Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0012359

Physical Location & Seq

Genomic Coordinates Forward (+)

23207987 .. 23209426

Gene Structure 1440 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1141400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1440 bp

ATGAATTTTGGAGCAGCAGCCGGAGGAGCCATAGATGGTGGATTTTATACTGAGGATGACCAAAATATGGTGAGAGGTAAGCTCCCTTTCTCCTATGCCTCCTCTCCCACCTCATCTTCATCTTCTCCTCACTACAACAAAACCACCGGCATAGCTACTATGGTCCCTTCTTCCGCTGTCAGCAGAAGCAGCGGCTGGCACGACGGTGGCGGCGGCCCCGACATGAAGCTCGAGCTCATGGACTCGTCCCCCCGAGAAAACAGTGAAGGTGGTGGTGCTCAAAGAGAAGAAAACCCCATCCCCATAGAGAGGGAGCACATGTTCGACAAAGTCGTGACGCCGAGCGACGTGGGGAAGCTCAACCGCCTCGTCATCCCGAAACAGCACGCGGAGAAGTACTTCCCGTTGGATTCTTCCAGCAACGAGAAGGGGCTTCTGCTGAATTTCGAGGACCGGAACGGGAAGTCATGGCGGTTTAGGTACTCCTACTGGAACAGCAGCCAGAGCTACGTGATGACCAAAGGGTGGAGCAGGTTTGTGAAGGAGAAAAAGCTTGACGCTGGCGACACAGTCTCATTCCAGCGAGGGATTGGTGAGGTGGGGAAAGACCATCTTTTTATTGATTGGCGGCGCCGCCCGGATGCGCCTGATCCAAATCATCATCCCCACCACCACTACCCGCTTCATTCTCATCATCCACATTATCAGCCCAATTTTGCAATTCCTCATCAGCATCAATACTCCTGGAATCCCTACCAGTCGGTTCCATGGAGCCCGTTGCTGATGAGACCGCCCGGGGCAGTAATGACTCGGGAACACTTGCACTTGTCGCAGCAGCAGATTCATTCCGGCGTGCATCACCCCTATCGGAATACTGGGACCAGTGGTGGTGGTGGTTCGGGTTCTTATGGTTACGGAAATGTGGTTAACTCTTCTGGCCCGATTTATTATTTGAGATCAGCTTCGTCTGCTGCCGGCCCGCCACAGTTTCACGAGCAAGAGGGCAGTGGACTAATAGAATTACAACAACAGCAACAACATCAACAAGTACAGCTGGGTCGGGTTCATCATGAGTCGAATATGGTTTTGGAGTCGGTGCCGCTGGTCCATGGGAAGGCGGCAGCCAAGCGGATGAGGCTATTTGGAGTAAACATGGAGTGTCCCATATCGGAGTCAGATCATGAATGTGACTTATTGTCTTCAGCCACGTTATCATCATCCTCATCGTCCTCCCAGTATCATCATCATCATGCTAACCAACAACTTTCTCTGTCGCAACCCCCACCACTCCAATTAAGGCTCTACGACGGCATGCCTCTCCGCCACCAAGCTATGCCCTCTACCACCACTACTAGTACCACTACTAGTACCACTACCGACTTTCTCAACATAAGTGGGAAGGCCTCATCATCTTCCATGTCCTTGGACTTTGAGGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009791 GO:0009889 GO:0009908 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0022603 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0048366 GO:0048367 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0099402 GO:0140110 GO:1900618 GO:1901371 GO:1903506 GO:1905421 GO:2000024 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

480

Amino Acids

53.06

Weight (kDa)

6.79

Isoelectric Point (pI)

