Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007179.1

Orthogroup ID

OG0006317

Physical Location & Seq

Genomic Coordinates Forward (+)

51209 .. 58014

Gene Structure 6806 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007179.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2574 bp

atggaaaaagcgcaggaaagtggtcggaatagtggccggaagttgactggtgttgaccagagggatctggtgttgggcttgcttctctgctgcgtcagtggattcaccaaactgggccaagttttcttcttctgggccgtgcggggttgccctgccttgcttttcggctcgtctgggacagaggaagaattaaggtggaagagtaggcgacggttcaaggtgcagcaggttcaggtggccggttcaggggtttttactctggttctgggatgcatatttcctgtttctggaatctggaatcaagggactgatgttgacaaaatacggtggccggttatggactcctggagttgggagcagaggtttctgggatttgaaggttacgaatttagggtttcaggagtaccggagtgttgtcatagactcgtcacgcgcaccattatcccaaactctccccgctcctttttctatatttaccccgctgcccagagcatcccaccgcctcaaatcgacgctctcaaatcgtccccgccatctctctgcaatgctcgtcatcagtgcgtcgtcccaattttgattgtgcttttcgccggagaagaccgttcatcttctccaattgttcacggtggttatttactccgccgcagtcaacgccgaatgggatcccttggtgccctagacctacgtttgaagtaccctagcgtccgccgagatgagtccgtcgtcgatgactaccacggcgtcaaggttgccgatccttatagatggcttgaagatcctgattcggaagagacgaaggaatttgtacaaaaacaagtggaattgacgcagtcggtgctgaaggaatgcgatgatgtcagagggaagctatctgataaaatcaccaagctgtttgatcacccacgctatgatccaccttttcggcgagggggcaagtacttctactcccataacaccgggcttcaagctcaaaacgtcctctatgtgcaggatagtttggatggagaaccggaggttttgcttgatcctaatacacttagtgaagatgggacagtagctttgagtacatattcagtaagtgaggatgccaagtacttggcctatgcccttagtacaagtggcagtgactgggtaacaattaaagtgatgcgcgttgaggataagaaggtggagccagaaactttatcttgggtcaagttttctggaattagttggacacatgataacaaagggtttttctatagccgctatccagctccaaaagaaggagaggacattgacgctggcacagagaccaacgcaaatctttatcatgagttatactaccattttgtgggtacggatcaatcaaaagacatattatgctggaaagattctgaaaatcccaaatacttgtttggagccagtgttactgatgatgggaagtatgctcttatatatattgatgagggttgtgacccagtcaacaaattttactactgcaacatgtctgcacttcctaatgggcttgaaggtctgagggcgaaaaatgagctgcttccggttgttaagcttgttgatacatttgaggcacagtatcatgtgattgcaaatgatgacactgtctttactttgctgacaaataaagatgctccaaaatataagttggtccgagttgatctgaaggaaccaactgtttggactgatgtgattaaagaatctgaaaaagatgtacttgaatcggcatctgctgtaaatggtacccaaatgattgttagttacttgagtgatgtgaagtatgttctacagatcagggatttgaaatcgggtagcttggtgcatcaattgcccattgacattggctcagttactggaatttctgcaagacgtgaagatagtacaattttttttgcctttacaagctttgttacaccgggagtaatatatcagtgtaatttagacaatgaagttccagatatgaaggtatttcgcgaaattacagttcctgggtttgaacgctcagacttccatgttgatcaggtattcatacccagtaaggatggcactcagatacctatatttgttgtggccagaaagaacattattttggatggatcacacccttgtttgttatacggatatggtggatttaacattagtcttacaccatcattcagcgttagtcgcatggtacttacaagacatttaggtgttgtttactgcctagcaaatatccgtgggggtggagagtatggagaggaatggcataaggcaggctccctatcaaaaaagcaaaattgctttgatgacttcatttctgctggtgaataccttgtatctgctggttacacccaacctagcaagttgtgcatagaaggtggaagtaatggggggcttcttatcggggcttgcataaatcagaggcctgatctttttggttgtgcacttgctcatgttggtgtaatggacatgctgaggttccacaagtttaccatagggcatggagctggacgtccgacacagaaaatgattgatgaagctgctgaccggtttagtttcatggctaagatgttgggtgcatcatggatagaataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0016787 GO:0019538 GO:0033218 GO:0042277 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04614 map04614

