Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0006317

Physical Location & Seq

Genomic Coordinates Reverse (-)

287291 .. 293670

Gene Structure 6380 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1004900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2352 bp

ATGTTGTCATATGCTCGACATACCACTGCCCCTTTCATATACACGTCATCGTCTATAATAACACCGCCGCCTTCATCACCTCTAGTTCTCAAATCAATTCCATTTCCAATTCGTTCTCTCTCCTCCTCCTCCTCCTCCTCTCTCCCAAAACCTAGAAACACGAACGCAATGGGTTCCCTCCGTGCCCTAGACGTCCCCTTGCACTACCCTACCGCCCGCCGAGACGAGTCCGTCGTTGACGACTACCACGGCGTCAAGGTCGCCGATCCTTACAGATGGCTTGAGGATCCCGACTCCGAAGAGACGAAAGAGTTCGTACAGAAACAAGTAGAACTGACGCAGTCGGTTCTGAAGGAATGCGATACGAGAGGGCAGCTTGGGGAAAAGATCACCCAGCTTTTCGATCACCCGCGTTATGATCCACCTCTTAAGCGAGGGAATAAGTACTTCTACACCCACAACACTGGGCTTCAAGCCCAAAGTGTCCTCTACGTGCAGGATAGTTTGGATGGAAAAGCAGACGTGTTGCTTGATCCAAATACGCTTAGCGAAGATGGGACTGTTTCTTTGAACACTTATTCAATTAGTGAGGACGCCAAGTACTTGGCCTATGCCCTTAGTTCAAGTGGCAGTGATTGGGCAACGATTAAAGTGATGCGGGTTGAGGATAAGGCGGTCGAGCCTGAAACTATATCTTGGGTCAAGTTTTCGGATATTTGCTGGACACATGATCATAAAGGGTTTTTCTACAGCCGCTATCCAGCTCCAAAAGAAGGAGAAGATATTGATGCTGGGACAGAGACCAACACAAATCTTTATCACGAATTATACTATCATTTTGTGGGTACAGATCAATCAGAAGACATATTATGCTGGAGGGATTCTGAAAATCCTAAATACACGTTTGGAGCTGATGTTACAGTTGATGGGAAATATATTCTTCTGTATGTTGCGGAGGGTTGCGACCCAGTCAACAAATTTTATTACTGTGACATGTCTGCACTTCCTAATGGTCTTGAAGGTCTAAGGGGGAAAAACGATTTACTGCCAGTTATCAAGGTTATTGATAAATTTGATGCACGTGCAAATGATGAAACTGTGTTTACTCTTCTGACAAACAAGGATGCTCCAAAATATAAGTTGGTCCGAGTTGATCTGAAGGAACCAACTGTTTGGACTGACGTTCTCCCAGAATCTGAAAAAGATGTTCTTGAATCAGCGTCTGCTGTAAATGGTACCCAAATGATTGTTAGTTACTTGAGTGATGTGAAGTATGTTGTACAGGTAAGGGATTTGAAATCAGGTAACTTGCTGCATCAATTACCGATTGACATTGGATCGGTTAATGGGATTTCGGCAAGACGTGAAGACAGTACAGTTTTTTTTGGGTTTACAAGTTTTCTTACCCCTGGTATAATATATCAGTGTAATCTAGACAATGAAATTCCAGACTTGAAGGTATTTCGCGAAATTACGGTTCCTGGGTTTGAACGCTCAGAGTTCCATGTTGATCAGGTATTCGTTCCCAGTAAGGATGGCACTAAGATACCAACGTTTGTTGTGGCCAGAAAGAACATTAGTTTGGATGGATCACATCCATGCTTGCTATACGGATATGGTGGATTTAACATTAGTATTACGCCTTCATTCAGTGTTAGTCGTATTGTACTTACAAGGCATTTAGGTGTTGTTTACTGCATAGCCAATATCCGTGGGGGTGGAGAGTATGGTGAGGAATGGCATAAAGCAGGCTCCCTCTCTAAAAAGCAAAATTGCTTTGATGACTTCATTTCTGCAGCTGAATACCTTGTATCTGCCGGTTATACCCAACCGAGCAAGTTGTGTATTGAAGGTGGAAGTAATGGTGGACTGCTCGTTGGAGCTTGCATAAATCAGAGACCTGATCTTTTTGGTTGTGCACTGGCTCATGTTGGTGTTATGGATATGCTACGGTTCCACAAGTTTACCATAGGTCACGCCTGGACTTCTGATTATGGCTGCTCTGACAAGGAGGAAGAGTTCCGTTGGTTAATTAAGTACTCGCCTATACACAATGTTAGGAGACCATGGGAACAACATGCAAGCCAACCTCACCAATACCCATCTACCATGTTATTGACTGCGGATCATGATGACCGAGTTGTACCACTACACTCGTTGAAGTTATTGGCGACCTTGCAATATGTTCTGATCACAAGTTTGGAGAATAGCCCACAGACAAATCCGATTATTGGTCGCATTGAATGCAAGGCGGGGCATGGAGCTGGACGTCCAACCCAGAAAATGATTGACGAAGCTGCTGACCGGTATAGTTTCATGGCTAAGATGTTGGGTGCATCATGGATGGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0016787 GO:0019538 GO:0033218 GO:0042277 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04614 map04614