58.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	108 - 212	5.8e-27	B3 DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46870
fragaria_vesca	FvH4_5g10410
malus_domestica	MD06G1124400.v1.1 MD14G1141400.v1.1
prunus_persica	Prupe.5G134900_v2.0.a1
pyrus_communis	pycom06g11470 pycom14g11620
rosa_chinensis	RchiOBHm_Chr7g0187821
rosa_laevigata	RLG00000004754
rosa_multiflora	Rmu_co8399923.1_g000001 Rmu_sc0004483.1_g000041
rosa_roxburghii	Rroxscaffold_3G00267040
rosa_rugosa	Rorug06G0484500 Rorug06G0484600
rosa_samantha	Rh7AG089800 Rh7BG091400 Rh7CG090500 Rh7DG092200
rosa_wichuraiana	Rw7G007740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1433
Acc36I	ACCTGC	1 cut(s)	522
AccB1I	GGYRCC	2 cut(s)	630, 1096
AccB7I	CCANNNNNTGG	2 cut(s)	67, 525
AccII	CGCG	1 cut(s)	389
AclWI	GGATC	1 cut(s)	644
AcsI	RAATTY	2 cut(s)	4, 442
AcuI	CTGAAG	1 cut(s)	1185
AcyI	GRCGYC	2 cut(s)	338, 631
AfaI	GTAC	5 cut(s)	398, 482, 1050, 1357, 1369
AfiI	CCNNNNNNNGG	4 cut(s)	67, 309, 525, 1114
AflIII	ACRYGT	1 cut(s)	318
AhdI	GACNNNNNGTC	1 cut(s)	1195
AhlI	ACTAGT	2 cut(s)	1352, 1364
AjiI	CACGTC	1 cut(s)	349
AjnI	CCWGG	1 cut(s)	743
AjuI	GAANNNNNNNTTGG	2 cut(s)	1070, 1102
AleI	CACNNNNGTG	1 cut(s)	204
AloI	GAACNNNNNNTCC	2 cut(s)	305, 337
Alw21I	GWGCWC	3 cut(s)	237, 280, 318
Alw26I	GTCTC	2 cut(s)	577, 781
AlwI	GGATC	1 cut(s)	644
AlwNI	CAGNNNCTG	1 cut(s)	195
Ama87I	CYCGRG	4 cut(s)	230, 252, 794, 810
AoxI	GGCC	4 cut(s)	214, 937, 976, 1401
ApeKI	GCWGC	8 cut(s)	14, 17, 189, 498, 832, 835, 971, 1121
ApoI	RAATTY	2 cut(s)	4, 442
Asp700I	GAANNNNTTC	1 cut(s)	398
AspLEI	GCGC	2 cut(s)	633, 646
AspS9I	GGNCC	7 cut(s)	163, 215, 451, 879, 938, 977, 1105
AsuC2I	CCSGG	3 cut(s)	638, 795, 796
AsuHPI	GGTGA	3 cut(s)	82, 605, 851
AvaI	CYCGRG	4 cut(s)	230, 252, 794, 810
AvaII	GGWCC	4 cut(s)	163, 451, 879, 1105
BanI	GGYRCC	2 cut(s)	630, 1096
BanII	GRGCYC	2 cut(s)	237, 776
BauI	CACGAG	1 cut(s)	992
BbsI	GAAGAC	1 cut(s)	1191
Bbv12I	GWGCWC	3 cut(s)	237, 280, 318
BbvI	GCAGC	8 cut(s)	26, 29, 201, 510, 844, 847, 958, 1133
BccI	CCATC	3 cut(s)	29, 305, 618
BceAI	ACGGC	1 cut(s)	1324
BciT130I	CCWGG	1 cut(s)	745
BcnI	CCSGG	3 cut(s)	638, 795, 796
BcoDI	GTCTC	2 cut(s)	577, 781
