Rorug03G0119500

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0012382
Physical Location & Seq
Reverse (-)
9661080 .. 9664274
3195 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0119500.1

Sequence Viewer

Length: 3042 bp
ATGAGCACAGGTCTAGAATCTGCAACACTACCAAGTTTTGGAAATGAATCTGATCATCTGGCACTGCTAGACTTCAAGAAAAGAATCACTGAAGATCCTCTCCATATCATGAGCTCATGGAATGAATCCATGCATTTCTGCAGTTGGATAGGTGTCACATGCAACAACTCCACCAGAAGAGTCGTGACTTTGAACTTGCAAGCTCAAAAGTTGGCTGGCTCCATACCACCTTCTATAGGGAATCTTACTCATCTCACTGGAATCAACTTGATAAACAACAACTTTTATGGTGGAATTCCTCAGGAAATGGGTCGTCTCTTGCGCCTGCAATATCTCAACATGTCTCAAAACTCCTTCGGTGGGAAAATTCCAACTAATATATCTCACTGTACGCAGCTGACAATGATTGATGTTTTTTCCAATAAACTCATTGGGTCAATTCCCGACCAACTCAGTTCATTGTTGAAATTAACTGTGTTATGGATTGGTCGGAACAATCTCACTGGAACCATCCCACGTTGGATTGGGAACTTTTCTTCTTTGTTTGCACTTTCTCTTGGTGAAAACAACTTGCAAGGAAGCATACCTAATGAGCTAGGGCGTCTAACTGCTTTGCAGAGATTCATACTTACCTCAAATAATCTTTCTGGTATGATTCCTTCTTCGATATATAACATTTCCTCCATATGTTATTTCACTGTTACTCAGAATCAACTGCATGGGGAGCTCCCACAAAACATTGGCATTACTCTTCCTAATCTGGAGGTATTTGCCGGCGGTGTCAACAAATTCACAGGAACTGTTCCACCATCATTGTCAAATGCTTCTAGACTTCGGATTCTTGATTTTGCTCAAAATGGTCTCACTGGTAAACTCCCTGCTGAAAATCTTGGAAGGTTGATATGGTTAATTAGACTGAACTTTGACATAAACAGACTGGGAAGTGGTAAAGCTGGTGGCCTAAATTTTCTCAATTTCCTGACTAATTGTACTAGTCTTGAGGTGTTGGGTCTTAGCCGCAATCACCTTGGAGGAGAATTACCAGCATCCATAGCCAACCTTTCTACCCAGCTAAAAATTCTTACTCTGGGGGAAAATTTGATACATGGAAGCCTCCCTACTGGCATTGGAAATCTGGCAAACTTGACACTTCTGGGAATAGAAGGTAACCACATATCCGGTAGTCTCCCTGATGCAATCGGGAAGCTTCACAAGTTAGAAGGACTGGAATTGAATCTGAACAGATTTTCAGGGCCAATCCCATCCTCCCTAGGTAACTTGACTTCAGTGACAAGGCTCTTCATGGATGGGAATAGGTTTCAGGGAAGCATACCTCCAAGTCTTGGGAACTGCCAAAATCTATTGATACTGAACCTTTCTAGTAACAATCTAAATGGCACAATACCTAGAGAGGTAGTGGCGATTAAATCCCTTTCGATTTCTTTGACAATGTCTAACAACTCTTTGACTGGTTCACTACCATCTGAAGTGGGTGGTTTGGTAAATCTCGCAGAGCTAGACATATCAGGAAACAAATTATCGGGTGAAATCCCCGAAACCCTTGGCAGTTGTATTAGTTTGGAACGCCTGCTTTTGAAAGGTAATGAATTCAGTAGACATATTCCTCAGTCTATGGAAAAGCTGAGAGGCTTGGAAGAGTTGGATATTTCACACAATAACTTATCTGGCCAGGTTCCTGAATTTGTAGGCAAGTTTCGAGCTCTCAAGTATCTCAATCTTTCTCACAATGATTTTGAGGGTGAATTGCCTAAAGAAGGAATCTTTTCAAATGCAACTGGTATCTCAGTGCTCGGAAATGATAAGCTCTGTGGTGGAATTCCAGAATTAGTTCTACCTGCATGTTCTAGCAGAAAGCCTCATTCATTGCGAGGACTACTTGCCCCAAAAGTGCTAATCCCTTTAACTAGTGCAATTACTTTAATAATTGCTCTTTCCTGCTTAGTTGCTGCACGTTCACTGATGAAAAAGTCGAGAGATGGAGTTTTGACTTCATCTTCTCATACTGATTCATATCCAAGTATCTCTTACTCGGAACTTTTTCGGTCAACTAACGGGTTTTCTGTGGACAATCTGATTGCTTCAGGAAGTTTTGGTTCTGTATACAAAGGATTACTGAGTAGTAATGGAATGGTAGTTGCTGTTAAGGTATTAAACCTTCAACAACAAGGAGCTTCAAAGAGTTTCATTGATGAATGCAAAGCTCTAAGAAGTATAAGGCACCGCAATCTTCTCAAGATCATAACAGCTTGCTCAAGCACCGATAATCAGGGTAACGACTTCAGAAGTCTGGTTTTCAATTTCATGGAAAATGGAAGTCTAGATCCTTGGCTGCACCCTAGAGAAGATGACGGATCTCAAAGTAAGAGATTGAGCCTTATCCAAAGGCTTAATATTGCCATTGATGTTGCTTGCGCATTGGATTATCTACATGACCATTGTGAAACATCCATTGTTCATTGTGATCTAAAGCCAAGCAACGTCCTTCTCGATGAGGATATGGTAGCCCATGTTGGTGACTTTGGTTTAGCAAGCTTCCTCTTCGAAGCATCAGATAATCATTCCAAAAGTCGGACCATGTCAGCTGGGCTAAAGGGTTCCGTAGGCTACGTTCCTCCAGAATATGGCATGGGATGTCAAGTTTCCATTCTGGGAGATATCTATAGCTATGGGATTCTATTGCTAGAAATGTTCACAGGGAAAAGGCCAACGGACGAAATGTTCAAAGATGGTCTAAGCATTCACCAGTTCACGGCCATGGCTTTCCCTGACCGTATCATGGACATAGTTGACACTTCATTGCTCCTGGAGACAGATGAGGATAATGATGGTGATGATGACAAATACAGCAATGACATACAAGAAAGAAGATTGGAAGAATGCTTGATTTCAGTGATGCAGATTGGTCTCTCATGCTCCACAGTATCACCAAGTGAGCGCATTCTGATGAATGTGGTTGTGAACAAGATGACTGCAATTAGAGATTCCTATCTCAAATTGACCAAACACAAGTTTGTCACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0009832 GO:0009834 GO:0009987 GO:0016020 GO:0042546 GO:0044085 GO:0044464 GO:0071554 GO:0071669 GO:0071840 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

1013

Amino Acids

110.1

Weight (kDa)

6.26

Isoelectric Point (pI)

37.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 16 - 55 1.3e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 101 - 212 5.1e-10 Leucine-rich repeat region
LRR_8 PF13855 156 - 215 5.2e-07 Leucine rich repeat
LRR_14 PF23598 324 - 454 1.3e-09 Leucine-rich repeat region
LRR_14 PF23598 444 - 583 7.2e-09 Leucine-rich repeat region
LRR_8 PF13855 526 - 585 7.8e-08 Leucine rich repeat
Pkinase PF00069 694 - 925 1.8e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 695 - 915 2.1e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012382)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G36570
fragaria_vesca FvH4_6g17500
malus_domestica MD12G1097300.v1.1 MD14G1094000.v1.1
prunus_persica Prupe.7G120500_v2.0.a1
pyrus_communis pycom12g09760 pycom14g09180
rosa_chinensis RchiOBHm_Chr3g0471741
