Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004644.1

Orthogroup ID

OG0006317

Physical Location & Seq

Genomic Coordinates Forward (+)

50817 .. 58020

Gene Structure 7204 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004644.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2856 bp

atggaaaaagcgctggaaagtggtcggaatagtggccggaagttgactggtgttgaccaaagggttgactgtctgatgacgtggctacttacgtggcaggatctggtgttgggcttgcttctcggctgcgtcagtgggttcaccaaactgggccaagttttcttcttctgggccgtgcggggttgcgctgccttacttttcggctcgtctgggacagaggaagaattaaggtggaagagtaggcgacggttcaaggtgcagcaggttcaggtggccggttcaggggtttttactccggttctaagatgcatatttcctgttccaggaatctggaatcaagggactgatgttgacaaaatacggtggtcaaaggttgacttcaaaggtgcgaaccaggcagggaaatttttgcttattctaatggccggtttagtgtttttcaggccggttatggactcctggagttgggagcttcaaggtgggagcggaggtttctgggatttgaaggttacgaatttagggtttcagggttatggattcgtgctgataacagtaccggagtgttgtcatagactcgtcacgcgcaccattatcccaaactctccccgctcctttttctatatttaccccgctgcccagagcatcccaccgcctcaaatcgacgctctcaaatcgtccccgccatctctctgcaatgctcgtcatcagtgcgtcgtcccaattttgattgtgcttttcgccggagaagaccgttcatcttctccaattgttcacggtggttatttactccgccgcagtcaacgccgaatgggatcccttggtgccctagacctacgtttgaagtaccctagcgtccgccgagatgagtccgtcgtcgatgactaccacggcgtcaaggttgccgatccttatagatggcttgaagatcctgattcggaagagacgaaggaatttgtacaaaaacaagtggaattgacgcagtcggtgctgaaggaatgcgatgatgtcagagggaagctatctgataaaatcaccaagctgtttgatcacccacgctatgatccaccttttcggcgagggggcaagtacttctactcccataacaccgggcttcaagctcaaaacgtcctctatgtgcaggatagtttggatggagaaccggaggttttgcttgatcctaatacacttagtgaagatgggacagtagctttgagtacatattcagtaagtgaggatgccaagtacttggcctatgcccttagtacaagtggcagtgactgggtaacaattaaagtgatgcgcgttgaggataagaaggtggagccagaaactttatcttgggtcaagttttctggaattagttggacacatgataacaaagggtttttctatagccgctatccagctccaaaagaaggagaggacattgacgctggcacagagaccaacgcaaatctttatcatgagttatactaccattttgtgggtacggatcaatcaaaagacatattatgctggaaagattctgaaaatcccaaatacttgtttggagccagtgttactgacgatgggaagtatgctcttatatatattgatgagggttgtgacccagtcaacaaattttactactgcgacatgtctgcacttcctaatgggcttgaaggtctgagggcgaaaaatgagctgcttccggttgttaagcttgttgatacatttgaggcacagtatcatgtgattgcaaatgatgacactgtctttactttgctgacaaataaagatgctccaaaatataagttggtccgagttgatctgaaggaaccaactgtttggactgatgtgattaaagaatctgaaaaagatgtacttgaatcggcatctgctgtaaatggtacccaaatgattgttagttacttgagtgatgtgaagtatgttctacagatcagggatttgaaatcgggtagcttggtgcatcaattgcccattgacattggctcagttactggaatttctgcaagacgtgaagatagtacaattttttttgcctttacaagctttgttacaccgggagtaatatatcagtgtaatttagacaatgaagttccagatatgaaggtatttcgcgaaattacagttcctgggtttgaacgctcagacttccatgttgatcaggtattcatacccagtaaggatggcactcagatacctatatttgttgtggccagaaagaacattattttggatggatcacacccttgtttgttatacggatatggtggatttaacattagtcttacaccatcattcagcgttagtcgcatggtacttacaagacatttaggtgttgtttactgcctagcaaatatccgtgggggtggagagtatggagaggaatggcataaggcaggctccctatcaaaaaagcaaaattgctttgatgacttcatttctgctggtgaataccttgtatctgctggttacacccaacctagcaagttgtgcatagaaggtggaagtaatggggggcttcttatcggggcttgcataaatcagaggcctgatctttttggttgtgcacttgctcatgttggtgtaatggacatgctgaggttccacaagtttaccataggtcatgcatggacttctgattatggatgttctgacaaggaggaagaattccgttggctaattaagtactcgcctctacacaacgtcaggagaccatgggaacaacatccaaaccaatgtcagcagtacccacctaccatgctattgactgcagatcatgatgaccgagttgtcccattacactcgttgaagttattggcggttagtctcttatttgcatggaagtcataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0016787 GO:0019538 GO:0033218 GO:0042277 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04614 map04614

