Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0006317

Physical Location & Seq

Genomic Coordinates Reverse (-)

37114443 .. 37120459

Gene Structure 6017 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00357480.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

ATGTACGTGTTCTACTACAAGAGCAACATTGAGCATCTCAACGAACAGGTTCTGCTGCTGCGTGACAAAAGAGACCTGGACGTGACAGATGCTAGACGAGCTCTACGGGAGATTAGTCCCGGAGTTGATCGCTGGCTCAGTGATGTAGACAAGATTATAGTAGAAGAGGAGATGAGTTTCAGTGAAGAAACTGTAGCAGCAAAGGCAGCGTGCTGTAATGGGTGGTTGCCAAATTTGAAGTGTCGTCATTCTTTGGGAAGGAAAGGTAAGAAGATGACTGAGAAGGTGGATAATCTTCTTGCTAGTGAACCCAGGGCTATAGCGCATCCTGCTGCTCCCCCAAAGCCACCTGCATCTGAAGGAAATAATATTAATTTTGATTCAAGAAGATCAACCATTAGAGATGTGATGGAAGCTCTCAAGGGGAATCAATTCAATCCGATTATTATATGCGGCATGGGCGGCATCGGGAAGACGACATTGATGGGGCAAGTTTTTGAGAAAGCAAAGGAAGAAGGTCTGTTCGATGAGTATACAAAGGCAACCCTATCTCTTGAAAAGGCTCCTGATGTGATTCAGATTCAAGAAGAACTTGCTCGATATCTAGGCCTGCCACTTGAAGGAAAAGAGAGTGGTCTAAGAGCAAATCTATTCAAGGACATGGACACAAGATCTGACGTCGTCGTTTCATCCTCAAATCCTAGAATGGGATCCCTCGGTGCCCTAGACCTACGTTTGAAGTACCCTAGCGTCCGCCGAGATGAGTCGGTCGTCGATGACTACCATGGCGTCAAGGTTGCCGATCCTTATAGATGGCTTGAAGATCCTGATTCGGAAGAGACGAAGGAATTTGTACAGAAACAAGTGGAATTGACGCAGTCGGTGCTGAAGGAATGCGATGATGTCAGAGGGAAGCTATCTGATAAAATCACCAAGCTGTTTGATCAGCCACGCTATGATCCACCTTTTCGGAGAGGGAGCAAGTACTTCTACTCCCATAACACCGGGCTTCAAGCTCAAAACGTGCTCTCTGTGCAGGATAGTTTGGATGGAGAACCGGAGGTTTTGCTTGATCCTCATACGCTTAGTGAAGATGGGACAGTAGCTTTGAGTACATGCTCAGTAAGTGAGGATGCCAAGTACTTGGCCTATGCCCTTAGTACAAGTGGCAGTGATTGGGTAACAATTAAAGTGATGCGCGTTGAGGATAAGAAGGTGGAGCCAGAAAATTTATCTTGGGTCAAGTTTTCTGGAATTAGTTGGACACATGATAACAAAGGGTTTTTCTATAGCCGCTATCCAGCTCCAAAAGAAGGAGAGGACATTGACGCTGGCACAGAGACGGACGCAAATCTTTATCATGAGTTATACTACCATTTTGTGGGTACGGATCAATCAAAAGACATATTATGCTGGAAAGATTCTGAAAATCCCAAATACTTGTTTGAAGCCACTGTTACTGATGATGGGAAGTATGCTCTTATATATATTGAAGAGGGTTGTGACCCAGTCAACAAATTTTACTACTGTGACATGGCTGCACTTCCTAATGGGCTTGAAGGTCTGAGGTCGAAAAATGAGCTGCTTCCGGTTGTTAAGCTTGTTGATACATTTGAGGCACAGTATCGTGTGATTGCAAATGATGACACTGAACCAACTGTTTGGACTGACGTGGTTAAAGAATCTGAAAAAGACGTACTTGAATCGGCATCTGCTGTAAATGGTACCCAAATGATTGTTAGTTACTTGAGTGATGTGAAGAATGTTCCACAGATCAGGGATTTGAAATCGGGTAGCTTGGTGCATCAATTGCCCATTGACATTGGCTCAGTTACTGAAATTTCTGCAAGACGTGAAGATAGTACAATTTTTTTTCGCTTTACAAGCTTTGTTACACCGGGAGTAATATATCAGTGTAATTTAGACAATGAAGTTCCAGATATGAAGGTATTTCGCGAAATTACAGTTCCTGGGTTTGAGCGCACAGACTTCCATGTTGATCAGGTATTCATACCCAGTAAGGATGGCACTCAGATACCTATATATGTTGTGGCCAGAAAGAACATTATTTTGGATGGATCACACCCTTGTTTGTTATACGGATATGGTGGATTTAACATTAGTGTTAAGCCATCATTTAGTGTTAGTCGCATGGTACTTACAAGACATTTAGGTGTTGTTTACTGCCAAGCAAATATCCGTGGGGGTGGAGAGTATGGAGAGGAATGGCATAAGGCAGGCTCCCTATCAAAAAAGCAAAATTGCTTTGATGACTTCATTTCTGCTGGTGAATACCTTGTATCTGCTGGTTACACCCAACCTAGCAAGTTGTGCATAGAAGGTCGAAGTAATGGGGGCTTCTTATCGGGGCTTGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0016787 GO:0019538 GO:0033218 GO:0042277 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04614 map04614

