Prolyl endopeptidase-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G20380 AT1G20380 AT1G76140 AT1G76140 |
| fragaria_vesca | FvH4_2g37820 FvH4_2g37820 FvH4_2g37820 FvH4_2g37820 |
| malus_domestica | MD08G1005500.v1.1 MD15G1004900.v1.1 |
| prunus_persica | Prupe.1G357500_v2.0.a1 Prupe.1G357700_v2.0.a1 Prupe.1G357700_v2.0.a1 Prupe.1G357700_v2.0.a1 |
| pyrus_communis | pycom15g00350 |
| rosa_chinensis | RchiOBHm_Chr6g0303891 |
| rosa_laevigata | RLG00000011037 |
| rosa_multiflora | Rmu_sc0004644.1_g000008 Rmu_sc0007179.1_g000009 |
| rosa_roxburghii | Rroxscaffold_5G00357480 Rroxscaffold_7G00164300 |
| rosa_rugosa | Rorug06G0325600 |
| rosa_samantha | Rh6AG439900 Rh6BG463100 Rh6CG452200 Rh6DG439100 |
| rosa_wichuraiana | Rw6G038090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 548 |
| AccIII | TCCGGA | 1 cut(s) | 1336 |
| AciI | CCGC | 2 cut(s) | 49, 490 |
| AclWI | GGATC | 7 cut(s) | 92, 113, 245, 359, 752, 765, 1486 |
| AcoI | YGGCCR | 1 cut(s) | 1452 |
| AcsI | RAATTY | 5 cut(s) | 571, 854, 1186, 1332, 1907 |
| AcuI | CTGAAG | 1 cut(s) | 953 |
| AcyI | GRCGYC | 2 cut(s) | 84, 426 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1475 |
| AflIII | ACRYGT | 2 cut(s) | 870, 2043 |
| AgeI | ACCGGT | 1 cut(s) | 2193 |
| AjiI | CACGTC | 2 cut(s) | 25, 1253 |
| AjnI | CCWGG | 4 cut(s) | 327, 1297, 1369, 1695 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 582, 614, 1454, 1486 |
| AleI | CACNNNNGTG | 1 cut(s) | 1486 |
| AluBI | AGCT | 9 cut(s) | 208, 229, 615, 937, 1085, 1688, 1772, 1814, 2186 |
| AluI | AGCT | 9 cut(s) | 208, 229, 615, 937, 1085, 1688, 1772, 1814, 2186 |
| Alw21I | GWGCWC | 2 cut(s) | 1810, 2084 |
| Alw26I | GTCTC | 4 cut(s) | 128, 671, 1780, 1945 |
| Alw44I | GTGCAC | 1 cut(s) | 1806 |
| AlwI | GGATC | 7 cut(s) | 92, 113, 245, 359, 752, 765, 1486 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1370 |
| Aor13HI | TCCGGA | 1 cut(s) | 1336 |
| AoxI | GGCC | 2 cut(s) | 438, 1452 |
| ApaLI | GTGCAC | 1 cut(s) | 1806 |
| ApeKI | GCWGC | 4 cut(s) | 1201, 1685, 1759, 2186 |
| ApoI | RAATTY | 5 cut(s) | 571, 854, 1186, 1332, 1907 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 382, 414 |
| AseI | ATTAAT | 1 cut(s) | 828 |
| AsiGI | ACCGGT | 1 cut(s) | 2193 |
| AspS9I | GGNCC | 1 cut(s) | 1033 |
| AsuC2I | CCSGG | 1 cut(s) | 1037 |