BcuI	ACTAGT	2 cut(s)	1352, 1364
BfaI	CTAG	2 cut(s)	1353, 1365
BfoI	RGCGCY	1 cut(s)	634
BfuAI	ACCTGC	1 cut(s)	522
BmcAI	AGTACT	1 cut(s)	398
Bme1390I	CCNGG	4 cut(s)	638, 745, 795, 796
Bme18I	GGWCC	4 cut(s)	163, 451, 879, 1105
BmeRI	GACNNNNNGTC	1 cut(s)	1195
BmeT110I	CYCGRG	4 cut(s)	230, 252, 794, 810
BmgBI	CACGTC	1 cut(s)	349
BmgT120I	GGNCC	7 cut(s)	163, 215, 451, 879, 938, 977, 1105
BmiI	GGNNCC	8 cut(s)	28, 165, 217, 632, 765, 773, 880, 1098
BmrFI	CCNGG	4 cut(s)	638, 745, 795, 796
BmrI	ACTGGG	2 cut(s)	885, 1228
BmsI	GCATC	3 cut(s)	631, 742, 865
BmuI	ACTGGG	2 cut(s)	885, 1228
BpiI	GAAGAC	1 cut(s)	1191
BplI	GAGNNNNNCTC	2 cut(s)	66, 98
BpuMI	CCSGG	3 cut(s)	638, 795, 796
BsaAI	YACGTR	1 cut(s)	511
BsaBI	GATNNNNATC	1 cut(s)	654
BsaHI	GRCGYC	2 cut(s)	338, 631
BsaI	GGTCTC	1 cut(s)	781
BsaJI	CCNNGG	5 cut(s)	767, 794, 795, 1108, 1422
BsaWI	WCCGGW	1 cut(s)	453
BsaXI	ACNNNNNCTCC	2 cut(s)	305, 335
Bsc4I	CCNNNNNNNGG	4 cut(s)	67, 309, 525, 1114
Bse118I	RCCGGY	2 cut(s)	146, 974
Bse1I	ACTGG	5 cut(s)	494, 757, 880, 882, 1234
Bse8I	GATNNNNATC	1 cut(s)	654
BseBI	CCWGG	1 cut(s)	745
BseDI	CCNNGG	5 cut(s)	767, 794, 795, 1108, 1422
BseGI	GGATG	8 cut(s)	61, 297, 372, 646, 661, 694, 1137, 1217
BseJI	GATNNNNATC	1 cut(s)	654
BseLI	CCNNNNNNNGG	4 cut(s)	67, 309, 525, 1114
BseMII	CTCAG	1 cut(s)	42
BseNI	ACTGG	5 cut(s)	494, 757, 880, 882, 1234
BseRI	GAGGAG	3 cut(s)	39, 91, 117
BseXI	GCAGC	8 cut(s)	26, 29, 201, 510, 844, 847, 958, 1133
BseYI	CCCAGC	1 cut(s)	1054
Bsh1236I	CGCG	1 cut(s)	389
BshFI	GGCC	4 cut(s)	216, 939, 978, 1403
BshNI	GGYRCC	2 cut(s)	630, 1096
BsiHKAI	GWGCWC	3 cut(s)	237, 280, 318
BsiHKCI	CYCGRG	4 cut(s)	230, 252, 794, 810
BsiSI	CCGG	7 cut(s)	21, 147, 454, 638, 795, 849, 975
BslFI	GGGAC	4 cut(s)	149, 232, 892, 1146
BslI	CCNNNNNNNGG	4 cut(s)	67, 309, 525, 1114
BsmAI	GTCTC	2 cut(s)	577, 781
BsmFI	GGGAC	4 cut(s)	149, 232, 892, 1146
BsnI	GGCC	4 cut(s)	216, 939, 978, 1403
Bso31I	GGTCTC	1 cut(s)	781
BsoBI	CYCGRG	4 cut(s)	230, 252, 794, 810
Bsp1286I	GDGCHC	4 cut(s)	237, 280, 318, 776
Bsp143I	GATC	3 cut(s)	649, 956, 1177
Bsp19I	CCATGG	2 cut(s)	767, 1108
BspANI	GGCC	4 cut(s)	216, 939, 978, 1403
BspCNI	CTCAG	1 cut(s)	43
BspFNI	CGCG	1 cut(s)	389