Pfam Domains

Protein Families

Peptidase_S9 Peptidase_S9_N

Protein Analysis

792

Amino Acids

88.81

Weight (kDa)

5.06

Isoelectric Point (pI)

43.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NB-ARC	PF00931	131 - 206	6.1e-08	NB-ARC domain
Peptidase_S9_N	PF02897	249 - 645	2.5e-116	Prolyl oligopeptidase, N-terminal beta-propeller domain
Peptidase_S9	PF00326	711 - 791	7.7e-24	Prolyl oligopeptidase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006317)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20380 AT1G20380 AT1G76140 AT1G76140
fragaria_vesca	FvH4_2g37820 FvH4_2g37820 FvH4_2g37820 FvH4_2g37820
malus_domestica	MD08G1005500.v1.1 MD15G1004900.v1.1
prunus_persica	Prupe.1G357500_v2.0.a1 Prupe.1G357700_v2.0.a1 Prupe.1G357700_v2.0.a1 Prupe.1G357700_v2.0.a1
pyrus_communis	pycom15g00350
rosa_chinensis	RchiOBHm_Chr6g0303891
rosa_laevigata	RLG00000011037
rosa_multiflora	Rmu_sc0004644.1_g000008 Rmu_sc0007179.1_g000009
rosa_roxburghii	Rroxscaffold_5G00357480 Rroxscaffold_7G00164300
rosa_rugosa	Rorug06G0325600
rosa_samantha	Rh6AG439900 Rh6BG463100 Rh6CG452200 Rh6DG439100
rosa_wichuraiana	Rw6G038090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	358
AatII	GACGTC	1 cut(s)	681
Acc36I	ACCTGC	1 cut(s)	358
Acc65I	GGTACC	1 cut(s)	1724
AccB1I	GGYRCC	2 cut(s)	719, 1724
AccB7I	CCANNNNNTGG	1 cut(s)	1381
AccI	GTMKAC	2 cut(s)	147, 533
AccII	CGCG	2 cut(s)	1200, 1956
AciI	CCGC	4 cut(s)	453, 462, 754, 1294
AclWI	GGATC	8 cut(s)	705, 718, 797, 818, 953, 1067, 1398, 2086
AcoI	YGGCCR	1 cut(s)	2052
AcsI	RAATTY	5 cut(s)	232, 848, 1228, 1517, 1839
AcuI	CTGAAG	2 cut(s)	378, 908
AcyI	GRCGYC	2 cut(s)	678, 789
AfiI	CCNNNNNNNGG	4 cut(s)	620, 707, 1313, 1381
AflIII	ACRYGT	1 cut(s)	6
AjiI	CACGTC	3 cut(s)	82, 1672, 1853
AjnI	CCWGG	3 cut(s)	75, 311, 1969
AjuI	GAANNNNNNNTTGG	2 cut(s)	2054, 2086
Alw21I	GWGCWC	2 cut(s)	103, 1029
Alw26I	GTCTC	3 cut(s)	66, 833, 1334
AlwI	GGATC	8 cut(s)	705, 718, 797, 818, 953, 1067, 1398, 2086
AlwNI	CAGNNNCTG	3 cut(s)	52, 1835, 1970
AoxI	GGCC	3 cut(s)	607, 1146, 2052
ApeKI	GCWGC	7 cut(s)	55, 58, 197, 206, 332, 1538, 1582
ApoI	RAATTY	5 cut(s)	232, 848, 1228, 1517, 1839
ArsI	GACNNNNNNTTYG	2 cut(s)	1090, 1122
AseI	ATTAAT	1 cut(s)	372
