Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0012359

Physical Location & Seq

Genomic Coordinates Forward (+)

16773145 .. 16774533

Gene Structure 1389 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g11470.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1389 bp

ATGAATTTCGAAGCAGCAGCCGCAAGAGCTAGAGATGCTGGATTTTCTACTGAGGATGACCAAAATATGGTGAGAGGTAAGCTTCCTTTCTCATATTCTTCCTCTCCCTCTTCATCTTCGTCTTCTCCTCACTACAACAAAACCACCGGCGTAGCCACTCTGGTCCCTTCTTCCGCTGTCAGCAGAAGCCGCAGCTGGCACGACGGCAGAGGCAGCCCCGACACGAAGCTCGAGCTTATGGACTCGGCCCCCCGTGAAAACAACGAAGATGGTGGTGCTCAAAGAGAAGAAAACCCAATCCCCATCGAGAGGGAGCACATGTTCGACAAAGTCGTGACGCCGAGCGACGTAGGGAAGCTCAACCGCCTCGTCATCCCGAAACAGCACGCCGAGAAGTACTTCCCGTTGGATTCTTCCAGCAACGAGAAGGGGCTTCTGCTGAATTTCGAGGACCGGAACGGGAAGCCATGGCGGTTTAGGTACTCCTACTGGAACAGCAGCCAGAGCTACGTGATGACCAAAGGGTGGAGCAGGTTTGTGAAGGAGAAAAAGCTCGACGCCGGCGACATAGTCTCTTTCCTGCGAGGACTTGGTGAGGTGGGGAAAGACCGTCTTTTTATTGATTGGCGGCGCCGCCCGGATGCGCCTTATCCAAACCATCACCACCACCACCACCCACTTCATCCACATTATCAGCCCAATTTTGCAATTCCTCATCAGCATCAATACTCCTGGAACCCTCACCGGCCGGTTCCATGGAGCCCGTTGCTGATGAGACCTCCCGGGGTAGTAGTGACTCCGGACCACTTGTCGCAGCAGCAGATTAATTACGGCGTCAATATGCATCACCCATATCGAAATACTGGGACGAGTGGTGGTGGTTCGGGTTCTTATGGTTACGGAAATGTGGTTAACTCTACTGGGCCGATTTATTACTTGAGATCAGCTTCATCCGCTGCCCCGCCACAGTTTCATGAGCAAGGGGACAGCGGACTAATAGAATTTCAACAACACCAACAAGTACAGCTGGGTCGGGTTCATGAGTCGAATATGGTTCTGGAGTCGGTGCCAGTGGTCCATGGGAAGGCGGCAGCCAAGAAGCTGAGGCTATTTGGAGTAAACATGGAGTGTCCCATATCGGAGTCGGATCATGAATGTGACATATTGTCTTCAACCACATTATCATCATCCCAGTATCATCATCATCATGCTCATCACCAACTTTCGCCGCCATCGCAACCCCCACCGCTCCAATTAAGGCTCTACGACGGCATGCCTCTCCACCACCAAACCATGCCCTCCACCACCACTACTAGTACCACCACCGACTTTCTCAACATGAGGGGCAAGGCCTCCCCATCTTCCATGTCCTTGGACTTTGATGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009791 GO:0009889 GO:0009908 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0022603 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0048366 GO:0048367 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0099402 GO:0140110 GO:1900618 GO:1901371 GO:1903506 GO:1905421 GO:2000024 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

463

Amino Acids

51.87

Weight (kDa)

7.5

Isoelectric Point (pI)

