	916
BanI	GGYRCC	1 cut(s)	1276
BanII	GRGCYC	2 cut(s)	164, 561
BauI	CACGAG	1 cut(s)	420
BbsI	GAAGAC	2 cut(s)	742, 1374
Bbv12I	GWGCWC	1 cut(s)	55
BbvI	GCAGC	6 cut(s)	542, 826, 955, 1048, 1062, 1138
BccI	CCATC	6 cut(s)	20, 147, 938, 1012, 1045, 1061
BceAI	ACGGC	1 cut(s)	1685
BciVI	GTATCC	1 cut(s)	1625
BcnI	CCSGG	1 cut(s)	736
BcoDI	GTCTC	1 cut(s)	1065
BfaI	CTAG	3 cut(s)	482, 539, 948
BfmI	CTRYAG	1 cut(s)	1295
BfoI	RGCGCY	1 cut(s)	324
BfuAI	ACCTGC	1 cut(s)	70
BfuI	GTATCC	1 cut(s)	1625
BglI	GCCNNNNNGGC	1 cut(s)	272
Bme1390I	CCNGG	1 cut(s)	736
Bme18I	GGWCC	3 cut(s)	221, 1114, 1512
BmeT110I	CYCGRG	1 cut(s)	1062
BmgT120I	GGNCC	4 cut(s)	221, 1114, 1512, 1570
BmiI	GGNNCC	4 cut(s)	560, 918, 1116, 1278
BmrFI	CCNGG	1 cut(s)	736
BmrI	ACTGGG	3 cut(s)	708, 836, 1149
BmsI	GCATC	4 cut(s)	435, 948, 1298, 1654
BmtI	GCTAGC	1 cut(s)	951
BmuI	ACTGGG	3 cut(s)	708, 836, 1149
BpiI	GAAGAC	2 cut(s)	742, 1374
BpuEI	CTTGAG	1 cut(s)	1326
BpuMI	CCSGG	1 cut(s)	736
BsaJI	CCNNGG	4 cut(s)	120, 879, 952, 1158
BsaWI	WCCGGW	1 cut(s)	1267
BsaXI	ACNNNNNCTCC	4 cut(s)	165, 195, 342, 372
Bsc4I	CCNNNNNNNGG	4 cut(s)	314, 439, 568, 715
Bse1I	ACTGG	4 cut(s)	676, 703, 831, 1144
Bse21I	CCTNAGG	1 cut(s)	1365
Bse3DI	GCAATG	7 cut(s)	246, 600, 633, 918, 968, 1062, 1715
BseDI	CCNNGG	4 cut(s)	120, 879, 952, 1158
BseGI	GGATG	4 cut(s)	963, 1180, 1276, 1363
BseLI	CCNNNNNNNGG	4 cut(s)	314, 439, 568, 715
BseMI	GCAATG	7 cut(s)	246, 600, 633, 918, 968, 1062, 1715
BseMII	CTCAG	2 cut(s)	1124, 1267
BseNI	ACTGG	4 cut(s)	676, 703, 831, 1144
BseRI	GAGGAG	1 cut(s)	471
BseSI	GKGCMC	1 cut(s)	1686
BseXI	GCAGC	6 cut(s)	542, 826, 955, 1048, 1062, 1138
BseYI	CCCAGC	1 cut(s)	1577
BsgI	GTGCAG	1 cut(s)	825
Bsh1236I	CGCG	1 cut(s)	1042
BshFI	GGCC	3 cut(s)	119, 275, 1572
BshNI	GGYRCC	1 cut(s)	1276
BsiHKAI	GWGCWC	1 cut(s)	55
BsiHKCI	CYCGRG	1 cut(s)	1062
BsiSI	CCGG	4 cut(s)	252, 315, 735, 1268
BslFI	GGGAC	2 cut(s)	1100, 1247
BslI	CCNNNNNNNGG	4 cut(s)	314, 439, 568, 715
BsmAI	GTCTC	1 cut(s)	1065
BsmFI	GGGAC	2 cut(s)	1100, 1247
BsmI	GAATGC	3 cut(s)	214, 1163, 1220
BsnI	GGCC	3 cut(s)	119, 275, 1572
BsoBI	CYCGRG	1 cut(s)	1062
Bsp1286I	GDGCHC	4 cut(s)	55, 164, 561, 1686
Bsp143I	GATC	3 cut(s)	916, 1360, 1654
Bsp19I	CCATGG	2 cut(s)	879, 952
BspANI	GGCC	3 cut(s)	119, 275, 1572
BspCNI	CTCAG	2 cut(s)	1123, 1266
BspFNI	CGCG	1 cut(s)	1042
BspLI	GGNNCC	4 cut(s)	560, 918, 1116, 1278
BspMAI	CTGCAG	1 cut(s)	1299