Pfam Domains

Protein Families

Peptidase_S9 Peptidase_S9_N

Protein Analysis

951

Amino Acids

106.91

Weight (kDa)

5.98

Isoelectric Point (pI)

41.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006317)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20380 AT1G20380 AT1G76140 AT1G76140
fragaria_vesca	FvH4_2g37820 FvH4_2g37820 FvH4_2g37820 FvH4_2g37820
malus_domestica	MD08G1005500.v1.1 MD15G1004900.v1.1
prunus_persica	Prupe.1G357500_v2.0.a1 Prupe.1G357700_v2.0.a1 Prupe.1G357700_v2.0.a1 Prupe.1G357700_v2.0.a1
pyrus_communis	pycom15g00350
rosa_chinensis	RchiOBHm_Chr6g0303891
rosa_laevigata	RLG00000011037
rosa_multiflora	Rmu_sc0004644.1_g000008 Rmu_sc0007179.1_g000009
rosa_roxburghii	Rroxscaffold_5G00357480 Rroxscaffold_7G00164300
rosa_rugosa	Rorug06G0325600
rosa_samantha	Rh6AG439900 Rh6BG463100 Rh6CG452200 Rh6DG439100
rosa_wichuraiana	Rw6G038090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2795
Acc36I	ACCTGC	1 cut(s)	253
Acc65I	GGTACC	1 cut(s)	1889
AccB1I	GGYRCC	2 cut(s)	821, 1889
AccB7I	CCANNNNNTGG	1 cut(s)	1483
AccBSI	CCGCTC	2 cut(s)	486, 609
AccII	CGCG	3 cut(s)	583, 1302, 2121
AclWI	GGATC	9 cut(s)	108, 807, 820, 899, 920, 1055, 1169, 1500, 2251
AcoI	YGGCCR	4 cut(s)	34, 273, 423, 2217
AcsI	RAATTY	6 cut(s)	404, 514, 950, 1619, 2004, 2672
AcuI	CTGAAG	2 cut(s)	1010, 1832
AcyI	GRCGYC	1 cut(s)	891
AdeI	CACNNNGTG	1 cut(s)	1190
AfeI	AGCGCT	1 cut(s)	12
AfiI	CCNNNNNNNGG	5 cut(s)	282, 323, 465, 1415, 1483
AflIII	ACRYGT	1 cut(s)	1635
AjiI	CACGTC	2 cut(s)	81, 2018
AjnI	CCWGG	4 cut(s)	322, 393, 458, 2134
AjuI	GAANNNNNNNTTGG	2 cut(s)	2219, 2251
Alw21I	GWGCWC	1 cut(s)	2575
Alw26I	GTCTC	4 cut(s)	935, 1436, 2710, 2837
Alw44I	GTGCAC	1 cut(s)	2571
AlwI	GGATC	9 cut(s)	108, 807, 820, 899, 920, 1055, 1169, 1500, 2251
AlwNI	CAGNNNCTG	4 cut(s)	103, 1278, 2000, 2135
Aor51HI	AGCGCT	1 cut(s)	12
AoxI	GGCC	9 cut(s)	34, 151, 171, 273, 423, 443, 1248, 2217, 2552
ApaLI	GTGCAC	1 cut(s)	2571
ApeKI	GCWGC	5 cut(s)	126, 188, 259, 632, 1684
