Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0005602

Physical Location & Seq

Genomic Coordinates Reverse (-)

46515000 .. 46525188

Gene Structure 10189 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG327600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGGGGTTTGATTCGCAGTCGCCAGATGGTGCAAAACAATGGGGTGCTGCTGCTGCTGCTGGTGGTGCTCGTAATAGTCTGATTCGGAGGAAGCAGGTCGATTCCGTTCACCGCAAGGCTCATCATCAATTGGCCAGGGAGTTGACTGTTCCCCATCTCGTTGCAATTGGTGTGGGCTCAACAATCGGAGCGGGAGTGTATATTCTTGTTGGAACAGTTGCCAGAGAGCATTCTGGACCGGCCCTCACTATTTCCTTTCTCATTGCTGGAATCGCCGCCGCGCTTTCGGCCTTTTGTTATGCCGAGCTTGCAAGTCGTTGCCCCTCCGCCGGAAGCGCCTATCACTACACCTACATATGCATTGGAGAAGGTGTTGCTTGGTTGGTTGGTTGGGCTTTGATTCTCGAATATACCATTGGCGGTTCGGCTGTTGCTCGTGGCATCTCCCCTAATCTGGCATTACTCTTTGGAGGAGCAGACAGTCTGCCTGTTTTTCTAGCCCGTCAATACATTCCTGCGCTTGATATTATGGTTGACCCGTGCGCAGCCATTCTAGTATTTATTGTCACAGGGCTCCTGTGTGTGGGAATCAAGGAGAGTACAGTGGCACAAGGCATTGCGACGATAGCGAATGTATGTGCAATGTTATTTGTCATAGTTGCTGGTACTTATTTGGGATTTAAGACCGGCTGGTCTGGTTATCAACTTCCTACTGGGTACTTCCCCTTTGGGGTGAATGGTATGCTTGCCGGGTCTGCAACTGTCTTCTTTGCTTACATTGGTTTTGATTCAGTTGCAAGCACTGCTGAAGAGGTGAAGAATCCCCAACGAGATTTACCACTGGGTATTGGTGCTGCACTATCTATATGCTGTGCATTGTATATGTTGGTTTCCATGGTCATTGTTGGTTTAGTGCCTTATCATGCAATGGATCCTGACACGCCCATCTCTACTGCATTTGCTAGCCATGGGATGCAATGGGCTGCCTATATCATTACTGTTGGTGCTGTTACTGCTCTCTGCTCGACGTTGATGGGGTCTATTCTTCCGCAGCCGCGAATTCTGATGGCAATGGCTAGAGATGGATTGCTGCCGCCATTTTTCTCGGAGATTAATAAAAGCACTCAGGTTCCTGTCAAGAGTACAATAGCAACTGGGATTGGTGCTGCAATCTTGGCATTCTTCATGGATGTTTCACAGTTAGCAGGAATGGTTAGTGTGGGTACACTTGTTGCATTCACTATGGTAGCAATATCTGTACTTATACTCAGATATGTCCCACCGGATGAGGTGCCTTTGCCTGCATCTCTGCAGGGTTCCATTGATTCAGTCTCCTTGCGGCATGGTAGTAATTCTCAAGATATCAGTGGGGATGATCCTAAGGGTAGTGTTGGGTCTTCCAAAGATAGTTCTAAACCTCTACTTGACAAAGTGGATATCTTGGTTGAACTTCCTCTGATTGAAAAGCAACTACCCCTTGTTAACTACACACTAAGTGAAGATAACAGGCGAAAAATTGCTGGCTGGACCATAATGTTCACATGTGTAGGGGTGTTTCTCCTGACATATTCAGCTTCAAGTTTGGGCCTCCCCAGCTTTCTTCGCTATGCAGTATGTGGAGCTGGTGGTATCCTTGTTCTATTTGGTCTGATTGTGCTTACTTGTATAGATCAAGATGATGCACGGCACAGCTTTGGGCACACAGGAGGTTTCATATGCCCATTTGTTCCATTGCTTCCAATCATCTGTATTCTCATCAACGTCTACTTACTCATCAATCTTGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0008150 GO:0009705 GO:0012505 GO:0016020 GO:0031090 GO:0031967 GO:0031975 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048878 GO:0050801 GO:0055081 GO:0065007 GO:0065008 GO:0080144 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko05206 map05206

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

595

Amino Acids

62.43

Weight (kDa)

6.11

Isoelectric Point (pI)