rosa_laevigata RLG00000024137
rosa_multiflora Rmu_co8460341.1_g000001 Rmu_sc0013806.1_g000002
rosa_roxburghii Rroxscaffold_6G00409590
rosa_rugosa Rorug03G0119500
rosa_samantha Rh3AG170800 Rh3BG196500 Rh3CG187200 Rh3DG178600
rosa_wichuraiana Rw0G009060 Rw3G016950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2434
Acc36I ACCTGC 1 cut(s) 1864
AccB1I GGYRCC 1 cut(s) 2238
AccB7I CCANNNNNTGG 3 cut(s) 38, 1343, 2642
AccI GTMKAC 2 cut(s) 1615, 2121
AciI CCGC 3 cut(s) 777, 1018, 2242
AclWI GGATC 3 cut(s) 89, 2336, 2380
AcoI YGGCCR 2 cut(s) 1687, 2772
AcsI RAATTY 9 cut(s) 294, 366, 788, 964, 1077, 1096, 1607, 1700, 1836
AcuI CTGAAG 5 cut(s) 111, 1269, 1506, 2085, 2284
AcyI GRCGYC 1 cut(s) 601
AdeI CACNNNGTG 1 cut(s) 2951
AfaI GTAC 2 cut(s) 391, 991
AfiI CCNNNNNNNGG 9 cut(s) 38, 236, 360, 1343, 1775, 2589, 2642, 2770, 2797
AflIII ACRYGT 1 cut(s) 339
AhlI ACTAGT 2 cut(s) 992, 1925
AjnI CCWGG 2 cut(s) 1689, 2823
AloI GAACNNNNNNTCC 2 cut(s) 2723, 2755
Alw21I GWGCWC 5 cut(s) 8, 116, 729, 1723, 1812
Alw26I GTCTC 6 cut(s) 320, 348, 866, 1190, 2822, 2930
AlwI GGATC 3 cut(s) 89, 2336, 2380
AlwNI CAGNNNCTG 1 cut(s) 800
AoxI GGCC 5 cut(s) 958, 1253, 1687, 2723, 2772
ApeKI GCWGC 3 cut(s) 394, 1967, 2350
ApoI RAATTY 9 cut(s) 294, 366, 788, 964, 1077, 1096, 1607, 1700, 1836
Asp700I GAANNNNTTC 3 cut(s) 1783, 1848, 2058
AspA2I CCTAGG 1 cut(s) 1270
AspLEI GCGC 3 cut(s) 324, 2435, 2958
AspS9I GGNCC 2 cut(s) 1253, 2592
AsuHPI GGTGA 9 cut(s) 572, 1016, 1556, 1772, 2546, 2753, 2861, 2937, 3028
AsuII TTCGAA 1 cut(s) 2562
AvaII GGWCC 1 cut(s) 2592
AvrII CCTAGG 1 cut(s) 1270
AxyI CCTNAGG 1 cut(s) 300
BalI TGGCCA 1 cut(s) 1689
BanI GGYRCC 1 cut(s) 2238
BanII GRGCYC 3 cut(s) 116, 729, 1723
BarI GAAGNNNNNNTAC 8 cut(s) 643, 675, 1102, 1134, 1267, 1299, 2160, 2192
Bbv12I GWGCWC 5 cut(s) 8, 116, 729, 1723, 1812
BbvI GCAGC 3 cut(s) 406, 1954, 2337
BccI CCATC 8 cut(s) 518, 817, 1270, 1301, 1489, 1991, 2741, 2840
BceAI ACGGC 1 cut(s) 2787
BciT130I CCWGG 2 cut(s) 1691, 2825
BclI TGATCA 1 cut(s) 52
BcoDI GTCTC 6 cut(s) 320, 348, 866, 1190, 2822, 2930
BcuI ACTAGT 2 cut(s) 992, 1925
BfmI CTRYAG 3 cut(s) 139, 234, 2680
BfuAI ACCTGC 1 cut(s) 1864
BisI GCNGC 4 cut(s) 395, 1018, 1968, 2351
BlnI CCTAGG 1 cut(s) 1270