ApoI	RAATTY	6 cut(s)	404, 514, 950, 1619, 2004, 2672
ArsI	GACNNNNNNTTYG	2 cut(s)	1192, 1224
Asp718I	GGTACC	1 cut(s)	1889
AspLEI	GCGC	4 cut(s)	13, 188, 585, 1302
AspS9I	GGNCC	3 cut(s)	151, 171, 1798
AsuC2I	CCSGG	2 cut(s)	1108, 2064
AsuHPI	GGTGA	4 cut(s)	133, 1024, 1040, 2465
AvaII	GGWCC	1 cut(s)	1798
BaeGI	GKGCMC	2 cut(s)	826, 2575
BalI	TGGCCA	1 cut(s)	2219
BamHI	GGATCC	1 cut(s)	812
BanI	GGYRCC	2 cut(s)	821, 1889
BbsI	GAAGAC	1 cut(s)	753
Bbv12I	GWGCWC	1 cut(s)	2575
BbvCI	CCTCAGC	1 cut(s)	2603
BbvI	GCAGC	5 cut(s)	113, 175, 271, 619, 1671
BccI	CCATC	8 cut(s)	691, 909, 1145, 1190, 1562, 2183, 2234, 2305
BceAI	ACGGC	2 cut(s)	158, 904
BcgI	CGANNNNNNTGC	2 cut(s)	1622, 1656
BciT130I	CCWGG	4 cut(s)	324, 395, 460, 2136
BclI	TGATCA	2 cut(s)	1045, 2164
BcnI	CCSGG	2 cut(s)	1108, 2064
BcoDI	GTCTC	4 cut(s)	935, 1436, 2710, 2837
BfaI	CTAG	4 cut(s)	827, 849, 2354, 2487
BfmI	CTRYAG	3 cut(s)	1390, 1934, 2775
BfoI	RGCGCY	1 cut(s)	14
BfuAI	ACCTGC	1 cut(s)	253
BisI	GCNGC	7 cut(s)	127, 189, 260, 633, 793, 1396, 1685
BlsI	GCNGC	7 cut(s)	128, 190, 261, 634, 794, 1397, 1686
BmcAI	AGTACT	3 cut(s)	1088, 1244, 2693
Bme1390I	CCNGG	6 cut(s)	324, 395, 460, 1108, 2064, 2136
Bme18I	GGWCC	1 cut(s)	1798
BmgBI	CACGTC	2 cut(s)	81, 2018
BmgT120I	GGNCC	3 cut(s)	151, 171, 1798
BmiI	GGNNCC	8 cut(s)	814, 823, 1323, 1552, 1818, 1891, 2407, 2609
BmrFI	CCNGG	6 cut(s)	324, 395, 460, 1108, 2064, 2136
BmrI	ACTGGG	4 cut(s)	158, 1288, 1604, 2175
BmsI	GCATC	7 cut(s)	296, 651, 1225, 1287, 1768, 1883, 1978
BmuI	ACTGGG	4 cut(s)	158, 1288, 1604, 2175
BpiI	GAAGAC	1 cut(s)	753
BpmI	CTGGAG	1 cut(s)	481
Bpu10I	CCTNAGC	1 cut(s)	2603
BpuEI	CTTGAG	1 cut(s)	1933
BpuMI	CCSGG	2 cut(s)	1108, 2064
BsaAI	YACGTR	1 cut(s)	93
BsaHI	GRCGYC	1 cut(s)	891
BsaI	GGTCTC	2 cut(s)	1436, 2710
BsaJI	CCNNGG	5 cut(s)	817, 886, 2135, 2365, 2720
BsaWI	WCCGGW	4 cut(s)	295, 556, 1159, 1690
BsaXI	ACNNNNNCTCC	6 cut(s)	475, 505, 1079, 1109, 1542, 1572
Bsc4I	CCNNNNNNNGG	5 cut(s)	282, 323, 465, 1415, 1483
Bse118I	RCCGGY	3 cut(s)	275, 425, 445