56.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	108 - 212	5.2e-26	B3 DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46870
fragaria_vesca	FvH4_5g10410
malus_domestica	MD06G1124400.v1.1 MD14G1141400.v1.1
prunus_persica	Prupe.5G134900_v2.0.a1
pyrus_communis	pycom06g11470 pycom14g11620
rosa_chinensis	RchiOBHm_Chr7g0187821
rosa_laevigata	RLG00000004754
rosa_multiflora	Rmu_co8399923.1_g000001 Rmu_sc0004483.1_g000041
rosa_roxburghii	Rroxscaffold_3G00267040
rosa_rugosa	Rorug06G0484500 Rorug06G0484600
rosa_samantha	Rh7AG089800 Rh7BG091400 Rh7CG090500 Rh7DG092200
rosa_wichuraiana	Rw7G007740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1382
Acc36I	ACCTGC	1 cut(s)	522
AccB1I	GGYRCC	2 cut(s)	630, 1066
AccB7I	CCANNNNNTGG	2 cut(s)	67, 525
AccBSI	CCGCTC	1 cut(s)	1249
AccIII	TCCGGA	1 cut(s)	799
AclWI	GGATC	1 cut(s)	1155
AcoI	YGGCCR	1 cut(s)	746
AcsI	RAATTY	3 cut(s)	4, 442, 1001
AcyI	GRCGYC	4 cut(s)	338, 558, 631, 834
AfaI	GTAC	4 cut(s)	398, 482, 1023, 1318
AfiI	CCNNNNNNNGG	4 cut(s)	67, 309, 525, 1084
AflIII	ACRYGT	1 cut(s)	318
AgsI	TTSAA	2 cut(s)	1007, 1173
AhdI	GACNNNNNGTC	2 cut(s)	808, 1165
AhlI	ACTAGT	1 cut(s)	1313
AjnI	CCWGG	1 cut(s)	731
AloI	GAACNNNNNNTCC	2 cut(s)	305, 337
Alw21I	GWGCWC	2 cut(s)	280, 318
Alw26I	GTCTC	2 cut(s)	577, 769
AlwI	GGATC	1 cut(s)	1155
Ama87I	CYCGRG	2 cut(s)	230, 782
Aor13HI	TCCGGA	1 cut(s)	799
AoxI	GGCC	4 cut(s)	246, 746, 923, 1350
ApeKI	GCWGC	9 cut(s)	14, 17, 192, 213, 498, 814, 817, 956, 1091
ApoI	RAATTY	3 cut(s)	4, 442, 1001
AseI	ATTAAT	1 cut(s)	825
Asp700I	GAANNNNTTC	1 cut(s)	398
AspLEI	GCGC	2 cut(s)	633, 646
AspS9I	GGNCC	6 cut(s)	163, 247, 451, 802, 923, 1075
AsuC2I	CCSGG	3 cut(s)	638, 783, 784
AsuHPI	GGTGA	6 cut(s)	82, 605, 653, 734, 839, 1208
AsuII	TTCGAA	1 cut(s)	9
AvaI	CYCGRG	2 cut(s)	230, 782
AvaII	GGWCC	4 cut(s)	163, 451, 802, 1075
BanI	GGYRCC	2 cut(s)	630, 1066
BanII	GRGCYC	1 cut(s)	764
BbsI	GAAGAC	2 cut(s)	114, 1161
Bbv12I	GWGCWC	2 cut(s)	280, 318
BbvCI	CCTCAGC	1 cut(s)	1103
BbvI	GCAGC	9 cut(s)	26, 29, 204, 225, 510, 826, 829, 943, 1103
BccI	CCATC	5 cut(s)	263, 311, 666, 1240, 1366
BceAI	ACGGC	3 cut(s)	220, 847, 1285
BciT130I	CCWGG	1 cut(s)	733
BcnI	CCSGG	3 cut(s)	638, 783, 784