Pfam Domains

Protein Families

Peptidase_S9 Peptidase_S9_N

Protein Analysis

784

Amino Acids

87.65

Weight (kDa)

5.5

Isoelectric Point (pI)

43.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_S9_N	PF02897	70 - 482	5e-132	Prolyl oligopeptidase, N-terminal beta-propeller domain
Peptidase_S9	PF00326	548 - 778	2.9e-60	Prolyl oligopeptidase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006317)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20380 AT1G20380 AT1G76140 AT1G76140
fragaria_vesca	FvH4_2g37820 FvH4_2g37820 FvH4_2g37820 FvH4_2g37820
malus_domestica	MD08G1005500.v1.1 MD15G1004900.v1.1
prunus_persica	Prupe.1G357500_v2.0.a1 Prupe.1G357700_v2.0.a1 Prupe.1G357700_v2.0.a1 Prupe.1G357700_v2.0.a1
pyrus_communis	pycom15g00350
rosa_chinensis	RchiOBHm_Chr6g0303891
rosa_laevigata	RLG00000011037
rosa_multiflora	Rmu_sc0004644.1_g000008 Rmu_sc0007179.1_g000009
rosa_roxburghii	Rroxscaffold_5G00357480 Rroxscaffold_7G00164300
rosa_rugosa	Rorug06G0325600
rosa_samantha	Rh6AG439900 Rh6BG463100 Rh6CG452200 Rh6DG439100
rosa_wichuraiana	Rw6G038090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	230
AatII	GACGTC	2 cut(s)	195, 2272
Acc65I	GGTACC	1 cut(s)	1235
AccB1I	GGYRCC	1 cut(s)	1235
AccII	CGCG	2 cut(s)	412, 1467
AclI	AACGTT	1 cut(s)	1553
AclWI	GGATC	8 cut(s)	260, 281, 294, 413, 527, 1345, 1597, 2133
AcoI	YGGCCR	1 cut(s)	1563
AcsI	RAATTY	3 cut(s)	977, 1070, 1443
AcuI	CTGAAG	2 cut(s)	371, 1178
AcvI	CACGTG	1 cut(s)	1082
AcyI	GRCGYC	4 cut(s)	192, 252, 594, 2269
AfiI	CCNNNNNNNGG	2 cut(s)	773, 2231
AflII	CTTAAG	1 cut(s)	428
AflIII	ACRYGT	4 cut(s)	42, 522, 900, 993
AgeI	ACCGGT	1 cut(s)	2304
AjiI	CACGTC	3 cut(s)	45, 523, 1364
AjnI	CCWGG	3 cut(s)	1408, 1480, 1979
AjuI	GAANNNNNNNTTGG	2 cut(s)	1565, 1597
AloI	GAACNNNNNNTCC	2 cut(s)	2003, 2035
AluBI	AGCT	8 cut(s)	376, 397, 764, 911, 1799, 1883, 2264, 2297
AluI	AGCT	8 cut(s)	376, 397, 764, 911, 1799, 1883, 2264, 2297