Pfam Domains

Protein Families

Peptidase_S9 Peptidase_S9_N

Protein Analysis

857

Amino Acids

95.99

Weight (kDa)

5.8

Isoelectric Point (pI)

42.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006317)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20380 AT1G20380 AT1G76140 AT1G76140
fragaria_vesca	FvH4_2g37820 FvH4_2g37820 FvH4_2g37820 FvH4_2g37820
malus_domestica	MD08G1005500.v1.1 MD15G1004900.v1.1
prunus_persica	Prupe.1G357500_v2.0.a1 Prupe.1G357700_v2.0.a1 Prupe.1G357700_v2.0.a1 Prupe.1G357700_v2.0.a1
pyrus_communis	pycom15g00350
rosa_chinensis	RchiOBHm_Chr6g0303891
rosa_laevigata	RLG00000011037
rosa_multiflora	Rmu_sc0004644.1_g000008 Rmu_sc0007179.1_g000009
rosa_roxburghii	Rroxscaffold_5G00357480 Rroxscaffold_7G00164300
rosa_rugosa	Rorug06G0325600
rosa_samantha	Rh6AG439900 Rh6BG463100 Rh6CG452200 Rh6DG439100
rosa_wichuraiana	Rw6G038090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2494
Acc36I	ACCTGC	1 cut(s)	217
Acc65I	GGTACC	1 cut(s)	1739
AccB1I	GGYRCC	2 cut(s)	671, 1739
AccB7I	CCANNNNNTGG	1 cut(s)	1333
AccBSI	CCGCTC	1 cut(s)	459
AccII	CGCG	3 cut(s)	433, 1152, 1971
AciI	CCGC	9 cut(s)	142, 457, 480, 500, 530, 640, 643, 706, 1246
AclWI	GGATC	9 cut(s)	72, 657, 670, 749, 770, 905, 1019, 1350, 2101
AcoI	YGGCCR	4 cut(s)	34, 237, 329, 2067
AcsI	RAATTY	4 cut(s)	386, 800, 1469, 1854
AcuI	CTGAAG	2 cut(s)	860, 1682
AcyI	GRCGYC	2 cut(s)	741, 2491
AdeI	CACNNNGTG	1 cut(s)	1040
AfiI	CCNNNNNNNGG	5 cut(s)	246, 287, 351, 1265, 1333
AflIII	ACRYGT	1 cut(s)	1485
AgeI	ACCGGT	1 cut(s)	2526
AgsI	TTSAA	9 cut(s)	217, 377, 691, 773, 965, 1511, 1718, 1801, 1994
AjiI	CACGTC	1 cut(s)	1868
AjnI	CCWGG	2 cut(s)	344, 1984
AjuI	GAANNNNNNNTTGG	2 cut(s)	2069, 2101
Alw21I	GWGCWC	1 cut(s)	2425
Alw26I	GTCTC	2 cut(s)	785, 1286
Alw44I	GTGCAC	1 cut(s)	2421
AlwI	GGATC	9 cut(s)	72, 657, 670, 749, 770, 905, 1019, 1350, 2101
AlwNI	CAGNNNCTG	3 cut(s)	1128, 1850, 1985
AoxI	GGCC	8 cut(s)	34, 115, 135, 237, 329, 1098, 2067, 2402
ApaLI	GTGCAC	1 cut(s)	2421
ApeKI	GCWGC	5 cut(s)	90, 223, 482, 1534, 2519
ApoI	RAATTY	4 cut(s)	386, 800, 1469, 1854
ArsI	GACNNNNNNTTYG	2 cut(s)	1042, 1074
AsiGI	ACCGGT	1 cut(s)	2526
Asp718I	GGTACC	1 cut(s)	1739
AspLEI	GCGC	3 cut(s)	13, 435, 1152
AspS9I	GGNCC	3 cut(s)	115, 135, 1648
