MD14G1109500.v1.1

BTB POZ domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0013310
Physical Location & Seq
Forward (+)
17295955 .. 17298969
3015 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1109500.v1.1.491

Sequence Viewer

Length: 1959 bp
ATGGCAGCTGCGGCAACCACAACGACAACTACTCGTAGTACTAACATTACGCAGTTCAATTCCCACACAACCCCCTCCAAAACCAAAACCAAACGCCGTAGGCACCGCGAATCCACCACCCTATCTTCCCAAACCGCCGCCGCAGCACCCAACCCGTCTCGAAAACTCGGCCCGCCCACCATTGTCTCCCCCGATAACTCCTGGTGCTGTTTCGCCTCGAAAGACTCGAAACCCATCTCCGCCCAGCCACACCCGGAGCAACCCATTAACCCGGATCGTAAACCCGATCCGGTTCAGTATTACCCATCTGGGAAATCGCCTTCTTCTTCGCCGTCCTCGTTCCGGATCCGATTCGCGCCGGGTAGTCGCTCTCCGGTCATGGATTTTAGTCCGGCGTTGACAAATGGCCATTCTGGTCAAAACGATTCGTTTAATTCCAGCTTCAGCAGGTTCAATTCAATGCTCACGGCTGGGTTATTGAACCCCATGTCTCCGCCGCCGCAATCCGACAAGACGACCCGGTCCAGCCCGACCCTTTTCGAAATGATGGCTAGCGAGCCCGAAATGGCCCAACCCAGAGCCCAGATCCACCAGAACGGCGTCGGGTCGGCAAGCGGGCGCAAAACCCATGTGGGTTTGGTTCAGGACAAGCAGGCGTTGATGATGCAGCGGGTCTCACATCTTCTGATGGGGAATCGGAGCCCCAGGAACCAGTTCAATGACCCGTCGAGCAGTGACATTAAGCTCACTCTGAGCTCCAAAGATGGGTTCAGTGTGTCGATGAGTGTACACCGTCAGATTCTGGTCGCGCACAGTCGGTTCTTCGCGGTGAAGCTGTCGGAGAGGTGGGTCAAGCAGCAGAGAACGGCGCCGTCGTCGTCTCCGCCGTACAATGTGGAGATTGCGGATTGTGATGACGTGGAGGTTTATATCGAGGCCTTGATGTTGATGTACTGTAAGGATCTGAGGAGAAGGCTGATGAAGGAGTGTGTCCCCAAAGTGCTTGGAATTTTGAAGGTTTCGGCAGCAATTGGATTCGATGCCGGTGTTTTATCTTGTTTAGAATACTTAGAAGCTGCCCCATGGGCTGAGGATGAAGAGGAGAAGGTGGCATCACTGATGTTTGAGCTTCACCTTGAAGGCGTTGGAGCTGGGGAAGTACTCAAGAGGGTCTCTGTCGAAGTTGCCAATGGGACTGAAGTGGGTAATGACAACGAAGAAGTTCTTATAAAGCTTCTGCATGTGGTTCTTGAAGGCAAAGACGAAAAGGCAAGGCGCGAGATGAAAGGATTGGTGTTGAAGATGCTTCGTGAGAATTCATCTCATAATGATCTCCGGAAAGAGTCCTTGTACTCGGCTTGTGATGGGTGTTTGCAATTGCTTCGCCGCCATTTTTCTCGGGCAGCAGAGTCAGACTTGCAAGATGTGGGTCAGATTGCGAGGCAAGCAGATAATTTGCATTGGATTTTGGATATTTTGATTGACAGACAAATGGCTGAAGATTTCTTGACAACATGGGCATCCCAAACTGAATTGTCTGAGGTGCATTCTAAAGTGGCTGCAGTTCATAGATACGAGATTAGCAGAGTTACTGCTCGTCTCTTTGTCGGGCTGGGAAAGGGGCAGCTATTGGTTTCCAAGGATGTGAGGTTCTTGCTTTTGCGTACATGGTTGGTCCCATTTTACGATGATTTTGCCTGGATGAAAAGGGCTTCGAAAGGCCTGGATAGGCACTCAATTGAGGATGGTCTAAGCAACACAATCCTGACCCTGCCATTAGCATGGCAGCAAGAAATTTTGCTGGCTTGGTTTAATCGGTTCTTGAACTCAGGTGAAGATTGCCCCAATATACAAAGAGGATTTGAAGTTTGGTGGAGGAGGGCCTTTTGGAAGCGGAATGGTGACCAGGAAAGACCACGGCCGTTACGAATTACAACCGCAACCATTGAAAACTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB

Protein Analysis

653

Amino Acids

73.1

Weight (kDa)

8.97