| AsuHPI | GGTGA | 4 cut(s) | 214, 230, 1285, 1973 |
| AsuII | TTCGAA | 1 cut(s) | 1515 |
| AvaII | GGWCC | 1 cut(s) | 1033 |
| BaeGI | GKGCMC | 3 cut(s) | 19, 30, 1810 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1427, 1460 |
| BalI | TGGCCA | 1 cut(s) | 1454 |
| BamHI | GGATCC | 1 cut(s) | 757 |
| BanI | GGYRCC | 1 cut(s) | 548 |
| BanII | GRGCYC | 1 cut(s) | 8 |
| BauI | CACGAG | 1 cut(s) | 196 |
| BbsI | GAAGAC | 3 cut(s) | 429, 1255, 1263 |
| Bbv12I | GWGCWC | 2 cut(s) | 1810, 2084 |
| BbvI | GCAGC | 4 cut(s) | 1188, 1697, 1746, 2173 |
| BccI | CCATC | 7 cut(s) | 102, 335, 380, 797, 1418, 1469, 1999 |
| BciT130I | CCWGG | 4 cut(s) | 329, 1299, 1371, 1697 |
| BclI | TGATCA | 1 cut(s) | 1399 |
| BcnI | CCSGG | 1 cut(s) | 1037 |
| BcoDI | GTCTC | 4 cut(s) | 128, 671, 1780, 1945 |
| BfaI | CTAG | 3 cut(s) | 20, 42, 1811 |
| BfmI | CTRYAG | 4 cut(s) | 798, 1169, 1683, 2010 |
| BisI | GCNGC | 4 cut(s) | 1202, 1686, 1760, 2187 |
| BlsI | GCNGC | 4 cut(s) | 1203, 1687, 1761, 2188 |
| BmcAI | AGTACT | 2 cut(s) | 278, 1928 |
| Bme1390I | CCNGG | 5 cut(s) | 329, 1037, 1299, 1371, 1697 |
| Bme18I | GGWCC | 1 cut(s) | 1033 |
| BmgBI | CACGTC | 2 cut(s) | 25, 1253 |
| BmgT120I | GGNCC | 1 cut(s) | 1033 |
| BmiI | GGNNCC | 7 cut(s) | 7, 550, 759, 787, 1053, 1642, 1844 |
| BmrFI | CCNGG | 5 cut(s) | 329, 1037, 1299, 1371, 1697 |
| BmrI | ACTGGG | 4 cut(s) | 306, 839, 920, 1410 |
| BmsI | GCATC | 6 cut(s) | 477, 655, 943, 1003, 1213, 2234 |
| BmuI | ACTGGG | 4 cut(s) | 306, 839, 920, 1410 |
| BpiI | GAAGAC | 3 cut(s) | 429, 1255, 1263 |
| Bpu10I | CCTNAGC | 1 cut(s) | 449 |
| Bpu14I | TTCGAA | 1 cut(s) | 1515 |
| BpuEI | CTTGAG | 1 cut(s) | 1168 |
| BpuMI | CCSGG | 1 cut(s) | 1037 |
| Bsa29I | ATCGAT | 2 cut(s) | 69, 942 |
| BsaHI | GRCGYC | 2 cut(s) | 84, 426 |
| BsaI | GGTCTC | 4 cut(s) | 128, 671, 1780, 1945 |
| BsaJI | CCNNGG | 5 cut(s) | 79, 1297, 1370, 1600, 1955 |
| BsaWI | WCCGGW | 2 cut(s) | 1336, 2193 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 269, 299, 777, 807 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1475 |
| Bse118I | RCCGGY | 2 cut(s) | 1706, 2193 |
| Bse1I | ACTGG | 5 cut(s) | 301, 845, 926, 1416, 1984 |
| Bse3DI | GCAATG | 2 cut(s) | 963, 969 |
| BseAI | TCCGGA | 1 cut(s) | 1336 |
| BseBI | CCWGG | 4 cut(s) | 329, 1299, 1371, 1697 |