BlsI GCNGC 4 cut(s) 396, 1019, 1969, 2352
Bme1390I CCNGG 2 cut(s) 1691, 2825
Bme18I GGWCC 1 cut(s) 2592
BmgT120I GGNCC 2 cut(s) 1253, 2592
BmiI GGNNCC 5 cut(s) 220, 508, 1695, 2240, 2617
BmrFI CCNGG 2 cut(s) 1691, 2825
BmrI ACTGGG 1 cut(s) 947
BmsI GCATC 4 cut(s) 1055, 1183, 2576, 2904
BmuI ACTGGG 1 cut(s) 947
BpmI CTGGAG 3 cut(s) 782, 2619, 2846
Bpu14I TTCGAA 1 cut(s) 2562
BpuEI CTTGAG 4 cut(s) 1019, 1709, 2237, 2257
BsaBI GATNNNNATC 2 cut(s) 2031, 3006
BsaHI GRCGYC 1 cut(s) 601
BsaI GGTCTC 2 cut(s) 866, 2930
BsaJI CCNNGG 5 cut(s) 1027, 1270, 1561, 2345, 2775
BsaWI WCCGGW 1 cut(s) 1178
BsaXI ACNNNNNCTCC 2 cut(s) 665, 695
Bsc4I CCNNNNNNNGG 9 cut(s) 38, 236, 360, 1343, 1775, 2589, 2642, 2770, 2797
Bse118I RCCGGY 1 cut(s) 773
Bse1I ACTGG 9 cut(s) 262, 508, 871, 942, 1126, 1230, 1474, 1801, 2764
Bse21I CCTNAGG 1 cut(s) 300
Bse3DI GCAATG 3 cut(s) 1883, 2816, 2875
Bse8I GATNNNNATC 2 cut(s) 2031, 3006
BseBI CCWGG 2 cut(s) 1691, 2825
BseDI CCNNGG 5 cut(s) 1027, 1270, 1561, 2345, 2775
BseGI GGATG 6 cut(s) 510, 1046, 1262, 1312, 2465, 2657
BseJI GATNNNNATC 2 cut(s) 2031, 3006
BseLI CCNNNNNNNGG 9 cut(s) 38, 236, 360, 1343, 1775, 2589, 2642, 2770, 2797
BseMI GCAATG 3 cut(s) 1883, 2816, 2875
BseMII CTCAG 7 cut(s) 314, 466, 719, 1634, 1640, 1818, 2126
BseNI ACTGG 9 cut(s) 262, 508, 871, 942, 1126, 1230, 1474, 1801, 2764
BseRI GAGGAG 1 cut(s) 1047
BseXI GCAGC 3 cut(s) 406, 1954, 2337
BseYI CCCAGC 2 cut(s) 1068, 2603
BsgI GTGCAG 2 cut(s) 1953, 2336
BshFI GGCC 5 cut(s) 960, 1255, 1689, 2725, 2774
BshNI GGYRCC 1 cut(s) 2238
BsiHKAI GWGCWC 5 cut(s) 8, 116, 729, 1723, 1812
BsiSI CCGG 2 cut(s) 774, 1179
BslI CCNNNNNNNGG 9 cut(s) 38, 236, 360, 1343, 1775, 2589, 2642, 2770, 2797
BsmAI GTCTC 6 cut(s) 320, 348, 866, 1190, 2822, 2930
BsmBI CGTCTC 1 cut(s) 320
BsmI GAATGC 4 cut(s) 2219, 2757, 2903, 2958
BsnI GGCC 5 cut(s) 960, 1255, 1689, 2725, 2774
Bso31I GGTCTC 2 cut(s) 866, 2930
Bsp119I TTCGAA 1 cut(s) 2562
Bsp1286I GDGCHC 5 cut(s) 8, 116, 729, 1723, 1812
Bsp143I GATC 6 cut(s) 52, 94, 2256, 2341, 2372, 2482
Bsp19I CCATGG 1 cut(s) 2775
BspACI CCGC 3 cut(s) 777, 1018, 2242
BspANI GGCC 5 cut(s) 960, 1255, 1689, 2725, 2774
BspCNI CTCAG 7 cut(s) 313, 465, 718, 1635, 1639, 1817, 2127
