Rh7DG162900

BTB POZ domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0013310
Physical Location & Seq
Reverse (-)
14508764 .. 14513287
4524 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG162900.1

Sequence Viewer

Length: 1854 bp
ATGGCAACAGCCACATCTACTAGTACTACTGCTGCTGCTGCTGCTCTCAAAGCTCACCCCCATCAACAACCACCCACCAAACCCAGACGCCGCAACAACAACAACAACCCGACCCGGAAGCTCGACCCGCCGACGATTGTCTCCCCCGAGAACTCCTGGTGCTGTCCTGCCTCAAAACCAATCCCGACCCATTCCCGCCGAGGCGGCGAGCTCGACCCGGTTGAGGACTACCCATCTCCGAATTCCTCGCCGTCGTCGTCGTTCAGGATCCGGTTCTCTCCGGGGAGCTTATCCCCAGTCATGGACTTCACTCCGGCTTTGAGCAACGGTCACAACGATTCGTATAACTCGAGCTTCACTCGGTTCAATAGTATGCTCAATGCGGGTCTGCTGAACCCAATGTCGCCGCCGCCGCCGCGGTCCAGCCCGACCCTCTTCGAAATGATGGCCAGCGAGCCCGAAATGGCCAACCCGAAACCCGCCCAGATCCACCAAAACGGCGTCGCGCCGCCGCCGAGGACTACTCACATGGGTTTGGTCCAGGACAAGCAGGCGCTGATGATGCAGCGGGTTTCGGACCTCTTGGGTTCCCGGAGCCCCGGGAACCAGTTCAATGACCAGACCAACAGTGACATCAAGCTGACGTTGAGCTCCAAGGACGGGTTCAGCGTCTCGATGAGTCTGCACCGTCCGATTCTCATCGCGCACAGCCGGTTTTTCGCCGTGAAGCTCTCGGACAGGTGGGTCAAGCAGCAGAGAACGACGCCGTCTTCGTCGCCGCCGTACAATGTGGAGATTGCTGACTGTGATGACGTGGAGGTTTATATTGAGGCTTTGAGGTTGATGTATTGTAAGGATCTGAGGAAGAGACTAATGAAGGAGGACGTTCCTAAAGTGCTTGGGATTTTGAAGGTTTCGGCGGCAATTGGGTTTGATGCTGGTGTTTTATCTTGTTTGGAGTACTTGGAGGCGGCGCCGTGGGCTGAGGAAGAAGAGGAGAAGGTGGCATCGCTGTTGTCGGAGCTGCGGCTTGAAGGTGTTGGAGCCGGGGAAGTGTTGAAGAGGGTGTCGTTGGAAGTGGCTAATGGGACTGAGGAGGGTAATGACAATGAAGAAGTTTTAGTAAAGCTTCTGCATGTGGTTCTTGAAGGAAAGGATGAGAAGGCAAGGCGCGAGATGAAAGGATTGGTGACTAAGATGCTTCGTGAGAATTCGTCTCATAATGAACTCCGGAAAGAGTCGTTGTACTCGGCTTGTGATGGGTGTTTGCAATTGCTTTGCCACCATTTTTCTCGGGCAGCAGAGGCAGACTTGAAGGATGTGGGACAGATTGCAAGGCAAGCGGATAATTTGCATTGGATTTTGGATATTTTGATTGACAGACAAATGGCTGAGGATTTCTTGAAAACATGGGCATCTCAAACTGAGTTGTCTGAATCGCATTCTAAAGTGGCTGCAGTTCATAGATATGAGGTTAGCAGAGTTACAGCTCGACTCTTTGTTGGGATTGGAAAGGGTCAGCTGTTGGCTTCCAAGGACGTGAGGTTCTTGCTTTTGCGTACATGGTTGGTGCCATTTTATGATGATTTTGGATGGATGAGGAGGGCATCAAAAGGCCTTGATAGGCACTTGATTGAGGATGGTCTGAGCAACACAATTCTTACCCTGCCTTTAGCATGGCAACAAGAAATTTTGCTTGCATGGTTTAATCGGTTCTTGAACTCTGGTGAAGATTGCCCAAATATACAAAGAGGATTTGAAGTTTGGTGGAGGCGGTCCTTTTGGAGGCGGAATGGGGAGCAGGAAAGACCACGGCCATTACGAATTACAGCAGCAACCATTGAGAAGCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB

Protein Analysis

617

Amino Acids

69.28

Weight (kDa)

7.65

