Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0006317

Physical Location & Seq

Genomic Coordinates Reverse (-)

6270933 .. 6276057

Gene Structure 5125 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011037

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2424 bp

ATGGAGCATCCCACCGCCTCAAATCGACGCTCTCAAATCGTCCCCGCCATCTCTCTGCAATGCTCGTCATCAGTGCGTCGTCCCAATTTTGATTGTGCTTTTCGCCGGAGAAGGCCGTTCATCTTCTCGAATTGTTCACGGTGGTTATTTACTCCGCCGCAGTCAACGCCGGTCAAATCGACTCGCTCTTTCTCCTCCGTCGTCGTTTCATCCTCAAATCCTGGAATGGGATCCGTCGGTGCCCTAGACCTACGTTTGAAGTACCCTAGTGTCCGCCGAGATGAGTCCGTCGTCGATGACTACCACGGCGTCAAGGTTGCCGATCCTTATAGATGGCTTGAAGATCCTGATTCGGAAGAGACGAAGGAATTTGTACAGAAACAAGTGGAATTGACGCAGTCGGTGCTGAAGGAATGCGATGATGTCAGAGGGAAGCTATCTGATAAAATCACCAAGCTGTTTGATCACCCACGCTATGATCCACCTTTTCGGCGAGGGAGCAAGTACTTCTACTCCCATAACACCGGGCTTCAAGCTCAAAACGTGCTCTATGTGCAGGATAGTTTGGATGGAGAACCGGAGGTTTTGCTTGATCCTAATACGCTTAGTGAAGATGGGACAGTAGCTTTGAGTACATATTCAGTAAGTGAGGATGCCAAGTACTTGGCCTATGCCCTTAGTACAAGTGGCAGTGATTGGGTAACAATTAAAGTGATGTGCGTTGAGGATAAGAAGGTGGAGCCAGAAACTTTATCTTGGGTCAAGTTTTCTGGAATTAGTTGGACACATGATAACAAAGGGTTTTTCTATAGCCGCTATCCAGCTCCAAAAGAAGGAGAGGACATTGACGCTGGCACAGAGACCGACGCAAATCTTTATCATGAGTTATACTACCATTTTGTGGGTACGGATCAATCAAAAGACATATTATGCTGGAAAGATTCTGAAAATCCCAAATACTTGTTTGGAGCCAGTGTTACTGATGATGGGAAGTATGCTCTTATATATATTGATGAGGGTTGTGACCCAGTCAACAAATTTTACTACTGCGACATGTCTGCACTTCCTAATGGGCTTGAAGGTCTGAGGGGGGAAAATGAGCTGCTTCCAGTTCTTAAGCTTGTTGATACATTTGAGGCACGGTATCATGTGATTGCAAATGATGACACTGTCTTTACTTTGCTGACAAATAAAGATGCTCCAAAATATAAGTTGGTCCGAGTTGATCTGAAGGAACCAACTGTTTGGACTGACGTGATTAAAGAATCTGAAAAAGACGTACTTGAATCAGCATCTGCTGTAAATGGTACCCAAATGATTGTTAGTTACTTGAGTGATGTGAAATATGTTCTACAGATCAGGGATTTGAAATCGGGTAGCTTGGTGCATCAATTGCCCATTGACATTGGCTCAGTTACTGGAATTTCTGCAAGACGTAAAGATAGTACAGTTTTCTTTGGCTTTACAAGCTTTGTTACACCGGGAGTAATATATCAGTGTAATTTAGACAATGAAGTTCCAGATATGAAGGTATTTCGCGAAATTACAGTTCCTGGGTTTGAACGCTCAGACTTCCATGTTGATCAGGTATTCATACCCAGTAAGGATGGCACTCAGATACCTATATTTGTTGTGGCCAGAAAGAACATTATTTTGGATGGATCACACCCTTGTTTGTTGTACGGATATGGTGGATTTAACATTAGTCTTACGCCATCATTCAGCGTTAGTCGCATGGTACTTACAAGACATTTAGGTGTTGTTTACTGCCTAGCAAATATTCGTGGGGGTGGAGAGTATGGAGAGGAATGGCATAAGGCAGGCTCCCTGTCAAAAAAGCAAAATTGCTTTGATGACTTTATTTCTGCTGGTGAATACCTTGTGTCTGCTGGTTACACCCAACCTAGCAAGTTGTGCATAGAAGGTGGAAGTAATGGGGGGCTCCTTATCGGGGCTTGCATAAATCAGAGGCCTGATCTTTTTGGTTGTGCACTTGCTCATGTTGGTGTAATGGACATGCTGAGGTTCCACAAGTTTACCATAGGTCATGCATGGACTTCTGATTATGGATGTTCTGACAAGGAGGAAGAATTCCGTTGGCTAATTAAGTACTCGCCTCTACACAACGTCAGGAGACCATGGGAACATCATCCAAACCAATGCCAGCAATACCCACCTACCATGCTATTGACTGCAGATCATGATGACCGAGTTGTCCCATTACACTCGTTGAAGTTATTGGCGACATTGCAATATGTGTTAATTACAAGTTTGGAGAAAAGTCCACAGATCAATCCAATTATTGGACGCATTGAATGCAAGGCAGGGCATGGAGCTGGACGTCCGACACAGAAAATGATTGATGAAGCTGCTGACCGGTTTAGTTTCATGGCTAAGATGTTGGGTGCATCATGGATAGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0016787 GO:0019538 GO:0033218 GO:0042277 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04614 map04614

