Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0012359

Physical Location & Seq

Genomic Coordinates Reverse (-)

60174395 .. 60177004

Gene Structure 2610 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00267040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1344 bp

ATGAATTTCGGCGCATCTAGAGATGGAGGAGGAGGTTTTTCCGAGGATGAAATCAGAGGTAAGCTTCCCTTTTCGTCTTACTCTCCCACCTCTCCCTCTTCTTCTTCTTCTTCACCTCACTTCAACAACACTAGTACGGCAACAGCCACTCTTCTCCCGGGTGGTCTCAGCAGCTGGGATACTTACGGCGGCGGCGGAGGTCCAGACACGAGGCTGGAGCTGATGGACTCGTCGCCGCGAAACGCTGATAATAATCAAGAGTCGAACAATGAACCTCATACAACAGCAACAGTAGCGGCCATAGAGAAAGAGCACATGTTCGACAAAGTGGTGACGCCGAGCGATGTGGGGAAGCTGAACCGGCTGGTGATTCCGAAGCAGCACGCCGAGAAGTACTTCCCGCTGGACTCGTCCACCAACGAGAAGGGGCTGCTCCTTAATTTCGAGGACCGGACCGGGAAGGCGTGGCGGTTCAGGTACTCGTACTGGAACAGCAGCCAGAGCTACGTCATGACCAAAGGGTGGAGCCGTTTCGTGAAGGAGAAGAAGCTCGACGCCGGCGACATCGTGTCGTTTCAGCGCGGACTCGGTGAGTCTGGGAAGGACCGGCTCTACATTGACTGGAGGCGCCGCCCCGAAGTGGCCGACCCCAACCACCACCACGCGCTTCATCACCAGCATCACAATTTTGGAATTCCACCGCCGCATCATTACTCGTTCCACCGCTCGGTGCCTTGGAGTCCACTTCTAATGCGGCCACCTGGATCTTCGCCAACAATTGCACGCGAGCACCATTTACAGCAGATGAATTACAGCACGAACATTCATCCCTATCGGAACAGCAGCGCTGGCGGTGGCGGAGGTTATGGGTACGGAAACGTGGTGAACATGAATCCGGTCTGTTCGGGGCAGGTTTATTATCTGAGATCGGGTGGAGGAGGAGGATCAGTAATCCCACAGCAATTACATCAACAAGAGGGCAGTGCTACTACTCATGCTCATCATCATCATCATCATCAAGTGGGTCTGGGTCAGCTGGGTCGGGTTAATGTGGTCGAGCCCATGGTTCTGGAGTCGGTGCCTGTGGTCCATGGCAAGGTAGCAGCAGCAGGCAAGAGGCTGAGGCTGTTTGGAGTAAACATGGACTGCCCCGTATCCGATCAGTCGGACGAATGTGACATTTTGTCGTCATCAACTACTACTGCAATGGTTCTTTCGCAACAGCCTCATCAACCCCCACTTCAATTAAGGCTCTACGACGGCACGCCGGCCACCACCACCGACTTCTTCAACCGAGGCAAGACGTCTTCATCGTCCTCCATGTCCTTGGATTTCGATGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009791 GO:0009889 GO:0009908 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0022603 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0048366 GO:0048367 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0099402 GO:0140110 GO:1900618 GO:1901371 GO:1903506 GO:1905421 GO:2000024 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

447

Amino Acids

49.06

Weight (kDa)

7.17

Isoelectric Point (pI)