Alw21I	GWGCWC	1 cut(s)	1921
Alw26I	GTCTC	5 cut(s)	216, 296, 794, 1891, 2056
Alw44I	GTGCAC	1 cut(s)	1917
AlwI	GGATC	8 cut(s)	260, 281, 294, 413, 527, 1345, 1597, 2133
AlwNI	CAGNNNCTG	2 cut(s)	1196, 1223
AoxI	GGCC	2 cut(s)	606, 1563
ApaLI	GTGCAC	1 cut(s)	1917
ApeKI	GCWGC	5 cut(s)	373, 1312, 1796, 1998, 2297
ApoI	RAATTY	3 cut(s)	977, 1070, 1443
ArsI	GACNNNNNNTTYG	2 cut(s)	550, 582
AsiGI	ACCGGT	1 cut(s)	2304
Asp700I	GAANNNNTTC	1 cut(s)	311
Asp718I	GGTACC	1 cut(s)	1235
AspS9I	GGNCC	1 cut(s)	1144
AsuHPI	GGTGA	5 cut(s)	69, 382, 398, 1742, 2084
AvaII	GGWCC	1 cut(s)	1144
BaeGI	GKGCMC	2 cut(s)	187, 1921
BaeI	ACNNNNGTAYC	2 cut(s)	1538, 1571
BalI	TGGCCA	1 cut(s)	1565
BamHI	GGATCC	1 cut(s)	286
BanI	GGYRCC	1 cut(s)	1235
BarI	GAAGNNNNNNTAC	2 cut(s)	1627, 1659
BbrPI	CACGTG	1 cut(s)	1082
BbsI	GAAGAC	2 cut(s)	867, 1374
Bbv12I	GWGCWC	1 cut(s)	1921
BbvI	GCAGC	5 cut(s)	385, 1299, 1808, 1985, 2284
BccI	CCATC	8 cut(s)	270, 503, 548, 920, 1529, 1580, 2110, 2338
BceAI	ACGGC	1 cut(s)	265
BciT130I	CCWGG	3 cut(s)	1410, 1482, 1981
BclI	TGATCA	3 cut(s)	730, 1510, 2190
BcoDI	GTCTC	5 cut(s)	216, 296, 794, 1891, 2056
BfaI	CTAG	4 cut(s)	83, 153, 188, 1433
BfmI	CTRYAG	2 cut(s)	748, 1794
BfrI	CTTAAG	1 cut(s)	428
BisI	GCNGC	7 cut(s)	68, 374, 754, 1313, 1797, 1999, 2298
BlpI	GCTNAGC	1 cut(s)	545
BlsI	GCNGC	7 cut(s)	69, 375, 755, 1314, 1798, 2000, 2299
BmcAI	AGTACT	3 cut(s)	446, 602, 2039
Bme1390I	CCNGG	3 cut(s)	1410, 1482, 1981
Bme18I	GGWCC	1 cut(s)	1144
BmgBI	CACGTC	3 cut(s)	45, 523, 1364
BmgT120I	GGNCC	1 cut(s)	1144
BmiI	GGNNCC	7 cut(s)	175, 288, 1164, 1237, 1479, 1753, 1955
BmrFI	CCNGG	3 cut(s)	1410, 1482, 1981
BmrI	ACTGGG	3 cut(s)	474, 962, 1521
BmsI	GCATC	6 cut(s)	645, 778, 1066, 1114, 1324, 2345
BmuI	ACTGGG	3 cut(s)	474, 962, 1521
BpiI	GAAGAC	2 cut(s)	867, 1374
BpmI	CTGGAG	1 cut(s)	895
Bpu1102I	GCTNAGC	1 cut(s)	545
BpuEI	CTTGAG	2 cut(s)	302, 1279
BsaAI	YACGTR	2 cut(s)	493, 1082