Isoelectric Point (pI)

60.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB-POZ_ANK-like PF25553 406 - 630 1.7e-62 BTB/POZ Ankyrin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013310)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G63850
fragaria_vesca FvH4_5g02930 FvH4_5g02930
malus_domestica MD06G1088400.v1.1 MD14G1109500.v1.1
prunus_persica Prupe.5G104400_v2.0.a1
pyrus_communis pycom06g08440 pycom14g10360
rosa_chinensis RchiOBHm_Chr7g0196961
rosa_laevigata RLG00000003977
rosa_multiflora Rmu_sc0001083.1_g000006
rosa_roxburghii Rroxscaffold_3G00258800
rosa_rugosa Rorug07G0037000
rosa_samantha Rh7AG161400 Rh7BG163600 Rh7CG169600 Rh7DG162900
rosa_wichuraiana Rw7G014120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1229
AasI GACNNNNNNGTC 1 cut(s) 520
Acc36I ACCTGC 1 cut(s) 438
AccB1I GGYRCC 2 cut(s) 102, 868
AccII CGCG 5 cut(s) 108, 356, 809, 827, 1278
AccIII TCCGGA 2 cut(s) 342, 1335
AclWI GGATC 6 cut(s) 281, 282, 340, 353, 580, 969
AcoI YGGCCR 2 cut(s) 406, 1919
AcsI RAATTY 3 cut(s) 1008, 1315, 1794
AcuI CTGAAG 3 cut(s) 427, 1218, 1518
AcyI GRCGYC 2 cut(s) 600, 869
AfaI GTAC 7 cut(s) 40, 789, 890, 953, 1161, 1352, 1666
AfiI CCNNNNNNNGG 2 cut(s) 342, 765
AjiI CACGTC 1 cut(s) 919
AjnI CCWGG 5 cut(s) 200, 704, 1697, 1722, 1905
AjuI GAANNNNNNNTTGG 2 cut(s) 752, 784
AloI GAACNNNNNNTCC 2 cut(s) 1634, 1666
Alw21I GWGCWC 1 cut(s) 758
Alw26I GTCTC 7 cut(s) 162, 190, 495, 679, 885, 1177, 1604
AlwI GGATC 6 cut(s) 281, 282, 340, 353, 580, 969
AlwNI CAGNNNCTG 1 cut(s) 802
Ama87I CYCGRG 1 cut(s) 1398
Aor13HI TCCGGA 2 cut(s) 342, 1335
AoxI GGCC 7 cut(s) 169, 406, 567, 936, 1720, 1881, 1919
ApoI RAATTY 3 cut(s) 1008, 1315, 1794
Asp700I GAANNNNTTC 2 cut(s) 713, 1221
AspLEI GCGC 5 cut(s) 358, 621, 811, 871, 1278
AspS9I GGNCC 5 cut(s) 170, 522, 568, 1675, 1881
AsuC2I CCSGG 4 cut(s) 254, 272, 360, 520
AsuHPI GGTGA 4 cut(s) 841, 1124, 1844, 1913
AsuII TTCGAA 2 cut(s) 540, 1715
AsuNHI GCTAGC 1 cut(s) 551
AvaI CYCGRG 1 cut(s) 1398
AvaII GGWCC 2 cut(s) 522, 1675
BalI TGGCCA 1 cut(s) 408
BamHI GGATCC 1 cut(s) 345
BanI GGYRCC 2 cut(s) 102, 868
BanII GRGCYC 4 cut(s) 561, 583, 704, 758
Bbv12I GWGCWC 1 cut(s) 758
BbvCI CCTCAGC 1 cut(s) 1089
BccI CCATC 7 cut(s) 242, 313, 541, 682, 758, 1358, 1739
BceAI ACGGC 9 cut(s) 81, 316, 483, 613, 856, 871, 882, 1906, 1934
BcgI CGANNNNNNTGC 4 cut(s) 1364, 1398, 1676, 1710