BspHI	TCATGA	2 cut(s)	1069, 1180
BspLI	GGNNCC	8 cut(s)	28, 165, 217, 632, 765, 773, 880, 1098
BspMI	ACCTGC	1 cut(s)	522
BspPI	GGATC	1 cut(s)	644
BspT107I	GGYRCC	2 cut(s)	630, 1096
BspTNI	GGTCTC	1 cut(s)	781
BsrFI	RCCGGY	2 cut(s)	146, 974
BsrI	ACTGG	5 cut(s)	494, 757, 880, 882, 1234
BssAI	RCCGGY	2 cut(s)	146, 974
BssECI	CCNNGG	5 cut(s)	767, 794, 795, 1108, 1422
BssMI	GATC	3 cut(s)	649, 956, 1177
BssNI	GRCGYC	2 cut(s)	338, 631
BssSI	CACGAG	1 cut(s)	992
BssT1I	CCWWGG	3 cut(s)	767, 1108, 1422
Bst2BI	CACGAG	1 cut(s)	992
Bst2UI	CCWGG	1 cut(s)	745
Bst4CI	ACNGT	4 cut(s)	206, 263, 571, 987
Bst6I	CTCTTC	1 cut(s)	937
BstACI	GRCGYC	2 cut(s)	338, 631
BstBAI	YACGTR	1 cut(s)	511
BstC8I	GCNNGC	7 cut(s)	197, 387, 562, 854, 976, 980, 1313
BstDEI	CTNAG	1 cut(s)	51
BstDSI	CCRYGG	2 cut(s)	767, 1108
BstF5I	GGATG	8 cut(s)	61, 297, 372, 646, 661, 694, 1137, 1217
BstFNI	CGCG	1 cut(s)	389
BstH2I	RGCGCY	1 cut(s)	634
BstHHI	GCGC	2 cut(s)	633, 646
BstKTI	GATC	3 cut(s)	652, 959, 1180
BstMAI	GTCTC	2 cut(s)	577, 781
BstMBI	GATC	3 cut(s)	649, 956, 1177
BstMWI	GCNNNNNNNGC	6 cut(s)	26, 189, 504, 829, 968, 1135
BstNI	CCWGG	1 cut(s)	745
BstNSI	RCATGY	2 cut(s)	322, 1315
BstSCI	CCNGG	4 cut(s)	636, 743, 793, 794
BstUI	CGCG	1 cut(s)	389
BstV1I	GCAGC	8 cut(s)	26, 29, 201, 510, 844, 847, 958, 1133
BstV2I	GAAGAC	1 cut(s)	1191
BstXI	CCANNNNNNTGG	1 cut(s)	1423
BsuRI	GGCC	4 cut(s)	216, 939, 978, 1403
BtgI	CCRYGG	2 cut(s)	767, 1108
BtrI	CACGTC	1 cut(s)	349
BtsCI	GGATG	8 cut(s)	61, 297, 372, 646, 661, 694, 1137, 1217
BtsI	GCAGTG	1 cut(s)	1012
BtsIMutI	CAGTG	3 cut(s)	268, 889, 1012
BveI	ACCTGC	1 cut(s)	522
Cac8I	GCNNGC	7 cut(s)	197, 387, 562, 854, 976, 980, 1313
CaiI	CAGNNNCTG	1 cut(s)	195
CciI	TCATGA	2 cut(s)	1069, 1180
CfoI	GCGC	2 cut(s)	633, 646
Cfr10I	RCCGGY	2 cut(s)	146, 974
Cfr13I	GGNCC	7 cut(s)	163, 215, 451, 879, 938, 977, 1105
Cfr9I	CCCGGG	1 cut(s)	794
CseI	GACGC	2 cut(s)	346, 566
Csp6I	GTAC	5 cut(s)	397, 481, 1049, 1356, 1368
CspCI	CAANNNNNGTGG	2 cut(s)	1375, 1410
CviQI	GTAC	5 cut(s)	397, 481, 1049, 1356, 1368
DdeI	CTNAG	1 cut(s)	51
DinI	GGCGCC	1 cut(s)	632
DpnI	GATC	3 cut(s)	651, 958, 1179
DpnII	GATC	3 cut(s)	649, 956, 1177