Bse1I	ACTGG	7 cut(s)	52, 153, 1283, 1554, 1610, 2005, 2181
Bse3DI	GCAATG	1 cut(s)	700
BseBI	CCWGG	4 cut(s)	324, 395, 460, 2136
BseDI	CCNNGG	5 cut(s)	817, 886, 2135, 2365, 2720
BseGI	GGATG	7 cut(s)	642, 1156, 1240, 2194, 2245, 2657, 2731
BseLI	CCNNNNNNNGG	5 cut(s)	282, 323, 465, 1415, 1483
BseMI	GCAATG	1 cut(s)	700
BseMII	CTCAG	5 cut(s)	1658, 2007, 2163, 2210, 2594
BseNI	ACTGG	7 cut(s)	52, 153, 1283, 1554, 1610, 2005, 2181
BseSI	GKGCMC	2 cut(s)	826, 2575
BseXI	GCAGC	5 cut(s)	113, 175, 271, 619, 1671
BsgI	GTGCAG	3 cut(s)	278, 1157, 1626
Bsh1236I	CGCG	3 cut(s)	583, 1302, 2121
BshFI	GGCC	9 cut(s)	36, 153, 173, 275, 425, 445, 1250, 2219, 2554
BshNI	GGYRCC	2 cut(s)	821, 1889
BsiHKAI	GWGCWC	1 cut(s)	2575
BslFI	GGGAC	6 cut(s)	226, 355, 661, 701, 1213, 2783
BslI	CCNNNNNNNGG	5 cut(s)	282, 323, 465, 1415, 1483
BsmAI	GTCTC	4 cut(s)	935, 1436, 2710, 2837
BsmBI	CGTCTC	1 cut(s)	935
BsmFI	GGGAC	6 cut(s)	226, 355, 661, 701, 1213, 2783
BsmI	GAATGC	1 cut(s)	1001
BsnI	GGCC	9 cut(s)	36, 153, 173, 275, 425, 445, 1250, 2219, 2554
Bso31I	GGTCTC	2 cut(s)	1436, 2710
Bsp1286I	GDGCHC	2 cut(s)	826, 2575
Bsp1407I	TGTACA	1 cut(s)	955
Bsp19I	CCATGG	1 cut(s)	2720
Bsp68I	TCGCGA	1 cut(s)	2121
BspANI	GGCC	9 cut(s)	36, 153, 173, 275, 425, 445, 1250, 2219, 2554
BspCNI	CTCAG	5 cut(s)	1659, 2006, 2162, 2209, 2595
BspFNI	CGCG	3 cut(s)	583, 1302, 2121
BspHI	TCATGA	2 cut(s)	1462, 2782
BspLI	GGNNCC	8 cut(s)	814, 823, 1323, 1552, 1818, 1891, 2407, 2609
BspMAI	CTGCAG	1 cut(s)	2779
BspMI	ACCTGC	1 cut(s)	253
BspPI	GGATC	9 cut(s)	108, 807, 820, 899, 920, 1055, 1169, 1500, 2251
BspT107I	GGYRCC	2 cut(s)	821, 1889
BspTNI	GGTCTC	2 cut(s)	1436, 2710
BsrBI	CCGCTC	2 cut(s)	486, 609
BsrDI	GCAATG	1 cut(s)	700
BsrFI	RCCGGY	3 cut(s)	275, 425, 445
BsrGI	TGTACA	1 cut(s)	955
BsrI	ACTGG	7 cut(s)	52, 153, 1283, 1554, 1610, 2005, 2181
BssAI	RCCGGY	3 cut(s)	275, 425, 445
BssECI	CCNNGG	5 cut(s)	817, 886, 2135, 2365, 2720
BssNI	GRCGYC	1 cut(s)	891
BssT1I	CCWWGG	2 cut(s)	817, 2720
Bst2UI	CCWGG	4 cut(s)	324, 395, 460, 2136