32.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	50 - 430	3e-51	Amino acid permease
AA_permease	PF00324	52 - 422	5.7e-39	Amino acid permease
AA_permease_C	PF13906	571 - 595	3e-06	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005602)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58030 AT5G36940
fragaria_vesca	FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560
malus_domestica	MD12G1010500.v1.1 MD14G1007600.v1.1
prunus_persica	Prupe.7G012500_v2.0.a1 Prupe.7G012500_v2.0.a1 Prupe.7G012500_v2.0.a1
pyrus_communis	pycom12g00820 pycom14g00610
rosa_chinensis	RchiOBHm_Chr3g0496211
rosa_laevigata	RLG00000022551
rosa_roxburghii	Rroxscaffold_6G00389450
rosa_rugosa	Rorug03G0280500
rosa_samantha	Rh3AG327600 Rh3BG363200 Rh3BG363600 Rh3CG360600 Rh3DG363600
rosa_wichuraiana	Rw3G028690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	691
Acc16I	TGCGCA	1 cut(s)	544
Acc36I	ACCTGC	1 cut(s)	85
AccB1I	GGYRCC	1 cut(s)	1291
AccBSI	CCGCTC	1 cut(s)	191
AccI	GTMKAC	1 cut(s)	1764
AccII	CGCG	2 cut(s)	281, 1057
AclWI	GGATC	3 cut(s)	926, 939, 1370
AcoI	YGGCCR	1 cut(s)	132
AcsI	RAATTY	1 cut(s)	1059
AcuI	CTGAAG	1 cut(s)	828
AdeI	CACNNNGTG	1 cut(s)	1496
AfaI	GTAC	6 cut(s)	601, 667, 719, 1144, 1225, 1260
AfiI	CCNNNNNNNGG	4 cut(s)	329, 454, 583, 730
AflIII	ACRYGT	1 cut(s)	1541
AgsI	TTSAA	3 cut(s)	1448, 1463, 1578
AjnI	CCWGG	1 cut(s)	134
AjuI	GAANNNNNNNTTGG	2 cut(s)	399, 431
AluBI	AGCT	5 cut(s)	307, 1574, 1596, 1622, 1692
AluI	AGCT	5 cut(s)	307, 1574, 1596, 1622, 1692
Alw21I	GWGCWC	1 cut(s)	70
Alw26I	GTCTC	1 cut(s)	1336
AlwI	GGATC	3 cut(s)	926, 939, 1370
AoxI	GGCC	4 cut(s)	132, 240, 288, 1585
ApoI	RAATTY	1 cut(s)	1059
AseI	ATTAAT	1 cut(s)	1113
AspLEI	GCGC	4 cut(s)	283, 338, 520, 545
AspS9I	GGNCC	4 cut(s)	236, 241, 1527, 1585
AsuC2I	CCSGG	1 cut(s)	751
AsuHPI	GGTGA	3 cut(s)	101, 745, 826
AsuNHI	GCTAGC	1 cut(s)	962
AvaII	GGWCC	2 cut(s)	236, 1527
AxyI	CCTNAGG	1 cut(s)	1380
BaeGI	GKGCMC	1 cut(s)	1701
BaeI	ACNNNNGTAYC	2 cut(s)	1215, 1248
BalI	TGGCCA	1 cut(s)	134
BamHI	GGATCC	1 cut(s)	931
BanI	GGYRCC	1 cut(s)	1291
BanII	GRGCYC	2 cut(s)	179, 576
BauI	CACGAG	1 cut(s)	435
BbsI	GAAGAC	2 cut(s)	757, 1389
Bbv12I	GWGCWC	1 cut(s)	70
BccI	CCATC	6 cut(s)	20, 162, 953, 1027, 1060, 1076
BceAI	ACGGC	1 cut(s)	1700
BciT130I	CCWGG	1 cut(s)	136
BciVI	GTATCC	1 cut(s)	1640
BcnI	CCSGG	1 cut(s)	751
