MD14G1094000.v1.1

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0012382
Physical Location & Seq
Forward (+)
14030127 .. 14033867
3741 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1094000.v1.1.491

Sequence Viewer

Length: 2049 bp
ATGAAGAAGAACGATGCGCTGCCTTTCCTCACTTTCTCTCTTCTTCTCTTCGCCTCCAACCACCCCTCACTCTCTTCTCCGCCACCTAATGACACCTGGGCCCTCACCCAATTCCGCCTACAGACCGACACCCACGCCTACCTCCGCTCAAACTGGACCGGCTCCGATGCATGCACCCTCTGCTGGACCGGAGTCCGATGCTCCACCAACGAAGCCCGCGTCGTCGCTCTCTCCCTCCCCTCCCTCAACCTCCGGGGCCCACTTGATTCCCTCGCTTCCCTTGACCAGCTCCGCCTCCTCGACCTCCACAACAACCGCCTCAACGGCACCGTTTCTCCTCTCGTCAACTGCACCAAGCTCAAGCTCCTCTACCTCGCCGGCAACGACCTCTCTGGCGAAATTCCGTCGGAAATATCCTCCCTCCGGCGACTCCTCCGTCTCGACCTCGCCGACAACAACCTCCGGGGACCCTTTCCGGACAATCTCACCCGCCTCACCCGGCTCCTCACGCTCAGGCTCCAGAACAACGCCATCTCCGGTGAAGTCCCCGACCTCTCCGCCTCCCTTGCCAACCTCAAGGAGCTCAATTTCACTAACAACGAATTGTACGGACGGCTGCCGGAGGGTCTGCTGAAGAAGTTCGGCGTCAAAAGCTTTTCCGGGAACGAAGGGCTGTGCGGACTGAGCCCCTTGCCGGCTTGTTCATTCACAGGCACTAGCGATCCGCCCTCAGCGGCTTCATCCGAAACGGTGCTGTCTAATCCCAGCCAATTGCCTCAGACGACGACCCCAAACGAGCCGAGCAAAAAGCAACCGAGGAAGGGGCTGAGCACCGGCGTGATCATCGCGATAGTGATCGTGATTTGCGTGGCGATGCTGGTGGTTGTGTCGTTCCTTATGGTCCACTACTGCGCGAGAGACCGGTGCGGCTCTAGCTCGATGGCTGGGAGCGAGAGCGGGAAGAGAAGGAGCGGGAGCAGCTACGGAGCCGATCAGAAGAGGGTGTACGCCAACAGTGGGGGCGGCGGGGACAGCGACGGGACAAACGCCACCGACAGAAGCAAACTGGTGTTTTTTGACCGGAGGAAGCAGTTTGAGCTGGAGGATTTGCTGCGGGCATCGGCGGAGATGTTGGGGAAAGGAAGCCTGGGGACTGTGTACAAGGCGGTACTGGACGACGGGAGCACAATGGCGGTGAAGCGGCTCAAGGACGCGAACCCGTGCGAGAGAAAGGAGTTTGAGCAGTACATGGATGTGATTGGGAAGGTGAAGCATCCCAATGTGGTGAGGCTGAGTGCTTATTACTATGCCAAGGAGGAGAAGCTTCTTGTCTATGATTATCTCCCTAATGGAAGCTTGCACTCACTTCTGCATGGGAATCGGGGTCCGGGTAGAATTCCATTGGATTGGACTACAAGGATCAGCTTGGTGTTGGGTGCGGCTCGTGGGCTTGCCAGGATTCATGAGGTGTTCAGCTCTGCAAAAGTACCGCATGGCAATGTCAAATCTTCCAACGTCCTTCTGGACAAGAATGGCGTCGCTTGCATTTCCGACTTCGGCCTGTCTCTGCTTCTCAACCCGGTTCACGCCATCGCAAGATTGGGAGGATACCGAGCTCCCGAGCAGGCGGAGGTCAAGAGACTATCTCAGACGGCGGATGTGTACAGCTTTGGAGTCTTGCTGCTGGAGGTTCTAACGGGGAGAGCTCCGTCCCAGTACCCTTCTCCGGCCCGTCCCCGTGTGGAAGAGGAGGAGGAGGCGGTGGACCTTCCGAAATGGGTGAGGTCCGTGGTGAAGGAGGAGTGGACTGGGGAGGTGTTTGATCAAGAACTTCTGAGGTACAAGAACATTGAGGAGGAGCTTGTGGCAATGCTCCATGTGGGATTGGCTTGTGTTGTGCCTCAGCCTGAAAAGAGGCCTACAATGGTTGAAGTAACTAAGATGATTGAGGACATCCGAGTCGAGAGATCTCCTCTCGGAGAAGACTACGATGATTCCCGCAATTCACTTTCGCCTTCTCTCGCCACCACCGAAGACGGGCTGGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0009832 