| BseCI | ATCGAT | 2 cut(s) | 69, 942 |
| BseDI | CCNNGG | 5 cut(s) | 79, 1297, 1370, 1600, 1955 |
| BseGI | GGATG | 4 cut(s) | 346, 1429, 1480, 1991 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1475 |
| BseMI | GCAATG | 2 cut(s) | 963, 969 |
| BseMII | CTCAG | 4 cut(s) | 141, 391, 1398, 2069 |
| BseNI | ACTGG | 5 cut(s) | 301, 845, 926, 1416, 1984 |
| BseSI | GKGCMC | 3 cut(s) | 19, 30, 1810 |
| BseXI | GCAGC | 4 cut(s) | 1188, 1697, 1746, 2173 |
| BseYI | CCCAGC | 2 cut(s) | 668, 1721 |
| BsgI | GTGCAG | 1 cut(s) | 861 |
| BshFI | GGCC | 2 cut(s) | 440, 1454 |
| BshNI | GGYRCC | 1 cut(s) | 548 |
| BshTI | ACCGGT | 1 cut(s) | 2193 |
| BshVI | ATCGAT | 2 cut(s) | 69, 942 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1810, 2084 |
| BsiSI | CCGG | 4 cut(s) | 1036, 1337, 1707, 2194 |
| BslFI | GGGAC | 3 cut(s) | 403, 616, 685 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1475 |
| BsmAI | GTCTC | 4 cut(s) | 128, 671, 1780, 1945 |
| BsmFI | GGGAC | 3 cut(s) | 403, 616, 685 |
| BsmI | GAATGC | 2 cut(s) | 194, 2138 |
| BsnI | GGCC | 2 cut(s) | 440, 1454 |
| Bso31I | GGTCTC | 4 cut(s) | 128, 671, 1780, 1945 |
| Bsp119I | TTCGAA | 1 cut(s) | 1515 |
| Bsp1286I | GDGCHC | 5 cut(s) | 8, 19, 30, 1810, 2084 |
| Bsp13I | TCCGGA | 1 cut(s) | 1336 |
| Bsp1407I | TGTACA | 1 cut(s) | 148 |
| Bsp19I | CCATGG | 2 cut(s) | 79, 1955 |
| BspACI | CCGC | 2 cut(s) | 49, 490 |
| BspANI | GGCC | 2 cut(s) | 440, 1454 |
| BspCNI | CTCAG | 4 cut(s) | 140, 390, 1397, 2070 |
| BspDI | ATCGAT | 2 cut(s) | 69, 942 |
| BspEI | TCCGGA | 1 cut(s) | 1336 |
| BspHI | TCATGA | 2 cut(s) | 697, 2017 |
| BspLI | GGNNCC | 7 cut(s) | 7, 550, 759, 787, 1053, 1642, 1844 |
| BspMAI | CTGCAG | 2 cut(s) | 1687, 2014 |
| BspPI | GGATC | 7 cut(s) | 92, 113, 245, 359, 752, 765, 1486 |
| BspT104I | TTCGAA | 1 cut(s) | 1515 |
| BspT107I | GGYRCC | 1 cut(s) | 548 |
| BspTNI | GGTCTC | 4 cut(s) | 128, 671, 1780, 1945 |
| BsrDI | GCAATG | 2 cut(s) | 963, 969 |
| BsrFI | RCCGGY | 2 cut(s) | 1706, 2193 |
| BsrGI | TGTACA | 1 cut(s) | 148 |
| BsrI | ACTGG | 5 cut(s) | 301, 845, 926, 1416, 1984 |
| BssAI | RCCGGY | 2 cut(s) | 1706, 2193 |
| BssECI | CCNNGG | 5 cut(s) | 79, 1297, 1370, 1600, 1955 |
| BssNI | GRCGYC | 2 cut(s) | 84, 426 |
| BssSI | CACGAG | 1 cut(s) | 196 |