BcoDI	GTCTC	1 cut(s)	1336
BfaI	CTAG	4 cut(s)	497, 554, 963, 1077
BfmI	CTRYAG	1 cut(s)	1310
BfoI	RGCGCY	1 cut(s)	339
BfuAI	ACCTGC	1 cut(s)	85
BfuI	GTATCC	1 cut(s)	1640
Bme1390I	CCNGG	2 cut(s)	136, 751
Bme18I	GGWCC	2 cut(s)	236, 1527
BmgT120I	GGNCC	4 cut(s)	236, 241, 1527, 1585
BmiI	GGNNCC	5 cut(s)	575, 933, 1131, 1293, 1318
BmrFI	CCNGG	2 cut(s)	136, 751
BmrI	ACTGGG	3 cut(s)	723, 851, 1164
BmsI	GCATC	4 cut(s)	450, 963, 1313, 1669
BmtI	GCTAGC	1 cut(s)	966
BmuI	ACTGGG	3 cut(s)	723, 851, 1164
BpiI	GAAGAC	2 cut(s)	757, 1389
BpuEI	CTTGAG	1 cut(s)	1341
BpuMI	CCSGG	1 cut(s)	751
BsaJI	CCNNGG	3 cut(s)	135, 894, 967
BsaWI	WCCGGW	1 cut(s)	1282
BsaXI	ACNNNNNCTCC	4 cut(s)	180, 210, 357, 387
Bsc4I	CCNNNNNNNGG	4 cut(s)	329, 454, 583, 730
Bse118I	RCCGGY	2 cut(s)	238, 686
Bse1I	ACTGG	3 cut(s)	718, 846, 1159
Bse21I	CCTNAGG	1 cut(s)	1380
Bse3DI	GCAATG	7 cut(s)	261, 615, 648, 933, 983, 1077, 1730
BseBI	CCWGG	1 cut(s)	136
BseDI	CCNNGG	3 cut(s)	135, 894, 967
BseGI	GGATG	4 cut(s)	978, 1195, 1291, 1378
BseLI	CCNNNNNNNGG	4 cut(s)	329, 454, 583, 730
BseMI	GCAATG	7 cut(s)	261, 615, 648, 933, 983, 1077, 1730
BseMII	CTCAG	2 cut(s)	1139, 1282
BseNI	ACTGG	3 cut(s)	718, 846, 1159
BseRI	GAGGAG	1 cut(s)	486
BseSI	GKGCMC	1 cut(s)	1701
BseYI	CCCAGC	1 cut(s)	1592
BsgI	GTGCAG	1 cut(s)	840
Bsh1236I	CGCG	2 cut(s)	281, 1057
BshFI	GGCC	4 cut(s)	134, 242, 290, 1587
BshNI	GGYRCC	1 cut(s)	1291
BsiHKAI	GWGCWC	1 cut(s)	70
BsiSI	CCGG	5 cut(s)	239, 330, 687, 750, 1283
BslFI	GGGAC	1 cut(s)	1262
BslI	CCNNNNNNNGG	4 cut(s)	329, 454, 583, 730
BsmAI	GTCTC	1 cut(s)	1336
BsmFI	GGGAC	1 cut(s)	1262
BsmI	GAATGC	3 cut(s)	229, 1178, 1235
BsnI	GGCC	4 cut(s)	134, 242, 290, 1587
Bsp1286I	GDGCHC	4 cut(s)	70, 179, 576, 1701
Bsp143I	GATC	3 cut(s)	931, 1375, 1669
Bsp19I	CCATGG	2 cut(s)	894, 967
BspANI	GGCC	4 cut(s)	134, 242, 290, 1587
BspCNI	CTCAG	2 cut(s)	1138, 1281
BspFNI	CGCG	2 cut(s)	281, 1057
BspLI	GGNNCC	5 cut(s)	575, 933, 1131, 1293, 1318
BspMAI	CTGCAG	1 cut(s)	1314
BspMI	ACCTGC	1 cut(s)	85
BspOI	GCTAGC	1 cut(s)	966
BspPI	GGATC	3 cut(s)	926, 939, 1370
BspT107I	GGYRCC	1 cut(s)	1291
BsrBI	CCGCTC	1 cut(s)	191
BsrDI	GCAATG	7 cut(s)	261, 615, 648, 933, 983, 1077, 1730
BsrFI	RCCGGY	2 cut(s)	238, 686
BsrI	ACTGG	3 cut(s)	718, 846, 1159
BssAI	RCCGGY	2 cut(s)	238, 686
BssECI	CCNNGG	3 cut(s)	135, 894, 967