Isoelectric Point (pI)

59.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB-POZ_ANK-like PF25553 371 - 596 4.6e-64 BTB/POZ Ankyrin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013310)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G63850
fragaria_vesca FvH4_5g02930 FvH4_5g02930
malus_domestica MD06G1088400.v1.1 MD14G1109500.v1.1
prunus_persica Prupe.5G104400_v2.0.a1
pyrus_communis pycom06g08440 pycom14g10360
rosa_chinensis RchiOBHm_Chr7g0196961
rosa_laevigata RLG00000003977
rosa_multiflora Rmu_sc0001083.1_g000006
rosa_roxburghii Rroxscaffold_3G00258800
rosa_rugosa Rorug07G0037000
rosa_samantha Rh7AG161400 Rh7BG163600 Rh7CG169600 Rh7DG162900
rosa_wichuraiana Rw7G014120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 743
AccB1I GGYRCC 2 cut(s) 973, 1570
AccII CGCG 4 cut(s) 418, 506, 704, 1173
AccIII TCCGGA 1 cut(s) 1230
AclWI GGATC 4 cut(s) 262, 275, 481, 864
AcoI YGGCCR 3 cut(s) 447, 465, 1814
AcsI RAATTY 3 cut(s) 241, 1210, 1689
AcyI GRCGYC 4 cut(s) 88, 501, 764, 974
AfaI GTAC 5 cut(s) 25, 785, 962, 1247, 1561
AfiI CCNNNNNNNGG 4 cut(s) 223, 301, 660, 1785
AhlI ACTAGT 1 cut(s) 20
AjiI CACGTC 2 cut(s) 814, 1540
AjnI CCWGG 2 cut(s) 155, 540
AjuI GAANNNNNNNTTGG 2 cut(s) 647, 679
AloI GAACNNNNNNTCC 2 cut(s) 1529, 1561
Alw21I GWGCWC 2 cut(s) 213, 653
Alw26I GTCTC 4 cut(s) 145, 676, 862, 1221
AlwI GGATC 4 cut(s) 262, 275, 481, 864
AlwNI CAGNNNCTG 1 cut(s) 556
Ama87I CYCGRG 4 cut(s) 146, 349, 599, 1293
Aor13HI TCCGGA 1 cut(s) 1230
AoxI GGCC 4 cut(s) 447, 465, 1615, 1814
ApoI RAATTY 3 cut(s) 241, 1210, 1689
ArsI GACNNNNNNTTYG 2 cut(s) 754, 786
Asp700I GAANNNNTTC 1 cut(s) 608
AspLEI GCGC 5 cut(s) 508, 556, 706, 976, 1173
AspS9I GGNCC 4 cut(s) 420, 538, 577, 1776
AsuC2I CCSGG 7 cut(s) 115, 218, 282, 592, 600, 601, 1048
AsuHPI GGTGA 3 cut(s) 47, 1201, 1739
AsuII TTCGAA 1 cut(s) 438
AvaI CYCGRG 4 cut(s) 146, 349, 599, 1293
AvaII GGWCC 4 cut(s) 420, 538, 577, 1776
BalI TGGCCA 2 cut(s) 449, 467
BamHI GGATCC 1 cut(s) 267
BanI GGYRCC 2 cut(s) 973, 1570
BanII GRGCYC 4 cut(s) 213, 459, 599, 653
BbsI GAAGAC 1 cut(s) 762
Bbv12I GWGCWC 2 cut(s) 213, 653
BbvCI CCTCAGC 2 cut(s) 984, 1392
BccI CCATC 6 cut(s) 69, 241, 439, 1253, 1587, 1634
BceAI ACGGC 7 cut(s) 235, 514, 707, 751, 766, 961, 1829