GO:0009834 GO:0009987 GO:0016020 GO:0042546 GO:0044085 GO:0044464 GO:0071554 GO:0071669 GO:0071840 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

683

Amino Acids

74.67

Weight (kDa)

7.53

Isoelectric Point (pI)

47.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 89 - 198 1.3e-08 Leucine-rich repeat region
PK_Tyr_Ser-Thr PF07714 376 - 647 3.2e-32 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 376 - 647 5.2e-32 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012382)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G36570
fragaria_vesca FvH4_6g17500
malus_domestica MD12G1097300.v1.1 MD14G1094000.v1.1
prunus_persica Prupe.7G120500_v2.0.a1
pyrus_communis pycom12g09760 pycom14g09180
rosa_chinensis RchiOBHm_Chr3g0471741
rosa_laevigata RLG00000024137
rosa_multiflora Rmu_co8460341.1_g000001 Rmu_sc0013806.1_g000002
rosa_roxburghii Rroxscaffold_6G00409590
rosa_rugosa Rorug03G0119500
rosa_samantha Rh3AG170800 Rh3BG196500 Rh3CG187200 Rh3DG178600
rosa_wichuraiana Rw0G009060 Rw3G016950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 435, 1958, 2042
AccB1I GGYRCC 1 cut(s) 326
AccBSI CCGCTC 3 cut(s) 147, 957, 972
AccII CGCG 4 cut(s) 219, 848, 914, 1214
AccIII TCCGGA 1 cut(s) 475
AclWI GGATC 2 cut(s) 716, 1427
AcsI RAATTY 2 cut(s) 399, 1395
AcuI CTGAAG 1 cut(s) 653
AcyI GRCGYC 2 cut(s) 645, 1536
AfaI GTAC 9 cut(s) 608, 1007, 1160, 1170, 1247, 1488, 1664, 1718, 1841
AfiI CCNNNNNNNGG 7 cut(s) 183, 423, 694, 821, 1017, 1726, 2037
AgeI ACCGGT 1 cut(s) 921
AgsI TTSAA 1 cut(s) 1931
AjnI CCWGG 3 cut(s) 95, 1146, 1454
AleI CACNNNNGTG 1 cut(s) 836
Alw21I GWGCWC 5 cut(s) 585, 833, 1187, 1618, 1708
Alw26I GTCTC 4 cut(s) 443, 912, 1569, 1633
AlwI GGATC 2 cut(s) 716, 1427
Ama87I CYCGRG 1 cut(s) 1619
Aor13HI TCCGGA 1 cut(s) 475
AoxI GGCC 5 cut(s) 99, 256, 1558, 1728, 1916
ApaI GGGCCC 2 cut(s) 103, 260
ApeKI GCWGC 5 cut(s) 19, 616, 978, 1111, 1681