DrdI	GACNNNNNNGTC	1 cut(s)	1433
DriI	GACNNNNNGTC	1 cut(s)	1195
DseDI	GACNNNNNNGTC	1 cut(s)	1433
Eam1104I	CTCTTC	1 cut(s)	937
Eam1105I	GACNNNNNGTC	1 cut(s)	1195
EarI	CTCTTC	1 cut(s)	937
EciI	GGCGGA	1 cut(s)	1310
Ecl136II	GAGCTC	1 cut(s)	235
Eco130I	CCWWGG	3 cut(s)	767, 1108, 1422
Eco147I	AGGCCT	1 cut(s)	1403
Eco24I	GRGCYC	2 cut(s)	237, 776
Eco31I	GGTCTC	1 cut(s)	781
Eco47I	GGWCC	4 cut(s)	163, 451, 879, 1105
Eco53kI	GAGCTC	1 cut(s)	235
Eco57I	CTGAAG	1 cut(s)	1185
Eco88I	CYCGRG	4 cut(s)	230, 252, 794, 810
EcoICRI	GAGCTC	1 cut(s)	235
EcoRII	CCWGG	1 cut(s)	743
EcoT14I	CCWWGG	3 cut(s)	767, 1108, 1422
EcoT38I	GRGCYC	2 cut(s)	237, 776
EgeI	GGCGCC	1 cut(s)	632
EheI	GGCGCC	1 cut(s)	632
ErhI	CCWWGG	3 cut(s)	767, 1108, 1422
FalI	AAGNNNNNCTT	2 cut(s)	597, 629
FaqI	GGGAC	4 cut(s)	149, 232, 892, 1146
FauI	CCCGC	2 cut(s)	687, 987
FokI	GGATG	8 cut(s)	68, 284, 359, 648, 653, 681, 1144, 1204
FriOI	GRGCYC	2 cut(s)	237, 776
FspBI	CTAG	2 cut(s)	1353, 1365
GlaI	GCGC	2 cut(s)	632, 645
GsaI	CCCAGC	1 cut(s)	1058
HaeII	RGCGCY	1 cut(s)	634
HaeIII	GGCC	4 cut(s)	216, 939, 978, 1403
HapII	CCGG	7 cut(s)	21, 147, 454, 638, 795, 849, 975
HgaI	GACGC	2 cut(s)	346, 566
HhaI	GCGC	2 cut(s)	633, 646
Hin1I	GRCGYC	2 cut(s)	338, 631
Hin6I	GCGC	2 cut(s)	631, 644
HinP1I	GCGC	2 cut(s)	631, 644
HincII	GTYRAC	1 cut(s)	928
HindII	GTYRAC	1 cut(s)	928
HindIII	AAGCTT	1 cut(s)	551
HinfI	GANTC	8 cut(s)	242, 410, 748, 808, 841, 1073, 1091, 1172
HpaI	GTTAAC	1 cut(s)	928
HpaII	CCGG	7 cut(s)	21, 147, 454, 638, 795, 849, 975
HphI	GGTGA	3 cut(s)	82, 605, 851
Hpy166II	GTNNAC	3 cut(s)	928, 1010, 1150
Hpy188I	TCNGA	3 cut(s)	870, 1171, 1177
Hpy188III	TCNNGA	6 cut(s)	334, 376, 812, 992, 1070, 1181
Hpy8I	GTNNAC	3 cut(s)	928, 1010, 1150
Hpy99I	CGWCG	3 cut(s)	206, 350, 1310
HpyAV	CCTTC	6 cut(s)	177, 260, 421, 535, 1108, 1393
HpyCH4III	ACNGT	4 cut(s)	206, 263, 571, 987
HpyCH4IV	ACGT	3 cut(s)	348, 510, 1208
HpyCH4V	TGCA	3 cut(s)	719, 823, 856
HpyF10VI	GCNNNNNNNGC	6 cut(s)	26, 189, 504, 829, 968, 1135
HpyF3I	CTNAG	1 cut(s)	51
HpySE526I	ACGT	3 cut(s)	348, 510, 1208
Hsp92I	GRCGYC	2 cut(s)	338, 631
HspAI	GCGC	2 cut(s)	631, 644
KasI	GGCGCC	1 cut(s)	630
KroI	GCCGGC	1 cut(s)	974