BspHI TCATGA 1 cut(s) 108
BspLI GGNNCC 5 cut(s) 220, 508, 1695, 2240, 2617
BspMAI CTGCAG 1 cut(s) 143
BspMI ACCTGC 1 cut(s) 1864
BspPI GGATC 3 cut(s) 89, 2336, 2380
BspQI GCTCTTC 1 cut(s) 1304
BspT104I TTCGAA 1 cut(s) 2562
BspT107I GGYRCC 1 cut(s) 2238
BspTNI GGTCTC 2 cut(s) 866, 2930
BsrDI GCAATG 3 cut(s) 1883, 2816, 2875
BsrFI RCCGGY 1 cut(s) 773
BsrI ACTGG 9 cut(s) 262, 508, 871, 942, 1126, 1230, 1474, 1801, 2764
BssAI RCCGGY 1 cut(s) 773
BssECI CCNNGG 5 cut(s) 1027, 1270, 1561, 2345, 2775
BssMI GATC 6 cut(s) 52, 94, 2256, 2341, 2372, 2482
BssNAI GTATAC 1 cut(s) 2122
BssNI GRCGYC 1 cut(s) 601
BssT1I CCWWGG 5 cut(s) 1027, 1270, 1561, 2345, 2775
Bst1107I GTATAC 1 cut(s) 2122
Bst2UI CCWGG 2 cut(s) 1691, 2825
Bst4CI ACNGT 6 cut(s) 389, 475, 700, 802, 2792, 2941
Bst6I CTCTTC 5 cut(s) 172, 756, 1304, 1650, 2564
BstACI GRCGYC 1 cut(s) 601
BstBI TTCGAA 1 cut(s) 2562
BstC8I GCNNGC 8 cut(s) 201, 217, 326, 775, 1589, 2269, 2431, 2551
BstDSI CCRYGG 1 cut(s) 2775
BstEII GGTNACC 1 cut(s) 1166
BstENI CCTNNNNNAGG 2 cut(s) 234, 1773
BstF5I GGATG 6 cut(s) 510, 1046, 1262, 1312, 2465, 2657
BstHHI GCGC 3 cut(s) 324, 2435, 2958
BstKTI GATC 6 cut(s) 55, 97, 2259, 2344, 2375, 2485
BstMAI GTCTC 6 cut(s) 320, 348, 866, 1190, 2822, 2930
BstMBI GATC 6 cut(s) 52, 94, 2256, 2341, 2372, 2482
BstMWI GCNNNNNNNGC 2 cut(s) 724, 1052
BstNI CCWGG 2 cut(s) 1691, 2825
BstNSI RCATGY 3 cut(s) 162, 343, 1863
BstPI GGTNACC 1 cut(s) 1166
BstSCI CCNGG 2 cut(s) 1689, 2823
BstSFI CTRYAG 3 cut(s) 139, 234, 2680
BstV1I GCAGC 3 cut(s) 406, 1954, 2337
BstX2I RGATCY 3 cut(s) 94, 2341, 2372
BstYI RGATCY 3 cut(s) 94, 2341, 2372
BstZ17I GTATAC 1 cut(s) 2122
Bsu36I CCTNAGG 1 cut(s) 300
BsuRI GGCC 5 cut(s) 960, 1255, 1689, 2725, 2774
BtgI CCRYGG 1 cut(s) 2775
BtsCI GGATG 6 cut(s) 510, 1046, 1262, 1312, 2465, 2657
BtsI GCAGTG 1 cut(s) 62
BveI ACCTGC 1 cut(s) 1864
Cac8I GCNNGC 8 cut(s) 201, 217, 326, 775, 1589, 2269, 2431, 2551
CaiI CAGNNNCTG 1 cut(s) 800
CciI TCATGA 1 cut(s) 108
CfoI GCGC 3 cut(s) 324, 2435, 2958
Cfr10I RCCGGY 1 cut(s) 773
Cfr13I GGNCC 2 cut(s) 1253, 2592
CseI GACGC 1 cut(s) 590
Csp6I GTAC 2 cut(s) 390, 990
CspCI CAANNNNNGTGG 2 cut(s) 795, 830
CviQI GTAC 2 cut(s) 390, 990