| BssT1I | CCWWGG | 2 cut(s) | 79, 1955 |
| Bst2BI | CACGAG | 1 cut(s) | 196 |
| Bst2UI | CCWGG | 4 cut(s) | 329, 1299, 1371, 1697 |
| Bst6I | CTCTTC | 1 cut(s) | 126 |
| BstACI | GRCGYC | 2 cut(s) | 84, 426 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2133 |
| BstAUI | TGTACA | 1 cut(s) | 148 |
| BstBI | TTCGAA | 1 cut(s) | 1515 |
| BstC8I | GCNNGC | 4 cut(s) | 1493, 1774, 1968, 1972 |
| BstDEI | CTNAG | 8 cut(s) | 127, 377, 449, 586, 902, 1384, 2078, 2211 |
| BstDSI | CCRYGG | 3 cut(s) | 79, 1600, 1955 |
| BstF5I | GGATG | 4 cut(s) | 346, 1429, 1480, 1991 |
| BstMAI | GTCTC | 4 cut(s) | 128, 671, 1780, 1945 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 459, 2133 |
| BstNI | CCWGG | 4 cut(s) | 329, 1299, 1371, 1697 |
| BstNSI | RCATGY | 3 cut(s) | 874, 1837, 1970 |
| BstSCI | CCNGG | 5 cut(s) | 327, 1035, 1297, 1369, 1695 |
| BstSFI | CTRYAG | 4 cut(s) | 798, 1169, 1683, 2010 |
| BstSLI | GKGCMC | 3 cut(s) | 19, 30, 1810 |
| BstV1I | GCAGC | 4 cut(s) | 1188, 1697, 1746, 2173 |
| BstV2I | GAAGAC | 3 cut(s) | 429, 1255, 1263 |
| BstX2I | RGATCY | 2 cut(s) | 118, 757 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 296, 436, 1062 |
| BstYI | RGATCY | 2 cut(s) | 118, 757 |
| Bsu15I | ATCGAT | 2 cut(s) | 69, 942 |
| BsuRI | GGCC | 2 cut(s) | 440, 1454 |
| BsuTUI | ATCGAT | 2 cut(s) | 69, 942 |
| BtgI | CCRYGG | 3 cut(s) | 79, 1600, 1955 |
| BtrI | CACGTC | 2 cut(s) | 25, 1253 |
| BtsCI | GGATG | 4 cut(s) | 346, 1429, 1480, 1991 |
| BtsI | GCAGTG | 2 cut(s) | 469, 1263 |
| BtsIMutI | CAGTG | 7 cut(s) | 294, 385, 469, 984, 1263, 1319, 1546 |
| Cac8I | GCNNGC | 4 cut(s) | 1493, 1774, 1968, 1972 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1370 |
| CciI | TCATGA | 2 cut(s) | 697, 2017 |
| Cfr10I | RCCGGY | 2 cut(s) | 1706, 2193 |
| Cfr13I | GGNCC | 1 cut(s) | 1033 |
| ClaI | ATCGAT | 2 cut(s) | 69, 942 |
| CseI | GACGC | 2 cut(s) | 73, 434 |
| CsiI | ACCWGGT | 1 cut(s) | 1695 |
| CspAI | ACCGGT | 1 cut(s) | 2193 |
| DdeI | CTNAG | 8 cut(s) | 127, 377, 449, 586, 902, 1384, 2078, 2211 |
| EaeI | YGGCCR | 1 cut(s) | 1452 |
| Eam1104I | CTCTTC | 1 cut(s) | 126 |
| EarI | CTCTTC | 1 cut(s) | 126 |
| Eco130I | CCWWGG | 2 cut(s) | 79, 1955 |
| Eco24I | GRGCYC | 1 cut(s) | 8 |
| Eco31I | GGTCTC | 4 cut(s) | 128, 671, 1780, 1945 |
| Eco47I | GGWCC | 1 cut(s) | 1033 |