Asp700I	GAANNNNTTC	2 cut(s)	48, 431
Asp718I	GGTACC	1 cut(s)	1724
AspLEI	GCGC	3 cut(s)	325, 1200, 1983
AsuC2I	CCSGG	3 cut(s)	120, 1006, 1899
AsuHPI	GGTGA	2 cut(s)	922, 2300
BaeGI	GKGCMC	1 cut(s)	724
BalI	TGGCCA	1 cut(s)	2054
BamHI	GGATCC	1 cut(s)	710
BanI	GGYRCC	2 cut(s)	719, 1724
BanII	GRGCYC	1 cut(s)	103
BbsI	GAAGAC	1 cut(s)	479
Bbv12I	GWGCWC	2 cut(s)	103, 1029
BbvI	GCAGC	7 cut(s)	42, 45, 209, 218, 319, 1525, 1569
BccI	CCATC	9 cut(s)	403, 478, 807, 1043, 1088, 1460, 2018, 2069, 2140
BciT130I	CCWGG	3 cut(s)	77, 313, 1971
BclI	TGATCA	2 cut(s)	943, 1999
BcnI	CCSGG	3 cut(s)	120, 1006, 1899
BcoDI	GTCTC	3 cut(s)	66, 833, 1334
BfaI	CTAG	7 cut(s)	93, 303, 605, 702, 725, 747, 2322
BfmI	CTRYAG	3 cut(s)	192, 318, 1288
BfuAI	ACCTGC	1 cut(s)	358
BglII	AGATCT	1 cut(s)	671
BmcAI	AGTACT	2 cut(s)	986, 1142
Bme1390I	CCNGG	6 cut(s)	77, 120, 313, 1006, 1899, 1971
BmgBI	CACGTC	3 cut(s)	82, 1672, 1853
BmiI	GGNNCC	6 cut(s)	564, 712, 721, 1221, 1726, 2242
BmrFI	CCNGG	6 cut(s)	77, 120, 313, 1006, 1899, 1971
BmrI	ACTGGG	2 cut(s)	1502, 2010
BmsI	GCATC	9 cut(s)	43, 79, 334, 362, 474, 1123, 1185, 1718, 1813
BmuI	ACTGGG	2 cut(s)	1502, 2010
BpiI	GAAGAC	1 cut(s)	479
BpuEI	CTTGAG	2 cut(s)	404, 1768
BpuMI	CCSGG	3 cut(s)	120, 1006, 1899
BsaAI	YACGTR	1 cut(s)	7
BsaHI	GRCGYC	2 cut(s)	678, 789
BsaI	GGTCTC	1 cut(s)	66
BsaJI	CCNNGG	6 cut(s)	311, 312, 715, 784, 1970, 2200
BsaWI	WCCGGW	2 cut(s)	1057, 1588
BsaXI	ACNNNNNCTCC	2 cut(s)	977, 1007
Bsc4I	CCNNNNNNNGG	4 cut(s)	620, 707, 1313, 1381
Bse1I	ACTGG	2 cut(s)	1508, 2016
BseBI	CCWGG	3 cut(s)	77, 313, 1971
BseDI	CCNNGG	6 cut(s)	311, 312, 715, 784, 1970, 2200
BseGI	GGATG	6 cut(s)	325, 689, 1054, 1138, 2029, 2080
BseLI	CCNNNNNNNGG	4 cut(s)	620, 707, 1313, 1381
BseMII	CTCAG	6 cut(s)	151, 270, 1134, 1556, 1842, 2045
BseNI	ACTGG	2 cut(s)	1508, 2016
BseRI	GAGGAG	1 cut(s)	182
BseSI	GKGCMC	1 cut(s)	724
BseXI	GCAGC	7 cut(s)	42, 45, 209, 218, 319, 1525, 1569
BsgI	GTGCAG	2 cut(s)	1055, 1524
Bsh1236I	CGCG	2 cut(s)	1200, 1956
Bsh1285I	CGRYCG	1 cut(s)	771
BshFI	GGCC	3 cut(s)	609, 1148, 2054
BshNI	GGYRCC	2 cut(s)	719, 1724
BsiEI	CGRYCG	1 cut(s)	771
BsiHKAI	GWGCWC	2 cut(s)	103, 1029
BsiSI	CCGG	5 cut(s)	120, 1005, 1058, 1589, 1898
BslFI	GGGAC	2 cut(s)	102, 1111