BspMI	ACCTGC	1 cut(s)	70
BspOI	GCTAGC	1 cut(s)	951
BspPI	GGATC	3 cut(s)	911, 924, 1355
BspT107I	GGYRCC	1 cut(s)	1276
BsrBI	CCGCTC	1 cut(s)	176
BsrDI	GCAATG	7 cut(s)	246, 600, 633, 918, 968, 1062, 1715
BsrI	ACTGG	4 cut(s)	676, 703, 831, 1144
BssECI	CCNNGG	4 cut(s)	120, 879, 952, 1158
BssMI	GATC	3 cut(s)	916, 1360, 1654
BssSI	CACGAG	1 cut(s)	420
BssT1I	CCWWGG	4 cut(s)	120, 879, 952, 1158
Bst2BI	CACGAG	1 cut(s)	420
Bst4CI	ACNGT	7 cut(s)	133, 202, 467, 589, 748, 985, 1185
Bst6I	CTCTTC	1 cut(s)	789
BstAPI	GCANNNNNTGC	1 cut(s)	788
BstC8I	GCNNGC	6 cut(s)	294, 732, 784, 949, 1287, 1507
BstDEI	CTNAG	4 cut(s)	1110, 1253, 1365, 1478
BstDSI	CCRYGG	2 cut(s)	879, 952
BstF5I	GGATG	4 cut(s)	963, 1180, 1276, 1363
BstFNI	CGCG	1 cut(s)	1042
BstH2I	RGCGCY	1 cut(s)	324
BstHHI	GCGC	3 cut(s)	323, 505, 530
BstKTI	GATC	3 cut(s)	919, 1363, 1657
BstMAI	GTCTC	1 cut(s)	1065
BstMBI	GATC	3 cut(s)	916, 1360, 1654
BstNSI	RCATGY	1 cut(s)	1530
BstSCI	CCNGG	1 cut(s)	734
BstSFI	CTRYAG	1 cut(s)	1295
BstSLI	GKGCMC	1 cut(s)	1686
BstUI	CGCG	1 cut(s)	1042
BstV1I	GCAGC	6 cut(s)	542, 826, 955, 1048, 1062, 1138
BstV2I	GAAGAC	2 cut(s)	742, 1374
BstX2I	RGATCY	1 cut(s)	916
BstYI	RGATCY	1 cut(s)	916
Bsu36I	CCTNAGG	1 cut(s)	1365
BsuI	GTATCC	1 cut(s)	1625
BsuRI	GGCC	3 cut(s)	119, 275, 1572
BtgI	CCRYGG	2 cut(s)	879, 952
BtsCI	GGATG	4 cut(s)	963, 1180, 1276, 1363
BtsI	GCAGTG	1 cut(s)	786
BtsIMutI	CAGTG	5 cut(s)	594, 786, 824, 1320, 1357
BveI	ACCTGC	1 cut(s)	70
Cac8I	GCNNGC	6 cut(s)	294, 732, 784, 949, 1287, 1507
CfoI	GCGC	3 cut(s)	323, 505, 530
Cfr13I	GGNCC	4 cut(s)	221, 1114, 1512, 1570
Csp6I	GTAC	6 cut(s)	585, 651, 703, 1128, 1209, 1244
CviAII	CATG	6 cut(s)	525, 880, 908, 953, 1328, 1527
CviQI	GTAC	6 cut(s)	585, 651, 703, 1128, 1209, 1244
DdeI	CTNAG	4 cut(s)	1110, 1253, 1365, 1478
DpnI	GATC	3 cut(s)	918, 1362, 1656
DpnII	GATC	3 cut(s)	916, 1360, 1654
DraIII	CACNNNGTG	1 cut(s)	1481
DrdI	GACNNNNNNGTC	1 cut(s)	676
DseDI	GACNNNNNNGTC	1 cut(s)	676
EaeI	YGGCCR	1 cut(s)	117
Eam1104I	CTCTTC	1 cut(s)	789
EarI	CTCTTC	1 cut(s)	789
EciI	GGCGGA	1 cut(s)	301
Eco130I	CCWWGG	4 cut(s)	120, 879, 952, 1158
Eco24I	GRGCYC	2 cut(s)	164, 561
Eco32I	GATATC	3 cut(s)	686, 1348, 1423
Eco47I	GGWCC	3 cut(s)	221, 1114, 1512
Eco57I	CTGAAG	1 cut(s)	813
Eco81I	CCTNAGG	1 cut(s)	1365
Eco88I	CYCGRG	1 cut(s)	1062
EcoO109I	RGGNCCY	1 cut(s)	1114
EcoRI	GAATTC	1 cut(s)	1044