Pfam Domains

Protein Families

Peptidase_S9 Peptidase_S9_N

Protein Analysis

808

Amino Acids

90.74

Weight (kDa)

5.71

Isoelectric Point (pI)

44.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_S9_N	PF02897	89 - 506	3.3e-137	Prolyl oligopeptidase, N-terminal beta-propeller domain
Peptidase_S9	PF00326	572 - 802	4.5e-59	Prolyl oligopeptidase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006317)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20380 AT1G20380 AT1G76140 AT1G76140
fragaria_vesca	FvH4_2g37820 FvH4_2g37820 FvH4_2g37820 FvH4_2g37820
malus_domestica	MD08G1005500.v1.1 MD15G1004900.v1.1
prunus_persica	Prupe.1G357500_v2.0.a1 Prupe.1G357700_v2.0.a1 Prupe.1G357700_v2.0.a1 Prupe.1G357700_v2.0.a1
pyrus_communis	pycom15g00350
rosa_chinensis	RchiOBHm_Chr6g0303891
rosa_laevigata	RLG00000011037
rosa_multiflora	Rmu_sc0004644.1_g000008 Rmu_sc0007179.1_g000009
rosa_roxburghii	Rroxscaffold_5G00357480 Rroxscaffold_7G00164300
rosa_rugosa	Rorug06G0325600
rosa_samantha	Rh6AG439900 Rh6BG463100 Rh6CG452200 Rh6DG439100
rosa_wichuraiana	Rw6G038090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2213
AatII	GACGTC	1 cut(s)	2344
Acc65I	GGTACC	1 cut(s)	1307
AccB1I	GGYRCC	2 cut(s)	239, 1307
AccB7I	CCANNNNNTGG	2 cut(s)	901, 2303
AccII	CGCG	1 cut(s)	1539
AciI	CCGC	6 cut(s)	15, 45, 155, 158, 274, 814
AclWI	GGATC	8 cut(s)	225, 238, 317, 338, 473, 587, 918, 1669
AcoI	YGGCCR	1 cut(s)	1635
AcsI	RAATTY	4 cut(s)	368, 1037, 1422, 2090
AcuI	CTGAAG	2 cut(s)	428, 1250
AcyI	GRCGYC	2 cut(s)	309, 2341
AfiI	CCNNNNNNNGG	5 cut(s)	227, 833, 901, 1951, 2303
AflII	CTTAAG	1 cut(s)	1115
AflIII	ACRYGT	1 cut(s)	1053
AgeI	ACCGGT	1 cut(s)	2376
AgsI	TTSAA	9 cut(s)	259, 341, 533, 1079, 1286, 1369, 1562, 2233, 2315
AjiI	CACGTC	1 cut(s)	1255
AjnI	CCWGG	2 cut(s)	220, 1552
AjuI	GAANNNNNNNTTGG	2 cut(s)	1637, 1669
Alw21I	GWGCWC	2 cut(s)	549, 1993
Alw26I	GTCTC	3 cut(s)	353, 854, 2128
Alw44I	GTGCAC	1 cut(s)	1989