BcoDI	GTCTC	2 cut(s)	577, 769
BcuI	ACTAGT	1 cut(s)	1313
BfaI	CTAG	3 cut(s)	30, 1314, 1387
BfoI	RGCGCY	1 cut(s)	634
BfuAI	ACCTGC	1 cut(s)	522
BmcAI	AGTACT	1 cut(s)	398
Bme1390I	CCNGG	4 cut(s)	638, 733, 783, 784
Bme18I	GGWCC	4 cut(s)	163, 451, 802, 1075
BmeRI	GACNNNNNGTC	2 cut(s)	808, 1165
BmeT110I	CYCGRG	2 cut(s)	230, 782
BmgT120I	GGNCC	6 cut(s)	163, 247, 451, 802, 923, 1075
BmiI	GGNNCC	7 cut(s)	165, 249, 632, 737, 753, 761, 1068
BmrFI	CCNGG	4 cut(s)	638, 733, 783, 784
BmrI	ACTGGG	3 cut(s)	873, 930, 1186
BmsI	GCATC	4 cut(s)	25, 631, 730, 853
BmuI	ACTGGG	3 cut(s)	873, 930, 1186
BpiI	GAAGAC	2 cut(s)	114, 1161
BpmI	CTGGAG	1 cut(s)	1079
Bpu10I	CCTNAGC	1 cut(s)	1103
Bpu14I	TTCGAA	1 cut(s)	9
BpuEI	CTTGAG	1 cut(s)	958
BpuMI	CCSGG	3 cut(s)	638, 783, 784
BsaAI	YACGTR	1 cut(s)	511
BsaHI	GRCGYC	4 cut(s)	338, 558, 631, 834
BsaI	GGTCTC	1 cut(s)	769
BsaJI	CCNNGG	6 cut(s)	467, 755, 782, 783, 1078, 1371
BsaWI	WCCGGW	2 cut(s)	453, 799
BsaXI	ACNNNNNCTCC	2 cut(s)	305, 335
Bsc4I	CCNNNNNNNGG	4 cut(s)	67, 309, 525, 1084
Bse118I	RCCGGY	4 cut(s)	146, 560, 744, 748
Bse1I	ACTGG	5 cut(s)	494, 868, 925, 1070, 1192
BseAI	TCCGGA	1 cut(s)	799
BseBI	CCWGG	1 cut(s)	733
BseDI	CCNNGG	6 cut(s)	467, 755, 782, 783, 1078, 1371
BseGI	GGATG	6 cut(s)	61, 372, 646, 682, 950, 1187
BseLI	CCNNNNNNNGG	4 cut(s)	67, 309, 525, 1084
BseMII	CTCAG	2 cut(s)	42, 1094
BseNI	ACTGG	5 cut(s)	494, 868, 925, 1070, 1192
BseRI	GAGGAG	1 cut(s)	117
BseX3I	CGGCCG	1 cut(s)	746
BseXI	GCAGC	9 cut(s)	26, 29, 204, 225, 510, 826, 829, 943, 1103
BseYI	CCCAGC	1 cut(s)	1027
Bsh1285I	CGRYCG	1 cut(s)	749
BshFI	GGCC	4 cut(s)	248, 748, 925, 1352
BshNI	GGYRCC	2 cut(s)	630, 1066
BsiEI	CGRYCG	1 cut(s)	749
BsiHKAI	GWGCWC	2 cut(s)	280, 318
BsiHKCI	CYCGRG	2 cut(s)	230, 782
BsiSI	CCGG	8 cut(s)	147, 454, 561, 638, 745, 749, 783, 800
BslFI	GGGAC	4 cut(s)	149, 880, 998, 1116
BslI	CCNNNNNNNGG	4 cut(s)	67, 309, 525, 1084
BsmAI	GTCTC	2 cut(s)	577, 769
BsmFI	GGGAC	4 cut(s)	149, 880, 998, 1116
BsnI	GGCC	4 cut(s)	248, 748, 925, 1352
Bso31I	GGTCTC	1 cut(s)	769
BsoBI	CYCGRG	2 cut(s)	230, 782
Bsp119I	TTCGAA	1 cut(s)	9
Bsp1286I	GDGCHC	3 cut(s)	280, 318, 764
Bsp13I	TCCGGA	1 cut(s)	799
Bsp143I	GATC	2 cut(s)	941, 1147
Bsp19I	CCATGG	3 cut(s)	467, 755, 1078