KroNI	GCCGGC	1 cut(s)	976
KspAI	GTTAAC	1 cut(s)	928
Kzo9I	GATC	3 cut(s)	649, 956, 1177
LmnI	GCTCC	6 cut(s)	11, 26, 87, 313, 528, 771
Lsp1109I	GCAGC	8 cut(s)	26, 29, 201, 510, 844, 847, 958, 1133
LweI	GCATC	3 cut(s)	631, 742, 865
MaeI	CTAG	2 cut(s)	1353, 1365
MaeII	ACGT	3 cut(s)	348, 510, 1208
MaeIII	GTNAC	3 cut(s)	334, 911, 1187
MalI	GATC	3 cut(s)	651, 958, 1179
MboI	GATC	3 cut(s)	649, 956, 1177
MboII	GAAGA	8 cut(s)	108, 114, 162, 299, 405, 924, 1191, 1404
MhlI	GDGCHC	4 cut(s)	237, 280, 318, 776
MluCI	AATT	6 cut(s)	4, 442, 712, 720, 1019, 1292
Mly113I	GGCGCC	1 cut(s)	631
MlyI	GAGTC	5 cut(s)	236, 802, 1082, 1100, 1181
MmeI	TCCRAC	1 cut(s)	387
MroNI	GCCGGC	1 cut(s)	974
MroXI	GAANNNNTTC	1 cut(s)	398
MseI	TTAA	2 cut(s)	927, 1295
MslI	CAYNNNNRTG	3 cut(s)	204, 1185, 1248
MspA1I	CMGCKG	4 cut(s)	176, 192, 1054, 1102
MspI	CCGG	7 cut(s)	21, 147, 454, 638, 795, 849, 975
MspR9I	CCNGG	4 cut(s)	638, 745, 795, 796
MvaI	CCWGG	1 cut(s)	745
MvnI	CGCG	1 cut(s)	389
MwoI	GCNNNNNNNGC	6 cut(s)	26, 189, 504, 829, 968, 1135
NaeI	GCCGGC	1 cut(s)	976
NarI	GGCGCC	1 cut(s)	631
NciI	CCSGG	3 cut(s)	638, 795, 796
NcoI	CCATGG	2 cut(s)	767, 1108
NdeII	GATC	3 cut(s)	649, 956, 1177
NgoMIV	GCCGGC	1 cut(s)	974
NlaIV	GGNNCC	8 cut(s)	28, 165, 217, 632, 765, 773, 880, 1098
NmeAIII	GCCGAG	1 cut(s)	366
NmuCI	GTSAC	2 cut(s)	334, 1187
NspI	RCATGY	2 cut(s)	322, 1315
OliI	CACNNNNGTG	1 cut(s)	204
PaeI	GCATGC	1 cut(s)	1315
PaeR7I	CTCGAG	1 cut(s)	230
PagI	TCATGA	2 cut(s)	1069, 1180
PceI	AGGCCT	1 cut(s)	1403
PciI	ACATGT	1 cut(s)	318
PcsI	WCGNNNNNNNCGW	1 cut(s)	330
PdiI	GCCGGC	1 cut(s)	976
PdmI	GAANNNNTTC	1 cut(s)	398
PfeI	GAWTC	3 cut(s)	410, 748, 841
PflFI	GACNNNGTC	2 cut(s)	329, 569
PflMI	CCANNNNNTGG	2 cut(s)	67, 525
PfoI	TCCNGGA	1 cut(s)	743
PleI	GAGTC	5 cut(s)	236, 802, 1081, 1099, 1180
PluTI	GGCGCC	1 cut(s)	634
PpsI	GAGTC	5 cut(s)	236, 802, 1081, 1099, 1180
Ppu21I	YACGTR	1 cut(s)	511
PscI	ACATGT	1 cut(s)	318
Psp124BI	GAGCTC	1 cut(s)	237
Psp6I	CCWGG	1 cut(s)	743
PspFI	CCCAGC	1 cut(s)	1054
PspGI	CCWGG	1 cut(s)	743
PspN4I	GGNNCC	8 cut(s)	28, 165, 217, 632, 765, 773, 880, 1098
PspPI	GGNCC	7 cut(s)	163, 215, 451, 879, 938, 977, 1105
PspXI	VCTCGAGB	1 cut(s)	230