52.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	107 - 211	2.3e-26	B3 DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46870
fragaria_vesca	FvH4_5g10410
malus_domestica	MD06G1124400.v1.1 MD14G1141400.v1.1
prunus_persica	Prupe.5G134900_v2.0.a1
pyrus_communis	pycom06g11470 pycom14g11620
rosa_chinensis	RchiOBHm_Chr7g0187821
rosa_laevigata	RLG00000004754
rosa_multiflora	Rmu_co8399923.1_g000001 Rmu_sc0004483.1_g000041
rosa_roxburghii	Rroxscaffold_3G00267040
rosa_rugosa	Rorug06G0484500 Rorug06G0484600
rosa_samantha	Rh7AG089800 Rh7BG091400 Rh7CG090500 Rh7DG092200
rosa_wichuraiana	Rw7G007740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1307
Acc36I	ACCTGC	1 cut(s)	901
AccB1I	GGYRCC	3 cut(s)	627, 730, 1078
AccB7I	CCANNNNNTGG	1 cut(s)	522
AccBSI	CCGCTC	1 cut(s)	726
AccII	CGCG	4 cut(s)	238, 582, 665, 786
AclWI	GGATC	2 cut(s)	772, 952
AcoI	YGGCCR	4 cut(s)	297, 642, 755, 1269
AcsI	RAATTY	2 cut(s)	4, 693
AcyI	GRCGYC	4 cut(s)	335, 555, 628, 1304
AfaI	GTAC	5 cut(s)	136, 395, 479, 485, 872
AfeI	AGCGCT	1 cut(s)	847
AfiI	CCNNNNNNNGG	4 cut(s)	522, 640, 727, 1096
AflIII	ACRYGT	1 cut(s)	315
AgsI	TTSAA	3 cut(s)	124, 1244, 1291
AhdI	GACNNNNNGTC	2 cut(s)	568, 1183
AhlI	ACTAGT	1 cut(s)	131
AjnI	CCWGG	1 cut(s)	760
AluBI	AGCT	7 cut(s)	64, 174, 220, 355, 504, 550, 1036
AluI	AGCT	7 cut(s)	64, 174, 220, 355, 504, 550, 1036
Alw21I	GWGCWC	2 cut(s)	315, 792
Alw26I	GTCTC	1 cut(s)	170
AlwI	GGATC	2 cut(s)	772, 952
AlwNI	CAGNNNCTG	1 cut(s)	174
Ama87I	CYCGRG	1 cut(s)	157
Aor51HI	AGCGCT	1 cut(s)	847
AoxI	GGCC	4 cut(s)	297, 642, 755, 1269
ApeKI	GCWGC	7 cut(s)	171, 379, 430, 495, 843, 1103, 1106
ApoI	RAATTY	2 cut(s)	4, 693
Asp700I	GAANNNNTTC	1 cut(s)	395
AspLEI	GCGC	5 cut(s)	14, 582, 630, 667, 848
AspS9I	GGNCC	5 cut(s)	200, 448, 453, 604, 1087
AsuC2I	CCSGG	3 cut(s)	158, 159, 457
AsuHPI	GGTGA	6 cut(s)	105, 343, 379, 602, 665, 895
AvaI	CYCGRG	1 cut(s)	157
AvaII	GGWCC	5 cut(s)	200, 448, 453, 604, 1087
BanI	GGYRCC	3 cut(s)	627, 730, 1078
BanII	GRGCYC	1 cut(s)	1062
BauI	CACGAG	1 cut(s)	208
BbsI	GAAGAC	1 cut(s)	1299
Bbv12I	GWGCWC	2 cut(s)	315, 792
BbvCI	CCTCAGC	1 cut(s)	1121
BbvI	GCAGC	7 cut(s)	183, 391, 417, 507, 855, 1115, 1118