AsuC2I	CCSGG	2 cut(s)	958, 1914
AsuHPI	GGTGA	4 cut(s)	97, 874, 890, 2315
AvaII	GGWCC	1 cut(s)	1648
BaeGI	GKGCMC	2 cut(s)	676, 2425
BalI	TGGCCA	1 cut(s)	2069
BamHI	GGATCC	1 cut(s)	662
BanI	GGYRCC	2 cut(s)	671, 1739
BbsI	GAAGAC	1 cut(s)	603
Bbv12I	GWGCWC	1 cut(s)	2425
BbvCI	CCTCAGC	1 cut(s)	2453
BbvI	GCAGC	5 cut(s)	77, 235, 469, 1521, 2506
BccI	CCATC	8 cut(s)	541, 759, 995, 1040, 1412, 2033, 2084, 2155
BceAI	ACGGC	2 cut(s)	122, 754
BciT130I	CCWGG	2 cut(s)	346, 1986
BclI	TGATCA	2 cut(s)	895, 2014
BcnI	CCSGG	2 cut(s)	958, 1914
BcoDI	GTCTC	2 cut(s)	785, 1286
BfaI	CTAG	4 cut(s)	677, 699, 2204, 2337
BfmI	CTRYAG	2 cut(s)	1240, 1784
BfuAI	ACCTGC	1 cut(s)	217
BisI	GCNGC	7 cut(s)	91, 224, 483, 643, 1246, 1535, 2520
BlsI	GCNGC	7 cut(s)	92, 225, 484, 644, 1247, 1536, 2521
BmcAI	AGTACT	2 cut(s)	938, 1094
Bme1390I	CCNGG	4 cut(s)	346, 958, 1914, 1986
Bme18I	GGWCC	1 cut(s)	1648
BmgBI	CACGTC	1 cut(s)	1868
BmgT120I	GGNCC	3 cut(s)	115, 135, 1648
BmiI	GGNNCC	8 cut(s)	664, 673, 1173, 1402, 1668, 1741, 2257, 2459
BmrFI	CCNGG	4 cut(s)	346, 958, 1914, 1986
BmrI	ACTGGG	4 cut(s)	122, 1138, 1454, 2025
BmsI	GCATC	8 cut(s)	260, 501, 1075, 1137, 1618, 1733, 1828, 2567
BmuI	ACTGGG	4 cut(s)	122, 1138, 1454, 2025
BpiI	GAAGAC	1 cut(s)	603
BpmI	CTGGAG	1 cut(s)	367
Bpu10I	CCTNAGC	1 cut(s)	2453
BpuEI	CTTGAG	1 cut(s)	1783
BpuMI	CCSGG	2 cut(s)	958, 1914
BsaHI	GRCGYC	2 cut(s)	741, 2491
BsaI	GGTCTC	1 cut(s)	1286
BsaJI	CCNNGG	4 cut(s)	667, 736, 1985, 2215
BsaWI	WCCGGW	4 cut(s)	406, 1009, 1540, 2526
BsaXI	ACNNNNNCTCC	6 cut(s)	347, 377, 929, 959, 1392, 1422
Bsc4I	CCNNNNNNNGG	5 cut(s)	246, 287, 351, 1265, 1333
Bse118I	RCCGGY	3 cut(s)	239, 331, 2526
Bse1I	ACTGG	7 cut(s)	52, 117, 1133, 1404, 1460, 1855, 2031
Bse3DI	GCAATG	1 cut(s)	550
BseBI	CCWGG	2 cut(s)	346, 1986
BseDI	CCNNGG	4 cut(s)	667, 736, 1985, 2215
BseGI	GGATG	6 cut(s)	275, 492, 1006, 1090, 2044, 2095
BseLI	CCNNNNNNNGG	5 cut(s)	246, 287, 351, 1265, 1333
BseMI	GCAATG	1 cut(s)	550
BseMII	CTCAG	5 cut(s)	1508, 1857, 2013, 2060, 2444
BseNI	ACTGG	7 cut(s)	52, 117, 1133, 1404, 1460, 1855, 2031
BseSI	GKGCMC	2 cut(s)	676, 2425
BseXI	GCAGC	5 cut(s)	77, 235, 469, 1521, 2506
BsgI	GTGCAG	3 cut(s)	242, 1007, 1476
Bsh1236I	CGCG	3 cut(s)	433, 1152, 1971
BshFI	GGCC	8 cut(s)	36, 117, 137, 239, 331, 1100, 2069, 2404