BcgI CGANNNNNNTGC 2 cut(s) 664, 698
BciT130I CCWGG 2 cut(s) 157, 542
BcnI CCSGG 7 cut(s) 115, 218, 282, 592, 600, 601, 1048
BcoDI GTCTC 4 cut(s) 145, 676, 862, 1221
BcuI ACTAGT 1 cut(s) 20
BfaI CTAG 1 cut(s) 21
BfmI CTRYAG 1 cut(s) 1455
BfoI RGCGCY 2 cut(s) 557, 977
BglI GCCNNNNNGGC 1 cut(s) 204
BmcAI AGTACT 2 cut(s) 25, 962
Bme1390I CCNGG 9 cut(s) 115, 157, 218, 282, 542, 592, 600, 601, 1048
Bme18I GGWCC 4 cut(s) 420, 538, 577, 1776
BmeT110I CYCGRG 4 cut(s) 146, 349, 599, 1293
BmgBI CACGTC 2 cut(s) 814, 1540
BmgT120I GGNCC 4 cut(s) 420, 538, 577, 1776
BmiI GGNNCC 7 cut(s) 269, 589, 596, 605, 975, 1045, 1572
BmrFI CCNGG 9 cut(s) 115, 157, 218, 282, 542, 592, 600, 601, 1048
BmrI ACTGGG 1 cut(s) 290
BmsI GCATC 6 cut(s) 552, 925, 1016, 1188, 1424, 1616
BmuI ACTGGG 1 cut(s) 290
BoxI GACNNNNGTC 1 cut(s) 137
BpiI GAAGAC 1 cut(s) 762
BplI GAGNNNNNCTC 4 cut(s) 343, 375, 508, 540
Bpu10I CCTNAGC 2 cut(s) 984, 1392
Bpu14I TTCGAA 1 cut(s) 438
BpuMI CCSGG 7 cut(s) 115, 218, 282, 592, 600, 601, 1048
BsaBI GATNNNNATC 1 cut(s) 698
BsaHI GRCGYC 4 cut(s) 88, 501, 764, 974
BsaWI WCCGGW 2 cut(s) 270, 1230
Bsc4I CCNNNNNNNGG 4 cut(s) 223, 301, 660, 1785
Bse118I RCCGGY 1 cut(s) 711
Bse1I ACTGG 2 cut(s) 296, 607
Bse8I GATNNNNATC 1 cut(s) 698
BseAI TCCGGA 1 cut(s) 1230
BseBI CCWGG 2 cut(s) 157, 542
BseGI GGATG 5 cut(s) 1162, 1324, 1598, 1602, 1645
BseJI GATNNNNATC 1 cut(s) 698
BseLI CCNNNNNNNGG 4 cut(s) 223, 301, 660, 1785
BseMII CTCAG 6 cut(s) 851, 975, 1083, 1383, 1416, 1637
BseNI ACTGG 2 cut(s) 296, 607
BseRI GAGGAG 3 cut(s) 1010, 1109, 1615
BsgI GTGCAG 1 cut(s) 668
Bsh1236I CGCG 4 cut(s) 418, 506, 704, 1173
BshFI GGCC 4 cut(s) 449, 467, 1617, 1816
BshNI GGYRCC 2 cut(s) 973, 1570
BsiHKAI GWGCWC 2 cut(s) 213, 653
BsiHKCI CYCGRG 4 cut(s) 146, 349, 599, 1293
BslFI GGGAC 2 cut(s) 1102, 1338
BslI CCNNNNNNNGG 4 cut(s) 223, 301, 660, 1785
BsmAI GTCTC 4 cut(s) 145, 676, 862, 1221
BsmBI CGTCTC 2 cut(s) 676, 1221
BsmFI GGGAC 2 cut(s) 1102, 1338
BsmI GAATGC 1 cut(s) 1441
BsnI GGCC 4 cut(s) 449, 467, 1617, 1816
BsoBI CYCGRG 4 cut(s) 146, 349, 599, 1293
Bsp119I TTCGAA 1 cut(s) 438
Bsp1286I GDGCHC 4 cut(s) 213, 459, 599, 653
Bsp13I TCCGGA 1 cut(s) 1230
Bsp143I GATC 3 cut(s) 267, 486, 856
BspANI GGCC 4 cut(s) 449, 467, 1617, 1816