BccI	CCATC	2 cut(s)	17, 217
BceAI	ACGGC	4 cut(s)	153, 202, 513, 1276
BciT130I	CCWGG	1 cut(s)	762
BciVI	GTATCC	2 cut(s)	172, 1165
BcnI	CCSGG	3 cut(s)	158, 159, 457
BcoDI	GTCTC	1 cut(s)	170
BcuI	ACTAGT	1 cut(s)	131
BfaI	CTAG	2 cut(s)	18, 132
BfoI	RGCGCY	2 cut(s)	631, 849
BfuAI	ACCTGC	1 cut(s)	901
BfuI	GTATCC	2 cut(s)	172, 1165
BmcAI	AGTACT	1 cut(s)	395
Bme1390I	CCNGG	4 cut(s)	158, 159, 457, 762
Bme18I	GGWCC	5 cut(s)	200, 448, 453, 604, 1087
BmeRI	GACNNNNNGTC	2 cut(s)	568, 1183
BmeT110I	CYCGRG	1 cut(s)	157
BmgT120I	GGNCC	5 cut(s)	200, 448, 453, 604, 1087
BmiI	GGNNCC	4 cut(s)	527, 629, 732, 1080
BmrFI	CCNGG	4 cut(s)	158, 159, 457, 762
BmsI	GCATC	3 cut(s)	23, 688, 715
BpiI	GAAGAC	1 cut(s)	1299
BpmI	CTGGAG	3 cut(s)	236, 643, 1091
Bpu10I	CCTNAGC	1 cut(s)	1121
BpuMI	CCSGG	3 cut(s)	158, 159, 457
BsaBI	GATNNNNATC	1 cut(s)	252
BsaHI	GRCGYC	4 cut(s)	335, 555, 628, 1304
BsaI	GGTCTC	1 cut(s)	170
BsaJI	CCNNGG	7 cut(s)	42, 157, 734, 1062, 1090, 1294, 1326
BsaWI	WCCGGW	2 cut(s)	450, 895
BsaXI	ACNNNNNCTCC	2 cut(s)	933, 963
Bsc4I	CCNNNNNNNGG	4 cut(s)	522, 640, 727, 1096
Bse118I	RCCGGY	4 cut(s)	360, 557, 606, 1267
Bse1I	ACTGG	2 cut(s)	491, 626
Bse3DI	GCAATG	1 cut(s)	1212
Bse8I	GATNNNNATC	1 cut(s)	252
BseBI	CCWGG	1 cut(s)	762
BseDI	CCNNGG	7 cut(s)	42, 157, 734, 1062, 1090, 1294, 1326
BseGI	GGATG	2 cut(s)	52, 826
BseJI	GATNNNNATC	1 cut(s)	252
BseLI	CCNNNNNNNGG	4 cut(s)	522, 640, 727, 1096
BseMI	GCAATG	1 cut(s)	1212
BseMII	CTCAG	3 cut(s)	181, 914, 1112
BseNI	ACTGG	2 cut(s)	491, 626
BseRI	GAGGAG	4 cut(s)	42, 45, 951, 954
BseXI	GCAGC	7 cut(s)	183, 391, 417, 507, 855, 1115, 1118
BseYI	CCCAGC	2 cut(s)	174, 1036
Bsh1236I	CGCG	4 cut(s)	238, 582, 665, 786
BshFI	GGCC	4 cut(s)	299, 644, 757, 1271
BshNI	GGYRCC	3 cut(s)	627, 730, 1078
BsiHKAI	GWGCWC	2 cut(s)	315, 792
BsiHKCI	CYCGRG	1 cut(s)	157
BsiSI	CCGG	8 cut(s)	158, 361, 451, 456, 558, 607, 896, 1268
BslI	CCNNNNNNNGG	4 cut(s)	522, 640, 727, 1096
BsmAI	GTCTC	1 cut(s)	170
BsnI	GGCC	4 cut(s)	299, 644, 757, 1271
Bso31I	GGTCTC	1 cut(s)	170
BsoBI	CYCGRG	1 cut(s)	157
Bsp1286I	GDGCHC	3 cut(s)	315, 792, 1062
Bsp143I	GATC	4 cut(s)	764, 926, 944, 1159
Bsp19I	CCATGG	2 cut(s)	1062, 1090
BspANI	GGCC	4 cut(s)	299, 644, 757, 1271