BslI	CCNNNNNNNGG	4 cut(s)	620, 707, 1313, 1381
BsmAI	GTCTC	3 cut(s)	66, 833, 1334
BsmBI	CGTCTC	2 cut(s)	833, 1334
BsmFI	GGGAC	2 cut(s)	102, 1111
BsmI	GAATGC	1 cut(s)	899
BsnI	GGCC	3 cut(s)	609, 1148, 2054
Bso31I	GGTCTC	1 cut(s)	66
Bsp1286I	GDGCHC	3 cut(s)	103, 724, 1029
Bsp1407I	TGTACA	1 cut(s)	853
Bsp19I	CCATGG	1 cut(s)	784
Bsp68I	TCGCGA	1 cut(s)	1956
BspACI	CCGC	4 cut(s)	453, 462, 754, 1294
BspANI	GGCC	3 cut(s)	609, 1148, 2054
BspCNI	CTCAG	6 cut(s)	150, 271, 1133, 1557, 1841, 2044
BspFNI	CGCG	2 cut(s)	1200, 1956
BspHI	TCATGA	1 cut(s)	1360
BspLI	GGNNCC	6 cut(s)	564, 712, 721, 1221, 1726, 2242
BspMI	ACCTGC	1 cut(s)	358
BspPI	GGATC	8 cut(s)	705, 718, 797, 818, 953, 1067, 1398, 2086
BspT107I	GGYRCC	2 cut(s)	719, 1724
BspTNI	GGTCTC	1 cut(s)	66
BsrGI	TGTACA	1 cut(s)	853
BsrI	ACTGG	2 cut(s)	1508, 2016
BssECI	CCNNGG	6 cut(s)	311, 312, 715, 784, 1970, 2200
BssNAI	GTATAC	1 cut(s)	534
BssNI	GRCGYC	2 cut(s)	678, 789
BssT1I	CCWWGG	1 cut(s)	784
Bst1107I	GTATAC	1 cut(s)	534
Bst2UI	CCWGG	3 cut(s)	77, 313, 1971
Bst4CI	ACNGT	7 cut(s)	193, 1102, 1456, 1529, 1623, 1660, 1966
Bst6I	CTCTTC	3 cut(s)	159, 831, 1488
BstACI	GRCGYC	2 cut(s)	678, 789
BstAPI	GCANNNNNTGC	3 cut(s)	883, 1810, 2331
BstAUI	TGTACA	1 cut(s)	853
BstBAI	YACGTR	1 cut(s)	7
BstC8I	GCNNGC	6 cut(s)	134, 211, 611, 1333, 2239, 2373
BstDEI	CTNAG	9 cut(s)	137, 279, 638, 1085, 1120, 1157, 1565, 1828, 2031
BstDSI	CCRYGG	2 cut(s)	784, 2200
BstF5I	GGATG	6 cut(s)	325, 689, 1054, 1138, 2029, 2080
BstFNI	CGCG	2 cut(s)	1200, 1956
BstHHI	GCGC	3 cut(s)	325, 1200, 1983
BstMAI	GTCTC	3 cut(s)	66, 833, 1334
BstMCI	CGRYCG	1 cut(s)	771
BstNI	CCWGG	3 cut(s)	77, 313, 1971
BstNSI	RCATGY	1 cut(s)	1119
BstSCI	CCNGG	6 cut(s)	75, 118, 311, 1004, 1897, 1969
BstSFI	CTRYAG	3 cut(s)	192, 318, 1288
BstSLI	GKGCMC	1 cut(s)	724
BstUI	CGCG	2 cut(s)	1200, 1956
BstV1I	GCAGC	7 cut(s)	42, 45, 209, 218, 319, 1525, 1569
BstV2I	GAAGAC	1 cut(s)	479
BstX2I	RGATCY	3 cut(s)	671, 710, 823
BstXI	CCANNNNNNTGG	2 cut(s)	1144, 1662
BstYI	RGATCY	3 cut(s)	671, 710, 823
BstZ17I	GTATAC	1 cut(s)	534
BsuRI	GGCC	3 cut(s)	609, 1148, 2054
BtgI	CCRYGG	2 cut(s)	784, 2200
BtgZI	GCGATG	1 cut(s)	912
BtrI	CACGTC	3 cut(s)	82, 1672, 1853
BtsCI	GGATG	6 cut(s)	325, 689, 1054, 1138, 2029, 2080