AlwI	GGATC	8 cut(s)	225, 238, 317, 338, 473, 587, 918, 1669
AlwNI	CAGNNNCTG	3 cut(s)	1295, 1418, 1553
AoxI	GGCC	4 cut(s)	113, 666, 1635, 1970
ApaLI	GTGCAC	1 cut(s)	1989
ApeKI	GCWGC	2 cut(s)	1102, 2369
ApoI	RAATTY	4 cut(s)	368, 1037, 1422, 2090
ArsI	GACNNNNNNTTYG	2 cut(s)	610, 642
AsiGI	ACCGGT	1 cut(s)	2376
Asp718I	GGTACC	1 cut(s)	1307
AspS9I	GGNCC	1 cut(s)	1216
AsuC2I	CCSGG	2 cut(s)	526, 1482
AsuHPI	GGTGA	3 cut(s)	442, 458, 1883
AvaII	GGWCC	1 cut(s)	1216
BaeGI	GKGCMC	2 cut(s)	244, 1993
BalI	TGGCCA	1 cut(s)	1637
BamHI	GGATCC	1 cut(s)	230
BanI	GGYRCC	2 cut(s)	239, 1307
BanII	GRGCYC	1 cut(s)	1944
Bbv12I	GWGCWC	2 cut(s)	549, 1993
BbvCI	CCTCAGC	1 cut(s)	2021
BbvI	GCAGC	2 cut(s)	1089, 2356
BccI	CCATC	8 cut(s)	56, 327, 563, 608, 980, 1601, 1652, 1723
BceAI	ACGGC	2 cut(s)	100, 322
BcgI	CGANNNNNNTGC	2 cut(s)	1040, 1074
BciT130I	CCWGG	2 cut(s)	222, 1554
BclI	TGATCA	2 cut(s)	463, 1582
BcnI	CCSGG	2 cut(s)	526, 1482
BcoDI	GTCTC	3 cut(s)	353, 854, 2128
BfaI	CTAG	4 cut(s)	245, 267, 1772, 1905
BfmI	CTRYAG	3 cut(s)	808, 1352, 2193
BfrI	CTTAAG	1 cut(s)	1115
BisI	GCNGC	4 cut(s)	158, 814, 1103, 2370
BlsI	GCNGC	4 cut(s)	159, 815, 1104, 2371
BmcAI	AGTACT	3 cut(s)	506, 662, 2111
Bme1390I	CCNGG	4 cut(s)	222, 526, 1482, 1554
Bme18I	GGWCC	1 cut(s)	1216
BmgBI	CACGTC	1 cut(s)	1255
BmgT120I	GGNCC	1 cut(s)	1216
BmiI	GGNNCC	9 cut(s)	232, 241, 741, 970, 1236, 1309, 1825, 1943, 2027
BmrFI	CCNGG	4 cut(s)	222, 526, 1482, 1554
BmrI	ACTGGG	2 cut(s)	1022, 1593
BmsI	GCATC	6 cut(s)	16, 643, 1186, 1301, 1396, 2417
BmuI	ACTGGG	2 cut(s)	1022, 1593
Bpu10I	CCTNAGC	1 cut(s)	2021
BpuEI	CTTGAG	1 cut(s)	1351
BpuMI	CCSGG	2 cut(s)	526, 1482
BsaHI	GRCGYC	2 cut(s)	309, 2341
BsaI	GGTCTC	2 cut(s)	854, 2128
BsaJI	CCNNGG	3 cut(s)	304, 1553, 2138
BsaWI	WCCGGW	2 cut(s)	577, 2376
BsaXI	ACNNNNNCTCC	4 cut(s)	497, 527, 960, 990
Bsc4I	CCNNNNNNNGG	5 cut(s)	227, 833, 901, 1951, 2303
Bse118I	RCCGGY	2 cut(s)	169, 2376