BshNI	GGYRCC	2 cut(s)	671, 1739
BshTI	ACCGGT	1 cut(s)	2526
BsiHKAI	GWGCWC	1 cut(s)	2425
BslFI	GGGAC	5 cut(s)	190, 319, 511, 551, 1063
BslI	CCNNNNNNNGG	5 cut(s)	246, 287, 351, 1265, 1333
BsmAI	GTCTC	2 cut(s)	785, 1286
BsmBI	CGTCTC	1 cut(s)	785
BsmFI	GGGAC	5 cut(s)	190, 319, 511, 551, 1063
BsmI	GAATGC	1 cut(s)	851
BsnI	GGCC	8 cut(s)	36, 117, 137, 239, 331, 1100, 2069, 2404
Bso31I	GGTCTC	1 cut(s)	1286
Bsp1286I	GDGCHC	2 cut(s)	676, 2425
Bsp1407I	TGTACA	1 cut(s)	805
Bsp68I	TCGCGA	1 cut(s)	1971
BspACI	CCGC	9 cut(s)	142, 457, 480, 500, 530, 640, 643, 706, 1246
BspANI	GGCC	8 cut(s)	36, 117, 137, 239, 331, 1100, 2069, 2404
BspCNI	CTCAG	5 cut(s)	1509, 1856, 2012, 2059, 2445
BspFNI	CGCG	3 cut(s)	433, 1152, 1971
BspHI	TCATGA	1 cut(s)	1312
BspLI	GGNNCC	8 cut(s)	664, 673, 1173, 1402, 1668, 1741, 2257, 2459
BspMI	ACCTGC	1 cut(s)	217
BspPI	GGATC	9 cut(s)	72, 657, 670, 749, 770, 905, 1019, 1350, 2101
BspT107I	GGYRCC	2 cut(s)	671, 1739
BspTNI	GGTCTC	1 cut(s)	1286
BsrBI	CCGCTC	1 cut(s)	459
BsrDI	GCAATG	1 cut(s)	550
BsrFI	RCCGGY	3 cut(s)	239, 331, 2526
BsrGI	TGTACA	1 cut(s)	805
BsrI	ACTGG	7 cut(s)	52, 117, 1133, 1404, 1460, 1855, 2031
BssAI	RCCGGY	3 cut(s)	239, 331, 2526
BssECI	CCNNGG	4 cut(s)	667, 736, 1985, 2215
BssNI	GRCGYC	2 cut(s)	741, 2491
BssT1I	CCWWGG	1 cut(s)	667
Bst2UI	CCWGG	2 cut(s)	346, 1986
Bst4CI	ACNGT	9 cut(s)	213, 327, 602, 626, 1054, 1575, 1603, 1675, 1981
Bst6I	CTCTTC	2 cut(s)	194, 783
BstACI	GRCGYC	2 cut(s)	741, 2491
BstAPI	GCANNNNNTGC	3 cut(s)	835, 1825, 2346
BstAUI	TGTACA	1 cut(s)	805
BstC8I	GCNNGC	4 cut(s)	80, 1285, 2254, 2389
BstDEI	CTNAG	8 cut(s)	1037, 1109, 1517, 1843, 1999, 2046, 2453, 2544
BstDSI	CCRYGG	2 cut(s)	736, 2215
BstF5I	GGATG	6 cut(s)	275, 492, 1006, 1090, 2044, 2095
BstFNI	CGCG	3 cut(s)	433, 1152, 1971
BstHHI	GCGC	3 cut(s)	13, 435, 1152
BstMAI	GTCTC	2 cut(s)	785, 1286
BstMWI	GCNNNNNNNGC	5 cut(s)	651, 835, 1825, 2163, 2346
BstNI	CCWGG	2 cut(s)	346, 1986
BstNSI	RCATGY	2 cut(s)	1489, 2452
BstSCI	CCNGG	4 cut(s)	344, 956, 1912, 1984
BstSFI	CTRYAG	2 cut(s)	1240, 1784
BstSLI	GKGCMC	2 cut(s)	676, 2425
BstUI	CGCG	3 cut(s)	433, 1152, 1971
BstV1I	GCAGC	5 cut(s)	77, 235, 469, 1521, 2506
BstV2I	GAAGAC	1 cut(s)	603
BstX2I	RGATCY	3 cut(s)	64, 662, 775