Bst6I	CTCTTC	2 cut(s)	230, 933
BstACI	GRCGYC	1 cut(s)	891
BstAPI	GCANNNNNTGC	3 cut(s)	985, 1975, 2496
BstAUI	TGTACA	1 cut(s)	955
BstBAI	YACGTR	1 cut(s)	93
BstC8I	GCNNGC	4 cut(s)	116, 1435, 2404, 2539
BstDEI	CTNAG	8 cut(s)	302, 1187, 1259, 1667, 1993, 2149, 2196, 2603
BstDSI	CCRYGG	3 cut(s)	886, 2365, 2720
BstENI	CCTNNNNNAGG	1 cut(s)	321
BstF5I	GGATG	7 cut(s)	642, 1156, 1240, 2194, 2245, 2657, 2731
BstFNI	CGCG	3 cut(s)	583, 1302, 2121
BstH2I	RGCGCY	1 cut(s)	14
BstHHI	GCGC	4 cut(s)	13, 188, 585, 1302
BstMAI	GTCTC	4 cut(s)	935, 1436, 2710, 2837
BstMWI	GCNNNNNNNGC	6 cut(s)	395, 801, 985, 1975, 2313, 2496
BstNI	CCWGG	4 cut(s)	324, 395, 460, 2136
BstNSI	RCATGY	2 cut(s)	1639, 2602
BstSCI	CCNGG	6 cut(s)	322, 393, 458, 1106, 2062, 2134
BstSFI	CTRYAG	3 cut(s)	1390, 1934, 2775
BstSLI	GKGCMC	2 cut(s)	826, 2575
BstUI	CGCG	3 cut(s)	583, 1302, 2121
BstV1I	GCAGC	5 cut(s)	113, 175, 271, 619, 1671
BstV2I	GAAGAC	1 cut(s)	753
BstX2I	RGATCY	3 cut(s)	100, 812, 925
BstXI	CCANNNNNNTGG	3 cut(s)	330, 1246, 1827
BstYI	RGATCY	3 cut(s)	100, 812, 925
BsuRI	GGCC	9 cut(s)	36, 153, 173, 275, 425, 445, 1250, 2219, 2554
BtgI	CCRYGG	3 cut(s)	886, 2365, 2720
BtgZI	GCGATG	1 cut(s)	1014
BtrI	CACGTC	2 cut(s)	81, 2018
BtsCI	GGATG	7 cut(s)	642, 1156, 1240, 2194, 2245, 2657, 2731
BtsI	GCAGTG	1 cut(s)	1279
BtsIMutI	CAGTG	6 cut(s)	139, 713, 1279, 1561, 1749, 2084
BtuMI	TCGCGA	1 cut(s)	2121
BveI	ACCTGC	1 cut(s)	253
Cac8I	GCNNGC	4 cut(s)	116, 1435, 2404, 2539
CaiI	CAGNNNCTG	4 cut(s)	103, 1278, 2000, 2135
CciI	TCATGA	2 cut(s)	1462, 2782
CfoI	GCGC	4 cut(s)	13, 188, 585, 1302
Cfr10I	RCCGGY	3 cut(s)	275, 425, 445
Cfr13I	GGNCC	3 cut(s)	151, 171, 1798
CseI	GACGC	7 cut(s)	118, 671, 700, 841, 880, 985, 1439
DdeI	CTNAG	8 cut(s)	302, 1187, 1259, 1667, 1993, 2149, 2196, 2603
DraIII	CACNNNGTG	1 cut(s)	1190
DrdI	GACNNNNNNGTC	1 cut(s)	2795
DseDI	GACNNNNNNGTC	1 cut(s)	2795
EaeI	YGGCCR	4 cut(s)	34, 273, 423, 2217
Eam1104I	CTCTTC	2 cut(s)	230, 933
EarI	CTCTTC	2 cut(s)	230, 933