DpnI GATC 6 cut(s) 54, 96, 2258, 2343, 2374, 2484
DpnII GATC 6 cut(s) 52, 94, 2256, 2341, 2372, 2482
DraIII CACNNNGTG 1 cut(s) 2951
EaeI YGGCCR 2 cut(s) 1687, 2772
Eam1104I CTCTTC 5 cut(s) 172, 756, 1304, 1650, 2564
EarI CTCTTC 5 cut(s) 172, 756, 1304, 1650, 2564
Ecl136II GAGCTC 3 cut(s) 114, 727, 1721
Eco130I CCWWGG 5 cut(s) 1027, 1270, 1561, 2345, 2775
Eco24I GRGCYC 3 cut(s) 116, 729, 1723
Eco31I GGTCTC 2 cut(s) 866, 2930
Eco32I GATATC 1 cut(s) 2677
Eco47I GGWCC 1 cut(s) 2592
Eco53kI GAGCTC 3 cut(s) 114, 727, 1721
Eco57I CTGAAG 5 cut(s) 111, 1269, 1506, 2085, 2284
Eco81I CCTNAGG 1 cut(s) 300
Eco91I GGTNACC 1 cut(s) 1166
EcoICRI GAGCTC 3 cut(s) 114, 727, 1721
EcoNI CCTNNNNNAGG 2 cut(s) 234, 1773
EcoO65I GGTNACC 1 cut(s) 1166
EcoRI GAATTC 3 cut(s) 294, 1607, 1836
EcoRII CCWGG 2 cut(s) 1689, 2823
EcoRV GATATC 1 cut(s) 2677
EcoT14I CCWWGG 5 cut(s) 1027, 1270, 1561, 2345, 2775
EcoT22I ATGCAT 1 cut(s) 135
EcoT38I GRGCYC 3 cut(s) 116, 729, 1723
ErhI CCWWGG 5 cut(s) 1027, 1270, 1561, 2345, 2775
Esp3I CGTCTC 1 cut(s) 320
FalI AAGNNNNNCTT 2 cut(s) 2029, 2061
FauNDI CATATG 1 cut(s) 686
FbaI TGATCA 1 cut(s) 52
FblI GTMKAC 2 cut(s) 1615, 2121
Fnu4HI GCNGC 4 cut(s) 395, 1018, 1968, 2351
FokI GGATG 6 cut(s) 497, 1033, 1249, 1319, 2452, 2664
FriOI GRGCYC 3 cut(s) 116, 729, 1723
Fsp4HI GCNGC 4 cut(s) 395, 1018, 1968, 2351
FspI TGCGCA 1 cut(s) 2434
GlaI GCGC 3 cut(s) 323, 2434, 2957
GluI GCNGC 4 cut(s) 395, 1018, 1968, 2351
GsaI CCCAGC 2 cut(s) 1072, 2607
GsuI CTGGAG 3 cut(s) 782, 2619, 2846
HaeIII GGCC 5 cut(s) 960, 1255, 1689, 2725, 2774
HapII CCGG 2 cut(s) 774, 1179
HgaI GACGC 1 cut(s) 590
HhaI GCGC 3 cut(s) 324, 2435, 2958
Hin1I GRCGYC 1 cut(s) 601
Hin6I GCGC 3 cut(s) 322, 2433, 2956
HinP1I GCGC 3 cut(s) 322, 2433, 2956
HincII GTYRAC 3 cut(s) 784, 2067, 2809
HindII GTYRAC 3 cut(s) 784, 2067, 2809
HindIII AAGCTT 2 cut(s) 1205, 2551
HpaII CCGG 2 cut(s) 774, 1179
HphI GGTGA 9 cut(s) 572, 1016, 1556, 1772, 2546, 2753, 2861, 2937, 3028
HpyAV CCTTC 9 cut(s) 240, 364, 669, 888, 1157, 1214, 1769, 2186, 2513
HpyCH4III ACNGT 6 cut(s) 389, 475, 700, 802, 2792, 2941
HpyCH4IV ACGT 4 cut(s) 517, 1972, 2499, 2628
HpyF10VI GCNNNNNNNGC 2 cut(s) 724, 1052
HpySE526I ACGT 4 cut(s) 517, 1972, 2499, 2628