| Eco57I | CTGAAG | 1 cut(s) | 953 |
| EcoRI | GAATTC | 2 cut(s) | 1186, 1907 |
| EcoRII | CCWGG | 4 cut(s) | 327, 1297, 1369, 1695 |
| EcoT14I | CCWWGG | 2 cut(s) | 79, 1955 |
| EcoT22I | ATGCAT | 1 cut(s) | 1870 |
| EcoT38I | GRGCYC | 1 cut(s) | 8 |
| ErhI | CCWWGG | 2 cut(s) | 79, 1955 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1083, 1115 |
| FaqI | GGGAC | 3 cut(s) | 403, 616, 685 |
| FauI | CCCGC | 1 cut(s) | 483 |
| FbaI | TGATCA | 1 cut(s) | 1399 |
| Fnu4HI | GCNGC | 4 cut(s) | 1202, 1686, 1760, 2187 |
| FokI | GGATG | 4 cut(s) | 353, 1436, 1487, 1978 |
| FriOI | GRGCYC | 1 cut(s) | 8 |
| Fsp4HI | GCNGC | 4 cut(s) | 1202, 1686, 1760, 2187 |
| FspBI | CTAG | 3 cut(s) | 20, 42, 1811 |
| GluI | GCNGC | 4 cut(s) | 1202, 1686, 1760, 2187 |
| GsaI | CCCAGC | 2 cut(s) | 672, 1725 |
| HaeIII | GGCC | 2 cut(s) | 440, 1454 |
| HapII | CCGG | 4 cut(s) | 1036, 1337, 1707, 2194 |
| HgaI | GACGC | 2 cut(s) | 73, 434 |
| Hin1I | GRCGYC | 2 cut(s) | 84, 426 |
| HincII | GTYRAC | 1 cut(s) | 850 |
| HindII | GTYRAC | 1 cut(s) | 850 |
| HindIII | AAGCTT | 3 cut(s) | 206, 227, 935 |
| HinfI | GANTC | 6 cut(s) | 45, 59, 125, 1103, 1512, 2028 |
| HpaII | CCGG | 4 cut(s) | 1036, 1337, 1707, 2194 |
| HphI | GGTGA | 4 cut(s) | 214, 230, 1285, 1973 |
| Hpy166II | GTNNAC | 8 cut(s) | 706, 850, 993, 1166, 1281, 1808, 1854, 2156 |
| Hpy188I | TCNGA | 9 cut(s) | 130, 933, 1002, 1387, 1785, 1879, 1894, 2079, 2115 |
| Hpy188III | TCNNGA | 9 cut(s) | 88, 122, 698, 761, 1245, 1337, 1355, 1948, 2018 |
| Hpy8I | GTNNAC | 8 cut(s) | 706, 850, 993, 1166, 1281, 1808, 1854, 2156 |
| HpyAV | CCTTC | 6 cut(s) | 260, 644, 748, 890, 1339, 1733 |
| HpyCH4IV | ACGT | 6 cut(s) | 24, 315, 324, 1071, 1252, 2045 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 459, 2133 |
| HpyF3I | CTNAG | 8 cut(s) | 127, 377, 449, 586, 902, 1384, 2078, 2211 |
| HpySE526I | ACGT | 6 cut(s) | 24, 315, 324, 1071, 1252, 2045 |
| Hsp92I | GRCGYC | 2 cut(s) | 84, 426 |
| Kpn2I | TCCGGA | 1 cut(s) | 1336 |
| Ksp22I | TGATCA | 1 cut(s) | 1399 |
| LmnI | GCTCC | 6 cut(s) | 11, 785, 927, 1021, 1646, 1769 |
| Lsp1109I | GCAGC | 4 cut(s) | 1188, 1697, 1746, 2173 |
| LweI | GCATC | 6 cut(s) | 477, 655, 943, 1003, 1213, 2234 |
| MabI | ACCWGGT | 1 cut(s) | 1695 |
| MaeI | CTAG | 3 cut(s) | 20, 42, 1811 |