BtsI	GCAGTG	1 cut(s)	1177
BtsIMutI	CAGTG	6 cut(s)	145, 187, 1177, 1452, 1647, 1919
BtuMI	TCGCGA	1 cut(s)	1956
BveI	ACCTGC	1 cut(s)	358
Cac8I	GCNNGC	6 cut(s)	134, 211, 611, 1333, 2239, 2373
CaiI	CAGNNNCTG	3 cut(s)	52, 1835, 1970
CciI	TCATGA	1 cut(s)	1360
CfoI	GCGC	3 cut(s)	325, 1200, 1983
CseI	GACGC	5 cut(s)	739, 778, 883, 1337, 1355
CviAII	CATG	9 cut(s)	457, 661, 785, 1116, 1268, 1361, 1534, 1994, 2152
DdeI	CTNAG	9 cut(s)	137, 279, 638, 1085, 1120, 1157, 1565, 1828, 2031
EaeI	YGGCCR	1 cut(s)	2052
Eam1104I	CTCTTC	3 cut(s)	159, 831, 1488
EarI	CTCTTC	3 cut(s)	159, 831, 1488
EciI	GGCGGA	1 cut(s)	743
Ecl136II	GAGCTC	1 cut(s)	101
Eco130I	CCWWGG	1 cut(s)	784
Eco147I	AGGCCT	1 cut(s)	609
Eco24I	GRGCYC	1 cut(s)	103
Eco31I	GGTCTC	1 cut(s)	66
Eco32I	GATATC	1 cut(s)	602
Eco53kI	GAGCTC	1 cut(s)	101
Eco57I	CTGAAG	2 cut(s)	378, 908
EcoICRI	GAGCTC	1 cut(s)	101
EcoRII	CCWGG	3 cut(s)	75, 311, 1969
EcoRV	GATATC	1 cut(s)	602
EcoT14I	CCWWGG	1 cut(s)	784
EcoT38I	GRGCYC	1 cut(s)	103
ErhI	CCWWGG	1 cut(s)	784
Esp3I	CGTCTC	2 cut(s)	833, 1334
FaeI	CATG	9 cut(s)	460, 664, 788, 1119, 1271, 1364, 1537, 1997, 2155
FalI	AAGNNNNNCTT	4 cut(s)	576, 608, 1683, 1715
FaqI	GGGAC	2 cut(s)	102, 1111
FatI	CATG	9 cut(s)	456, 660, 784, 1115, 1267, 1360, 1533, 1993, 2151
FbaI	TGATCA	2 cut(s)	943, 1999
FblI	GTMKAC	2 cut(s)	147, 533
FokI	GGATG	6 cut(s)	312, 676, 1061, 1145, 2036, 2087
FriOI	GRGCYC	1 cut(s)	103
FspBI	CTAG	7 cut(s)	93, 303, 605, 702, 725, 747, 2322
GlaI	GCGC	3 cut(s)	324, 1199, 1982
HaeIII	GGCC	3 cut(s)	609, 1148, 2054
HapII	CCGG	5 cut(s)	120, 1005, 1058, 1589, 1898
HgaI	GACGC	5 cut(s)	739, 778, 883, 1337, 1355
HhaI	GCGC	3 cut(s)	325, 1200, 1983
Hin1I	GRCGYC	2 cut(s)	678, 789
Hin1II	CATG	9 cut(s)	460, 664, 788, 1119, 1271, 1364, 1537, 1997, 2155
Hin6I	GCGC	3 cut(s)	323, 1198, 1981
HinP1I	GCGC	3 cut(s)	323, 1198, 1981
HincII	GTYRAC	1 cut(s)	1513
HindII	GTYRAC	1 cut(s)	1513
HindIII	AAGCTT	2 cut(s)	1598, 1885
HinfI	GANTC	9 cut(s)	380, 427, 574, 580, 764, 830, 1421, 1682, 1703
HpaII	CCGG	5 cut(s)	120, 1005, 1058, 1589, 1898
HphI	GGTGA	2 cut(s)	922, 2300
Hpy166II	GTNNAC	5 cut(s)	148, 308, 534, 1513, 2182
Hpy8I	GTNNAC	5 cut(s)	148, 308, 534, 1513, 2182
Hpy99I	CGWCG	3 cut(s)	683, 686, 776