BciT130I CCWGG 5 cut(s) 202, 706, 1699, 1724, 1907
BcnI CCSGG 4 cut(s) 254, 272, 360, 520
BcoDI GTCTC 7 cut(s) 162, 190, 495, 679, 885, 1177, 1604
BfaI CTAG 1 cut(s) 552
BfmI CTRYAG 1 cut(s) 1560
BfoI RGCGCY 1 cut(s) 872
BfuAI ACCTGC 1 cut(s) 438
BglI GCCNNNNNGGC 1 cut(s) 1085
BmcAI AGTACT 2 cut(s) 40, 1161
Bme1390I CCNGG 9 cut(s) 202, 254, 272, 360, 520, 706, 1699, 1724, 1907
Bme18I GGWCC 2 cut(s) 522, 1675
BmeT110I CYCGRG 1 cut(s) 1398
BmgBI CACGTC 1 cut(s) 919
BmgT120I GGNCC 5 cut(s) 170, 522, 568, 1675, 1881
BmiI GGNNCC 6 cut(s) 104, 347, 701, 710, 870, 1677
BmrFI CCNGG 9 cut(s) 202, 254, 272, 360, 520, 706, 1699, 1724, 1907
BmsI GCATC 5 cut(s) 654, 1030, 1121, 1293, 1529
BmtI GCTAGC 1 cut(s) 555
Bpu10I CCTNAGC 1 cut(s) 1089
Bpu14I TTCGAA 2 cut(s) 540, 1715
BpuEI CTTGAG 1 cut(s) 1148
BpuMI CCSGG 4 cut(s) 254, 272, 360, 520
BsaHI GRCGYC 2 cut(s) 600, 869
BsaI GGTCTC 2 cut(s) 679, 1177
BsaJI CCNNGG 4 cut(s) 704, 1082, 1638, 1916
BsaWI WCCGGW 4 cut(s) 289, 342, 373, 1335
Bsc4I CCNNNNNNNGG 2 cut(s) 342, 765
Bse118I RCCGGY 1 cut(s) 1043
Bse1I ACTGG 1 cut(s) 712
BseAI TCCGGA 2 cut(s) 342, 1335
BseBI CCWGG 5 cut(s) 202, 706, 1699, 1724, 1907
BseDI CCNNGG 4 cut(s) 704, 1082, 1638, 1916
BseGI GGATG 5 cut(s) 1099, 1520, 1648, 1707, 1750
BseLI CCNNNNNNNGG 2 cut(s) 342, 765
BseMII CTCAG 5 cut(s) 743, 956, 1080, 1530, 1842
BseNI ACTGG 1 cut(s) 712
BseRI GAGGAG 3 cut(s) 982, 1115, 1891
BseX3I CGGCCG 1 cut(s) 1919
BseYI CCCAGC 4 cut(s) 243, 470, 1151, 1612
Bsh1236I CGCG 5 cut(s) 108, 356, 809, 827, 1278
Bsh1285I CGRYCG 1 cut(s) 1922
BshFI GGCC 7 cut(s) 171, 408, 569, 938, 1722, 1883, 1921
BshNI GGYRCC 2 cut(s) 102, 868
BsiEI CGRYCG 1 cut(s) 1922
BsiHKAI GWGCWC 1 cut(s) 758
BsiHKCI CYCGRG 1 cut(s) 1398
BslFI GGGAC 3 cut(s) 977, 1207, 1661
BslI CCNNNNNNNGG 2 cut(s) 342, 765
BsmAI GTCTC 7 cut(s) 162, 190, 495, 679, 885, 1177, 1604
BsmBI CGTCTC 3 cut(s) 162, 885, 1604
BsmFI GGGAC 3 cut(s) 977, 1207, 1661
BsmI GAATGC 1 cut(s) 1546
BsnI GGCC 7 cut(s) 171, 408, 569, 938, 1722, 1883, 1921
Bso31I GGTCTC 2 cut(s) 679, 1177
BsoBI CYCGRG 1 cut(s) 1398
Bsp119I TTCGAA 2 cut(s) 540, 1715
Bsp1286I GDGCHC 4 cut(s) 561, 583, 704, 758
Bsp13I TCCGGA 2 cut(s) 342, 1335
Bsp1407I TGTACA 1 cut(s) 787
Bsp143I GATC 6 cut(s) 274, 286, 345, 585, 961, 1330
Bsp19I CCATGG 1 cut(s) 1082
BspANI GGCC 7 cut(s) 171, 408, 569, 938, 1722, 1883, 1921