BspANI	GGCC	4 cut(s)	248, 748, 925, 1352
BspCNI	CTCAG	2 cut(s)	43, 1095
BspEI	TCCGGA	1 cut(s)	799
BspHI	TCATGA	3 cut(s)	973, 1039, 1150
BspLI	GGNNCC	7 cut(s)	165, 249, 632, 737, 753, 761, 1068
BspMI	ACCTGC	1 cut(s)	522
BspPI	GGATC	1 cut(s)	1155
BspT104I	TTCGAA	1 cut(s)	9
BspT107I	GGYRCC	2 cut(s)	630, 1066
BspTNI	GGTCTC	1 cut(s)	769
BsrBI	CCGCTC	1 cut(s)	1249
BsrFI	RCCGGY	4 cut(s)	146, 560, 744, 748
BsrI	ACTGG	5 cut(s)	494, 868, 925, 1070, 1192
BssAI	RCCGGY	4 cut(s)	146, 560, 744, 748
BssECI	CCNNGG	6 cut(s)	467, 755, 782, 783, 1078, 1371
BssMI	GATC	2 cut(s)	941, 1147
BssNI	GRCGYC	4 cut(s)	338, 558, 631, 834
BssT1I	CCWWGG	4 cut(s)	467, 755, 1078, 1371
Bst2UI	CCWGG	1 cut(s)	733
Bst4CI	ACNGT	2 cut(s)	611, 969
Bst6I	CTCTTC	1 cut(s)	115
BstACI	GRCGYC	4 cut(s)	338, 558, 631, 834
BstBAI	YACGTR	1 cut(s)	511
BstBI	TTCGAA	1 cut(s)	9
BstC8I	GCNNGC	4 cut(s)	197, 387, 562, 1274
BstDEI	CTNAG	2 cut(s)	51, 1103
BstDSI	CCRYGG	3 cut(s)	467, 755, 1078
BstF5I	GGATG	6 cut(s)	61, 372, 646, 682, 950, 1187
BstH2I	RGCGCY	1 cut(s)	634
BstHHI	GCGC	2 cut(s)	633, 646
BstKTI	GATC	2 cut(s)	944, 1150
BstMAI	GTCTC	2 cut(s)	577, 769
BstMBI	GATC	2 cut(s)	941, 1147
BstMCI	CGRYCG	1 cut(s)	749
BstMWI	GCNNNNNNNGC	8 cut(s)	20, 26, 35, 189, 213, 504, 953, 1234
BstNI	CCWGG	1 cut(s)	733
BstNSI	RCATGY	2 cut(s)	322, 1276
BstSCI	CCNGG	4 cut(s)	636, 731, 781, 782
BstV1I	GCAGC	9 cut(s)	26, 29, 204, 225, 510, 826, 829, 943, 1103
BstV2I	GAAGAC	2 cut(s)	114, 1161
BstXI	CCANNNNNNTGG	1 cut(s)	1372
BstZI	CGGCCG	1 cut(s)	746
BsuRI	GGCC	4 cut(s)	248, 748, 925, 1352
BtgI	CCRYGG	3 cut(s)	467, 755, 1078
BtgZI	GCGATG	1 cut(s)	1218
BtsCI	GGATG	6 cut(s)	61, 372, 646, 682, 950, 1187
BtsIMutI	CAGTG	1 cut(s)	1077
BveI	ACCTGC	1 cut(s)	522
Cac8I	GCNNGC	4 cut(s)	197, 387, 562, 1274
CciI	TCATGA	3 cut(s)	973, 1039, 1150
CfoI	GCGC	2 cut(s)	633, 646
Cfr10I	RCCGGY	4 cut(s)	146, 560, 744, 748
Cfr13I	GGNCC	6 cut(s)	163, 247, 451, 802, 923, 1075
Cfr9I	CCCGGG	1 cut(s)	782
CseI	GACGC	3 cut(s)	346, 566, 823
Csp6I	GTAC	4 cut(s)	397, 481, 1022, 1317
CviQI	GTAC	4 cut(s)	397, 481, 1022, 1317
DdeI	CTNAG	2 cut(s)	51, 1103
DinI	GGCGCC	1 cut(s)	632
DpnI	GATC	2 cut(s)	943, 1149
DpnII	GATC	2 cut(s)	941, 1147