HpyCH4III	ACNGT	7 cut(s)	193, 1102, 1456, 1529, 1623, 1660, 1966
HpyCH4IV	ACGT	8 cut(s)	6, 81, 678, 733, 1023, 1671, 1695, 1852
HpyCH4V	TGCA	8 cut(s)	353, 1036, 1541, 1637, 1804, 1847, 2334, 2375
HpyF3I	CTNAG	9 cut(s)	137, 279, 638, 1085, 1120, 1157, 1565, 1828, 2031
HpySE526I	ACGT	8 cut(s)	6, 81, 678, 733, 1023, 1671, 1695, 1852
Hsp92I	GRCGYC	2 cut(s)	678, 789
Hsp92II	CATG	9 cut(s)	460, 664, 788, 1119, 1271, 1364, 1537, 1997, 2155
HspAI	GCGC	3 cut(s)	323, 1198, 1981
KpnI	GGTACC	1 cut(s)	1728
Ksp22I	TGATCA	2 cut(s)	943, 1999
LmnI	GCTCC	6 cut(s)	340, 568, 978, 1219, 1309, 2246
Lsp1109I	GCAGC	7 cut(s)	42, 45, 209, 218, 319, 1525, 1569
LweI	GCATC	9 cut(s)	43, 79, 334, 362, 474, 1123, 1185, 1718, 1813
MaeI	CTAG	7 cut(s)	93, 303, 605, 702, 725, 747, 2322
MaeII	ACGT	8 cut(s)	6, 81, 678, 733, 1023, 1671, 1695, 1852
MfeI	CAATTG	1 cut(s)	1808
MflI	RGATCY	3 cut(s)	671, 710, 823
MhlI	GDGCHC	3 cut(s)	103, 724, 1029
MlsI	TGGCCA	1 cut(s)	2054
MluNI	TGGCCA	1 cut(s)	2054
MlyI	GAGTC	1 cut(s)	773
MmeI	TCCRAC	1 cut(s)	1241
Mox20I	TGGCCA	1 cut(s)	2054
MroXI	GAANNNNTTC	2 cut(s)	48, 431
MscI	TGGCCA	1 cut(s)	2054
MseI	TTAA	6 cut(s)	372, 1188, 1596, 1677, 2115, 2127
MslI	CAYNNNNRTG	1 cut(s)	2172
Msp20I	TGGCCA	1 cut(s)	2054
MspI	CCGG	5 cut(s)	120, 1005, 1058, 1589, 1898
MspR9I	CCNGG	6 cut(s)	77, 120, 313, 1006, 1899, 1971
MunI	CAATTG	1 cut(s)	1808
Mva1269I	GAATGC	1 cut(s)	899
MvaI	CCWGG	3 cut(s)	77, 313, 1971
MvnI	CGCG	2 cut(s)	1200, 1956
NciI	CCSGG	3 cut(s)	120, 1006, 1899
NcoI	CCATGG	1 cut(s)	784
NlaIII	CATG	9 cut(s)	460, 664, 788, 1119, 1271, 1364, 1537, 1997, 2155
NlaIV	GGNNCC	6 cut(s)	564, 712, 721, 1221, 1726, 2242
NmeAIII	GCCGAG	1 cut(s)	782
NmuCI	GTSAC	4 cut(s)	62, 82, 1502, 1529
NruI	TCGCGA	1 cut(s)	1956
NspI	RCATGY	1 cut(s)	1119
PagI	TCATGA	1 cut(s)	1360
PaqCI	CACCTGC	1 cut(s)	358
PasI	CCCWGGG	1 cut(s)	312
PceI	AGGCCT	1 cut(s)	609
PcsI	WCGNNNNNNNCGW	1 cut(s)	839
PctI	GAATGC	1 cut(s)	899
PdmI	GAANNNNTTC	2 cut(s)	48, 431
PfeI	GAWTC	8 cut(s)	380, 427, 574, 580, 830, 1421, 1682, 1703
PflFI	GACNNNGTC	3 cut(s)	680, 877, 1508
PflMI	CCANNNNNTGG	1 cut(s)	1381
PfoI	TCCNGGA	1 cut(s)	118
PleI	GAGTC	1 cut(s)	772
PpsI	GAGTC	1 cut(s)	772
Ppu21I	YACGTR	1 cut(s)	7
PshBI	ATTAAT	1 cut(s)	372