BspCNI CTCAG 5 cut(s) 744, 957, 1081, 1531, 1841
BspEI TCCGGA 2 cut(s) 342, 1335
BspFNI CGCG 5 cut(s) 108, 356, 809, 827, 1278
BspLI GGNNCC 6 cut(s) 104, 347, 701, 710, 870, 1677
BspMAI CTGCAG 1 cut(s) 1564
BspMI ACCTGC 1 cut(s) 438
BspOI GCTAGC 1 cut(s) 555
BspPI GGATC 6 cut(s) 281, 282, 340, 353, 580, 969
BspT104I TTCGAA 2 cut(s) 540, 1715
BspT107I GGYRCC 2 cut(s) 102, 868
BspTNI GGTCTC 2 cut(s) 679, 1177
BsrFI RCCGGY 1 cut(s) 1043
BsrGI TGTACA 1 cut(s) 787
BsrI ACTGG 1 cut(s) 712
BssAI RCCGGY 1 cut(s) 1043
BssECI CCNNGG 4 cut(s) 704, 1082, 1638, 1916
BssMI GATC 6 cut(s) 274, 286, 345, 585, 961, 1330
BssNI GRCGYC 2 cut(s) 600, 869
BssT1I CCWWGG 2 cut(s) 1082, 1638
Bst2UI CCWGG 5 cut(s) 202, 706, 1699, 1724, 1907
Bst4CI ACNGT 3 cut(s) 794, 815, 956
Bst6I CTCTTC 1 cut(s) 1092
BstACI GRCGYC 2 cut(s) 600, 869
BstAUI TGTACA 1 cut(s) 787
BstBI TTCGAA 2 cut(s) 540, 1715
BstC8I GCNNGC 8 cut(s) 173, 553, 557, 613, 617, 654, 1446, 1803
BstDEI CTNAG 7 cut(s) 752, 965, 1069, 1089, 1539, 1751, 1828
BstDSI CCRYGG 2 cut(s) 1082, 1916
BstEII GGTNACC 1 cut(s) 1901
BstF5I GGATG 5 cut(s) 1099, 1520, 1648, 1707, 1750
BstFNI CGCG 5 cut(s) 108, 356, 809, 827, 1278
BstH2I RGCGCY 1 cut(s) 872
BstHHI GCGC 5 cut(s) 358, 621, 811, 871, 1278
BstKTI GATC 6 cut(s) 277, 289, 348, 588, 964, 1333
BstMAI GTCTC 7 cut(s) 162, 190, 495, 679, 885, 1177, 1604
BstMBI GATC 6 cut(s) 274, 286, 345, 585, 961, 1330
BstMCI CGRYCG 1 cut(s) 1922
BstMWI GCNNNNNNNGC 4 cut(s) 11, 143, 1085, 1445
BstNI CCWGG 5 cut(s) 202, 706, 1699, 1724, 1907
BstNSI RCATGY 1 cut(s) 1244
BstPI GGTNACC 1 cut(s) 1901
BstSCI CCNGG 9 cut(s) 200, 252, 270, 358, 518, 704, 1697, 1722, 1905
BstSFI CTRYAG 1 cut(s) 1560
BstUI CGCG 5 cut(s) 108, 356, 809, 827, 1278
BstX2I RGATCY 3 cut(s) 345, 585, 961
BstXI CCANNNNNNTGG 1 cut(s) 1782
BstYI RGATCY 3 cut(s) 345, 585, 961
BstZI CGGCCG 1 cut(s) 1919
BsuRI GGCC 7 cut(s) 171, 408, 569, 938, 1722, 1883, 1921
BtgI CCRYGG 2 cut(s) 1082, 1916
BtrI CACGTC 1 cut(s) 919
BtsCI GGATG 5 cut(s) 1099, 1520, 1648, 1707, 1750
BtsI GCAGTG 1 cut(s) 739
BtsIMutI CAGTG 3 cut(s) 739, 778, 1115
BveI ACCTGC 1 cut(s) 438
Cac8I GCNNGC 8 cut(s) 173, 553, 557, 613, 617, 654, 1446, 1803
CaiI CAGNNNCTG 1 cut(s) 802
CfoI GCGC 5 cut(s) 358, 621, 811, 871, 1278
Cfr10I RCCGGY 1 cut(s) 1043
Cfr13I GGNCC 5 cut(s) 170, 522, 568, 1675, 1881