BspCNI	CTCAG	3 cut(s)	180, 915, 1113
BspFNI	CGCG	4 cut(s)	238, 582, 665, 786
BspHI	TCATGA	1 cut(s)	510
BspLI	GGNNCC	4 cut(s)	527, 629, 732, 1080
BspMI	ACCTGC	1 cut(s)	901
BspPI	GGATC	2 cut(s)	772, 952
BspT107I	GGYRCC	3 cut(s)	627, 730, 1078
BspTNI	GGTCTC	1 cut(s)	170
BsrBI	CCGCTC	1 cut(s)	726
BsrDI	GCAATG	1 cut(s)	1212
BsrFI	RCCGGY	4 cut(s)	360, 557, 606, 1267
BsrI	ACTGG	2 cut(s)	491, 626
BssAI	RCCGGY	4 cut(s)	360, 557, 606, 1267
BssECI	CCNNGG	7 cut(s)	42, 157, 734, 1062, 1090, 1294, 1326
BssMI	GATC	4 cut(s)	764, 926, 944, 1159
BssNI	GRCGYC	4 cut(s)	335, 555, 628, 1304
BssSI	CACGAG	1 cut(s)	208
BssT1I	CCWWGG	4 cut(s)	734, 1062, 1090, 1326
Bst2BI	CACGAG	1 cut(s)	208
Bst2UI	CCWGG	1 cut(s)	762
Bst4CI	ACNGT	1 cut(s)	292
Bst6I	CTCTTC	2 cut(s)	103, 156
BstACI	GRCGYC	4 cut(s)	335, 555, 628, 1304
BstC8I	GCNNGC	8 cut(s)	384, 559, 784, 788, 850, 1111, 1265, 1269
BstDEI	CTNAG	3 cut(s)	167, 923, 1121
BstDSI	CCRYGG	2 cut(s)	1062, 1090
BstF5I	GGATG	2 cut(s)	52, 826
BstFNI	CGCG	4 cut(s)	238, 582, 665, 786
BstH2I	RGCGCY	2 cut(s)	631, 849
BstHHI	GCGC	5 cut(s)	14, 582, 630, 667, 848
BstKTI	GATC	4 cut(s)	767, 929, 947, 1162
BstMAI	GTCTC	1 cut(s)	170
BstMBI	GATC	4 cut(s)	764, 926, 944, 1159
BstMWI	GCNNNNNNNGC	4 cut(s)	293, 361, 501, 849
BstNI	CCWGG	1 cut(s)	762
BstNSI	RCATGY	1 cut(s)	319
BstSCI	CCNGG	4 cut(s)	156, 157, 455, 760
BstUI	CGCG	4 cut(s)	238, 582, 665, 786
BstV1I	GCAGC	7 cut(s)	183, 391, 417, 507, 855, 1115, 1118
BstV2I	GAAGAC	1 cut(s)	1299
BstX2I	RGATCY	1 cut(s)	764
BstXI	CCANNNNNNTGG	2 cut(s)	1069, 1327
BstYI	RGATCY	1 cut(s)	764
BsuI	GTATCC	2 cut(s)	172, 1165
BsuRI	GGCC	4 cut(s)	299, 644, 757, 1271
BtgI	CCRYGG	2 cut(s)	1062, 1090
BtgZI	GCGATG	1 cut(s)	357
BtsCI	GGATG	2 cut(s)	52, 826
BtsI	GCAGTG	1 cut(s)	988
BtsIMutI	CAGTG	1 cut(s)	988
BveI	ACCTGC	1 cut(s)	901
Cac8I	GCNNGC	8 cut(s)	384, 559, 784, 788, 850, 1111, 1265, 1269
CaiI	CAGNNNCTG	1 cut(s)	174
CciI	TCATGA	1 cut(s)	510
CfoI	GCGC	5 cut(s)	14, 582, 630, 667, 848
Cfr10I	RCCGGY	4 cut(s)	360, 557, 606, 1267
Cfr13I	GGNCC	5 cut(s)	200, 448, 453, 604, 1087
Cfr9I	CCCGGG	1 cut(s)	157
CpoI	CGGWCCG	1 cut(s)	453
CseI	GACGC	2 cut(s)	343, 563