| MaeII | ACGT | 6 cut(s) | 24, 315, 324, 1071, 1252, 2045 |
| MaeIII | GTNAC | 6 cut(s) | 472, 793, 839, 866, 1142, 1193 |
| MboII | GAAGA | 8 cut(s) | 128, 143, 395, 434, 517, 1260, 1268, 1916 |
| MflI | RGATCY | 2 cut(s) | 118, 757 |
| MhlI | GDGCHC | 5 cut(s) | 8, 19, 30, 1810, 2084 |
| MlsI | TGGCCA | 1 cut(s) | 1454 |
| MluNI | TGGCCA | 1 cut(s) | 1454 |
| MlyI | GAGTC | 4 cut(s) | 54, 68, 119, 2037 |
| MmeI | TCCRAC | 2 cut(s) | 1747, 2186 |
| Mox20I | TGGCCA | 1 cut(s) | 1454 |
| Mph1103I | ATGCAT | 1 cut(s) | 1870 |
| MroI | TCCGGA | 1 cut(s) | 1336 |
| MscI | TGGCCA | 1 cut(s) | 1454 |
| MseI | TTAA | 4 cut(s) | 210, 828, 1919, 1923 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1486, 1572, 1821, 2151 |
| Msp20I | TGGCCA | 1 cut(s) | 1454 |
| MspA1I | CMGCKG | 1 cut(s) | 1688 |
| MspI | CCGG | 4 cut(s) | 1036, 1337, 1707, 2194 |
| MspR9I | CCNGG | 5 cut(s) | 329, 1037, 1299, 1371, 1697 |
| Mva1269I | GAATGC | 2 cut(s) | 194, 2138 |
| MvaI | CCWGG | 4 cut(s) | 329, 1299, 1371, 1697 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 459, 2133 |
| NciI | CCSGG | 1 cut(s) | 1037 |
| NcoI | CCATGG | 2 cut(s) | 79, 1955 |
| NlaIV | GGNNCC | 7 cut(s) | 7, 550, 759, 787, 1053, 1642, 1844 |
| NmuCI | GTSAC | 2 cut(s) | 839, 866 |
| NsiI | ATGCAT | 1 cut(s) | 1870 |
| NspI | RCATGY | 3 cut(s) | 874, 1837, 1970 |
| NspV | TTCGAA | 1 cut(s) | 1515 |
| OliI | CACNNNNGTG | 1 cut(s) | 1486 |
| PacI | TTAATTAA | 1 cut(s) | 1923 |
| PaeI | GCATGC | 1 cut(s) | 1970 |
| PagI | TCATGA | 2 cut(s) | 697, 2017 |
| PciI | ACATGT | 1 cut(s) | 870 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 321 |
| PctI | GAATGC | 2 cut(s) | 194, 2138 |
| PfeI | GAWTC | 2 cut(s) | 1103, 1512 |
| PflFI | GACNNNGTC | 2 cut(s) | 172, 845 |
| PfoI | TCCNGGA | 1 cut(s) | 327 |
| PinAI | ACCGGT | 1 cut(s) | 2193 |
| PkrI | GCNGC | 4 cut(s) | 1203, 1687, 1761, 2188 |
| PleI | GAGTC | 4 cut(s) | 53, 67, 119, 2036 |
| PpsI | GAGTC | 4 cut(s) | 53, 67, 119, 2036 |
| PscI | ACATGT | 1 cut(s) | 870 |
| PshBI | ATTAAT | 1 cut(s) | 828 |
| Psp6I | CCWGG | 4 cut(s) | 327, 1297, 1369, 1695 |
| PspFI | CCCAGC | 2 cut(s) | 668, 1721 |
| PspGI | CCWGG | 4 cut(s) | 327, 1297, 1369, 1695 |
| PspN4I | GGNNCC | 7 cut(s) | 7, 550, 759, 787, 1053, 1642, 1844 |
| PspPI | GGNCC | 1 cut(s) | 1033 |