BsaHI	GRCGYC	4 cut(s)	192, 252, 594, 2269
BsaI	GGTCTC	3 cut(s)	794, 1891, 2056
BsaJI	CCNNGG	5 cut(s)	247, 1408, 1481, 1711, 2066
BsaWI	WCCGGW	1 cut(s)	2304
BsaXI	ACNNNNNCTCC	4 cut(s)	900, 930, 2003, 2033
Bsc4I	CCNNNNNNNGG	2 cut(s)	773, 2231
Bse118I	RCCGGY	2 cut(s)	1817, 2304
Bse1I	ACTGG	5 cut(s)	469, 968, 1049, 1527, 1926
Bse3DI	GCAATG	1 cut(s)	174
BseBI	CCWGG	3 cut(s)	1410, 1482, 1981
BseDI	CCNNGG	5 cut(s)	247, 1408, 1481, 1711, 2066
BseGI	GGATG	6 cut(s)	514, 1129, 1540, 1591, 1594, 2349
BseLI	CCNNNNNNNGG	2 cut(s)	773, 2231
BseMI	GCAATG	1 cut(s)	174
BseMII	CTCAG	1 cut(s)	1509
BseNI	ACTGG	5 cut(s)	469, 968, 1049, 1527, 1926
BseRI	GAGGAG	6 cut(s)	112, 115, 118, 121, 124, 127
BseSI	GKGCMC	2 cut(s)	187, 1921
BseXI	GCAGC	5 cut(s)	385, 1299, 1808, 1985, 2284
BseYI	CCCAGC	2 cut(s)	393, 791
BsgI	GTGCAG	2 cut(s)	515, 984
Bsh1236I	CGCG	2 cut(s)	412, 1467
Bsh1285I	CGRYCG	1 cut(s)	678
BshFI	GGCC	2 cut(s)	608, 1565
BshNI	GGYRCC	1 cut(s)	1235
BshTI	ACCGGT	1 cut(s)	2304
BsiEI	CGRYCG	1 cut(s)	678
BsiHKAI	GWGCWC	1 cut(s)	1921
BsiSI	CCGG	2 cut(s)	1818, 2305
BslFI	GGGAC	3 cut(s)	179, 571, 808
BslI	CCNNNNNNNGG	2 cut(s)	773, 2231
BsmAI	GTCTC	5 cut(s)	216, 296, 794, 1891, 2056
BsmBI	CGTCTC	2 cut(s)	216, 296
BsmFI	GGGAC	3 cut(s)	179, 571, 808
BsmI	GAATGC	2 cut(s)	362, 2249
BsnI	GGCC	2 cut(s)	608, 1565
Bso31I	GGTCTC	3 cut(s)	794, 1891, 2056
Bsp1286I	GDGCHC	2 cut(s)	187, 1921
Bsp1407I	TGTACA	1 cut(s)	1279
Bsp1720I	GCTNAGC	1 cut(s)	545
Bsp19I	CCATGG	1 cut(s)	2066
Bsp68I	TCGCGA	1 cut(s)	1467
BspANI	GGCC	2 cut(s)	608, 1565
BspCNI	CTCAG	1 cut(s)	1508
BspFNI	CGCG	2 cut(s)	412, 1467
BspHI	TCATGA	1 cut(s)	2128
BspLI	GGNNCC	7 cut(s)	175, 288, 1164, 1237, 1479, 1753, 1955
BspMAI	CTGCAG	1 cut(s)	1798
BspPI	GGATC	8 cut(s)	260, 281, 294, 413, 527, 1345, 1597, 2133
BspT107I	GGYRCC	1 cut(s)	1235
BspTI	CTTAAG	1 cut(s)	428
BspTNI	GGTCTC	3 cut(s)	794, 1891, 2056
BsrDI	GCAATG	1 cut(s)	174