DrdI	GACNNNNNNGTC	1 cut(s)	1382
DriI	GACNNNNNGTC	2 cut(s)	808, 1165
DseDI	GACNNNNNNGTC	1 cut(s)	1382
EaeI	YGGCCR	1 cut(s)	746
EagI	CGGCCG	1 cut(s)	746
Eam1104I	CTCTTC	1 cut(s)	115
Eam1105I	GACNNNNNGTC	2 cut(s)	808, 1165
EarI	CTCTTC	1 cut(s)	115
EclXI	CGGCCG	1 cut(s)	746
Eco130I	CCWWGG	4 cut(s)	467, 755, 1078, 1371
Eco147I	AGGCCT	1 cut(s)	1352
Eco24I	GRGCYC	1 cut(s)	764
Eco31I	GGTCTC	1 cut(s)	769
Eco47I	GGWCC	4 cut(s)	163, 451, 802, 1075
Eco52I	CGGCCG	1 cut(s)	746
Eco88I	CYCGRG	2 cut(s)	230, 782
EcoRII	CCWGG	1 cut(s)	731
EcoT14I	CCWWGG	4 cut(s)	467, 755, 1078, 1371
EcoT22I	ATGCAT	1 cut(s)	846
EcoT38I	GRGCYC	1 cut(s)	764
EgeI	GGCGCC	1 cut(s)	632
EheI	GGCGCC	1 cut(s)	632
ErhI	CCWWGG	4 cut(s)	467, 755, 1078, 1371
FalI	AAGNNNNNCTT	2 cut(s)	597, 629
FaqI	GGGAC	4 cut(s)	149, 880, 998, 1116
FauI	CCCGC	1 cut(s)	969
FokI	GGATG	6 cut(s)	68, 359, 653, 669, 937, 1174
FriOI	GRGCYC	1 cut(s)	764
FspBI	CTAG	3 cut(s)	30, 1314, 1387
GlaI	GCGC	2 cut(s)	632, 645
GsaI	CCCAGC	1 cut(s)	1031
GsuI	CTGGAG	1 cut(s)	1079
HaeII	RGCGCY	1 cut(s)	634
HaeIII	GGCC	4 cut(s)	248, 748, 925, 1352
HapII	CCGG	8 cut(s)	147, 454, 561, 638, 745, 749, 783, 800
HgaI	GACGC	3 cut(s)	346, 566, 823
HhaI	GCGC	2 cut(s)	633, 646
Hin1I	GRCGYC	4 cut(s)	338, 558, 631, 834
Hin6I	GCGC	2 cut(s)	631, 644
HinP1I	GCGC	2 cut(s)	631, 644
HincII	GTYRAC	1 cut(s)	913
HindII	GTYRAC	1 cut(s)	913
HindIII	AAGCTT	1 cut(s)	80
HinfI	GANTC	6 cut(s)	242, 410, 796, 1043, 1061, 1142
HpaI	GTTAAC	1 cut(s)	913
HpaII	CCGG	8 cut(s)	147, 454, 561, 638, 745, 749, 783, 800
HphI	GGTGA	6 cut(s)	82, 605, 653, 734, 839, 1208
Hpy166II	GTNNAC	2 cut(s)	913, 1120
Hpy188I	TCNGA	2 cut(s)	1141, 1147
Hpy188III	TCNNGA	8 cut(s)	307, 334, 376, 800, 974, 1040, 1058, 1151
Hpy8I	GTNNAC	2 cut(s)	913, 1120
Hpy99I	CGWCG	4 cut(s)	206, 350, 560, 1271
HpyAV	CCTTC	4 cut(s)	177, 421, 535, 1078
HpyCH4III	ACNGT	2 cut(s)	611, 969
HpyCH4IV	ACGT	2 cut(s)	348, 510
HpyCH4V	TGCA	2 cut(s)	707, 844
HpyF10VI	GCNNNNNNNGC	8 cut(s)	20, 26, 35, 189, 213, 504, 953, 1234
HpyF3I	CTNAG	2 cut(s)	51, 1103
HpySE526I	ACGT	2 cut(s)	348, 510
Hsp92I	GRCGYC	4 cut(s)	338, 558, 631, 834
HspAI	GCGC	2 cut(s)	631, 644
KasI	GGCGCC	1 cut(s)	630
Kpn2I	TCCGGA	1 cut(s)	799
KroI	GCCGGC	1 cut(s)	560