Csp6I	GTAC	5 cut(s)	135, 394, 478, 484, 871
CspI	CGGWCCG	1 cut(s)	453
CviAII	CATG	8 cut(s)	316, 511, 889, 995, 1063, 1091, 1141, 1321
CviQI	GTAC	5 cut(s)	135, 394, 478, 484, 871
DdeI	CTNAG	3 cut(s)	167, 923, 1121
DinI	GGCGCC	1 cut(s)	629
DpnI	GATC	4 cut(s)	766, 928, 946, 1161
DpnII	GATC	4 cut(s)	764, 926, 944, 1159
DriI	GACNNNNNGTC	2 cut(s)	568, 1183
EaeI	YGGCCR	4 cut(s)	297, 642, 755, 1269
Eam1104I	CTCTTC	2 cut(s)	103, 156
Eam1105I	GACNNNNNGTC	2 cut(s)	568, 1183
EarI	CTCTTC	2 cut(s)	103, 156
EciI	GGCGGA	2 cut(s)	210, 873
Eco130I	CCWWGG	4 cut(s)	734, 1062, 1090, 1326
Eco24I	GRGCYC	1 cut(s)	1062
Eco31I	GGTCTC	1 cut(s)	170
Eco47I	GGWCC	5 cut(s)	200, 448, 453, 604, 1087
Eco47III	AGCGCT	1 cut(s)	847
Eco88I	CYCGRG	1 cut(s)	157
EcoRI	GAATTC	1 cut(s)	693
EcoRII	CCWGG	1 cut(s)	760
EcoT14I	CCWWGG	4 cut(s)	734, 1062, 1090, 1326
EcoT38I	GRGCYC	1 cut(s)	1062
EgeI	GGCGCC	1 cut(s)	629
EheI	GGCGCC	1 cut(s)	629
ErhI	CCWWGG	4 cut(s)	734, 1062, 1090, 1326
FaeI	CATG	8 cut(s)	319, 514, 892, 998, 1066, 1094, 1144, 1324
FalI	AAGNNNNNCTT	2 cut(s)	53, 85
FatI	CATG	8 cut(s)	315, 510, 888, 994, 1062, 1090, 1140, 1320
FauI	CCCGC	1 cut(s)	408
FokI	GGATG	2 cut(s)	59, 813
FriOI	GRGCYC	1 cut(s)	1062
FspBI	CTAG	2 cut(s)	18, 132
GlaI	GCGC	5 cut(s)	13, 581, 629, 666, 847
GsaI	CCCAGC	2 cut(s)	178, 1040
GsuI	CTGGAG	3 cut(s)	236, 643, 1091
HaeII	RGCGCY	2 cut(s)	631, 849
HaeIII	GGCC	4 cut(s)	299, 644, 757, 1271
HapII	CCGG	8 cut(s)	158, 361, 451, 456, 558, 607, 896, 1268
HgaI	GACGC	2 cut(s)	343, 563
HhaI	GCGC	5 cut(s)	14, 582, 630, 667, 848
Hin1I	GRCGYC	4 cut(s)	335, 555, 628, 1304
Hin1II	CATG	8 cut(s)	319, 514, 892, 998, 1066, 1094, 1144, 1324
Hin6I	GCGC	5 cut(s)	12, 580, 628, 665, 846
HinP1I	GCGC	5 cut(s)	12, 580, 628, 665, 846
HindIII	AAGCTT	1 cut(s)	62
HinfI	GANTC	9 cut(s)	227, 260, 370, 407, 585, 593, 739, 892, 1073
HpaII	CCGG	8 cut(s)	158, 361, 451, 456, 558, 607, 896, 1268
HphI	GGTGA	6 cut(s)	105, 343, 379, 602, 665, 895
Hpy166II	GTNNAC	4 cut(s)	414, 743, 886, 1138
Hpy188I	TCNGA	7 cut(s)	43, 56, 375, 837, 924, 1159, 1168
Hpy188III	TCNNGA	6 cut(s)	18, 203, 257, 511, 535, 1070
Hpy8I	GTNNAC	4 cut(s)	414, 743, 886, 1138
Hpy99I	CGWCG	3 cut(s)	235, 557, 1262