BsrFI	RCCGGY	2 cut(s)	1817, 2304
BsrGI	TGTACA	1 cut(s)	1279
BsrI	ACTGG	5 cut(s)	469, 968, 1049, 1527, 1926
BssAI	RCCGGY	2 cut(s)	1817, 2304
BssECI	CCNNGG	5 cut(s)	247, 1408, 1481, 1711, 2066
BssNI	GRCGYC	4 cut(s)	192, 252, 594, 2269
BssT1I	CCWWGG	1 cut(s)	2066
Bst2UI	CCWGG	3 cut(s)	1410, 1482, 1981
Bst4CI	ACNGT	9 cut(s)	562, 922, 989, 1099, 1171, 1373, 1378, 1477, 1953
Bst6I	CTCTTC	3 cut(s)	294, 1113, 2010
BstACI	GRCGYC	4 cut(s)	192, 252, 594, 2269
BstAFI	CTTAAG	1 cut(s)	428
BstAPI	GCANNNNNTGC	1 cut(s)	2244
BstAUI	TGTACA	1 cut(s)	1279
BstBAI	YACGTR	2 cut(s)	493, 1082
BstC8I	GCNNGC	5 cut(s)	217, 1604, 1750, 1885, 2083
BstDEI	CTNAG	6 cut(s)	545, 617, 1025, 1495, 1542, 2322
BstDSI	CCRYGG	3 cut(s)	247, 1711, 2066
BstF5I	GGATG	6 cut(s)	514, 1129, 1540, 1591, 1594, 2349
BstFNI	CGCG	2 cut(s)	412, 1467
BstMAI	GTCTC	5 cut(s)	216, 296, 794, 1891, 2056
BstMCI	CGRYCG	1 cut(s)	678
BstMWI	GCNNNNNNNGC	1 cut(s)	2244
BstNI	CCWGG	3 cut(s)	1410, 1482, 1981
BstNSI	RCATGY	2 cut(s)	997, 2081
BstSCI	CCNGG	3 cut(s)	1408, 1480, 1979
BstSFI	CTRYAG	2 cut(s)	748, 1794
BstSLI	GKGCMC	2 cut(s)	187, 1921
BstUI	CGCG	2 cut(s)	412, 1467
BstV1I	GCAGC	5 cut(s)	385, 1299, 1808, 1985, 2284
BstV2I	GAAGAC	2 cut(s)	867, 1374
BstX2I	RGATCY	1 cut(s)	286
BstXI	CCANNNNNNTGG	3 cut(s)	464, 604, 1173
BstYI	RGATCY	1 cut(s)	286
BsuRI	GGCC	2 cut(s)	608, 1565
BtgI	CCRYGG	3 cut(s)	247, 1711, 2066
BtrI	CACGTC	3 cut(s)	45, 523, 1364
BtsCI	GGATG	6 cut(s)	514, 1129, 1540, 1591, 1594, 2349
BtsI	GCAGTG	2 cut(s)	24, 637
BtsIMutI	CAGTG	6 cut(s)	24, 462, 637, 1430, 1657, 1919
BtuMI	TCGCGA	1 cut(s)	1467
Cac8I	GCNNGC	5 cut(s)	217, 1604, 1750, 1885, 2083
CaiI	CAGNNNCTG	2 cut(s)	1196, 1223
CciI	TCATGA	1 cut(s)	2128
Cfr10I	RCCGGY	2 cut(s)	1817, 2304
Cfr13I	GGNCC	1 cut(s)	1144
CseI	GACGC	4 cut(s)	241, 346, 602, 1209
CspAI	ACCGGT	1 cut(s)	2304
CspCI	CAANNNNNGTGG	2 cut(s)	1693, 1728
DdeI	CTNAG	6 cut(s)	545, 617, 1025, 1495, 1542, 2322