BspCNI CTCAG 6 cut(s) 852, 976, 1084, 1384, 1417, 1638
BspEI TCCGGA 1 cut(s) 1230
BspFNI CGCG 4 cut(s) 418, 506, 704, 1173
BspLI GGNNCC 7 cut(s) 269, 589, 596, 605, 975, 1045, 1572
BspMAI CTGCAG 1 cut(s) 1459
BspPI GGATC 4 cut(s) 262, 275, 481, 864
BspT104I TTCGAA 1 cut(s) 438
BspT107I GGYRCC 2 cut(s) 973, 1570
BsrFI RCCGGY 1 cut(s) 711
BsrI ACTGG 2 cut(s) 296, 607
BssAI RCCGGY 1 cut(s) 711
BssMI GATC 3 cut(s) 267, 486, 856
BssNI GRCGYC 4 cut(s) 88, 501, 764, 974
BssT1I CCWWGG 2 cut(s) 654, 1533
Bst2UI CCWGG 2 cut(s) 157, 542
Bst4CI ACNGT 4 cut(s) 329, 629, 689, 806
Bst6I CTCTTC 4 cut(s) 440, 860, 987, 1055
BstACI GRCGYC 4 cut(s) 88, 501, 764, 974
BstBI TTCGAA 1 cut(s) 438
BstC8I GCNNGC 6 cut(s) 209, 451, 455, 552, 1341, 1698
BstDEI CTNAG 7 cut(s) 860, 984, 1092, 1194, 1392, 1425, 1646
BstDSI CCRYGG 3 cut(s) 416, 977, 1811
BstENI CCTNNNNNAGG 1 cut(s) 1783
BstF5I GGATG 5 cut(s) 1162, 1324, 1598, 1602, 1645
BstFNI CGCG 4 cut(s) 418, 506, 704, 1173
BstH2I RGCGCY 2 cut(s) 557, 977
BstHHI GCGC 5 cut(s) 508, 556, 706, 976, 1173
BstKTI GATC 3 cut(s) 270, 489, 859
BstMAI GTCTC 4 cut(s) 145, 676, 862, 1221
BstMBI GATC 3 cut(s) 267, 486, 856
BstNI CCWGG 2 cut(s) 157, 542
BstNSI RCATGY 1 cut(s) 1139
BstPAI GACNNNNGTC 1 cut(s) 137
BstSCI CCNGG 9 cut(s) 113, 155, 216, 280, 540, 590, 598, 599, 1046
BstSFI CTRYAG 1 cut(s) 1455
BstUI CGCG 4 cut(s) 418, 506, 704, 1173
BstV2I GAAGAC 1 cut(s) 762
BstX2I RGATCY 3 cut(s) 267, 486, 856
BstYI RGATCY 3 cut(s) 267, 486, 856
BsuRI GGCC 4 cut(s) 449, 467, 1617, 1816
BtgI CCRYGG 3 cut(s) 416, 977, 1811
BtgZI GCGATG 2 cut(s) 685, 993
BtrI CACGTC 2 cut(s) 814, 1540
BtsCI GGATG 5 cut(s) 1162, 1324, 1598, 1602, 1645
BtsIMutI CAGTG 1 cut(s) 634
Cac8I GCNNGC 6 cut(s) 209, 451, 455, 552, 1341, 1698
CaiI CAGNNNCTG 1 cut(s) 556
CfoI GCGC 5 cut(s) 508, 556, 706, 976, 1173
Cfr10I RCCGGY 1 cut(s) 711
Cfr13I GGNCC 4 cut(s) 420, 538, 577, 1776
Cfr42I CCGCGG 1 cut(s) 419
Cfr9I CCCGGG 1 cut(s) 599
CseI GACGC 4 cut(s) 96, 490, 658, 772
Csp6I GTAC 5 cut(s) 24, 784, 961, 1246, 1560
CviAII CATG 7 cut(s) 301, 529, 1136, 1410, 1563, 1677, 1701
CviQI GTAC 5 cut(s) 24, 784, 961, 1246, 1560
DdeI CTNAG 7 cut(s) 860, 984, 1092, 1194, 1392, 1425, 1646
DinI GGCGCC 1 cut(s) 975