EcoRV	GATATC	3 cut(s)	686, 1348, 1423
EcoT14I	CCWWGG	4 cut(s)	120, 879, 952, 1158
EcoT22I	ATGCAT	1 cut(s)	347
EcoT38I	GRGCYC	2 cut(s)	164, 561
ErhI	CCWWGG	4 cut(s)	120, 879, 952, 1158
FaeI	CATG	6 cut(s)	528, 883, 911, 956, 1331, 1530
FaqI	GGGAC	2 cut(s)	1100, 1247
FatI	CATG	6 cut(s)	524, 879, 907, 952, 1327, 1526
FauI	CCCGC	1 cut(s)	169
FauNDI	CATATG	2 cut(s)	341, 1700
FblI	GTMKAC	1 cut(s)	1749
FokI	GGATG	4 cut(s)	970, 1187, 1283, 1370
FriOI	GRGCYC	2 cut(s)	164, 561
FspBI	CTAG	3 cut(s)	482, 539, 948
FspI	TGCGCA	1 cut(s)	529
GlaI	GCGC	3 cut(s)	322, 504, 529
GsaI	CCCAGC	1 cut(s)	1581
HaeII	RGCGCY	1 cut(s)	324
HaeIII	GGCC	3 cut(s)	119, 275, 1572
HapII	CCGG	4 cut(s)	252, 315, 735, 1268
HhaI	GCGC	3 cut(s)	323, 505, 530
Hin1II	CATG	6 cut(s)	528, 883, 911, 956, 1331, 1530
Hin6I	GCGC	3 cut(s)	321, 503, 528
HinP1I	GCGC	3 cut(s)	321, 503, 528
HincII	GTYRAC	3 cut(s)	129, 520, 1468
HindII	GTYRAC	3 cut(s)	129, 520, 1468
HpaI	GTTAAC	1 cut(s)	1468
HpaII	CCGG	4 cut(s)	252, 315, 735, 1268
HphI	GGTGA	3 cut(s)	86, 730, 811
Hpy166II	GTNNAC	7 cut(s)	94, 129, 520, 1211, 1468, 1524, 1750
Hpy188I	TCNGA	8 cut(s)	66, 72, 173, 1050, 1093, 1256, 1443, 1635
Hpy8I	GTNNAC	7 cut(s)	94, 129, 520, 1211, 1468, 1524, 1750
Hpy99I	CGWCG	1 cut(s)	610
HpyAV	CCTTC	1 cut(s)	347
HpyCH4III	ACNGT	7 cut(s)	133, 202, 467, 589, 748, 985, 1185
HpyCH4IV	ACGT	1 cut(s)	1746
HpyF3I	CTNAG	4 cut(s)	1110, 1253, 1365, 1478
HpySE526I	ACGT	1 cut(s)	1746
Hsp92II	CATG	6 cut(s)	528, 883, 911, 956, 1331, 1530
HspAI	GCGC	3 cut(s)	321, 503, 528
KspAI	GTTAAC	1 cut(s)	1468
Kzo9I	GATC	3 cut(s)	916, 1360, 1654
LmnI	GCTCC	4 cut(s)	173, 458, 564, 989
Lsp1109I	GCAGC	6 cut(s)	542, 826, 955, 1048, 1062, 1138
LweI	GCATC	4 cut(s)	435, 948, 1298, 1654
MaeI	CTAG	3 cut(s)	482, 539, 948
MaeII	ACGT	1 cut(s)	1746
MaeIII	GTNAC	2 cut(s)	550, 994
MalI	GATC	3 cut(s)	918, 1362, 1656
MbiI	CCGCTC	1 cut(s)	176
MboI	GATC	3 cut(s)	916, 1360, 1654
MboII	GAAGA	7 cut(s)	742, 806, 814, 1022, 1374, 1496, 1577
MfeI	CAATTG	1 cut(s)	113
MflI	RGATCY	1 cut(s)	916
MhlI	GDGCHC	4 cut(s)	55, 164, 561, 1686
MlsI	TGGCCA	1 cut(s)	119
MluCI	AATT	3 cut(s)	113, 1044, 1500
MluNI	TGGCCA	1 cut(s)	119
MmeI	TCCRAC	2 cut(s)	175, 967
Mox20I	TGGCCA	1 cut(s)	119
Mph1103I	ATGCAT	1 cut(s)	347
MscI	TGGCCA	1 cut(s)	119
MseI	TTAA	3 cut(s)	666, 1098, 1467
Msp20I	TGGCCA	1 cut(s)	119
MspI	CCGG	4 cut(s)	252, 315, 735, 1268
MspR9I	CCNGG	1 cut(s)	736