CseI GACGC 1 cut(s) 589
Csp6I GTAC 7 cut(s) 39, 788, 889, 952, 1160, 1351, 1665
CviAII CATG 8 cut(s) 379, 487, 629, 1083, 1241, 1515, 1668, 1782
CviQI GTAC 7 cut(s) 39, 788, 889, 952, 1160, 1351, 1665
DdeI CTNAG 7 cut(s) 752, 965, 1069, 1089, 1539, 1751, 1828
DinI GGCGCC 1 cut(s) 870
DpnI GATC 6 cut(s) 276, 288, 347, 587, 963, 1332
DpnII GATC 6 cut(s) 274, 286, 345, 585, 961, 1330
DrdI GACNNNNNNGTC 1 cut(s) 520
DseDI GACNNNNNNGTC 1 cut(s) 520
EaeI YGGCCR 2 cut(s) 406, 1919
EagI CGGCCG 1 cut(s) 1919
Eam1104I CTCTTC 1 cut(s) 1092
EarI CTCTTC 1 cut(s) 1092
EciI GGCGGA 3 cut(s) 229, 483, 873
Ecl136II GAGCTC 1 cut(s) 756
EclXI CGGCCG 1 cut(s) 1919
Eco130I CCWWGG 2 cut(s) 1082, 1638
Eco147I AGGCCT 2 cut(s) 938, 1722
Eco24I GRGCYC 4 cut(s) 561, 583, 704, 758
Eco31I GGTCTC 2 cut(s) 679, 1177
Eco47I GGWCC 2 cut(s) 522, 1675
Eco52I CGGCCG 1 cut(s) 1919
Eco53kI GAGCTC 1 cut(s) 756
Eco57I CTGAAG 3 cut(s) 427, 1218, 1518
Eco88I CYCGRG 1 cut(s) 1398
Eco91I GGTNACC 1 cut(s) 1901
EcoICRI GAGCTC 1 cut(s) 756
EcoO109I RGGNCCY 1 cut(s) 1881
EcoO65I GGTNACC 1 cut(s) 1901
EcoRI GAATTC 1 cut(s) 1315
EcoRII CCWGG 5 cut(s) 200, 704, 1697, 1722, 1905
EcoT14I CCWWGG 2 cut(s) 1082, 1638
EcoT38I GRGCYC 4 cut(s) 561, 583, 704, 758
EgeI GGCGCC 1 cut(s) 870
EheI GGCGCC 1 cut(s) 870
ErhI CCWWGG 2 cut(s) 1082, 1638
Esp3I CGTCTC 3 cut(s) 162, 885, 1604
FaeI CATG 8 cut(s) 382, 490, 632, 1086, 1244, 1518, 1671, 1785
FalI AAGNNNNNCTT 2 cut(s) 1209, 1241
FaqI GGGAC 3 cut(s) 977, 1207, 1661
FatI CATG 8 cut(s) 378, 486, 628, 1082, 1240, 1514, 1667, 1781
FauI CCCGC 3 cut(s) 180, 608, 663
FokI GGATG 5 cut(s) 1106, 1507, 1655, 1714, 1757
FriOI GRGCYC 4 cut(s) 561, 583, 704, 758
FspBI CTAG 1 cut(s) 552
GlaI GCGC 5 cut(s) 357, 620, 810, 870, 1277
GsaI CCCAGC 4 cut(s) 247, 474, 1155, 1616
HaeII RGCGCY 1 cut(s) 872
HaeIII GGCC 7 cut(s) 171, 408, 569, 938, 1722, 1883, 1921
HgaI GACGC 1 cut(s) 589
HhaI GCGC 5 cut(s) 358, 621, 811, 871, 1278
Hin1I GRCGYC 2 cut(s) 600, 869
Hin1II CATG 8 cut(s) 382, 490, 632, 1086, 1244, 1518, 1671, 1785
Hin6I GCGC 5 cut(s) 356, 619, 809, 869, 1276
HinP1I GCGC 5 cut(s) 356, 619, 809, 869, 1276
HincII GTYRAC 1 cut(s) 399
HindII GTYRAC 1 cut(s) 399
HindIII AAGCTT 1 cut(s) 1232
HinfI GANTC 9 cut(s) 110, 224, 351, 425, 694, 799, 1035, 1343, 1409
HphI GGTGA 4 cut(s) 841, 1124, 1844, 1913