Psp124BI	GAGCTC	1 cut(s)	103
Psp6I	CCWGG	3 cut(s)	75, 311, 1969
PspGI	CCWGG	3 cut(s)	75, 311, 1969
PspN4I	GGNNCC	6 cut(s)	564, 712, 721, 1221, 1726, 2242
PstNI	CAGNNNCTG	3 cut(s)	52, 1835, 1970
PsuI	RGATCY	3 cut(s)	671, 710, 823
PsyI	GACNNNGTC	3 cut(s)	680, 877, 1508
RruI	TCGCGA	1 cut(s)	1956
RseI	CAYNNNNRTG	1 cut(s)	2172
SacI	GAGCTC	1 cut(s)	103
SaqAI	TTAA	6 cut(s)	372, 1188, 1596, 1677, 2115, 2127
ScaI	AGTACT	2 cut(s)	986, 1142
SchI	GAGTC	1 cut(s)	773
ScrFI	CCNGG	6 cut(s)	77, 120, 313, 1006, 1899, 1971
SduI	GDGCHC	3 cut(s)	103, 724, 1029
SfaNI	GCATC	9 cut(s)	43, 79, 334, 362, 474, 1123, 1185, 1718, 1813
SfcI	CTRYAG	3 cut(s)	192, 318, 1288
SmiMI	CAYNNNNRTG	1 cut(s)	2172
SmlI	CTYRAG	2 cut(s)	419, 1747
SmoI	CTYRAG	2 cut(s)	419, 1747
SseBI	AGGCCT	1 cut(s)	609
SsiI	CCGC	4 cut(s)	453, 462, 754, 1294
SspI	AATATT	1 cut(s)	370
SspMI	CTAG	7 cut(s)	93, 303, 605, 702, 725, 747, 2322
SstI	GAGCTC	1 cut(s)	103
StuI	AGGCCT	1 cut(s)	609
StyD4I	CCNGG	6 cut(s)	75, 118, 311, 1004, 1897, 1969
StyI	CCWWGG	1 cut(s)	784
TaaI	ACNGT	7 cut(s)	193, 1102, 1456, 1529, 1623, 1660, 1966
TaiI	ACGT	8 cut(s)	9, 84, 681, 736, 1026, 1674, 1698, 1855
TaqI	TCGA	5 cut(s)	525, 598, 774, 1571, 2344
TaqII	GACCGA	1 cut(s)	757
TatI	WGTACW	6 cut(s)	853, 984, 1112, 1140, 1160, 1862
TauI	GCSGC	3 cut(s)	456, 465, 1296
TfiI	GAWTC	8 cut(s)	380, 427, 574, 580, 830, 1421, 1682, 1703
Tru1I	TTAA	6 cut(s)	372, 1188, 1596, 1677, 2115, 2127
Tru9I	TTAA	6 cut(s)	372, 1188, 1596, 1677, 2115, 2127
TscAI	CASTG	6 cut(s)	145, 187, 1177, 1459, 1654, 1919
TseFI	GTSAC	4 cut(s)	62, 82, 1502, 1529
TseI	GCWGC	7 cut(s)	55, 58, 197, 206, 332, 1538, 1582
Tsp45I	GTSAC	4 cut(s)	62, 82, 1502, 1529
TspDTI	ATGAA	5 cut(s)	678, 1944, 1958, 1999, 2266
TspGWI	ACGGA	4 cut(s)	1358, 1403, 2115, 2189
TspRI	CASTG	6 cut(s)	145, 187, 1177, 1459, 1654, 1919
Tth111I	GACNNNGTC	3 cut(s)	680, 877, 1508
Van91I	CCANNNNNTGG	1 cut(s)	1381
VspI	ATTAAT	1 cut(s)	372
XapI	RAATTY	5 cut(s)	232, 848, 1228, 1517, 1839
XceI	RCATGY	1 cut(s)	1119
XmiI	GTMKAC	2 cut(s)	147, 533
XmnI	GAANNNNTTC	2 cut(s)	48, 431
XspI	CTAG	7 cut(s)	93, 303, 605, 702, 725, 747, 2322
ZraI	GACGTC	1 cut(s)	679
ZrmI	AGTACT	2 cut(s)	986, 1142

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.