HpyAV	CCTTC	4 cut(s)	418, 454, 532, 595
HpyCH4III	ACNGT	1 cut(s)	292
HpyCH4IV	ACGT	3 cut(s)	507, 879, 1304
HpyCH4V	TGCA	2 cut(s)	782, 1205
HpyF10VI	GCNNNNNNNGC	4 cut(s)	293, 361, 501, 849
HpyF3I	CTNAG	3 cut(s)	167, 923, 1121
HpySE526I	ACGT	3 cut(s)	507, 879, 1304
Hsp92I	GRCGYC	4 cut(s)	335, 555, 628, 1304
Hsp92II	CATG	8 cut(s)	319, 514, 892, 998, 1066, 1094, 1144, 1324
HspAI	GCGC	5 cut(s)	12, 580, 628, 665, 846
KasI	GGCGCC	1 cut(s)	627
KroI	GCCGGC	2 cut(s)	557, 1267
KroNI	GCCGGC	2 cut(s)	559, 1269
Kzo9I	GATC	4 cut(s)	764, 926, 944, 1159
LmnI	GCTCC	3 cut(s)	217, 438, 525
Lsp1109I	GCAGC	7 cut(s)	183, 391, 417, 507, 855, 1115, 1118
LweI	GCATC	3 cut(s)	23, 688, 715
MaeI	CTAG	2 cut(s)	18, 132
MaeII	ACGT	3 cut(s)	507, 879, 1304
MaeIII	GTNAC	2 cut(s)	331, 1175
MalI	GATC	4 cut(s)	766, 928, 946, 1161
MbiI	CCGCTC	1 cut(s)	726
MboI	GATC	4 cut(s)	764, 926, 944, 1159
MfeI	CAATTG	1 cut(s)	777
MflI	RGATCY	1 cut(s)	764
MhlI	GDGCHC	3 cut(s)	315, 792, 1062
MluCI	AATT	8 cut(s)	4, 439, 685, 693, 777, 808, 962, 1244
Mly113I	GGCGCC	1 cut(s)	628
MlyI	GAGTC	7 cut(s)	221, 269, 401, 579, 602, 748, 1082
MmeI	TCCRAC	1 cut(s)	1146
MreI	CGCCGGCG	1 cut(s)	557
MroNI	GCCGGC	2 cut(s)	557, 1267
MroXI	GAANNNNTTC	1 cut(s)	395
MseI	TTAA	3 cut(s)	438, 1047, 1247
MspA1I	CMGCKG	3 cut(s)	174, 403, 1036
MspI	CCGG	8 cut(s)	158, 361, 451, 456, 558, 607, 896, 1268
MspR9I	CCNGG	4 cut(s)	158, 159, 457, 762
MunI	CAATTG	1 cut(s)	777
MvaI	CCWGG	1 cut(s)	762
MvnI	CGCG	4 cut(s)	238, 582, 665, 786
MwoI	GCNNNNNNNGC	4 cut(s)	293, 361, 501, 849
NaeI	GCCGGC	2 cut(s)	559, 1269
NarI	GGCGCC	1 cut(s)	628
NciI	CCSGG	3 cut(s)	158, 159, 457
NcoI	CCATGG	2 cut(s)	1062, 1090
NdeII	GATC	4 cut(s)	764, 926, 944, 1159
NgoMIV	GCCGGC	2 cut(s)	557, 1267
NlaIII	CATG	8 cut(s)	319, 514, 892, 998, 1066, 1094, 1144, 1324
NlaIV	GGNNCC	4 cut(s)	527, 629, 732, 1080
NmeAIII	GCCGAG	2 cut(s)	363, 412
NmuCI	GTSAC	2 cut(s)	331, 1175
NspI	RCATGY	1 cut(s)	319
PagI	TCATGA	1 cut(s)	510
PciI	ACATGT	1 cut(s)	315
PcsI	WCGNNNNNNNCGW	2 cut(s)	558, 1310
PdiI	GCCGGC	2 cut(s)	559, 1269
PdmI	GAANNNNTTC	1 cut(s)	395
PfeI	GAWTC	2 cut(s)	370, 892
PflMI	CCANNNNNTGG	1 cut(s)	522
PleI	GAGTC	7 cut(s)	221, 268, 401, 579, 601, 747, 1081