BssMI	GATC	3 cut(s)	931, 1375, 1669
BssSI	CACGAG	1 cut(s)	435
BssT1I	CCWWGG	2 cut(s)	894, 967
Bst2BI	CACGAG	1 cut(s)	435
Bst2UI	CCWGG	1 cut(s)	136
Bst4CI	ACNGT	7 cut(s)	148, 217, 482, 604, 763, 1000, 1200
Bst6I	CTCTTC	1 cut(s)	804
BstAPI	GCANNNNNTGC	1 cut(s)	803
BstC8I	GCNNGC	6 cut(s)	309, 747, 799, 964, 1302, 1522
BstDEI	CTNAG	4 cut(s)	1125, 1268, 1380, 1493
BstDSI	CCRYGG	2 cut(s)	894, 967
BstF5I	GGATG	4 cut(s)	978, 1195, 1291, 1378
BstFNI	CGCG	2 cut(s)	281, 1057
BstH2I	RGCGCY	1 cut(s)	339
BstHHI	GCGC	4 cut(s)	283, 338, 520, 545
BstKTI	GATC	3 cut(s)	934, 1378, 1672
BstMAI	GTCTC	1 cut(s)	1336
BstMBI	GATC	3 cut(s)	931, 1375, 1669
BstNI	CCWGG	1 cut(s)	136
BstNSI	RCATGY	1 cut(s)	1545
BstSCI	CCNGG	2 cut(s)	134, 749
BstSFI	CTRYAG	1 cut(s)	1310
BstSLI	GKGCMC	1 cut(s)	1701
BstUI	CGCG	2 cut(s)	281, 1057
BstV2I	GAAGAC	2 cut(s)	757, 1389
BstX2I	RGATCY	1 cut(s)	931
BstYI	RGATCY	1 cut(s)	931
Bsu36I	CCTNAGG	1 cut(s)	1380
BsuI	GTATCC	1 cut(s)	1640
BsuRI	GGCC	4 cut(s)	134, 242, 290, 1587
BtgI	CCRYGG	2 cut(s)	894, 967
BtsCI	GGATG	4 cut(s)	978, 1195, 1291, 1378
BtsI	GCAGTG	1 cut(s)	801
BtsIMutI	CAGTG	4 cut(s)	609, 801, 839, 1372
BveI	ACCTGC	1 cut(s)	85
Cac8I	GCNNGC	6 cut(s)	309, 747, 799, 964, 1302, 1522
CfoI	GCGC	4 cut(s)	283, 338, 520, 545
Cfr10I	RCCGGY	2 cut(s)	238, 686
Cfr13I	GGNCC	4 cut(s)	236, 241, 1527, 1585
Csp6I	GTAC	6 cut(s)	600, 666, 718, 1143, 1224, 1259
CspCI	CAANNNNNGTGG	2 cut(s)	153, 188
CviAII	CATG	6 cut(s)	895, 923, 968, 1186, 1343, 1542
CviQI	GTAC	6 cut(s)	600, 666, 718, 1143, 1224, 1259
DdeI	CTNAG	4 cut(s)	1125, 1268, 1380, 1493
DpnI	GATC	3 cut(s)	933, 1377, 1671
DpnII	GATC	3 cut(s)	931, 1375, 1669
DraIII	CACNNNGTG	1 cut(s)	1496
DrdI	GACNNNNNNGTC	1 cut(s)	691
DseDI	GACNNNNNNGTC	1 cut(s)	691
EaeI	YGGCCR	1 cut(s)	132
Eam1104I	CTCTTC	1 cut(s)	804
EarI	CTCTTC	1 cut(s)	804
EciI	GGCGGA	1 cut(s)	316
Eco130I	CCWWGG	2 cut(s)	894, 967
Eco24I	GRGCYC	2 cut(s)	179, 576
Eco32I	GATATC	2 cut(s)	1363, 1438
Eco47I	GGWCC	2 cut(s)	236, 1527
Eco57I	CTGAAG	1 cut(s)	828
Eco81I	CCTNAGG	1 cut(s)	1380
EcoRI	GAATTC	1 cut(s)	1059
EcoRII	CCWGG	1 cut(s)	134
EcoRV	GATATC	2 cut(s)	1363, 1438
EcoT14I	CCWWGG	2 cut(s)	894, 967
EcoT22I	ATGCAT	1 cut(s)	362
EcoT38I	GRGCYC	2 cut(s)	179, 576
ErhI	CCWWGG	2 cut(s)	894, 967
FaeI	CATG	6 cut(s)	898, 926, 971, 1189, 1346, 1545
FaqI	GGGAC	1 cut(s)	1262