BstXI	CCANNNNNNTGG	2 cut(s)	1096, 1677
BstYI	RGATCY	3 cut(s)	64, 662, 775
BsuRI	GGCC	8 cut(s)	36, 117, 137, 239, 331, 1100, 2069, 2404
BtgI	CCRYGG	2 cut(s)	736, 2215
BtgZI	GCGATG	1 cut(s)	864
BtrI	CACGTC	1 cut(s)	1868
BtsCI	GGATG	6 cut(s)	275, 492, 1006, 1090, 2044, 2095
BtsI	GCAGTG	1 cut(s)	1129
BtsIMutI	CAGTG	6 cut(s)	103, 563, 1129, 1411, 1599, 1934
BtuMI	TCGCGA	1 cut(s)	1971
BveI	ACCTGC	1 cut(s)	217
Cac8I	GCNNGC	4 cut(s)	80, 1285, 2254, 2389
CaiI	CAGNNNCTG	3 cut(s)	1128, 1850, 1985
CciI	TCATGA	1 cut(s)	1312
CfoI	GCGC	3 cut(s)	13, 435, 1152
Cfr10I	RCCGGY	3 cut(s)	239, 331, 2526
Cfr13I	GGNCC	3 cut(s)	115, 135, 1648
CseI	GACGC	7 cut(s)	82, 521, 550, 691, 730, 835, 1289
CspAI	ACCGGT	1 cut(s)	2526
DdeI	CTNAG	8 cut(s)	1037, 1109, 1517, 1843, 1999, 2046, 2453, 2544
DraIII	CACNNNGTG	1 cut(s)	1040
EaeI	YGGCCR	4 cut(s)	34, 237, 329, 2067
Eam1104I	CTCTTC	2 cut(s)	194, 783
EarI	CTCTTC	2 cut(s)	194, 783
EciI	GGCGGA	2 cut(s)	629, 695
Eco130I	CCWWGG	1 cut(s)	667
Eco147I	AGGCCT	1 cut(s)	2404
Eco31I	GGTCTC	1 cut(s)	1286
Eco47I	GGWCC	1 cut(s)	1648
Eco57I	CTGAAG	2 cut(s)	860, 1682
EcoRII	CCWGG	2 cut(s)	344, 1984
EcoT14I	CCWWGG	1 cut(s)	667
EcoT22I	ATGCAT	1 cut(s)	275
ErhI	CCWWGG	1 cut(s)	667
Esp3I	CGTCTC	1 cut(s)	785
FalI	AAGNNNNNCTT	2 cut(s)	1698, 1730
FaqI	GGGAC	5 cut(s)	190, 319, 511, 551, 1063
FauI	CCCGC	4 cut(s)	135, 464, 487, 537
FbaI	TGATCA	2 cut(s)	895, 2014
Fnu4HI	GCNGC	7 cut(s)	91, 224, 483, 643, 1246, 1535, 2520
FokI	GGATG	6 cut(s)	282, 479, 1013, 1097, 2051, 2102
Fsp4HI	GCNGC	7 cut(s)	91, 224, 483, 643, 1246, 1535, 2520
FspBI	CTAG	4 cut(s)	677, 699, 2204, 2337
GlaI	GCGC	3 cut(s)	12, 434, 1151
GluI	GCNGC	7 cut(s)	91, 224, 483, 643, 1246, 1535, 2520
GsuI	CTGGAG	1 cut(s)	367
HaeIII	GGCC	8 cut(s)	36, 117, 137, 239, 331, 1100, 2069, 2404
HgaI	GACGC	7 cut(s)	82, 521, 550, 691, 730, 835, 1289
HhaI	GCGC	3 cut(s)	13, 435, 1152
Hin1I	GRCGYC	2 cut(s)	741, 2491
Hin6I	GCGC	3 cut(s)	11, 433, 1150
HinP1I	GCGC	3 cut(s)	11, 433, 1150
HincII	GTYRAC	5 cut(s)	45, 55, 316, 650, 1465
HindII	GTYRAC	5 cut(s)	45, 55, 316, 650, 1465
HindIII	AAGCTT	2 cut(s)	1550, 1900
HphI	GGTGA	4 cut(s)	97, 874, 890, 2315
Hpy166II	GTNNAC	9 cut(s)	45, 55, 316, 622, 650, 1465, 2197, 2423, 2469
Hpy188III	TCNNGA	8 cut(s)	288, 295, 399, 779, 1203, 1313, 1952, 1970