DpnI GATC 3 cut(s) 269, 488, 858
DpnII GATC 3 cut(s) 267, 486, 856
DrdI GACNNNNNNGTC 1 cut(s) 743
DseDI GACNNNNNNGTC 1 cut(s) 743
EaeI YGGCCR 3 cut(s) 447, 465, 1814
Eam1104I CTCTTC 4 cut(s) 440, 860, 987, 1055
EarI CTCTTC 4 cut(s) 440, 860, 987, 1055
EciI GGCGGA 1 cut(s) 1804
Ecl136II GAGCTC 2 cut(s) 211, 651
Eco130I CCWWGG 2 cut(s) 654, 1533
Eco147I AGGCCT 1 cut(s) 1617
Eco24I GRGCYC 4 cut(s) 213, 459, 599, 653
Eco47I GGWCC 4 cut(s) 420, 538, 577, 1776
Eco53kI GAGCTC 2 cut(s) 211, 651
Eco88I CYCGRG 4 cut(s) 146, 349, 599, 1293
EcoICRI GAGCTC 2 cut(s) 211, 651
EcoNI CCTNNNNNAGG 1 cut(s) 1783
EcoRI GAATTC 2 cut(s) 241, 1210
EcoRII CCWGG 2 cut(s) 155, 540
EcoT14I CCWWGG 2 cut(s) 654, 1533
EcoT38I GRGCYC 4 cut(s) 213, 459, 599, 653
EgeI GGCGCC 1 cut(s) 975
EheI GGCGCC 1 cut(s) 975
ErhI CCWWGG 2 cut(s) 654, 1533
Esp3I CGTCTC 2 cut(s) 676, 1221
FaeI CATG 7 cut(s) 304, 532, 1139, 1413, 1566, 1680, 1704
FaqI GGGAC 2 cut(s) 1102, 1338
FatI CATG 7 cut(s) 300, 528, 1135, 1409, 1562, 1676, 1700
FauI CCCGC 5 cut(s) 135, 203, 376, 487, 561
FokI GGATG 5 cut(s) 1169, 1331, 1605, 1609, 1652
FriOI GRGCYC 4 cut(s) 213, 459, 599, 653
FspBI CTAG 1 cut(s) 21
GlaI GCGC 5 cut(s) 507, 555, 705, 975, 1172
HaeII RGCGCY 2 cut(s) 557, 977
HaeIII GGCC 4 cut(s) 449, 467, 1617, 1816
HgaI GACGC 4 cut(s) 96, 490, 658, 772
HhaI GCGC 5 cut(s) 508, 556, 706, 976, 1173
Hin1I GRCGYC 4 cut(s) 88, 501, 764, 974
Hin1II CATG 7 cut(s) 304, 532, 1139, 1413, 1566, 1680, 1704
Hin6I GCGC 5 cut(s) 506, 554, 704, 974, 1171
HinP1I GCGC 5 cut(s) 506, 554, 704, 974, 1171
HindIII AAGCTT 1 cut(s) 1127
HinfI GANTC 6 cut(s) 338, 679, 694, 1238, 1436, 1494
HphI GGTGA 3 cut(s) 47, 1201, 1739
Hpy188I TCNGA 8 cut(s) 240, 577, 693, 736, 861, 1021, 1435, 1647
Hpy188III TCNNGA 8 cut(s) 184, 265, 673, 1145, 1205, 1231, 1402, 1717
Hpy99I CGWCG 7 cut(s) 136, 256, 259, 262, 506, 766, 778
HpyAV CCTTC 7 cut(s) 871, 904, 994, 1028, 1142, 1156, 1309
HpyCH4III ACNGT 4 cut(s) 329, 629, 689, 806
HpyCH4IV ACGT 4 cut(s) 644, 813, 885, 1539
HpyCH4V TGCA 8 cut(s) 565, 685, 1135, 1270, 1334, 1354, 1457, 1700
HpyF3I CTNAG 7 cut(s) 860, 984, 1092, 1194, 1392, 1425, 1646
HpySE526I ACGT 4 cut(s) 644, 813, 885, 1539
Hsp92I GRCGYC 4 cut(s) 88, 501, 764, 974