Bse1I	ACTGG	5 cut(s)	972, 1028, 1109, 1423, 1599
Bse3DI	GCAATG	2 cut(s)	65, 2246
BseBI	CCWGG	2 cut(s)	222, 1554
BseDI	CCNNGG	3 cut(s)	304, 1553, 2138
BseGI	GGATG	8 cut(s)	7, 209, 574, 658, 1612, 1663, 2075, 2149
BseLI	CCNNNNNNNGG	5 cut(s)	227, 833, 901, 1951, 2303
BseMI	GCAATG	2 cut(s)	65, 2246
BseMII	CTCAG	5 cut(s)	1076, 1425, 1581, 1628, 2012
BseNI	ACTGG	5 cut(s)	972, 1028, 1109, 1423, 1599
BseRI	GAGGAG	1 cut(s)	184
BseSI	GKGCMC	2 cut(s)	244, 1993
BseXI	GCAGC	2 cut(s)	1089, 2356
BsgI	GTGCAG	2 cut(s)	575, 1044
Bsh1236I	CGCG	1 cut(s)	1539
BshFI	GGCC	4 cut(s)	115, 668, 1637, 1972
BshNI	GGYRCC	2 cut(s)	239, 1307
BshTI	ACCGGT	1 cut(s)	2376
BsiHKAI	GWGCWC	2 cut(s)	549, 1993
BsiSI	CCGG	6 cut(s)	106, 170, 525, 578, 1481, 2377
BslFI	GGGAC	4 cut(s)	26, 66, 631, 2201
BslI	CCNNNNNNNGG	5 cut(s)	227, 833, 901, 1951, 2303
BsmAI	GTCTC	3 cut(s)	353, 854, 2128
BsmBI	CGTCTC	1 cut(s)	353
BsmFI	GGGAC	4 cut(s)	26, 66, 631, 2201
BsmI	GAATGC	2 cut(s)	419, 2321
BsnI	GGCC	4 cut(s)	115, 668, 1637, 1972
Bso31I	GGTCTC	2 cut(s)	854, 2128
Bsp1286I	GDGCHC	4 cut(s)	244, 549, 1944, 1993
Bsp1407I	TGTACA	1 cut(s)	373
Bsp19I	CCATGG	1 cut(s)	2138
Bsp68I	TCGCGA	1 cut(s)	1539
BspACI	CCGC	6 cut(s)	15, 45, 155, 158, 274, 814
BspANI	GGCC	4 cut(s)	115, 668, 1637, 1972
BspCNI	CTCAG	5 cut(s)	1077, 1424, 1580, 1627, 2013
BspFNI	CGCG	1 cut(s)	1539
BspHI	TCATGA	2 cut(s)	880, 2200
BspLI	GGNNCC	9 cut(s)	232, 241, 741, 970, 1236, 1309, 1825, 1943, 2027
BspMAI	CTGCAG	1 cut(s)	2197
BspPI	GGATC	8 cut(s)	225, 238, 317, 338, 473, 587, 918, 1669
BspT107I	GGYRCC	2 cut(s)	239, 1307
BspTI	CTTAAG	1 cut(s)	1115
BspTNI	GGTCTC	2 cut(s)	854, 2128
BsrDI	GCAATG	2 cut(s)	65, 2246
BsrFI	RCCGGY	2 cut(s)	169, 2376
BsrGI	TGTACA	1 cut(s)	373
BsrI	ACTGG	5 cut(s)	972, 1028, 1109, 1423, 1599
BssAI	RCCGGY	2 cut(s)	169, 2376
BssECI	CCNNGG	3 cut(s)	304, 1553, 2138
BssNI	GRCGYC	2 cut(s)	309, 2341
BssT1I	CCWWGG	1 cut(s)	2138
Bst2UI	CCWGG	2 cut(s)	222, 1554