Hpy8I	GTNNAC	9 cut(s)	45, 55, 316, 622, 650, 1465, 2197, 2423, 2469
Hpy99I	CGWCG	5 cut(s)	213, 515, 566, 725, 728
HpyAV	CCTTC	9 cut(s)	371, 790, 835, 1159, 1259, 1505, 1657, 1954, 2348
HpyCH4III	ACNGT	9 cut(s)	213, 327, 602, 626, 1054, 1575, 1603, 1675, 1981
HpyCH4IV	ACGT	4 cut(s)	685, 975, 1867, 2491
HpyF10VI	GCNNNNNNNGC	5 cut(s)	651, 835, 1825, 2163, 2346
HpyF3I	CTNAG	8 cut(s)	1037, 1109, 1517, 1843, 1999, 2046, 2453, 2544
HpySE526I	ACGT	4 cut(s)	685, 975, 1867, 2491
Hsp92I	GRCGYC	2 cut(s)	741, 2491
HspAI	GCGC	3 cut(s)	11, 433, 1150
KpnI	GGTACC	1 cut(s)	1743
Ksp22I	TGATCA	2 cut(s)	895, 2014
LmnI	GCTCC	8 cut(s)	355, 464, 1171, 1261, 1400, 1636, 2261, 2483
Lsp1109I	GCAGC	5 cut(s)	77, 235, 469, 1521, 2506
LweI	GCATC	8 cut(s)	260, 501, 1075, 1137, 1618, 1733, 1828, 2567
MaeI	CTAG	4 cut(s)	677, 699, 2204, 2337
MaeII	ACGT	4 cut(s)	685, 975, 1867, 2491
MbiI	CCGCTC	1 cut(s)	459
MfeI	CAATTG	2 cut(s)	615, 1823
MflI	RGATCY	3 cut(s)	64, 662, 775
MhlI	GDGCHC	2 cut(s)	676, 2425
MlsI	TGGCCA	1 cut(s)	2069
MluNI	TGGCCA	1 cut(s)	2069
MlyI	GAGTC	3 cut(s)	335, 417, 725
MmeI	TCCRAC	3 cut(s)	5, 1193, 2519
Mox20I	TGGCCA	1 cut(s)	2069
Mph1103I	ATGCAT	1 cut(s)	275
MscI	TGGCCA	1 cut(s)	2069
MseI	TTAA	5 cut(s)	191, 1140, 1548, 1692, 2130
MslI	CAYNNNNRTG	2 cut(s)	2187, 2436
Msp20I	TGGCCA	1 cut(s)	2069
MspA1I	CMGCKG	1 cut(s)	482
MspR9I	CCNGG	4 cut(s)	346, 958, 1914, 1986
MunI	CAATTG	2 cut(s)	615, 1823
Mva1269I	GAATGC	1 cut(s)	851
MvaI	CCWGG	2 cut(s)	346, 1986
MvnI	CGCG	3 cut(s)	433, 1152, 1971
MwoI	GCNNNNNNNGC	5 cut(s)	651, 835, 1825, 2163, 2346
NciI	CCSGG	2 cut(s)	958, 1914
NlaIV	GGNNCC	8 cut(s)	664, 673, 1173, 1402, 1668, 1741, 2257, 2459
NmeAIII	GCCGAG	1 cut(s)	734
NmuCI	GTSAC	3 cut(s)	427, 1124, 1454
NruI	TCGCGA	1 cut(s)	1971
NsiI	ATGCAT	1 cut(s)	275
NspI	RCATGY	2 cut(s)	1489, 2452
PagI	TCATGA	1 cut(s)	1312
PceI	AGGCCT	1 cut(s)	2404
PciI	ACATGT	1 cut(s)	1485
PcsI	WCGNNNNNNNCGW	1 cut(s)	791
PctI	GAATGC	1 cut(s)	851
PfeI	GAWTC	7 cut(s)	102, 291, 298, 782, 1373, 1697, 1718
PflFI	GACNNNGTC	3 cut(s)	829, 1460, 1601
PflMI	CCANNNNNTGG	1 cut(s)	1333
PfoI	TCCNGGA	1 cut(s)	344
PinAI	ACCGGT	1 cut(s)	2526
PkrI	GCNGC	7 cut(s)	92, 225, 484, 644, 1247, 1536, 2521
PleI	GAGTC	3 cut(s)	335, 417, 724