Hsp92II CATG 7 cut(s) 304, 532, 1139, 1413, 1566, 1680, 1704
HspAI GCGC 5 cut(s) 506, 554, 704, 974, 1171
KasI GGCGCC 1 cut(s) 973
Kpn2I TCCGGA 1 cut(s) 1230
KspI CCGCGG 1 cut(s) 419
Kzo9I GATC 3 cut(s) 267, 486, 856
LmnI GCTCC 6 cut(s) 285, 594, 656, 1021, 1043, 1798
LweI GCATC 6 cut(s) 552, 925, 1016, 1188, 1424, 1616
MaeI CTAG 1 cut(s) 21
MaeII ACGT 4 cut(s) 644, 813, 885, 1539
MaeIII GTNAC 4 cut(s) 329, 629, 1189, 1483
MalI GATC 3 cut(s) 269, 488, 858
MboI GATC 3 cut(s) 267, 486, 856
MboII GAAGA 8 cut(s) 427, 762, 877, 1001, 1004, 1072, 1124, 1742
MfeI CAATTG 2 cut(s) 924, 1271
MflI RGATCY 3 cut(s) 267, 486, 856
MhlI GDGCHC 4 cut(s) 213, 459, 599, 653
MlsI TGGCCA 2 cut(s) 449, 467
MluCI AATT 8 cut(s) 241, 924, 1210, 1271, 1348, 1656, 1689, 1824
MluNI TGGCCA 2 cut(s) 449, 467
Mly113I GGCGCC 1 cut(s) 974
MlyI GAGTC 3 cut(s) 688, 1247, 1488
MmeI TCCRAC 3 cut(s) 999, 1021, 1053
Mox20I TGGCCA 2 cut(s) 449, 467
MroI TCCGGA 1 cut(s) 1230
MroXI GAANNNNTTC 1 cut(s) 608
MscI TGGCCA 2 cut(s) 449, 467
MseI TTAA 1 cut(s) 1707
MslI CAYNNNNRTG 1 cut(s) 1467
Msp20I TGGCCA 2 cut(s) 449, 467
MspA1I CMGCKG 3 cut(s) 418, 568, 1522
MspR9I CCNGG 9 cut(s) 115, 157, 218, 282, 542, 592, 600, 601, 1048
MunI CAATTG 2 cut(s) 924, 1271
Mva1269I GAATGC 1 cut(s) 1441
MvaI CCWGG 2 cut(s) 157, 542
MvnI CGCG 4 cut(s) 418, 506, 704, 1173
NarI GGCGCC 1 cut(s) 974
NciI CCSGG 7 cut(s) 115, 218, 282, 592, 600, 601, 1048
NdeII GATC 3 cut(s) 267, 486, 856
NlaIII CATG 7 cut(s) 304, 532, 1139, 1413, 1566, 1680, 1704
NlaIV GGNNCC 7 cut(s) 269, 589, 596, 605, 975, 1045, 1572
NmeAIII GCCGAG 3 cut(s) 224, 540, 1229
NmuCI GTSAC 3 cut(s) 329, 629, 1189
NspI RCATGY 1 cut(s) 1139
NspV TTCGAA 1 cut(s) 438
PaeR7I CTCGAG 1 cut(s) 349
PceI AGGCCT 1 cut(s) 1617
PcsI WCGNNNNNNNCGW 7 cut(s) 254, 333, 347, 666, 770, 779, 1819
PctI GAATGC 1 cut(s) 1441
PdmI GAANNNNTTC 1 cut(s) 608
PfeI GAWTC 3 cut(s) 338, 694, 1436
PflFI GACNNNGTC 1 cut(s) 766
PfoI TCCNGGA 2 cut(s) 540, 590
PleI GAGTC 3 cut(s) 687, 1246, 1488
PluTI GGCGCC 1 cut(s) 977
PpsI GAGTC 3 cut(s) 687, 1246, 1488
PshAI GACNNNNGTC 1 cut(s) 137
Psp124BI GAGCTC 2 cut(s) 213, 653
Psp6I CCWGG 2 cut(s) 155, 540
PspGI CCWGG 2 cut(s) 155, 540
PspN4I GGNNCC 7 cut(s) 269, 589, 596, 605, 975, 1045, 1572