Bst4CI	ACNGT	7 cut(s)	141, 622, 1143, 1171, 1243, 1450, 1549
Bst6I	CTCTTC	1 cut(s)	351
BstACI	GRCGYC	2 cut(s)	309, 2341
BstAFI	CTTAAG	1 cut(s)	1115
BstAPI	GCANNNNNTGC	4 cut(s)	403, 1393, 1914, 2316
BstAUI	TGTACA	1 cut(s)	373
BstC8I	GCNNGC	4 cut(s)	853, 1822, 1957, 2165
BstDEI	CTNAG	8 cut(s)	605, 677, 1085, 1411, 1567, 1614, 2021, 2394
BstDSI	CCRYGG	2 cut(s)	304, 2138
BstF5I	GGATG	8 cut(s)	7, 209, 574, 658, 1612, 1663, 2075, 2149
BstFNI	CGCG	1 cut(s)	1539
BstMAI	GTCTC	3 cut(s)	353, 854, 2128
BstMWI	GCNNNNNNNGC	8 cut(s)	166, 403, 553, 1393, 1467, 1731, 1914, 2316
BstNI	CCWGG	2 cut(s)	222, 1554
BstNSI	RCATGY	2 cut(s)	1057, 2020
BstSCI	CCNGG	4 cut(s)	220, 524, 1480, 1552
BstSFI	CTRYAG	3 cut(s)	808, 1352, 2193
BstSLI	GKGCMC	2 cut(s)	244, 1993
BstUI	CGCG	1 cut(s)	1539
BstV1I	GCAGC	2 cut(s)	1089, 2356
BstX2I	RGATCY	2 cut(s)	230, 343
BstXI	CCANNNNNNTGG	2 cut(s)	664, 1245
BstYI	RGATCY	2 cut(s)	230, 343
BsuRI	GGCC	4 cut(s)	115, 668, 1637, 1972
BtgI	CCRYGG	2 cut(s)	304, 2138
BtgZI	GCGATG	1 cut(s)	432
BtrI	CACGTC	1 cut(s)	1255
BtsCI	GGATG	8 cut(s)	7, 209, 574, 658, 1612, 1663, 2075, 2149
BtsI	GCAGTG	1 cut(s)	697
BtsIMutI	CAGTG	5 cut(s)	78, 697, 979, 1167, 1502
BtuMI	TCGCGA	1 cut(s)	1539
Cac8I	GCNNGC	4 cut(s)	853, 1822, 1957, 2165
CaiI	CAGNNNCTG	3 cut(s)	1295, 1418, 1553
CciI	TCATGA	2 cut(s)	880, 2200
Cfr10I	RCCGGY	2 cut(s)	169, 2376
Cfr13I	GGNCC	1 cut(s)	1216
CseI	GACGC	7 cut(s)	36, 65, 298, 403, 857, 875, 2316
CspAI	ACCGGT	1 cut(s)	2376
DdeI	CTNAG	8 cut(s)	605, 677, 1085, 1411, 1567, 1614, 2021, 2394
DrdI	GACNNNNNNGTC	1 cut(s)	2213
DseDI	GACNNNNNNGTC	1 cut(s)	2213
EaeI	YGGCCR	1 cut(s)	1635
Eam1104I	CTCTTC	1 cut(s)	351
EarI	CTCTTC	1 cut(s)	351
EciI	GGCGGA	2 cut(s)	144, 263
Eco130I	CCWWGG	1 cut(s)	2138
Eco147I	AGGCCT	1 cut(s)	1972
Eco24I	GRGCYC	1 cut(s)	1944
Eco31I	GGTCTC	2 cut(s)	854, 2128
Eco47I	GGWCC	1 cut(s)	1216
Eco57I	CTGAAG	2 cut(s)	428, 1250
EcoRI	GAATTC	1 cut(s)	2090