DrdI	GACNNNNNNGTC	1 cut(s)	230
DseDI	GACNNNNNNGTC	1 cut(s)	230
EaeI	YGGCCR	1 cut(s)	1563
Eam1104I	CTCTTC	3 cut(s)	294, 1113, 2010
EarI	CTCTTC	3 cut(s)	294, 1113, 2010
Eco130I	CCWWGG	1 cut(s)	2066
Eco31I	GGTCTC	3 cut(s)	794, 1891, 2056
Eco47I	GGWCC	1 cut(s)	1144
Eco57I	CTGAAG	2 cut(s)	371, 1178
Eco72I	CACGTG	1 cut(s)	1082
EcoRII	CCWGG	3 cut(s)	1408, 1480, 1979
EcoT14I	CCWWGG	1 cut(s)	2066
ErhI	CCWWGG	1 cut(s)	2066
Esp3I	CGTCTC	2 cut(s)	216, 296
FalI	AAGNNNNNCTT	2 cut(s)	1194, 1226
FaqI	GGGAC	3 cut(s)	179, 571, 808
FauI	CCCGC	4 cut(s)	224, 417, 651, 2245
FauNDI	CATATG	1 cut(s)	10
FbaI	TGATCA	3 cut(s)	730, 1510, 2190
Fnu4HI	GCNGC	7 cut(s)	68, 374, 754, 1313, 1797, 1999, 2298
FokI	GGATG	5 cut(s)	521, 1136, 1547, 1581, 1598
Fsp4HI	GCNGC	7 cut(s)	68, 374, 754, 1313, 1797, 1999, 2298
FspBI	CTAG	4 cut(s)	83, 153, 188, 1433
GluI	GCNGC	7 cut(s)	68, 374, 754, 1313, 1797, 1999, 2298
GsaI	CCCAGC	2 cut(s)	397, 795
GsuI	CTGGAG	1 cut(s)	895
HaeIII	GGCC	2 cut(s)	608, 1565
HapII	CCGG	2 cut(s)	1818, 2305
HgaI	GACGC	4 cut(s)	241, 346, 602, 1209
Hin1I	GRCGYC	4 cut(s)	192, 252, 594, 2269
HincII	GTYRAC	2 cut(s)	238, 973
HindII	GTYRAC	2 cut(s)	238, 973
HinfI	GANTC	5 cut(s)	227, 293, 881, 1193, 1214
HpaII	CCGG	2 cut(s)	1818, 2305
HphI	GGTGA	5 cut(s)	69, 382, 398, 1742, 2084
Hpy166II	GTNNAC	8 cut(s)	238, 973, 1104, 1392, 1693, 1868, 1919, 1965
Hpy188III	TCNNGA	8 cut(s)	290, 821, 1016, 1211, 1433, 1448, 1466, 2129
Hpy8I	GTNNAC	8 cut(s)	238, 973, 1104, 1392, 1693, 1868, 1919, 1965
Hpy99I	CGWCG	1 cut(s)	236
HpyAV	CCTTC	8 cut(s)	81, 346, 767, 1013, 1153, 1450, 1653, 1844
HpyCH4III	ACNGT	9 cut(s)	562, 922, 989, 1099, 1171, 1373, 1378, 1477, 1953
HpyF10VI	GCNNNNNNNGC	1 cut(s)	2244
HpyF3I	CTNAG	6 cut(s)	545, 617, 1025, 1495, 1542, 2322
Hsp92I	GRCGYC	4 cut(s)	192, 252, 594, 2269
KpnI	GGTACC	1 cut(s)	1239
Ksp22I	TGATCA	3 cut(s)	730, 1510, 2190
LmnI	GCTCC	6 cut(s)	769, 908, 1132, 1757, 1880, 2261