EciI	GGCGGA	2 cut(s)	779, 845
Eco130I	CCWWGG	2 cut(s)	817, 2720
Eco147I	AGGCCT	1 cut(s)	2554
Eco31I	GGTCTC	2 cut(s)	1436, 2710
Eco47I	GGWCC	1 cut(s)	1798
Eco47III	AGCGCT	1 cut(s)	12
Eco57I	CTGAAG	2 cut(s)	1010, 1832
EcoNI	CCTNNNNNAGG	1 cut(s)	321
EcoRI	GAATTC	1 cut(s)	2672
EcoRII	CCWGG	4 cut(s)	322, 393, 458, 2134
EcoT14I	CCWWGG	2 cut(s)	817, 2720
EcoT22I	ATGCAT	2 cut(s)	311, 2635
ErhI	CCWWGG	2 cut(s)	817, 2720
Esp3I	CGTCTC	1 cut(s)	935
FalI	AAGNNNNNCTT	4 cut(s)	362, 394, 1848, 1880
FaqI	GGGAC	6 cut(s)	226, 355, 661, 701, 1213, 2783
FauI	CCCGC	4 cut(s)	171, 614, 637, 687
FbaI	TGATCA	2 cut(s)	1045, 2164
Fnu4HI	GCNGC	7 cut(s)	127, 189, 260, 633, 793, 1396, 1685
FokI	GGATG	7 cut(s)	629, 1163, 1247, 2201, 2252, 2664, 2718
Fsp4HI	GCNGC	7 cut(s)	127, 189, 260, 633, 793, 1396, 1685
FspBI	CTAG	4 cut(s)	827, 849, 2354, 2487
GlaI	GCGC	4 cut(s)	12, 187, 584, 1301
GluI	GCNGC	7 cut(s)	127, 189, 260, 633, 793, 1396, 1685
GsuI	CTGGAG	1 cut(s)	481
HaeII	RGCGCY	1 cut(s)	14
HaeIII	GGCC	9 cut(s)	36, 153, 173, 275, 425, 445, 1250, 2219, 2554
HgaI	GACGC	7 cut(s)	118, 671, 700, 841, 880, 985, 1439
HhaI	GCGC	4 cut(s)	13, 188, 585, 1302
Hin1I	GRCGYC	1 cut(s)	891
Hin6I	GCGC	4 cut(s)	11, 186, 583, 1300
HinP1I	GCGC	4 cut(s)	11, 186, 583, 1300
HincII	GTYRAC	7 cut(s)	45, 55, 67, 352, 376, 800, 1615
HindII	GTYRAC	7 cut(s)	45, 55, 67, 352, 376, 800, 1615
HindIII	AAGCTT	2 cut(s)	1700, 2050
HphI	GGTGA	4 cut(s)	133, 1024, 1040, 2465
Hpy188III	TCNNGA	8 cut(s)	331, 929, 1353, 1463, 2102, 2120, 2713, 2783
Hpy99I	CGWCG	5 cut(s)	249, 665, 716, 875, 878
HpyAV	CCTTC	9 cut(s)	499, 940, 985, 1309, 1409, 1655, 1807, 2104, 2498
HpyCH4IV	ACGT	6 cut(s)	80, 92, 835, 1125, 2017, 2709
HpyF10VI	GCNNNNNNNGC	6 cut(s)	395, 801, 985, 1975, 2313, 2496
HpyF3I	CTNAG	8 cut(s)	302, 1187, 1259, 1667, 1993, 2149, 2196, 2603
HpySE526I	ACGT	6 cut(s)	80, 92, 835, 1125, 2017, 2709
Hsp92I	GRCGYC	1 cut(s)	891
HspAI	GCGC	4 cut(s)	11, 186, 583, 1300
KpnI	GGTACC	1 cut(s)	1893
Ksp22I	TGATCA	2 cut(s)	1045, 2164