ApoI RAATTY 2 cut(s) 399, 1395
ArsI GACNNNNNNTTYG 2 cut(s) 204, 236
AsiGI ACCGGT 1 cut(s) 921
Asp700I GAANNNNTTC 1 cut(s) 638
AspLEI GCGC 2 cut(s) 19, 914
AsuC2I CCSGG 6 cut(s) 254, 464, 499, 661, 1389, 1580
AsuHPI GGTGA 9 cut(s) 97, 478, 487, 551, 1207, 1279, 1297, 1792, 1804
AvaI CYCGRG 1 cut(s) 1619
AvaII GGWCC 7 cut(s) 156, 186, 467, 901, 1385, 1765, 1785
BaeGI GKGCMC 2 cut(s) 103, 260
BanI GGYRCC 1 cut(s) 326
BanII GRGCYC 6 cut(s) 103, 260, 585, 689, 1618, 1708
BarI GAAGNNNNNNTAC 2 cut(s) 989, 1021
BauI CACGAG 1 cut(s) 1443
BbsI GAAGAC 2 cut(s) 1989, 2040
Bbv12I GWGCWC 5 cut(s) 585, 833, 1187, 1618, 1708
BbvCI CCTCAGC 2 cut(s) 730, 1902
BbvI GCAGC 5 cut(s) 6, 603, 990, 1098, 1668
BccI CCATC 3 cut(s) 539, 934, 1598
BceAI ACGGC 3 cut(s) 340, 629, 1668
BcgI CGANNNNNNTGC 2 cut(s) 1361, 1395
BciT130I CCWGG 3 cut(s) 97, 1148, 1456
BciVI GTATCC 1 cut(s) 1601
BclI TGATCA 2 cut(s) 840, 1822
BcnI CCSGG 6 cut(s) 254, 464, 499, 661, 1389, 1580
BcoDI GTCTC 4 cut(s) 443, 912, 1569, 1633
BfaI CTAG 2 cut(s) 717, 933
BfmI CTRYAG 1 cut(s) 119
BfuI GTATCC 1 cut(s) 1601
BglI GCCNNNNNGGC 1 cut(s) 324
BglII AGATCT 1 cut(s) 1967
BlpI GCTNAGC 1 cut(s) 827
Bme1390I CCNGG 9 cut(s) 97, 254, 464, 499, 661, 1148, 1389, 1456, 1580
Bme18I GGWCC 7 cut(s) 156, 186, 467, 901, 1385, 1765, 1785
BmeT110I CYCGRG 1 cut(s) 1619
BmrFI CCNGG 9 cut(s) 97, 254, 464, 499, 661, 1148, 1389, 1456, 1580
BmrI ACTGGG 2 cut(s) 1708, 1818
BmsI GCATC 6 cut(s) 4, 157, 188, 864, 1127, 1282
BmuI ACTGGG 2 cut(s) 1708, 1818
BoxI GACNNNNGTC 1 cut(s) 191
BpiI GAAGAC 2 cut(s) 1989, 2040
BplI GAGNNNNNCTC 4 cut(s) 1630, 1662, 1957, 1989
BpmI CTGGAG 3 cut(s) 503, 1121, 1706
Bpu10I CCTNAGC 3 cut(s) 512, 730, 1902
Bpu1102I GCTNAGC 1 cut(s) 827
BpuEI CTTGAG 3 cut(s) 344, 560, 1190
BpuMI CCSGG 6 cut(s) 254, 464, 499, 661, 1389, 1580
BsaBI GATNNNNATC 1 cut(s) 854
BsaHI GRCGYC 2 cut(s) 645, 1536
BsaI GGTCTC 1 cut(s) 912
BsaJI CCNNGG 7 cut(s) 96, 253, 463, 815, 1147, 1311, 1788
BsaWI WCCGGW 5 cut(s) 188, 475, 536, 921, 1080
BsaXI ACNNNNNCTCC 4 cut(s) 319, 349, 518, 548
Bsc4I CCNNNNNNNGG 7 cut(s) 183, 423, 694, 821, 1017, 1726, 2037
Bse118I RCCGGY 5 cut(s) 158, 377, 694, 833, 921