EcoRII	CCWGG	2 cut(s)	220, 1552
EcoT14I	CCWWGG	1 cut(s)	2138
EcoT22I	ATGCAT	1 cut(s)	2053
EcoT38I	GRGCYC	1 cut(s)	1944
ErhI	CCWWGG	1 cut(s)	2138
Esp3I	CGTCTC	1 cut(s)	353
FalI	AAGNNNNNCTT	2 cut(s)	1266, 1298
FaqI	GGGAC	4 cut(s)	26, 66, 631, 2201
FauI	CCCGC	1 cut(s)	52
FbaI	TGATCA	2 cut(s)	463, 1582
Fnu4HI	GCNGC	4 cut(s)	158, 814, 1103, 2370
FokI	GGATG	7 cut(s)	196, 581, 665, 1619, 1670, 2082, 2136
FriOI	GRGCYC	1 cut(s)	1944
Fsp4HI	GCNGC	4 cut(s)	158, 814, 1103, 2370
FspBI	CTAG	4 cut(s)	245, 267, 1772, 1905
GluI	GCNGC	4 cut(s)	158, 814, 1103, 2370
HaeIII	GGCC	4 cut(s)	115, 668, 1637, 1972
HapII	CCGG	6 cut(s)	106, 170, 525, 578, 1481, 2377
HgaI	GACGC	7 cut(s)	36, 65, 298, 403, 857, 875, 2316
Hin1I	GRCGYC	2 cut(s)	309, 2341
HincII	GTYRAC	2 cut(s)	165, 1033
HindII	GTYRAC	2 cut(s)	165, 1033
HindIII	AAGCTT	2 cut(s)	1118, 1468
HinfI	GANTC	6 cut(s)	181, 284, 350, 941, 1265, 1286
HpaII	CCGG	6 cut(s)	106, 170, 525, 578, 1481, 2377
HphI	GGTGA	3 cut(s)	442, 458, 1883
Hpy166II	GTNNAC	7 cut(s)	137, 165, 1033, 1765, 1991, 2037, 2285
Hpy188III	TCNNGA	8 cut(s)	127, 347, 771, 881, 1520, 1538, 2131, 2201
Hpy8I	GTNNAC	7 cut(s)	137, 165, 1033, 1765, 1991, 2037, 2285
Hpy99I	CGWCG	8 cut(s)	30, 81, 203, 206, 239, 293, 296, 869
HpyAV	CCTTC	9 cut(s)	105, 358, 403, 727, 827, 1073, 1225, 1522, 1916
HpyCH4III	ACNGT	7 cut(s)	141, 622, 1143, 1171, 1243, 1450, 1549
HpyCH4IV	ACGT	7 cut(s)	253, 543, 1254, 1278, 1435, 2127, 2341
HpyF10VI	GCNNNNNNNGC	8 cut(s)	166, 403, 553, 1393, 1467, 1731, 1914, 2316
HpyF3I	CTNAG	8 cut(s)	605, 677, 1085, 1411, 1567, 1614, 2021, 2394
HpySE526I	ACGT	7 cut(s)	253, 543, 1254, 1278, 1435, 2127, 2341
Hsp92I	GRCGYC	2 cut(s)	309, 2341
KpnI	GGTACC	1 cut(s)	1311
Ksp22I	TGATCA	2 cut(s)	463, 1582
LmnI	GCTCC	9 cut(s)	4, 498, 739, 829, 968, 1204, 1829, 1947, 2333
Lsp1109I	GCAGC	2 cut(s)	1089, 2356
LweI	GCATC	6 cut(s)	16, 643, 1186, 1301, 1396, 2417
MaeI	CTAG	4 cut(s)	245, 267, 1772, 1905