Hsp92I GRCGYC 1 cut(s) 601
HspAI GCGC 3 cut(s) 322, 2433, 2956
KroI GCCGGC 1 cut(s) 773
KroNI GCCGGC 1 cut(s) 775
Ksp22I TGATCA 1 cut(s) 52
Kzo9I GATC 6 cut(s) 52, 94, 2256, 2341, 2372, 2482
LguI GCTCTTC 1 cut(s) 1304
LmnI GCTCC 6 cut(s) 224, 724, 732, 2189, 2826, 2939
Lsp1109I GCAGC 3 cut(s) 406, 1954, 2337
LweI GCATC 4 cut(s) 1055, 1183, 2576, 2904
MaeII ACGT 4 cut(s) 517, 1972, 2499, 2628
MalI GATC 6 cut(s) 54, 96, 2258, 2343, 2374, 2484
MboI GATC 6 cut(s) 52, 94, 2256, 2341, 2372, 2482
MflI RGATCY 3 cut(s) 94, 2341, 2372
MhlI GDGCHC 5 cut(s) 8, 116, 729, 1723, 1812
MlsI TGGCCA 1 cut(s) 1689
MluNI TGGCCA 1 cut(s) 1689
MlyI GAGTC 1 cut(s) 189
MmeI TCCRAC 6 cut(s) 125, 395, 470, 500, 1641, 2570
Mox20I TGGCCA 1 cut(s) 1689
Mph1103I ATGCAT 1 cut(s) 135
MroNI GCCGGC 1 cut(s) 773
MroXI GAANNNNTTC 3 cut(s) 1783, 1848, 2058
MscI TGGCCA 1 cut(s) 1689
MseI TTAA 8 cut(s) 470, 908, 1425, 1922, 1940, 2163, 2171, 2409
MslI CAYNNNNRTG 3 cut(s) 2532, 2774, 2963
Msp20I TGGCCA 1 cut(s) 1689
MspA1I CMGCKG 2 cut(s) 397, 2603
MspI CCGG 2 cut(s) 774, 1179
MspR9I CCNGG 2 cut(s) 1691, 2825
Mva1269I GAATGC 4 cut(s) 2219, 2757, 2903, 2958
MvaI CCWGG 2 cut(s) 1691, 2825
MwoI GCNNNNNNNGC 2 cut(s) 724, 1052
NaeI GCCGGC 1 cut(s) 775
NcoI CCATGG 1 cut(s) 2775
NdeI CATATG 1 cut(s) 686
NdeII GATC 6 cut(s) 52, 94, 2256, 2341, 2372, 2482
NgoMIV GCCGGC 1 cut(s) 773
NlaIV GGNNCC 5 cut(s) 220, 508, 1695, 2240, 2617
NmuCI GTSAC 5 cut(s) 154, 184, 1288, 2534, 3034
NsbI TGCGCA 1 cut(s) 2434
NsiI ATGCAT 1 cut(s) 135
NspI RCATGY 3 cut(s) 162, 343, 1863
NspV TTCGAA 1 cut(s) 2562
PagI TCATGA 1 cut(s) 108
PciI ACATGT 1 cut(s) 339
PciSI GCTCTTC 1 cut(s) 1304
PcsI WCGNNNNNNNCGW 1 cut(s) 2505
PctI GAATGC 4 cut(s) 2219, 2757, 2903, 2958
PdiI GCCGGC 1 cut(s) 775
PdmI GAANNNNTTC 3 cut(s) 1783, 1848, 2058
PflFI GACNNNGTC 2 cut(s) 1450, 2596
PflMI CCANNNNNTGG 3 cut(s) 38, 1343, 2642
PfoI TCCNGGA 1 cut(s) 2823
PkrI GCNGC 4 cut(s) 396, 1019, 1969, 2352
PleI GAGTC 1 cut(s) 188
PpsI GAGTC 1 cut(s) 188
PscI ACATGT 1 cut(s) 339
Psp124BI GAGCTC 3 cut(s) 116, 729, 1723
Psp6I CCWGG 2 cut(s) 1689, 2823
PspEI GGTNACC 1 cut(s) 1166
PspFI CCCAGC 2 cut(s) 1068, 2603
PspGI CCWGG 2 cut(s) 1689, 2823