Bse1I ACTGG 5 cut(s) 158, 1071, 1176, 1714, 1813
Bse3DI GCAATG 2 cut(s) 1504, 1875
Bse8I GATNNNNATC 1 cut(s) 854
BseAI TCCGGA 1 cut(s) 475
BseBI CCWGG 3 cut(s) 97, 1148, 1456
BseDI CCNNGG 7 cut(s) 96, 253, 463, 815, 1147, 1311, 1788
BseGI GGATG 5 cut(s) 740, 1258, 1273, 1663, 1953
BseJI GATNNNNATC 1 cut(s) 854
BseLI CCNNNNNNNGG 7 cut(s) 183, 423, 694, 821, 1017, 1726, 2037
BseMI GCAATG 2 cut(s) 1504, 1875
BseMII CTCAG 9 cut(s) 526, 674, 744, 791, 818, 1283, 1661, 1826, 1916
BseNI ACTGG 5 cut(s) 158, 1071, 1176, 1714, 1813
BseSI GKGCMC 2 cut(s) 103, 260
BseXI GCAGC 5 cut(s) 6, 603, 990, 1098, 1668
BseYI CCCAGC 2 cut(s) 764, 944
BsgI GTGCAG 1 cut(s) 334
Bsh1236I CGCG 4 cut(s) 219, 848, 914, 1214
BshFI GGCC 5 cut(s) 101, 258, 1560, 1730, 1918
BshNI GGYRCC 1 cut(s) 326
BshTI ACCGGT 1 cut(s) 921
BsiHKAI GWGCWC 5 cut(s) 585, 833, 1187, 1618, 1708
BsiHKCI CYCGRG 1 cut(s) 1619
BslFI GGGAC 7 cut(s) 480, 530, 1043, 1054, 1165, 1696, 1719
BslI CCNNNNNNNGG 7 cut(s) 183, 423, 694, 821, 1017, 1726, 2037
BsmAI GTCTC 4 cut(s) 443, 912, 1569, 1633
BsmBI CGTCTC 1 cut(s) 443
BsmFI GGGAC 7 cut(s) 480, 530, 1043, 1054, 1165, 1696, 1719
BsnI GGCC 5 cut(s) 101, 258, 1560, 1730, 1918
Bso31I GGTCTC 1 cut(s) 912
BsoBI CYCGRG 1 cut(s) 1619
Bsp120I GGGCCC 2 cut(s) 99, 256
Bsp1286I GDGCHC 8 cut(s) 103, 260, 585, 689, 833, 1187, 1618, 1708
Bsp13I TCCGGA 1 cut(s) 475
Bsp1407I TGTACA 2 cut(s) 1158, 1662
Bsp143I GATC 7 cut(s) 721, 840, 855, 991, 1419, 1822, 1967
Bsp1720I GCTNAGC 1 cut(s) 827
Bsp68I TCGCGA 1 cut(s) 848
BspANI GGCC 5 cut(s) 101, 258, 1560, 1730, 1918
BspCNI CTCAG 9 cut(s) 525, 675, 743, 790, 819, 1284, 1660, 1827, 1915
BspEI TCCGGA 1 cut(s) 475
BspFNI CGCG 4 cut(s) 219, 848, 914, 1214
BspHI TCATGA 1 cut(s) 1462
BspPI GGATC 2 cut(s) 716, 1427
BspT107I GGYRCC 1 cut(s) 326
BspTNI GGTCTC 1 cut(s) 912
BsrBI CCGCTC 3 cut(s) 147, 957, 972
BsrDI GCAATG 2 cut(s) 1504, 1875
BsrFI RCCGGY 5 cut(s) 158, 377, 694, 833, 921
BsrGI TGTACA 2 cut(s) 1158, 1662
BsrI ACTGG 5 cut(s) 158, 1071, 1176, 1714, 1813
BssAI RCCGGY 5 cut(s) 158, 377, 694, 833, 921
BssECI CCNNGG 7 cut(s) 96, 253, 463, 815, 1147, 1311, 1788