KroNI	GCCGGC	1 cut(s)	562
KspAI	GTTAAC	1 cut(s)	913
Kzo9I	GATC	2 cut(s)	941, 1147
LmnI	GCTCC	4 cut(s)	313, 528, 759, 1254
Lsp1109I	GCAGC	9 cut(s)	26, 29, 204, 225, 510, 826, 829, 943, 1103
LweI	GCATC	4 cut(s)	25, 631, 730, 853
MaeI	CTAG	3 cut(s)	30, 1314, 1387
MaeII	ACGT	2 cut(s)	348, 510
MaeIII	GTNAC	4 cut(s)	334, 793, 896, 1157
MalI	GATC	2 cut(s)	943, 1149
MbiI	CCGCTC	1 cut(s)	1249
MboI	GATC	2 cut(s)	941, 1147
MhlI	GDGCHC	3 cut(s)	280, 318, 764
MluCI	AATT	7 cut(s)	4, 442, 700, 708, 826, 1001, 1253
Mly113I	GGCGCC	1 cut(s)	631
MlyI	GAGTC	5 cut(s)	236, 790, 1052, 1070, 1151
MmeI	TCCRAC	2 cut(s)	387, 1125
Mph1103I	ATGCAT	1 cut(s)	846
MreI	CGCCGGCG	1 cut(s)	560
MroI	TCCGGA	1 cut(s)	799
MroNI	GCCGGC	1 cut(s)	560
MroXI	GAANNNNTTC	1 cut(s)	398
MseI	TTAA	3 cut(s)	825, 912, 1256
MslI	CAYNNNNRTG	2 cut(s)	1155, 1206
MspA1I	CMGCKG	5 cut(s)	176, 195, 956, 990, 1027
MspI	CCGG	8 cut(s)	147, 454, 561, 638, 745, 749, 783, 800
MspR9I	CCNGG	4 cut(s)	638, 733, 783, 784
MvaI	CCWGG	1 cut(s)	733
MwoI	GCNNNNNNNGC	8 cut(s)	20, 26, 35, 189, 213, 504, 953, 1234
NaeI	GCCGGC	1 cut(s)	562
NarI	GGCGCC	1 cut(s)	631
NciI	CCSGG	3 cut(s)	638, 783, 784
NcoI	CCATGG	3 cut(s)	467, 755, 1078
NdeII	GATC	2 cut(s)	941, 1147
NgoMIV	GCCGGC	1 cut(s)	560
NlaIV	GGNNCC	7 cut(s)	165, 249, 632, 737, 753, 761, 1068
NmeAIII	GCCGAG	3 cut(s)	224, 366, 415
NmuCI	GTSAC	3 cut(s)	334, 793, 1157
NsiI	ATGCAT	1 cut(s)	846
NspI	RCATGY	2 cut(s)	322, 1276
NspV	TTCGAA	1 cut(s)	9
PaeI	GCATGC	1 cut(s)	1276
PaeR7I	CTCGAG	1 cut(s)	230
PagI	TCATGA	3 cut(s)	973, 1039, 1150
PceI	AGGCCT	1 cut(s)	1352
PciI	ACATGT	1 cut(s)	318
PcsI	WCGNNNNNNNCGW	2 cut(s)	330, 561
PdiI	GCCGGC	1 cut(s)	562
PdmI	GAANNNNTTC	1 cut(s)	398
PfeI	GAWTC	1 cut(s)	410
PflFI	GACNNNGTC	2 cut(s)	329, 569
PflMI	CCANNNNNTGG	2 cut(s)	67, 525
PfoI	TCCNGGA	1 cut(s)	731
PleI	GAGTC	5 cut(s)	236, 790, 1051, 1069, 1150
PluTI	GGCGCC	1 cut(s)	634
PpsI	GAGTC	5 cut(s)	236, 790, 1051, 1069, 1150
Ppu21I	YACGTR	1 cut(s)	511
PscI	ACATGT	1 cut(s)	318
PshBI	ATTAAT	1 cut(s)	825
Psp6I	CCWGG	1 cut(s)	731
PspFI	CCCAGC	1 cut(s)	1027
PspGI	CCWGG	1 cut(s)	731
PspN4I	GGNNCC	7 cut(s)	165, 249, 632, 737, 753, 761, 1068
PspPI	GGNCC	6 cut(s)	163, 247, 451, 802, 923, 1075