| PstI | CTGCAG | 2 cut(s) | 1687, 2014 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1370 |
| PsuI | RGATCY | 2 cut(s) | 118, 757 |
| PsyI | GACNNNGTC | 2 cut(s) | 172, 845 |
| PvuII | CAGCTG | 1 cut(s) | 1688 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1486, 1572, 1821, 2151 |
| SaqAI | TTAA | 4 cut(s) | 210, 828, 1919, 1923 |
| SatI | GCNGC | 4 cut(s) | 1202, 1686, 1760, 2187 |
| Sau96I | GGNCC | 1 cut(s) | 1033 |
| ScaI | AGTACT | 2 cut(s) | 278, 1928 |
| SchI | GAGTC | 4 cut(s) | 54, 68, 119, 2037 |
| ScrFI | CCNGG | 5 cut(s) | 329, 1037, 1299, 1371, 1697 |
| SduI | GDGCHC | 5 cut(s) | 8, 19, 30, 1810, 2084 |
| SexAI | ACCWGGT | 1 cut(s) | 1695 |
| SfaNI | GCATC | 6 cut(s) | 477, 655, 943, 1003, 1213, 2234 |
| SfcI | CTRYAG | 4 cut(s) | 798, 1169, 1683, 2010 |
| SfuI | TTCGAA | 1 cut(s) | 1515 |
| SinI | GGWCC | 1 cut(s) | 1033 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1486, 1572, 1821, 2151 |
| SmlI | CTYRAG | 1 cut(s) | 1147 |
| SmoI | CTYRAG | 1 cut(s) | 1147 |
| SphI | GCATGC | 1 cut(s) | 1970 |
| SsiI | CCGC | 2 cut(s) | 49, 490 |
| SspMI | CTAG | 3 cut(s) | 20, 42, 1811 |
| StyD4I | CCNGG | 5 cut(s) | 327, 1035, 1297, 1369, 1695 |
| StyI | CCWWGG | 2 cut(s) | 79, 1955 |
| TaiI | ACGT | 6 cut(s) | 27, 318, 327, 1074, 1255, 2048 |
| TaqI | TCGA | 7 cut(s) | 69, 234, 510, 942, 1515, 1737, 2026 |
| TatI | WGTACW | 7 cut(s) | 148, 276, 432, 1096, 1165, 1555, 1926 |
| TfiI | GAWTC | 2 cut(s) | 1103, 1512 |
| Tru1I | TTAA | 4 cut(s) | 210, 828, 1919, 1923 |
| Tru9I | TTAA | 4 cut(s) | 210, 828, 1919, 1923 |
| TscAI | CASTG | 7 cut(s) | 301, 385, 469, 991, 1270, 1319, 1546 |
| TseFI | GTSAC | 2 cut(s) | 839, 866 |
| TseI | GCWGC | 4 cut(s) | 1201, 1685, 1759, 2186 |
| Tsp45I | GTSAC | 2 cut(s) | 839, 866 |
| TspDTI | ATGAA | 7 cut(s) | 228, 623, 1358, 1399, 1666, 2194, 2196 |
| TspGWI | ACGGA | 1 cut(s) | 1589 |
| TspRI | CASTG | 7 cut(s) | 301, 385, 469, 991, 1270, 1319, 1546 |
| Tth111I | GACNNNGTC | 2 cut(s) | 172, 845 |
| VneI | GTGCAC | 1 cut(s) | 1806 |
| VpaK11BI | GGWCC | 1 cut(s) | 1033 |
| VspI | ATTAAT | 1 cut(s) | 828 |
| XapI | RAATTY | 5 cut(s) | 571, 854, 1186, 1332, 1907 |
| XceI | RCATGY | 3 cut(s) | 874, 1837, 1970 |
| XspI | CTAG | 3 cut(s) | 20, 42, 1811 |
| ZrmI | AGTACT | 2 cut(s) | 278, 1928 |
| Zsp2I | ATGCAT | 1 cut(s) | 1870 |