Hpy166II GTNNAC 4 cut(s) 281, 399, 788, 790
Hpy8I GTNNAC 4 cut(s) 281, 399, 788, 790
Hpy99I CGWCG 4 cut(s) 605, 730, 877, 880
HpyAV CCTTC 7 cut(s) 330, 966, 976, 1009, 1099, 1133, 1247
HpyCH4III ACNGT 3 cut(s) 794, 815, 956
HpyCH4IV ACGT 1 cut(s) 918
HpyCH4V TGCA 7 cut(s) 667, 1240, 1375, 1420, 1459, 1546, 1562
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 143, 1085, 1445
HpyF3I CTNAG 7 cut(s) 752, 965, 1069, 1089, 1539, 1751, 1828
HpySE526I ACGT 1 cut(s) 918
Hsp92I GRCGYC 2 cut(s) 600, 869
Hsp92II CATG 8 cut(s) 382, 490, 632, 1086, 1244, 1518, 1671, 1785
HspAI GCGC 5 cut(s) 356, 619, 809, 869, 1276
KasI GGCGCC 1 cut(s) 868
Kpn2I TCCGGA 2 cut(s) 342, 1335
Kzo9I GATC 6 cut(s) 274, 286, 345, 585, 961, 1330
LmnI GCTCC 4 cut(s) 256, 699, 761, 1148
LweI GCATC 5 cut(s) 654, 1030, 1121, 1293, 1529
MaeI CTAG 1 cut(s) 552
MaeII ACGT 1 cut(s) 918
MaeIII GTNAC 4 cut(s) 734, 1588, 1901, 1923
MalI GATC 6 cut(s) 276, 288, 347, 587, 963, 1332
MboI GATC 6 cut(s) 274, 286, 345, 585, 961, 1330
MfeI CAATTG 3 cut(s) 1029, 1376, 1737
MflI RGATCY 3 cut(s) 345, 585, 961
MhlI GDGCHC 4 cut(s) 561, 583, 704, 758
MlsI TGGCCA 1 cut(s) 408
MluNI TGGCCA 1 cut(s) 408
Mly113I GGCGCC 1 cut(s) 869
MlyI GAGTC 3 cut(s) 218, 1352, 1418
MmeI TCCRAC 3 cut(s) 531, 819, 1126
Mox20I TGGCCA 1 cut(s) 408
MroI TCCGGA 2 cut(s) 342, 1335
MroXI GAANNNNTTC 2 cut(s) 713, 1221
MscI TGGCCA 1 cut(s) 408
MseI TTAA 4 cut(s) 267, 432, 741, 1812
MslI CAYNNNNRTG 1 cut(s) 1780
Msp20I TGGCCA 1 cut(s) 408
MspA1I CMGCKG 2 cut(s) 8, 670
MspR9I CCNGG 9 cut(s) 202, 254, 272, 360, 520, 706, 1699, 1724, 1907
MunI CAATTG 3 cut(s) 1029, 1376, 1737
Mva1269I GAATGC 1 cut(s) 1546
MvaI CCWGG 5 cut(s) 202, 706, 1699, 1724, 1907
MvnI CGCG 5 cut(s) 108, 356, 809, 827, 1278
MwoI GCNNNNNNNGC 4 cut(s) 11, 143, 1085, 1445
NarI GGCGCC 1 cut(s) 869
NciI CCSGG 4 cut(s) 254, 272, 360, 520
NcoI CCATGG 1 cut(s) 1082
NdeII GATC 6 cut(s) 274, 286, 345, 585, 961, 1330
NheI GCTAGC 1 cut(s) 551
NlaIII CATG 8 cut(s) 382, 490, 632, 1086, 1244, 1518, 1671, 1785
NlaIV GGNNCC 6 cut(s) 104, 347, 701, 710, 870, 1677
NmeAIII GCCGAG 2 cut(s) 147, 1334
NmuCI GTSAC 2 cut(s) 734, 1901
NspI RCATGY 1 cut(s) 1244
NspV TTCGAA 2 cut(s) 540, 1715
PceI AGGCCT 2 cut(s) 938, 1722
PcsI WCGNNNNNNNCGW 5 cut(s) 224, 335, 872, 884, 1924
PctI GAATGC 1 cut(s) 1546
PdmI GAANNNNTTC 2 cut(s) 713, 1221