MaeII	ACGT	7 cut(s)	253, 543, 1254, 1278, 1435, 2127, 2341
MaeIII	GTNAC	7 cut(s)	700, 976, 1022, 1325, 1414, 1474, 1892
MboII	GAAGA	5 cut(s)	115, 353, 368, 623, 2099
MfeI	CAATTG	1 cut(s)	1391
MflI	RGATCY	2 cut(s)	230, 343
MhlI	GDGCHC	4 cut(s)	244, 549, 1944, 1993
MlsI	TGGCCA	1 cut(s)	1637
MluNI	TGGCCA	1 cut(s)	1637
MlyI	GAGTC	2 cut(s)	175, 293
MmeI	TCCRAC	2 cut(s)	761, 2369
Mox20I	TGGCCA	1 cut(s)	1637
Mph1103I	ATGCAT	1 cut(s)	2053
MscI	TGGCCA	1 cut(s)	1637
MseI	TTAA	6 cut(s)	708, 1116, 1260, 1698, 2106, 2261
MslI	CAYNNNNRTG	2 cut(s)	1755, 2004
Msp20I	TGGCCA	1 cut(s)	1637
MspCI	CTTAAG	1 cut(s)	1115
MspI	CCGG	6 cut(s)	106, 170, 525, 578, 1481, 2377
MspR9I	CCNGG	4 cut(s)	222, 526, 1482, 1554
MunI	CAATTG	1 cut(s)	1391
Mva1269I	GAATGC	2 cut(s)	419, 2321
MvaI	CCWGG	2 cut(s)	222, 1554
MvnI	CGCG	1 cut(s)	1539
MwoI	GCNNNNNNNGC	8 cut(s)	166, 403, 553, 1393, 1467, 1731, 1914, 2316
NciI	CCSGG	2 cut(s)	526, 1482
NcoI	CCATGG	1 cut(s)	2138
NlaIV	GGNNCC	9 cut(s)	232, 241, 741, 970, 1236, 1309, 1825, 1943, 2027
NmeAIII	GCCGAG	1 cut(s)	302
NmuCI	GTSAC	1 cut(s)	1022
NruI	TCGCGA	1 cut(s)	1539
NsiI	ATGCAT	1 cut(s)	2053
NspI	RCATGY	2 cut(s)	1057, 2020
PagI	TCATGA	2 cut(s)	880, 2200
PceI	AGGCCT	1 cut(s)	1972
PciI	ACATGT	1 cut(s)	1053
PcsI	WCGNNNNNNNCGW	1 cut(s)	359
PctI	GAATGC	2 cut(s)	419, 2321
PfeI	GAWTC	4 cut(s)	350, 941, 1265, 1286
PflFI	GACNNNGTC	3 cut(s)	397, 1028, 1169
PflMI	CCANNNNNTGG	2 cut(s)	901, 2303
PfoI	TCCNGGA	1 cut(s)	220
PinAI	ACCGGT	1 cut(s)	2376
PkrI	GCNGC	4 cut(s)	159, 815, 1104, 2371
PleI	GAGTC	2 cut(s)	175, 292
PpsI	GAGTC	2 cut(s)	175, 292
PscI	ACATGT	1 cut(s)	1053
Psp6I	CCWGG	2 cut(s)	220, 1552
PspGI	CCWGG	2 cut(s)	220, 1552
PspN4I	GGNNCC	9 cut(s)	232, 241, 741, 970, 1236, 1309, 1825, 1943, 2027
PspPI	GGNCC	1 cut(s)	1216
PstI	CTGCAG	1 cut(s)	2197
PstNI	CAGNNNCTG	3 cut(s)	1295, 1418, 1553
PsuI	RGATCY	2 cut(s)	230, 343
PsyI	GACNNNGTC	3 cut(s)	397, 1028, 1169
RruI	TCGCGA	1 cut(s)	1539