BssMI GATC 7 cut(s) 721, 840, 855, 991, 1419, 1822, 1967
BssNI GRCGYC 2 cut(s) 645, 1536
BssSI CACGAG 1 cut(s) 1443
BssT1I CCWWGG 1 cut(s) 1311
Bst2BI CACGAG 1 cut(s) 1443
Bst2UI CCWGG 3 cut(s) 97, 1148, 1456
Bst4CI ACNGT 4 cut(s) 331, 751, 1016, 1156
Bst6I CTCTTC 6 cut(s) 45, 53, 79, 956, 992, 1740
BstACI GRCGYC 2 cut(s) 645, 1536
BstAPI GCANNNNNTGC 1 cut(s) 180
BstAUI TGTACA 2 cut(s) 1158, 1662
BstC8I GCNNGC 9 cut(s) 172, 217, 379, 696, 1116, 1358, 1452, 1543, 1626
BstDSI CCRYGG 1 cut(s) 1788
BstF5I GGATG 5 cut(s) 740, 1258, 1273, 1663, 1953
BstFNI CGCG 4 cut(s) 219, 848, 914, 1214
BstHHI GCGC 2 cut(s) 19, 914
BstKTI GATC 7 cut(s) 724, 843, 858, 994, 1422, 1825, 1970
BstMAI GTCTC 4 cut(s) 443, 912, 1569, 1633
BstMBI GATC 7 cut(s) 721, 840, 855, 991, 1419, 1822, 1967
BstNI CCWGG 3 cut(s) 97, 1148, 1456
BstNSI RCATGY 1 cut(s) 174
BstPAI GACNNNNGTC 1 cut(s) 191
BstSCI CCNGG 9 cut(s) 95, 252, 462, 497, 659, 1146, 1387, 1454, 1578
BstSFI CTRYAG 1 cut(s) 119
BstSLI GKGCMC 2 cut(s) 103, 260
BstUI CGCG 4 cut(s) 219, 848, 914, 1214
BstV1I GCAGC 5 cut(s) 6, 603, 990, 1098, 1668
BstV2I GAAGAC 2 cut(s) 1989, 2040
BstX2I RGATCY 1 cut(s) 1967
BstXI CCANNNNNNTGG 1 cut(s) 1407
BstYI RGATCY 1 cut(s) 1967
BsuI GTATCC 1 cut(s) 1601
BsuRI GGCC 5 cut(s) 101, 258, 1560, 1730, 1918
BtgI CCRYGG 1 cut(s) 1788
BtgZI GCGATG 3 cut(s) 829, 887, 1576
BtsCI GGATG 5 cut(s) 740, 1258, 1273, 1663, 1953
BtsIMutI CAGTG 1 cut(s) 1021
BtuMI TCGCGA 1 cut(s) 848
Cac8I GCNNGC 9 cut(s) 172, 217, 379, 696, 1116, 1358, 1452, 1543, 1626
CciI TCATGA 1 cut(s) 1462
CfoI GCGC 2 cut(s) 19, 914
Cfr10I RCCGGY 5 cut(s) 158, 377, 694, 833, 921
CseI GACGC 4 cut(s) 208, 634, 1220, 1525
Csp6I GTAC 9 cut(s) 607, 1006, 1159, 1169, 1246, 1487, 1663, 1717, 1840
CspAI ACCGGT 1 cut(s) 921
CviAII CATG 6 cut(s) 171, 1249, 1373, 1463, 1493, 1877
CviQI GTAC 9 cut(s) 607, 1006, 1159, 1169, 1246, 1487, 1663, 1717, 1840
DpnI GATC 7 cut(s) 723, 842, 857, 993, 1421, 1824, 1969
DpnII GATC 7 cut(s) 721, 840, 855, 991, 1419, 1822, 1967
DrdI GACNNNNNNGTC 3 cut(s) 435, 1958, 2042
DseDI GACNNNNNNGTC 3 cut(s) 435, 1958, 2042
Eam1104I CTCTTC 6 cut(s) 45, 53, 79, 956, 992, 1740