LmnI	GCTCC	8 cut(s)	469, 483, 614, 1321, 1411, 1550, 1786, 2411
Lsp1109I	GCAGC	5 cut(s)	113, 175, 271, 619, 1671
LweI	GCATC	7 cut(s)	296, 651, 1225, 1287, 1768, 1883, 1978
MaeI	CTAG	4 cut(s)	827, 849, 2354, 2487
MaeII	ACGT	6 cut(s)	80, 92, 835, 1125, 2017, 2709
MbiI	CCGCTC	2 cut(s)	486, 609
MfeI	CAATTG	2 cut(s)	765, 1973
MflI	RGATCY	3 cut(s)	100, 812, 925
MhlI	GDGCHC	2 cut(s)	826, 2575
MlsI	TGGCCA	1 cut(s)	2219
MluNI	TGGCCA	1 cut(s)	2219
MlyI	GAGTC	3 cut(s)	449, 567, 875
MmeI	TCCRAC	2 cut(s)	5, 1343
Mox20I	TGGCCA	1 cut(s)	2219
Mph1103I	ATGCAT	2 cut(s)	311, 2635
MscI	TGGCCA	1 cut(s)	2219
MseI	TTAA	6 cut(s)	227, 1290, 1698, 1842, 2280, 2688
MslI	CAYNNNNRTG	2 cut(s)	2337, 2586
Msp20I	TGGCCA	1 cut(s)	2219
MspA1I	CMGCKG	1 cut(s)	632
MspR9I	CCNGG	6 cut(s)	324, 395, 460, 1108, 2064, 2136
MunI	CAATTG	2 cut(s)	765, 1973
Mva1269I	GAATGC	1 cut(s)	1001
MvaI	CCWGG	4 cut(s)	324, 395, 460, 2136
MvnI	CGCG	3 cut(s)	583, 1302, 2121
MwoI	GCNNNNNNNGC	6 cut(s)	395, 801, 985, 1975, 2313, 2496
NciI	CCSGG	2 cut(s)	1108, 2064
NcoI	CCATGG	1 cut(s)	2720
NlaIV	GGNNCC	8 cut(s)	814, 823, 1323, 1552, 1818, 1891, 2407, 2609
NmeAIII	GCCGAG	2 cut(s)	102, 884
NmuCI	GTSAC	3 cut(s)	577, 1274, 1604
NruI	TCGCGA	1 cut(s)	2121
NsiI	ATGCAT	2 cut(s)	311, 2635
NspI	RCATGY	2 cut(s)	1639, 2602
PagI	TCATGA	2 cut(s)	1462, 2782
PceI	AGGCCT	1 cut(s)	2554
PciI	ACATGT	1 cut(s)	1635
PcsI	WCGNNNNNNNCGW	1 cut(s)	941
PctI	GAATGC	1 cut(s)	1001
PfeI	GAWTC	7 cut(s)	327, 334, 537, 932, 1523, 1847, 1868
PflFI	GACNNNGTC	3 cut(s)	979, 1610, 1751
PflMI	CCANNNNNTGG	1 cut(s)	1483
PfoI	TCCNGGA	2 cut(s)	322, 458
PkrI	GCNGC	7 cut(s)	128, 190, 261, 634, 794, 1397, 1686
PleI	GAGTC	3 cut(s)	449, 567, 874
PpsI	GAGTC	3 cut(s)	449, 567, 874
Ppu21I	YACGTR	1 cut(s)	93
PscI	ACATGT	1 cut(s)	1635
Psp6I	CCWGG	4 cut(s)	322, 393, 458, 2134
PspGI	CCWGG	4 cut(s)	322, 393, 458, 2134
PspN4I	GGNNCC	8 cut(s)	814, 823, 1323, 1552, 1818, 1891, 2407, 2609
PspPI	GGNCC	3 cut(s)	151, 171, 1798
PstI	CTGCAG	1 cut(s)	2779