RseI	CAYNNNNRTG	2 cut(s)	1755, 2004
SaqAI	TTAA	6 cut(s)	708, 1116, 1260, 1698, 2106, 2261
SatI	GCNGC	4 cut(s)	158, 814, 1103, 2370
Sau96I	GGNCC	1 cut(s)	1216
ScaI	AGTACT	3 cut(s)	506, 662, 2111
SchI	GAGTC	2 cut(s)	175, 293
ScrFI	CCNGG	4 cut(s)	222, 526, 1482, 1554
SduI	GDGCHC	4 cut(s)	244, 549, 1944, 1993
SfaNI	GCATC	6 cut(s)	16, 643, 1186, 1301, 1396, 2417
SfcI	CTRYAG	3 cut(s)	808, 1352, 2193
SinI	GGWCC	1 cut(s)	1216
SmiMI	CAYNNNNRTG	2 cut(s)	1755, 2004
SmlI	CTYRAG	2 cut(s)	1115, 1330
SmoI	CTYRAG	2 cut(s)	1115, 1330
SseBI	AGGCCT	1 cut(s)	1972
SsiI	CCGC	6 cut(s)	15, 45, 155, 158, 274, 814
SspI	AATATT	1 cut(s)	1780
SspMI	CTAG	4 cut(s)	245, 267, 1772, 1905
StuI	AGGCCT	1 cut(s)	1972
StyD4I	CCNGG	4 cut(s)	220, 524, 1480, 1552
StyI	CCWWGG	1 cut(s)	2138
TaaI	ACNGT	7 cut(s)	141, 622, 1143, 1171, 1243, 1450, 1549
TaiI	ACGT	7 cut(s)	256, 546, 1257, 1281, 1438, 2130, 2344
TaqI	TCGA	4 cut(s)	25, 128, 179, 294
TaqII	GACCGA	2 cut(s)	878, 2223
TatI	WGTACW	7 cut(s)	373, 504, 632, 660, 680, 1445, 2109
TauI	GCSGC	2 cut(s)	160, 816
TfiI	GAWTC	4 cut(s)	350, 941, 1265, 1286
Tru1I	TTAA	6 cut(s)	708, 1116, 1260, 1698, 2106, 2261
Tru9I	TTAA	6 cut(s)	708, 1116, 1260, 1698, 2106, 2261
TscAI	CASTG	5 cut(s)	78, 697, 979, 1174, 1502
TseFI	GTSAC	1 cut(s)	1022
TseI	GCWGC	2 cut(s)	1102, 2369
Tsp45I	GTSAC	1 cut(s)	1022
TspDTI	ATGAA	7 cut(s)	109, 198, 1527, 1541, 1582, 2377, 2379
TspGWI	ACGGA	6 cut(s)	187, 223, 277, 923, 1698, 2084
TspRI	CASTG	5 cut(s)	78, 697, 979, 1174, 1502
Tth111I	GACNNNGTC	3 cut(s)	397, 1028, 1169
Van91I	CCANNNNNTGG	2 cut(s)	901, 2303
Vha464I	CTTAAG	1 cut(s)	1115
VneI	GTGCAC	1 cut(s)	1989
VpaK11BI	GGWCC	1 cut(s)	1216
XapI	RAATTY	4 cut(s)	368, 1037, 1422, 2090
XceI	RCATGY	2 cut(s)	1057, 2020
XspI	CTAG	4 cut(s)	245, 267, 1772, 1905
ZraI	GACGTC	1 cut(s)	2342
ZrmI	AGTACT	3 cut(s)	506, 662, 2111
Zsp2I	ATGCAT	1 cut(s)	2053

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.