EarI CTCTTC 6 cut(s) 45, 53, 79, 956, 992, 1740
EciI GGCGGA 8 cut(s) 69, 104, 281, 547, 714, 1139, 1643, 1670
Ecl136II GAGCTC 3 cut(s) 583, 1616, 1706
Eco130I CCWWGG 1 cut(s) 1311
Eco147I AGGCCT 1 cut(s) 1918
Eco24I GRGCYC 6 cut(s) 103, 260, 585, 689, 1618, 1708
Eco31I GGTCTC 1 cut(s) 912
Eco47I GGWCC 7 cut(s) 156, 186, 467, 901, 1385, 1765, 1785
Eco53kI GAGCTC 3 cut(s) 583, 1616, 1706
Eco57I CTGAAG 1 cut(s) 653
Eco88I CYCGRG 1 cut(s) 1619
EcoICRI GAGCTC 3 cut(s) 583, 1616, 1706
EcoO109I RGGNCCY 3 cut(s) 100, 256, 467
EcoRI GAATTC 1 cut(s) 1395
EcoRII CCWGG 3 cut(s) 95, 1146, 1454
EcoT14I CCWWGG 1 cut(s) 1311
EcoT22I ATGCAT 1 cut(s) 172
EcoT38I GRGCYC 6 cut(s) 103, 260, 585, 689, 1618, 1708
ErhI CCWWGG 1 cut(s) 1311
Esp3I CGTCTC 1 cut(s) 443
FaeI CATG 6 cut(s) 174, 1252, 1376, 1466, 1496, 1880
FaiI YATR 9 cut(s) 172, 899, 1250, 1308, 1335, 1374, 1464, 1494, 1878
FaqI GGGAC 7 cut(s) 480, 530, 1043, 1054, 1165, 1696, 1719
FatI CATG 6 cut(s) 170, 1248, 1372, 1462, 1492, 1876
FauI CCCGC 7 cut(s) 224, 497, 950, 965, 1019, 1107, 2006
FbaI TGATCA 2 cut(s) 840, 1822
FokI GGATG 5 cut(s) 727, 1260, 1265, 1670, 1940
FriOI GRGCYC 6 cut(s) 103, 260, 585, 689, 1618, 1708
FspBI CTAG 2 cut(s) 717, 933
GlaI GCGC 2 cut(s) 18, 913
GsaI CCCAGC 2 cut(s) 768, 948
GsuI CTGGAG 3 cut(s) 503, 1121, 1706
HaeIII GGCC 5 cut(s) 101, 258, 1560, 1730, 1918
HgaI GACGC 4 cut(s) 208, 634, 1220, 1525
HhaI GCGC 2 cut(s) 19, 914
Hin1I GRCGYC 2 cut(s) 645, 1536
Hin1II CATG 6 cut(s) 174, 1252, 1376, 1466, 1496, 1880
Hin6I GCGC 2 cut(s) 17, 912
HinP1I GCGC 2 cut(s) 17, 912
HincII GTYRAC 1 cut(s) 346
HindII GTYRAC 1 cut(s) 346
HindIII AAGCTT 3 cut(s) 652, 1322, 1354
HinfI GANTC 8 cut(s) 192, 266, 429, 1378, 1459, 1674, 1959, 1994
HphI GGTGA 9 cut(s) 97, 478, 487, 551, 1207, 1279, 1297, 1792, 1804
Hpy166II GTNNAC 8 cut(s) 346, 904, 1006, 1159, 1585, 1663, 1765, 1806
Hpy8I GTNNAC 8 cut(s) 346, 904, 1006, 1159, 1585, 1663, 1765, 1806
Hpy99I CGWCG 7 cut(s) 224, 227, 409, 787, 1040, 1181, 1541
HpyAV CCTTC 9 cut(s) 662, 814, 960, 1258, 1529, 1731, 1778, 1789, 2025
HpyCH4III ACNGT 4 cut(s) 331, 751, 1016, 1156