Lsp1109I	GCAGC	5 cut(s)	385, 1299, 1808, 1985, 2284
LweI	GCATC	6 cut(s)	645, 778, 1066, 1114, 1324, 2345
MaeI	CTAG	4 cut(s)	83, 153, 188, 1433
MaeIII	GTNAC	5 cut(s)	916, 989, 1253, 1304, 1973
MboII	GAAGA	8 cut(s)	311, 563, 791, 872, 932, 1100, 1379, 2027
MflI	RGATCY	1 cut(s)	286
MhlI	GDGCHC	2 cut(s)	187, 1921
MlsI	TGGCCA	1 cut(s)	1565
MluNI	TGGCCA	1 cut(s)	1565
MlyI	GAGTC	2 cut(s)	236, 287
MmeI	TCCRAC	2 cut(s)	1858, 2297
Mox20I	TGGCCA	1 cut(s)	1565
MroXI	GAANNNNTTC	1 cut(s)	311
MscI	TGGCCA	1 cut(s)	1565
MseI	TTAA	6 cut(s)	429, 648, 1344, 1626, 2030, 2034
MslI	CAYNNNNRTG	3 cut(s)	1597, 1683, 1932
Msp20I	TGGCCA	1 cut(s)	1565
MspA1I	CMGCKG	1 cut(s)	1799
MspCI	CTTAAG	1 cut(s)	428
MspI	CCGG	2 cut(s)	1818, 2305
MspR9I	CCNGG	3 cut(s)	1410, 1482, 1981
Mva1269I	GAATGC	2 cut(s)	362, 2249
MvaI	CCWGG	3 cut(s)	1410, 1482, 1981
MvnI	CGCG	2 cut(s)	412, 1467
MwoI	GCNNNNNNNGC	1 cut(s)	2244
NcoI	CCATGG	1 cut(s)	2066
NdeI	CATATG	1 cut(s)	10
NlaIV	GGNNCC	7 cut(s)	175, 288, 1164, 1237, 1479, 1753, 1955
NmeAIII	GCCGAG	1 cut(s)	245
NmuCI	GTSAC	2 cut(s)	989, 1973
NruI	TCGCGA	1 cut(s)	1467
NspI	RCATGY	2 cut(s)	997, 2081
PacI	TTAATTAA	1 cut(s)	2034
PagI	TCATGA	1 cut(s)	2128
PciI	ACATGT	1 cut(s)	993
PcsI	WCGNNNNNNNCGW	1 cut(s)	231
PctI	GAATGC	2 cut(s)	362, 2249
PdmI	GAANNNNTTC	1 cut(s)	311
PfeI	GAWTC	3 cut(s)	881, 1193, 1214
PflFI	GACNNNGTC	2 cut(s)	340, 968
PinAI	ACCGGT	1 cut(s)	2304
PkrI	GCNGC	7 cut(s)	69, 375, 755, 1314, 1798, 2000, 2299
PleI	GAGTC	2 cut(s)	235, 287
PmaCI	CACGTG	1 cut(s)	1082
PmlI	CACGTG	1 cut(s)	1082
PpsI	GAGTC	2 cut(s)	235, 287
Ppu21I	YACGTR	2 cut(s)	493, 1082
PscI	ACATGT	1 cut(s)	993
Psp1406I	AACGTT	1 cut(s)	1553
Psp6I	CCWGG	3 cut(s)	1408, 1480, 1979
PspCI	CACGTG	1 cut(s)	1082
PspFI	CCCAGC	2 cut(s)	393, 791
PspGI	CCWGG	3 cut(s)	1408, 1480, 1979
PspN4I	GGNNCC	7 cut(s)	175, 288, 1164, 1237, 1479, 1753, 1955
PspPI	GGNCC	1 cut(s)	1144