PspXI	VCTCGAGB	1 cut(s)	230
PsyI	GACNNNGTC	2 cut(s)	329, 569
PvuII	CAGCTG	2 cut(s)	195, 1027
RsaI	GTAC	4 cut(s)	398, 482, 1023, 1318
RsaNI	GTAC	4 cut(s)	397, 481, 1022, 1317
RseI	CAYNNNNRTG	2 cut(s)	1155, 1206
SaqAI	TTAA	3 cut(s)	825, 912, 1256
Sau3AI	GATC	2 cut(s)	941, 1147
Sau96I	GGNCC	6 cut(s)	163, 247, 451, 802, 923, 1075
ScaI	AGTACT	1 cut(s)	398
SchI	GAGTC	5 cut(s)	236, 790, 1052, 1070, 1151
ScrFI	CCNGG	4 cut(s)	638, 733, 783, 784
SduI	GDGCHC	3 cut(s)	280, 318, 764
SfaNI	GCATC	4 cut(s)	25, 631, 730, 853
SfoI	GGCGCC	1 cut(s)	632
Sfr274I	CTCGAG	1 cut(s)	230
SfuI	TTCGAA	1 cut(s)	9
SgrAI	CRCCGGYG	2 cut(s)	146, 560
SinI	GGWCC	4 cut(s)	163, 451, 802, 1075
SlaI	CTCGAG	1 cut(s)	230
SmaI	CCCGGG	1 cut(s)	784
SmiMI	CAYNNNNRTG	2 cut(s)	1155, 1206
SmlI	CTYRAG	2 cut(s)	230, 937
SmoI	CTYRAG	2 cut(s)	230, 937
SpeI	ACTAGT	1 cut(s)	1313
SphI	GCATGC	1 cut(s)	1276
Sse9I	AATT	7 cut(s)	4, 442, 700, 708, 826, 1001, 1253
SseBI	AGGCCT	1 cut(s)	1352
SspDI	GGCGCC	1 cut(s)	630
SspMI	CTAG	3 cut(s)	30, 1314, 1387
StuI	AGGCCT	1 cut(s)	1352
StyD4I	CCNGG	4 cut(s)	636, 731, 781, 782
StyI	CCWWGG	4 cut(s)	467, 755, 1078, 1371
TaaI	ACNGT	2 cut(s)	611, 969
TaiI	ACGT	2 cut(s)	351, 513
TaqI	TCGA	8 cut(s)	9, 231, 306, 324, 447, 555, 856, 1046
TasI	AATT	7 cut(s)	4, 442, 700, 708, 826, 1001, 1253
TatI	WGTACW	2 cut(s)	396, 1021
TauI	GCSGC	6 cut(s)	23, 192, 631, 636, 1091, 1231
TfiI	GAWTC	1 cut(s)	410
Tru1I	TTAA	3 cut(s)	825, 912, 1256
Tru9I	TTAA	3 cut(s)	825, 912, 1256
TscAI	CASTG	1 cut(s)	1077
TseFI	GTSAC	3 cut(s)	334, 793, 1157
TseI	GCWGC	9 cut(s)	14, 17, 192, 213, 498, 814, 817, 956, 1091
Tsp45I	GTSAC	3 cut(s)	334, 793, 1157
TspDTI	ATGAA	7 cut(s)	17, 102, 671, 939, 962, 1028, 1167
TspGWI	ACGGA	1 cut(s)	915
TspMI	CCCGGG	1 cut(s)	782
TspRI	CASTG	1 cut(s)	1077
Tth111I	GACNNNGTC	2 cut(s)	329, 569
Van91I	CCANNNNNTGG	2 cut(s)	67, 525
VpaK11BI	GGWCC	4 cut(s)	163, 451, 802, 1075
VspI	ATTAAT	1 cut(s)	825
XapI	RAATTY	3 cut(s)	4, 442, 1001
XceI	RCATGY	2 cut(s)	322, 1276
XhoI	CTCGAG	1 cut(s)	230
XmaI	CCCGGG	1 cut(s)	782
XmnI	GAANNNNTTC	1 cut(s)	398
XspI	CTAG	3 cut(s)	30, 1314, 1387
ZrmI	AGTACT	1 cut(s)	398
Zsp2I	ATGCAT	1 cut(s)	846

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.