PstNI	CAGNNNCTG	4 cut(s)	103, 1278, 2000, 2135
PsuI	RGATCY	3 cut(s)	100, 812, 925
PsyI	GACNNNGTC	3 cut(s)	979, 1610, 1751
RruI	TCGCGA	1 cut(s)	2121
RseI	CAYNNNNRTG	2 cut(s)	2337, 2586
SaqAI	TTAA	6 cut(s)	227, 1290, 1698, 1842, 2280, 2688
SatI	GCNGC	7 cut(s)	127, 189, 260, 633, 793, 1396, 1685
Sau96I	GGNCC	3 cut(s)	151, 171, 1798
ScaI	AGTACT	3 cut(s)	1088, 1244, 2693
SchI	GAGTC	3 cut(s)	449, 567, 875
ScrFI	CCNGG	6 cut(s)	324, 395, 460, 1108, 2064, 2136
SduI	GDGCHC	2 cut(s)	826, 2575
SfaNI	GCATC	7 cut(s)	296, 651, 1225, 1287, 1768, 1883, 1978
SfcI	CTRYAG	3 cut(s)	1390, 1934, 2775
SinI	GGWCC	1 cut(s)	1798
SmiMI	CAYNNNNRTG	2 cut(s)	2337, 2586
SmlI	CTYRAG	1 cut(s)	1912
SmoI	CTYRAG	1 cut(s)	1912
SseBI	AGGCCT	1 cut(s)	2554
SspMI	CTAG	4 cut(s)	827, 849, 2354, 2487
StuI	AGGCCT	1 cut(s)	2554
StyD4I	CCNGG	6 cut(s)	322, 393, 458, 1106, 2062, 2134
StyI	CCWWGG	2 cut(s)	817, 2720
TaiI	ACGT	6 cut(s)	83, 95, 838, 1128, 2020, 2712
TaqI	TCGA	2 cut(s)	660, 876
TaqII	GACCGA	1 cut(s)	2805
TatI	WGTACW	8 cut(s)	955, 1086, 1214, 1242, 1262, 1861, 2027, 2691
TauI	GCSGC	2 cut(s)	795, 1398
TfiI	GAWTC	7 cut(s)	327, 334, 537, 932, 1523, 1847, 1868
Tru1I	TTAA	6 cut(s)	227, 1290, 1698, 1842, 2280, 2688
Tru9I	TTAA	6 cut(s)	227, 1290, 1698, 1842, 2280, 2688
TscAI	CASTG	6 cut(s)	139, 713, 1279, 1561, 1756, 2084
TseFI	GTSAC	3 cut(s)	577, 1274, 1604
TseI	GCWGC	5 cut(s)	126, 188, 259, 632, 1684
Tsp45I	GTSAC	3 cut(s)	577, 1274, 1604
TspDTI	ATGAA	5 cut(s)	744, 2109, 2123, 2164, 2431
TspGWI	ACGGA	5 cut(s)	859, 1505, 2280, 2354, 2666
TspRI	CASTG	6 cut(s)	139, 713, 1279, 1561, 1756, 2084
Tth111I	GACNNNGTC	3 cut(s)	979, 1610, 1751
Van91I	CCANNNNNTGG	1 cut(s)	1483
VneI	GTGCAC	1 cut(s)	2571
VpaK11BI	GGWCC	1 cut(s)	1798
XagI	CCTNNNNNAGG	1 cut(s)	321
XapI	RAATTY	6 cut(s)	404, 514, 950, 1619, 2004, 2672
XceI	RCATGY	2 cut(s)	1639, 2602
XspI	CTAG	4 cut(s)	827, 849, 2354, 2487
ZrmI	AGTACT	3 cut(s)	1088, 1244, 2693
Zsp2I	ATGCAT	2 cut(s)	311, 2635

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.