FatI	CATG	6 cut(s)	894, 922, 967, 1185, 1342, 1541
FauI	CCCGC	1 cut(s)	184
FauNDI	CATATG	2 cut(s)	356, 1715
FblI	GTMKAC	1 cut(s)	1764
FokI	GGATG	4 cut(s)	985, 1202, 1298, 1385
FriOI	GRGCYC	2 cut(s)	179, 576
FspBI	CTAG	4 cut(s)	497, 554, 963, 1077
FspI	TGCGCA	1 cut(s)	544
GlaI	GCGC	4 cut(s)	282, 337, 519, 544
GsaI	CCCAGC	1 cut(s)	1596
HaeII	RGCGCY	1 cut(s)	339
HaeIII	GGCC	4 cut(s)	134, 242, 290, 1587
HapII	CCGG	5 cut(s)	239, 330, 687, 750, 1283
HhaI	GCGC	4 cut(s)	283, 338, 520, 545
Hin1II	CATG	6 cut(s)	898, 926, 971, 1189, 1346, 1545
Hin6I	GCGC	4 cut(s)	281, 336, 518, 543
HinP1I	GCGC	4 cut(s)	281, 336, 518, 543
HincII	GTYRAC	3 cut(s)	144, 535, 1483
HindII	GTYRAC	3 cut(s)	144, 535, 1483
HinfI	GANTC	9 cut(s)	11, 82, 101, 270, 400, 588, 788, 820, 1325
HpaI	GTTAAC	1 cut(s)	1483
HpaII	CCGG	5 cut(s)	239, 330, 687, 750, 1283
HphI	GGTGA	3 cut(s)	101, 745, 826
Hpy166II	GTNNAC	7 cut(s)	109, 144, 535, 1226, 1483, 1539, 1765
Hpy188I	TCNGA	8 cut(s)	81, 87, 188, 1065, 1108, 1271, 1458, 1650
Hpy188III	TCNNGA	7 cut(s)	234, 404, 935, 1138, 1358, 1561, 1673
Hpy8I	GTNNAC	7 cut(s)	109, 144, 535, 1226, 1483, 1539, 1765
Hpy99I	CGWCG	2 cut(s)	625, 1030
HpyAV	CCTTC	1 cut(s)	362
HpyCH4III	ACNGT	7 cut(s)	148, 217, 482, 604, 763, 1000, 1200
HpyCH4IV	ACGT	2 cut(s)	1028, 1761
HpyF3I	CTNAG	4 cut(s)	1125, 1268, 1380, 1493
HpySE526I	ACGT	2 cut(s)	1028, 1761
Hsp92II	CATG	6 cut(s)	898, 926, 971, 1189, 1346, 1545
HspAI	GCGC	4 cut(s)	281, 336, 518, 543
KspAI	GTTAAC	1 cut(s)	1483
Kzo9I	GATC	3 cut(s)	931, 1375, 1669
LmnI	GCTCC	4 cut(s)	188, 473, 579, 1619
LweI	GCATC	4 cut(s)	450, 963, 1313, 1669
MaeI	CTAG	4 cut(s)	497, 554, 963, 1077
MaeII	ACGT	2 cut(s)	1028, 1761
MaeIII	GTNAC	2 cut(s)	565, 1009
MalI	GATC	3 cut(s)	933, 1377, 1671
MbiI	CCGCTC	1 cut(s)	191
MboI	GATC	3 cut(s)	931, 1375, 1669
MboII	GAAGA	8 cut(s)	757, 821, 829, 1037, 1174, 1389, 1511, 1592
MfeI	CAATTG	2 cut(s)	128, 165
MflI	RGATCY	1 cut(s)	931
MhlI	GDGCHC	4 cut(s)	70, 179, 576, 1701
MlsI	TGGCCA	1 cut(s)	134
MluCI	AATT	5 cut(s)	128, 165, 1059, 1351, 1515
MluNI	TGGCCA	1 cut(s)	134
MmeI	TCCRAC	1 cut(s)	190
Mox20I	TGGCCA	1 cut(s)	134
Mph1103I	ATGCAT	1 cut(s)	362
MscI	TGGCCA	1 cut(s)	134
MseI	TTAA	3 cut(s)	681, 1113, 1482
Msp20I	TGGCCA	1 cut(s)	134
MspI	CCGG	5 cut(s)	239, 330, 687, 750, 1283
MspR9I	CCNGG	2 cut(s)	136, 751
MunI	CAATTG	2 cut(s)	128, 165