HpyCH4IV ACGT 1 cut(s) 1515
HpyCH4V TGCA 7 cut(s) 170, 174, 351, 1360, 1372, 1481, 1545
HpySE526I ACGT 1 cut(s) 1515
Hsp92I GRCGYC 2 cut(s) 645, 1536
Hsp92II CATG 6 cut(s) 174, 1252, 1376, 1466, 1496, 1880
HspAI GCGC 2 cut(s) 17, 912
KflI GGGWCCC 1 cut(s) 467
Kpn2I TCCGGA 1 cut(s) 475
KroI GCCGGC 2 cut(s) 377, 694
KroNI GCCGGC 2 cut(s) 379, 696
Ksp22I TGATCA 2 cut(s) 840, 1822
Kzo9I GATC 7 cut(s) 721, 840, 855, 991, 1419, 1822, 1967
Lsp1109I GCAGC 5 cut(s) 6, 603, 990, 1098, 1668
LweI GCATC 6 cut(s) 4, 157, 188, 864, 1127, 1282
MaeI CTAG 2 cut(s) 717, 933
MaeII ACGT 1 cut(s) 1515
MaeIII GTNAC 1 cut(s) 1933
MalI GATC 7 cut(s) 723, 842, 857, 993, 1421, 1824, 1969
MbiI CCGCTC 3 cut(s) 147, 957, 972
MboI GATC 7 cut(s) 721, 840, 855, 991, 1419, 1822, 1967
MfeI CAATTG 1 cut(s) 770
MflI RGATCY 1 cut(s) 1967
MhlI GDGCHC 8 cut(s) 103, 260, 585, 689, 833, 1187, 1618, 1708
MluCI AATT 7 cut(s) 110, 399, 586, 602, 770, 1395, 2002
MlyI GAGTC 4 cut(s) 201, 423, 1683, 1968
MmeI TCCRAC 4 cut(s) 81, 387, 1536, 1575
Mph1103I ATGCAT 1 cut(s) 172
MroI TCCGGA 1 cut(s) 475
MroNI GCCGGC 2 cut(s) 377, 694
MroXI GAANNNNTTC 1 cut(s) 638
MslI CAYNNNNRTG 4 cut(s) 836, 1253, 1278, 1497
MspA1I CMGCKG 1 cut(s) 734
MspR9I CCNGG 9 cut(s) 97, 254, 464, 499, 661, 1148, 1389, 1456, 1580
MunI CAATTG 1 cut(s) 770
MvaI CCWGG 3 cut(s) 97, 1148, 1456
MvnI CGCG 4 cut(s) 219, 848, 914, 1214
NaeI GCCGGC 2 cut(s) 379, 696
NciI CCSGG 6 cut(s) 254, 464, 499, 661, 1389, 1580
NdeII GATC 7 cut(s) 721, 840, 855, 991, 1419, 1822, 1967
NgoMIV GCCGGC 2 cut(s) 377, 694
NlaIII CATG 6 cut(s) 174, 1252, 1376, 1466, 1496, 1880
NmeAIII GCCGAG 1 cut(s) 825
NruI TCGCGA 1 cut(s) 848
NsiI ATGCAT 1 cut(s) 172
NspI RCATGY 1 cut(s) 174
OliI CACNNNNGTG 1 cut(s) 836
PaeI GCATGC 1 cut(s) 174
PagI TCATGA 1 cut(s) 1462
PceI AGGCCT 1 cut(s) 1918
PcsI WCGNNNNNNNCGW 5 cut(s) 216, 381, 447, 864, 2028
PdiI GCCGGC 2 cut(s) 379, 696
PdmI GAANNNNTTC 1 cut(s) 638
PfeI GAWTC 4 cut(s) 266, 1378, 1459, 1994
PfoI TCCNGGA 1 cut(s) 659
PinAI ACCGGT 1 cut(s) 921
PleI GAGTC 4 cut(s) 200, 423, 1682, 1967
PpsI GAGTC 4 cut(s) 200, 423, 1682, 1967
PpuMI RGGWCCY 1 cut(s) 467
PshAI GACNNNNGTC 1 cut(s) 191