PluTI	GGCGCC	1 cut(s)	631
PpsI	GAGTC	7 cut(s)	221, 268, 401, 579, 601, 747, 1081
PscI	ACATGT	1 cut(s)	315
Psp6I	CCWGG	1 cut(s)	760
PspFI	CCCAGC	2 cut(s)	174, 1036
PspGI	CCWGG	1 cut(s)	760
PspN4I	GGNNCC	4 cut(s)	527, 629, 732, 1080
PspPI	GGNCC	5 cut(s)	200, 448, 453, 604, 1087
PstNI	CAGNNNCTG	1 cut(s)	174
PsuI	RGATCY	1 cut(s)	764
PvuII	CAGCTG	2 cut(s)	174, 1036
RsaI	GTAC	5 cut(s)	136, 395, 479, 485, 872
RsaNI	GTAC	5 cut(s)	135, 394, 478, 484, 871
Rsr2I	CGGWCCG	1 cut(s)	453
RsrII	CGGWCCG	1 cut(s)	453
SaqAI	TTAA	3 cut(s)	438, 1047, 1247
Sau3AI	GATC	4 cut(s)	764, 926, 944, 1159
Sau96I	GGNCC	5 cut(s)	200, 448, 453, 604, 1087
ScaI	AGTACT	1 cut(s)	395
SchI	GAGTC	7 cut(s)	221, 269, 401, 579, 602, 748, 1082
ScrFI	CCNGG	4 cut(s)	158, 159, 457, 762
SduI	GDGCHC	3 cut(s)	315, 792, 1062
SfaNI	GCATC	3 cut(s)	23, 688, 715
SfoI	GGCGCC	1 cut(s)	629
SgrAI	CRCCGGYG	1 cut(s)	557
SinI	GGWCC	5 cut(s)	200, 448, 453, 604, 1087
SmaI	CCCGGG	1 cut(s)	159
SpeI	ACTAGT	1 cut(s)	131
Sse9I	AATT	8 cut(s)	4, 439, 685, 693, 777, 808, 962, 1244
SspDI	GGCGCC	1 cut(s)	627
SspMI	CTAG	2 cut(s)	18, 132
StyD4I	CCNGG	4 cut(s)	156, 157, 455, 760
StyI	CCWWGG	4 cut(s)	734, 1062, 1090, 1326
TaaI	ACNGT	1 cut(s)	292
TaiI	ACGT	3 cut(s)	510, 882, 1307
TaqI	TCGA	6 cut(s)	263, 321, 444, 552, 1056, 1335
TasI	AATT	8 cut(s)	4, 439, 685, 693, 777, 808, 962, 1244
TatI	WGTACW	1 cut(s)	393
TauI	GCSGC	7 cut(s)	192, 195, 238, 299, 633, 706, 757
TfiI	GAWTC	2 cut(s)	370, 892
Tru1I	TTAA	3 cut(s)	438, 1047, 1247
Tru9I	TTAA	3 cut(s)	438, 1047, 1247
TscAI	CASTG	1 cut(s)	988
TseFI	GTSAC	2 cut(s)	331, 1175
TseI	GCWGC	7 cut(s)	171, 379, 430, 495, 843, 1103, 1106
Tsp45I	GTSAC	2 cut(s)	331, 1175
TspDTI	ATGAA	8 cut(s)	17, 63, 285, 659, 815, 821, 905, 1299
TspGWI	ACGGA	1 cut(s)	888
TspMI	CCCGGG	1 cut(s)	157
TspRI	CASTG	1 cut(s)	988
Van91I	CCANNNNNTGG	1 cut(s)	522
VpaK11BI	GGWCC	5 cut(s)	200, 448, 453, 604, 1087
XapI	RAATTY	2 cut(s)	4, 693
XbaI	TCTAGA	1 cut(s)	17
XceI	RCATGY	1 cut(s)	319
XmaI	CCCGGG	1 cut(s)	157
XmnI	GAANNNNTTC	1 cut(s)	395
XspI	CTAG	2 cut(s)	18, 132
ZraI	GACGTC	1 cut(s)	1305
ZrmI	AGTACT	1 cut(s)	395

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.