PpsI	GAGTC	3 cut(s)	335, 417, 724
PscI	ACATGT	1 cut(s)	1485
Psp6I	CCWGG	2 cut(s)	344, 1984
PspGI	CCWGG	2 cut(s)	344, 1984
PspN4I	GGNNCC	8 cut(s)	664, 673, 1173, 1402, 1668, 1741, 2257, 2459
PspPI	GGNCC	3 cut(s)	115, 135, 1648
PstNI	CAGNNNCTG	3 cut(s)	1128, 1850, 1985
PsuI	RGATCY	3 cut(s)	64, 662, 775
PsyI	GACNNNGTC	3 cut(s)	829, 1460, 1601
RruI	TCGCGA	1 cut(s)	1971
RseI	CAYNNNNRTG	2 cut(s)	2187, 2436
SaqAI	TTAA	5 cut(s)	191, 1140, 1548, 1692, 2130
SatI	GCNGC	7 cut(s)	91, 224, 483, 643, 1246, 1535, 2520
Sau96I	GGNCC	3 cut(s)	115, 135, 1648
ScaI	AGTACT	2 cut(s)	938, 1094
SchI	GAGTC	3 cut(s)	335, 417, 725
ScrFI	CCNGG	4 cut(s)	346, 958, 1914, 1986
SduI	GDGCHC	2 cut(s)	676, 2425
SfaNI	GCATC	8 cut(s)	260, 501, 1075, 1137, 1618, 1733, 1828, 2567
SfcI	CTRYAG	2 cut(s)	1240, 1784
SinI	GGWCC	1 cut(s)	1648
SmiMI	CAYNNNNRTG	2 cut(s)	2187, 2436
SmlI	CTYRAG	1 cut(s)	1762
SmoI	CTYRAG	1 cut(s)	1762
SseBI	AGGCCT	1 cut(s)	2404
SsiI	CCGC	9 cut(s)	142, 457, 480, 500, 530, 640, 643, 706, 1246
SspMI	CTAG	4 cut(s)	677, 699, 2204, 2337
StuI	AGGCCT	1 cut(s)	2404
StyD4I	CCNGG	4 cut(s)	344, 956, 1912, 1984
StyI	CCWWGG	1 cut(s)	667
TaaI	ACNGT	9 cut(s)	213, 327, 602, 626, 1054, 1575, 1603, 1675, 1981
TaiI	ACGT	4 cut(s)	688, 978, 1870, 2494
TaqI	TCGA	2 cut(s)	510, 726
TatI	WGTACW	7 cut(s)	805, 936, 1064, 1092, 1112, 1711, 1877
TauI	GCSGC	2 cut(s)	645, 1248
TfiI	GAWTC	7 cut(s)	102, 291, 298, 782, 1373, 1697, 1718
Tru1I	TTAA	5 cut(s)	191, 1140, 1548, 1692, 2130
Tru9I	TTAA	5 cut(s)	191, 1140, 1548, 1692, 2130
TscAI	CASTG	6 cut(s)	103, 563, 1129, 1411, 1606, 1934
TseFI	GTSAC	3 cut(s)	427, 1124, 1454
TseI	GCWGC	5 cut(s)	90, 223, 482, 1534, 2519
Tsp45I	GTSAC	3 cut(s)	427, 1124, 1454
TspDTI	ATGAA	7 cut(s)	594, 1959, 1973, 2014, 2281, 2527, 2529
TspGWI	ACGGA	4 cut(s)	709, 1355, 2130, 2204
TspRI	CASTG	6 cut(s)	103, 563, 1129, 1411, 1606, 1934
Tth111I	GACNNNGTC	3 cut(s)	829, 1460, 1601
Van91I	CCANNNNNTGG	1 cut(s)	1333
VneI	GTGCAC	1 cut(s)	2421
VpaK11BI	GGWCC	1 cut(s)	1648
XapI	RAATTY	4 cut(s)	386, 800, 1469, 1854
XceI	RCATGY	2 cut(s)	1489, 2452
XspI	CTAG	4 cut(s)	677, 699, 2204, 2337
ZraI	GACGTC	1 cut(s)	2492
ZrmI	AGTACT	2 cut(s)	938, 1094
Zsp2I	ATGCAT	1 cut(s)	275

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.