PspPI GGNCC 4 cut(s) 420, 538, 577, 1776
PspXI VCTCGAGB 1 cut(s) 349
PstI CTGCAG 1 cut(s) 1459
PstNI CAGNNNCTG 1 cut(s) 556
PsuI RGATCY 3 cut(s) 267, 486, 856
PsyI GACNNNGTC 1 cut(s) 766
PvuII CAGCTG 1 cut(s) 1522
RsaI GTAC 5 cut(s) 25, 785, 962, 1247, 1561
RsaNI GTAC 5 cut(s) 24, 784, 961, 1246, 1560
RseI CAYNNNNRTG 1 cut(s) 1467
SacI GAGCTC 2 cut(s) 213, 653
SacII CCGCGG 1 cut(s) 419
SaqAI TTAA 1 cut(s) 1707
Sau3AI GATC 3 cut(s) 267, 486, 856
Sau96I GGNCC 4 cut(s) 420, 538, 577, 1776
ScaI AGTACT 2 cut(s) 25, 962
SchI GAGTC 3 cut(s) 688, 1247, 1488
ScrFI CCNGG 9 cut(s) 115, 157, 218, 282, 542, 592, 600, 601, 1048
SduI GDGCHC 4 cut(s) 213, 459, 599, 653
SfaNI GCATC 6 cut(s) 552, 925, 1016, 1188, 1424, 1616
SfcI CTRYAG 1 cut(s) 1455
SfoI GGCGCC 1 cut(s) 975
Sfr274I CTCGAG 1 cut(s) 349
Sfr303I CCGCGG 1 cut(s) 419
SfuI TTCGAA 1 cut(s) 438
SgrBI CCGCGG 1 cut(s) 419
SinI GGWCC 4 cut(s) 420, 538, 577, 1776
SlaI CTCGAG 1 cut(s) 349
SmaI CCCGGG 1 cut(s) 601
SmiMI CAYNNNNRTG 1 cut(s) 1467
SmlI CTYRAG 1 cut(s) 349
SmoI CTYRAG 1 cut(s) 349
SpeI ACTAGT 1 cut(s) 20
Sse9I AATT 8 cut(s) 241, 924, 1210, 1271, 1348, 1656, 1689, 1824
SseBI AGGCCT 1 cut(s) 1617
SspDI GGCGCC 1 cut(s) 973
SspMI CTAG 1 cut(s) 21
SstI GAGCTC 2 cut(s) 213, 653
StuI AGGCCT 1 cut(s) 1617
StyD4I CCNGG 9 cut(s) 113, 155, 216, 280, 540, 590, 598, 599, 1046
StyI CCWWGG 2 cut(s) 654, 1533
TaaI ACNGT 4 cut(s) 329, 629, 689, 806
TaiI ACGT 4 cut(s) 647, 816, 888, 1542
TaqI TCGA 6 cut(s) 123, 213, 350, 438, 674, 1492
TasI AATT 8 cut(s) 241, 924, 1210, 1271, 1348, 1656, 1689, 1824
TatI WGTACW 3 cut(s) 23, 960, 1245
TfiI GAWTC 3 cut(s) 338, 694, 1436
Tru1I TTAA 1 cut(s) 1707
Tru9I TTAA 1 cut(s) 1707
TscAI CASTG 1 cut(s) 634
TseFI GTSAC 3 cut(s) 329, 629, 1189
Tsp45I GTSAC 3 cut(s) 329, 629, 1189
TspDTI ATGAA 5 cut(s) 890, 1125, 1193, 1239, 1451
TspMI CCCGGG 1 cut(s) 599
TspRI CASTG 1 cut(s) 634
Tth111I GACNNNGTC 1 cut(s) 766
VpaK11BI GGWCC 4 cut(s) 420, 538, 577, 1776
XagI CCTNNNNNAGG 1 cut(s) 1783
XapI RAATTY 3 cut(s) 241, 1210, 1689
XceI RCATGY 1 cut(s) 1139
XhoI CTCGAG 1 cut(s) 349
XmaI CCCGGG 1 cut(s) 599
XmnI GAANNNNTTC 1 cut(s) 608
XspI CTAG 1 cut(s) 21
ZrmI AGTACT 2 cut(s) 25, 962
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.