PstNI	CAGNNNCTG	1 cut(s)	195
PsyI	GACNNNGTC	2 cut(s)	329, 569
PvuII	CAGCTG	1 cut(s)	1054
RsaI	GTAC	5 cut(s)	398, 482, 1050, 1357, 1369
RsaNI	GTAC	5 cut(s)	397, 481, 1049, 1356, 1368
RseI	CAYNNNNRTG	3 cut(s)	204, 1185, 1248
SacI	GAGCTC	1 cut(s)	237
SaqAI	TTAA	2 cut(s)	927, 1295
Sau3AI	GATC	3 cut(s)	649, 956, 1177
Sau96I	GGNCC	7 cut(s)	163, 215, 451, 879, 938, 977, 1105
ScaI	AGTACT	1 cut(s)	398
SchI	GAGTC	5 cut(s)	236, 802, 1082, 1100, 1181
ScrFI	CCNGG	4 cut(s)	638, 745, 795, 796
SduI	GDGCHC	4 cut(s)	237, 280, 318, 776
SfaNI	GCATC	3 cut(s)	631, 742, 865
SfoI	GGCGCC	1 cut(s)	632
Sfr274I	CTCGAG	1 cut(s)	230
SinI	GGWCC	4 cut(s)	163, 451, 879, 1105
SlaI	CTCGAG	1 cut(s)	230
SmaI	CCCGGG	1 cut(s)	796
SmiMI	CAYNNNNRTG	3 cut(s)	204, 1185, 1248
SmlI	CTYRAG	1 cut(s)	230
SmoI	CTYRAG	1 cut(s)	230
SpeI	ACTAGT	2 cut(s)	1352, 1364
SphI	GCATGC	1 cut(s)	1315
Sse9I	AATT	6 cut(s)	4, 442, 712, 720, 1019, 1292
SseBI	AGGCCT	1 cut(s)	1403
SspDI	GGCGCC	1 cut(s)	630
SspMI	CTAG	2 cut(s)	1353, 1365
SstI	GAGCTC	1 cut(s)	237
StuI	AGGCCT	1 cut(s)	1403
StyD4I	CCNGG	4 cut(s)	636, 743, 793, 794
StyI	CCWWGG	3 cut(s)	767, 1108, 1422
TaaI	ACNGT	4 cut(s)	206, 263, 571, 987
TaiI	ACGT	3 cut(s)	351, 513, 1211
TaqI	TCGA	4 cut(s)	231, 324, 447, 1076
TasI	AATT	6 cut(s)	4, 442, 712, 720, 1019, 1292
TatI	WGTACW	2 cut(s)	396, 1048
TauI	GCSGC	7 cut(s)	195, 213, 216, 631, 636, 1102, 1121
TfiI	GAWTC	3 cut(s)	410, 748, 841
Tru1I	TTAA	2 cut(s)	927, 1295
Tru9I	TTAA	2 cut(s)	927, 1295
TscAI	CASTG	3 cut(s)	268, 889, 1012
TseFI	GTSAC	2 cut(s)	334, 1187
TseI	GCWGC	8 cut(s)	14, 17, 189, 498, 832, 835, 971, 1121
Tsp45I	GTSAC	2 cut(s)	334, 1187
TspDTI	ATGAA	7 cut(s)	17, 108, 239, 674, 833, 1055, 1197
TspGWI	ACGGA	1 cut(s)	930
TspMI	CCCGGG	1 cut(s)	794
TspRI	CASTG	3 cut(s)	268, 889, 1012
Tth111I	GACNNNGTC	2 cut(s)	329, 569
Van91I	CCANNNNNTGG	2 cut(s)	67, 525
VpaK11BI	GGWCC	4 cut(s)	163, 451, 879, 1105
XapI	RAATTY	2 cut(s)	4, 442
XceI	RCATGY	2 cut(s)	322, 1315
XcmI	CCANNNNNNNNNTGG	1 cut(s)	587
XhoI	CTCGAG	1 cut(s)	230
XmaI	CCCGGG	1 cut(s)	794
XmnI	GAANNNNTTC	1 cut(s)	398
XspI	CTAG	2 cut(s)	1353, 1365
ZrmI	AGTACT	1 cut(s)	398

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.