MunI	CAATTG	1 cut(s)	113
Mva1269I	GAATGC	3 cut(s)	214, 1163, 1220
MvnI	CGCG	1 cut(s)	1042
NciI	CCSGG	1 cut(s)	736
NcoI	CCATGG	2 cut(s)	879, 952
NdeI	CATATG	2 cut(s)	341, 1700
NdeII	GATC	3 cut(s)	916, 1360, 1654
NheI	GCTAGC	1 cut(s)	947
NlaIII	CATG	6 cut(s)	528, 883, 911, 956, 1331, 1530
NlaIV	GGNNCC	4 cut(s)	560, 918, 1116, 1278
NmeAIII	GCCGAG	1 cut(s)	313
NmuCI	GTSAC	1 cut(s)	550
NsbI	TGCGCA	1 cut(s)	529
NsiI	ATGCAT	1 cut(s)	347
NspI	RCATGY	1 cut(s)	1530
PaeR7I	CTCGAG	1 cut(s)	1062
PciI	ACATGT	1 cut(s)	1526
PctI	GAATGC	3 cut(s)	214, 1163, 1220
PpuMI	RGGWCCY	1 cut(s)	1114
PscI	ACATGT	1 cut(s)	1526
PshBI	ATTAAT	1 cut(s)	1098
Psp5II	RGGWCCY	1 cut(s)	1114
PspFI	CCCAGC	1 cut(s)	1577
PspN4I	GGNNCC	4 cut(s)	560, 918, 1116, 1278
PspPI	GGNCC	4 cut(s)	221, 1114, 1512, 1570
PspPPI	RGGWCCY	1 cut(s)	1114
PstI	CTGCAG	1 cut(s)	1299
PsuI	RGATCY	1 cut(s)	916
RsaI	GTAC	6 cut(s)	586, 652, 704, 1129, 1210, 1245
RsaNI	GTAC	6 cut(s)	585, 651, 703, 1128, 1209, 1244
SaqAI	TTAA	3 cut(s)	666, 1098, 1467
Sau3AI	GATC	3 cut(s)	916, 1360, 1654
Sau96I	GGNCC	4 cut(s)	221, 1114, 1512, 1570
ScrFI	CCNGG	1 cut(s)	736
SduI	GDGCHC	4 cut(s)	55, 164, 561, 1686
SfaNI	GCATC	4 cut(s)	435, 948, 1298, 1654
SfcI	CTRYAG	1 cut(s)	1295
Sfr274I	CTCGAG	1 cut(s)	1062
SinI	GGWCC	3 cut(s)	221, 1114, 1512
SlaI	CTCGAG	1 cut(s)	1062
SmlI	CTYRAG	2 cut(s)	1062, 1341
SmoI	CTYRAG	2 cut(s)	1062, 1341
Sse9I	AATT	3 cut(s)	113, 1044, 1500
SspMI	CTAG	3 cut(s)	482, 539, 948
StyD4I	CCNGG	1 cut(s)	734
StyI	CCWWGG	4 cut(s)	120, 879, 952, 1158
TaaI	ACNGT	7 cut(s)	133, 202, 467, 589, 748, 985, 1185
TaiI	ACGT	1 cut(s)	1749
TaqI	TCGA	3 cut(s)	84, 1010, 1063
TasI	AATT	3 cut(s)	113, 1044, 1500
TatI	WGTACW	3 cut(s)	584, 1127, 1243
TauI	GCSGC	5 cut(s)	263, 266, 1042, 1081, 1327
Tru1I	TTAA	3 cut(s)	666, 1098, 1467
Tru9I	TTAA	3 cut(s)	666, 1098, 1467
TscAI	CASTG	5 cut(s)	594, 793, 831, 1320, 1357
TseFI	GTSAC	1 cut(s)	550
TseI	GCWGC	6 cut(s)	530, 839, 968, 1036, 1075, 1151
Tsp45I	GTSAC	1 cut(s)	550
TspDTI	ATGAA	1 cut(s)	1687
TspGWI	ACGGA	1 cut(s)	79
TspRI	CASTG	5 cut(s)	594, 793, 831, 1320, 1357
VpaK11BI	GGWCC	3 cut(s)	221, 1114, 1512
VspI	ATTAAT	1 cut(s)	1098
XapI	RAATTY	1 cut(s)	1044
XceI	RCATGY	1 cut(s)	1530
XhoI	CTCGAG	1 cut(s)	1062
XmiI	GTMKAC	1 cut(s)	1749
XspI	CTAG	3 cut(s)	482, 539, 948
Zsp2I	ATGCAT	1 cut(s)	347

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.