PfeI GAWTC 6 cut(s) 110, 351, 425, 694, 799, 1035
PflFI GACNNNGTC 1 cut(s) 520
PleI GAGTC 3 cut(s) 218, 1351, 1417
PluTI GGCGCC 1 cut(s) 872
PpsI GAGTC 3 cut(s) 218, 1351, 1417
PsiI TTATAA 1 cut(s) 1229
Psp124BI GAGCTC 1 cut(s) 758
Psp6I CCWGG 5 cut(s) 200, 704, 1697, 1722, 1905
PspEI GGTNACC 1 cut(s) 1901
PspFI CCCAGC 4 cut(s) 243, 470, 1151, 1612
PspGI CCWGG 5 cut(s) 200, 704, 1697, 1722, 1905
PspN4I GGNNCC 6 cut(s) 104, 347, 701, 710, 870, 1677
PspPI GGNCC 5 cut(s) 170, 522, 568, 1675, 1881
PstI CTGCAG 1 cut(s) 1564
PstNI CAGNNNCTG 1 cut(s) 802
PsuI RGATCY 3 cut(s) 345, 585, 961
PsyI GACNNNGTC 1 cut(s) 520
PvuII CAGCTG 1 cut(s) 8
RsaI GTAC 7 cut(s) 40, 789, 890, 953, 1161, 1352, 1666
RsaNI GTAC 7 cut(s) 39, 788, 889, 952, 1160, 1351, 1665
RseI CAYNNNNRTG 1 cut(s) 1780
SacI GAGCTC 1 cut(s) 758
SaqAI TTAA 4 cut(s) 267, 432, 741, 1812
Sau3AI GATC 6 cut(s) 274, 286, 345, 585, 961, 1330
Sau96I GGNCC 5 cut(s) 170, 522, 568, 1675, 1881
ScaI AGTACT 2 cut(s) 40, 1161
SchI GAGTC 3 cut(s) 218, 1352, 1418
ScrFI CCNGG 9 cut(s) 202, 254, 272, 360, 520, 706, 1699, 1724, 1907
SduI GDGCHC 4 cut(s) 561, 583, 704, 758
SfaNI GCATC 5 cut(s) 654, 1030, 1121, 1293, 1529
SfcI CTRYAG 1 cut(s) 1560
SfoI GGCGCC 1 cut(s) 870
SfuI TTCGAA 2 cut(s) 540, 1715
SinI GGWCC 2 cut(s) 522, 1675
SmiMI CAYNNNNRTG 1 cut(s) 1780
SmlI CTYRAG 1 cut(s) 1163
SmoI CTYRAG 1 cut(s) 1163
SseBI AGGCCT 2 cut(s) 938, 1722
SspDI GGCGCC 1 cut(s) 868
SspMI CTAG 1 cut(s) 552
SstI GAGCTC 1 cut(s) 758
StuI AGGCCT 2 cut(s) 938, 1722
StyD4I CCNGG 9 cut(s) 200, 252, 270, 358, 518, 704, 1697, 1722, 1905
StyI CCWWGG 2 cut(s) 1082, 1638
TaaI ACNGT 3 cut(s) 794, 815, 956
TaiI ACGT 1 cut(s) 921
TatI WGTACW 5 cut(s) 38, 787, 951, 1159, 1350
TauI GCSGC 6 cut(s) 14, 140, 143, 499, 502, 1389
TfiI GAWTC 6 cut(s) 110, 351, 425, 694, 799, 1035
Tru1I TTAA 4 cut(s) 267, 432, 741, 1812
Tru9I TTAA 4 cut(s) 267, 432, 741, 1812
TscAI CASTG 3 cut(s) 739, 778, 1122
TseFI GTSAC 2 cut(s) 734, 1901
Tsp45I GTSAC 2 cut(s) 734, 1901
TspDTI ATGAA 6 cut(s) 995, 1110, 1298, 1308, 1556, 1718
TspRI CASTG 3 cut(s) 739, 778, 1122
Tth111I GACNNNGTC 1 cut(s) 520
VpaK11BI GGWCC 2 cut(s) 522, 1675
XapI RAATTY 3 cut(s) 1008, 1315, 1794
XceI RCATGY 1 cut(s) 1244
XmnI GAANNNNTTC 2 cut(s) 713, 1221
XspI CTAG 1 cut(s) 552
ZrmI AGTACT 2 cut(s) 40, 1161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.