Psp124BI GAGCTC 3 cut(s) 585, 1618, 1708
Psp5II RGGWCCY 1 cut(s) 467
Psp6I CCWGG 3 cut(s) 95, 1146, 1454
PspFI CCCAGC 2 cut(s) 764, 944
PspGI CCWGG 3 cut(s) 95, 1146, 1454
PspOMI GGGCCC 2 cut(s) 99, 256
PspPPI RGGWCCY 1 cut(s) 467
PsuI RGATCY 1 cut(s) 1967
RruI TCGCGA 1 cut(s) 848
RsaI GTAC 9 cut(s) 608, 1007, 1160, 1170, 1247, 1488, 1664, 1718, 1841
RsaNI GTAC 9 cut(s) 607, 1006, 1159, 1169, 1246, 1487, 1663, 1717, 1840
RseI CAYNNNNRTG 4 cut(s) 836, 1253, 1278, 1497
SacI GAGCTC 3 cut(s) 585, 1618, 1708
Sau3AI GATC 7 cut(s) 721, 840, 855, 991, 1419, 1822, 1967
SchI GAGTC 4 cut(s) 201, 423, 1683, 1968
ScrFI CCNGG 9 cut(s) 97, 254, 464, 499, 661, 1148, 1389, 1456, 1580
SduI GDGCHC 8 cut(s) 103, 260, 585, 689, 833, 1187, 1618, 1708
SfaNI GCATC 6 cut(s) 4, 157, 188, 864, 1127, 1282
SfcI CTRYAG 1 cut(s) 119
SgrAI CRCCGGYG 1 cut(s) 833
SinI GGWCC 7 cut(s) 156, 186, 467, 901, 1385, 1765, 1785
SmiMI CAYNNNNRTG 4 cut(s) 836, 1253, 1278, 1497
SmlI CTYRAG 3 cut(s) 359, 575, 1205
SmoI CTYRAG 3 cut(s) 359, 575, 1205
SphI GCATGC 1 cut(s) 174
Sse9I AATT 7 cut(s) 110, 399, 586, 602, 770, 1395, 2002
SseBI AGGCCT 1 cut(s) 1918
SspMI CTAG 2 cut(s) 717, 933
SstI GAGCTC 3 cut(s) 585, 1618, 1708
StuI AGGCCT 1 cut(s) 1918
StyD4I CCNGG 9 cut(s) 95, 252, 462, 497, 659, 1146, 1387, 1454, 1578
StyI CCWWGG 1 cut(s) 1311
TaaI ACNGT 4 cut(s) 331, 751, 1016, 1156
TaiI ACGT 1 cut(s) 1518
TaqI TCGA 4 cut(s) 300, 441, 938, 1962
TaqII GACCGA 1 cut(s) 140
TasI AATT 7 cut(s) 110, 399, 586, 602, 770, 1395, 2002
TatI WGTACW 3 cut(s) 1158, 1245, 1662
TauI GCSGC 5 cut(s) 737, 930, 1026, 1204, 1442
TfiI GAWTC 4 cut(s) 266, 1378, 1459, 1994
TscAI CASTG 1 cut(s) 1021
TseI GCWGC 5 cut(s) 19, 616, 978, 1111, 1681
TspDTI ATGAA 4 cut(s) 17, 693, 729, 1451
TspGWI ACGGA 6 cut(s) 393, 425, 624, 999, 1698, 1777
TspRI CASTG 1 cut(s) 1021
VpaK11BI GGWCC 7 cut(s) 156, 186, 467, 901, 1385, 1765, 1785
XapI RAATTY 2 cut(s) 399, 1395
XceI RCATGY 1 cut(s) 174
XcmI CCANNNNNNNNNTGG 2 cut(s) 1519, 1597
XmnI GAANNNNTTC 1 cut(s) 638
XspI CTAG 2 cut(s) 717, 933
Zsp2I ATGCAT 1 cut(s) 172
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.