PspN4I GGNNCC 5 cut(s) 220, 508, 1695, 2240, 2617
PspPI GGNCC 2 cut(s) 1253, 2592
PsrI GAACNNNNNNTAC 2 cut(s) 2613, 2645
PstI CTGCAG 1 cut(s) 143
PstNI CAGNNNCTG 1 cut(s) 800
PsuI RGATCY 3 cut(s) 94, 2341, 2372
PsyI GACNNNGTC 2 cut(s) 1450, 2596
PvuII CAGCTG 2 cut(s) 397, 2603
RsaI GTAC 2 cut(s) 391, 991
RsaNI GTAC 2 cut(s) 390, 990
RseI CAYNNNNRTG 3 cut(s) 2532, 2774, 2963
SacI GAGCTC 3 cut(s) 116, 729, 1723
SapI GCTCTTC 1 cut(s) 1304
SaqAI TTAA 8 cut(s) 470, 908, 1425, 1922, 1940, 2163, 2171, 2409
SatI GCNGC 4 cut(s) 395, 1018, 1968, 2351
Sau3AI GATC 6 cut(s) 52, 94, 2256, 2341, 2372, 2482
Sau96I GGNCC 2 cut(s) 1253, 2592
SchI GAGTC 1 cut(s) 189
ScrFI CCNGG 2 cut(s) 1691, 2825
SduI GDGCHC 5 cut(s) 8, 116, 729, 1723, 1812
SfaNI GCATC 4 cut(s) 1055, 1183, 2576, 2904
SfcI CTRYAG 3 cut(s) 139, 234, 2680
SfuI TTCGAA 1 cut(s) 2562
SinI GGWCC 1 cut(s) 2592
SmiMI CAYNNNNRTG 3 cut(s) 2532, 2774, 2963
SmlI CTYRAG 4 cut(s) 998, 1724, 2252, 2272
SmoI CTYRAG 4 cut(s) 998, 1724, 2252, 2272
SpeI ACTAGT 2 cut(s) 992, 1925
SsiI CCGC 3 cut(s) 777, 1018, 2242
SspI AATATT 1 cut(s) 2413
SstI GAGCTC 3 cut(s) 116, 729, 1723
StyD4I CCNGG 2 cut(s) 1689, 2823
StyI CCWWGG 5 cut(s) 1027, 1270, 1561, 2345, 2775
TaaI ACNGT 6 cut(s) 389, 475, 700, 802, 2792, 2941
TaiI ACGT 4 cut(s) 520, 1975, 2502, 2631
TaqI TCGA 6 cut(s) 665, 1436, 1717, 1991, 2508, 2562
TaqII GACCGA 1 cut(s) 2052
TatI WGTACW 1 cut(s) 989
TauI GCSGC 1 cut(s) 1020
Tru1I TTAA 8 cut(s) 470, 908, 1425, 1922, 1940, 2163, 2171, 2409
Tru9I TTAA 8 cut(s) 470, 908, 1425, 1922, 1940, 2163, 2171, 2409
TseFI GTSAC 5 cut(s) 154, 184, 1288, 2534, 3034
TseI GCWGC 3 cut(s) 394, 1967, 2350
Tsp45I GTSAC 5 cut(s) 154, 184, 1288, 2534, 3034
TspGWI ACGGA 3 cut(s) 2385, 2608, 2744
Tth111I GACNNNGTC 2 cut(s) 1450, 2596
Van91I CCANNNNNTGG 3 cut(s) 38, 1343, 2642
VpaK11BI GGWCC 1 cut(s) 2592
XagI CCTNNNNNAGG 2 cut(s) 234, 1773
XapI RAATTY 9 cut(s) 294, 366, 788, 964, 1077, 1096, 1607, 1700, 1836
XbaI TCTAGA 3 cut(s) 13, 827, 2338
XceI RCATGY 3 cut(s) 162, 343, 1863
XmaJI CCTAGG 1 cut(s) 1270
XmiI GTMKAC 2 cut(s) 1615, 2121
XmnI GAANNNNTTC 3 cut(s) 1783, 1848, 2058
Zsp2I ATGCAT 1 cut(s) 135
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.