PstI	CTGCAG	1 cut(s)	1798
PstNI	CAGNNNCTG	2 cut(s)	1196, 1223
PsuI	RGATCY	1 cut(s)	286
PsyI	GACNNNGTC	2 cut(s)	340, 968
PvuII	CAGCTG	1 cut(s)	1799
RruI	TCGCGA	1 cut(s)	1467
RseI	CAYNNNNRTG	3 cut(s)	1597, 1683, 1932
SaqAI	TTAA	6 cut(s)	429, 648, 1344, 1626, 2030, 2034
SatI	GCNGC	7 cut(s)	68, 374, 754, 1313, 1797, 1999, 2298
Sau96I	GGNCC	1 cut(s)	1144
ScaI	AGTACT	3 cut(s)	446, 602, 2039
SchI	GAGTC	2 cut(s)	236, 287
ScrFI	CCNGG	3 cut(s)	1410, 1482, 1981
SduI	GDGCHC	2 cut(s)	187, 1921
SfaNI	GCATC	6 cut(s)	645, 778, 1066, 1114, 1324, 2345
SfcI	CTRYAG	2 cut(s)	748, 1794
SinI	GGWCC	1 cut(s)	1144
SmiMI	CAYNNNNRTG	3 cut(s)	1597, 1683, 1932
SmlI	CTYRAG	3 cut(s)	281, 428, 1258
SmoI	CTYRAG	3 cut(s)	281, 428, 1258
SspMI	CTAG	4 cut(s)	83, 153, 188, 1433
StyD4I	CCNGG	3 cut(s)	1408, 1480, 1979
StyI	CCWWGG	1 cut(s)	2066
TaaI	ACNGT	9 cut(s)	562, 922, 989, 1099, 1171, 1373, 1378, 1477, 1953
TaqI	TCGA	3 cut(s)	16, 402, 678
TaqII	GACCGA	1 cut(s)	2151
TatI	WGTACW	6 cut(s)	444, 600, 1279, 1373, 1666, 2037
TauI	GCSGC	2 cut(s)	70, 756
TfiI	GAWTC	3 cut(s)	881, 1193, 1214
Tru1I	TTAA	6 cut(s)	429, 648, 1344, 1626, 2030, 2034
Tru9I	TTAA	6 cut(s)	429, 648, 1344, 1626, 2030, 2034
TscAI	CASTG	6 cut(s)	31, 469, 637, 1430, 1657, 1926
TseFI	GTSAC	2 cut(s)	989, 1973
TseI	GCWGC	5 cut(s)	373, 1312, 1796, 1998, 2297
Tsp45I	GTSAC	2 cut(s)	989, 1973
TspDTI	ATGAA	7 cut(s)	25, 63, 1107, 1455, 1635, 1777, 2305
TspGWI	ACGGA	5 cut(s)	170, 220, 1626, 1700, 2012
TspRI	CASTG	6 cut(s)	31, 469, 637, 1430, 1657, 1926
Tth111I	GACNNNGTC	2 cut(s)	340, 968
Vha464I	CTTAAG	1 cut(s)	428
VneI	GTGCAC	1 cut(s)	1917
VpaK11BI	GGWCC	1 cut(s)	1144
XapI	RAATTY	3 cut(s)	977, 1070, 1443
XbaI	TCTAGA	1 cut(s)	1432
XceI	RCATGY	2 cut(s)	997, 2081
XmnI	GAANNNNTTC	1 cut(s)	311
XspI	CTAG	4 cut(s)	83, 153, 188, 1433
ZraI	GACGTC	2 cut(s)	193, 2270
ZrmI	AGTACT	3 cut(s)	446, 602, 2039

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.