Mva1269I	GAATGC	3 cut(s)	229, 1178, 1235
MvaI	CCWGG	1 cut(s)	136
MvnI	CGCG	2 cut(s)	281, 1057
NciI	CCSGG	1 cut(s)	751
NcoI	CCATGG	2 cut(s)	894, 967
NdeI	CATATG	2 cut(s)	356, 1715
NdeII	GATC	3 cut(s)	931, 1375, 1669
NheI	GCTAGC	1 cut(s)	962
NlaIII	CATG	6 cut(s)	898, 926, 971, 1189, 1346, 1545
NlaIV	GGNNCC	5 cut(s)	575, 933, 1131, 1293, 1318
NmeAIII	GCCGAG	1 cut(s)	328
NmuCI	GTSAC	1 cut(s)	565
NsbI	TGCGCA	1 cut(s)	544
NsiI	ATGCAT	1 cut(s)	362
NspI	RCATGY	1 cut(s)	1545
PciI	ACATGT	1 cut(s)	1541
PctI	GAATGC	3 cut(s)	229, 1178, 1235
PfeI	GAWTC	9 cut(s)	11, 82, 101, 270, 400, 588, 788, 820, 1325
PscI	ACATGT	1 cut(s)	1541
PshBI	ATTAAT	1 cut(s)	1113
Psp6I	CCWGG	1 cut(s)	134
PspFI	CCCAGC	1 cut(s)	1592
PspGI	CCWGG	1 cut(s)	134
PspN4I	GGNNCC	5 cut(s)	575, 933, 1131, 1293, 1318
PspPI	GGNCC	4 cut(s)	236, 241, 1527, 1585
PstI	CTGCAG	1 cut(s)	1314
PsuI	RGATCY	1 cut(s)	931
RsaI	GTAC	6 cut(s)	601, 667, 719, 1144, 1225, 1260
RsaNI	GTAC	6 cut(s)	600, 666, 718, 1143, 1224, 1259
SaqAI	TTAA	3 cut(s)	681, 1113, 1482
Sau3AI	GATC	3 cut(s)	931, 1375, 1669
Sau96I	GGNCC	4 cut(s)	236, 241, 1527, 1585
ScrFI	CCNGG	2 cut(s)	136, 751
SduI	GDGCHC	4 cut(s)	70, 179, 576, 1701
SfaNI	GCATC	4 cut(s)	450, 963, 1313, 1669
SfcI	CTRYAG	1 cut(s)	1310
SinI	GGWCC	2 cut(s)	236, 1527
SmlI	CTYRAG	1 cut(s)	1356
SmoI	CTYRAG	1 cut(s)	1356
Sse9I	AATT	5 cut(s)	128, 165, 1059, 1351, 1515
SspMI	CTAG	4 cut(s)	497, 554, 963, 1077
StyD4I	CCNGG	2 cut(s)	134, 749
StyI	CCWWGG	2 cut(s)	894, 967
TaaI	ACNGT	7 cut(s)	148, 217, 482, 604, 763, 1000, 1200
TaiI	ACGT	2 cut(s)	1031, 1764
TaqI	TCGA	3 cut(s)	99, 405, 1025
TasI	AATT	5 cut(s)	128, 165, 1059, 1351, 1515
TatI	WGTACW	3 cut(s)	599, 1142, 1258
TauI	GCSGC	5 cut(s)	278, 281, 1057, 1096, 1342
TfiI	GAWTC	9 cut(s)	11, 82, 101, 270, 400, 588, 788, 820, 1325
Tru1I	TTAA	3 cut(s)	681, 1113, 1482
Tru9I	TTAA	3 cut(s)	681, 1113, 1482
TscAI	CASTG	4 cut(s)	609, 808, 846, 1372
TseFI	GTSAC	1 cut(s)	565
Tsp45I	GTSAC	1 cut(s)	565
TspDTI	ATGAA	2 cut(s)	1174, 1702
TspGWI	ACGGA	1 cut(s)	94
TspRI	CASTG	4 cut(s)	609, 808, 846, 1372
VpaK11BI	GGWCC	2 cut(s)	236, 1527
VspI	ATTAAT	1 cut(s)	1113
XapI	RAATTY	1 cut(s)	1059
XceI	RCATGY	1 cut(s)	1545
XmiI	GTMKAC	1 cut(s)	1764
XspI	CTAG	4 cut(s)	497, 554, 963, 1077
Zsp2I	ATGCAT	1 cut(s)	362

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.