Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0007656

Physical Location & Seq

Genomic Coordinates Forward (+)

3754632 .. 3758691

Gene Structure 4060 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1055600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGATGGAGTCCGAAAATGCTGCCGACGACTCCTCCGCGGTGGCCAGCCTCCTCCCGTTGGCCTCCGCCTCCCAGCAACCCTACGTCTCCGAGCTCCTCTCCTTCACCCTCGATCGCCTCCACAAGGAACCGGAGCTTCTCCGGGTCGATGCGGAGCGAATACAGCGGCAAATGCAGGAGGTGGCGGTGGCCAATTACCGAGCTTTCATTGCTGCTTCCGACGCGTTGGTCGCAATTCGAAACGAAGTGTCTTCCATTGACAAACATCTCGAGTCTCTGGTACTGGAGGAGACGCCGAAGTTGATGAATGGGTGCACTGAGTTTGTTGAATCTGCGGAGCAGATTTTGGAAAAGAGGAAATTGAACCAGACGTTGCTAGCCAATCACAGTACATTGCTCGACTTACTTGAAATCCCTCAGCTTATGGAGACATGTGTGAGGAATGGAAATTACGATGAAGCTCTTGACTTAGAAGCATTTGTTAGCAAACTTTCAACCATGCACCCCAAATTGCCCGTTATTCAAGCTTTGACTGCAGAAGTCAGGCAGACCACTCAATCTCTTCTTTCTCAACTTCTTCAGAAACTTCGTTCAAATATTCAGTTACCTGAATGTCTCCGTATTATTGGATATTTACGTAGAATAGGAGTTTTTAGTGAGTATGAAATGCGTTTACAGTTTTTGAGATGTCGGGAGGCATGGCTTACTGGAATTCTGGAGGATCTGGACCAGAGAAATGCTTATGAGTACCTGAAGGGGATGATAAATTGTCATAGAATGCATCTTTTTGATGTTGTTAACCAATATAGAGCAATATTTGCTGATGATACATCAGGCAGTGAAGAAAATTATGACGGTGGTCTTCTTTTCAGTTGGGCTATGCATATAATTACTTCACACCTTAAGACTCTTAAAATTCTGCTTCCAAAGATAACTGAAGGCGGATCTCTATCAAATATCTTGGATCAATGCATGTATTGTGCTATGGGACTTGGTTGGGTTGGGCTAGATTTCCGGGGCTTGCTGCCATCACTGTTTGAAGAGGCAGTTCTCAACTTGTTCTCAAAAAACATGAGCACAGCAGTTGAGAATTTTGAGGTGGTCTTGGATTCACATCGTTGGGTCCCACTACCAGCAGTTGGCTTTTCATCGAACAGTCATGGTGATGAAAATCAGGATGATGTAACCCCGCCATCTTATCTTATGGAACATCCACCTCTTGCTGTTTTTGTTAATGGCGTGTCTGCAGGGATGAACGACCTCCGCCCCTGTGCCCCAATAAGTTTAAAGCATGTGCTTGCTCAAGAGTTGATCAAGGGATTGCAGGCTGTTTCTGATTCTCTACTGCGGTACAATACAAATCGGATGCTGAAAGAACACGAATCTGGACTTTTCCTCTCACTTTGTCGAGCATTTATTGAGGTTACTTACCCGCACTGTGCCACATGCTTTGGCCGCTGTTACCCTGGTGGAGCTGCTTTAATCATGGATGCAAAGAGTTTGTATGACGGGATTGGCCGCCTACTGACAGTCGCCACTCCATCAAGAGGACTCACGAAACCTGTTGGTGATGGAGACGGAGATGGAAATGAGAATGAGAATGAAAATGAAAAGAACGTAACTGAGAACGGTGACGTGTCTGCGGTAGAAAATGGGATCTCGCCGGTCGTTGAAGAAACCGATAATACCAACTCTGATGAGAGGGAACAGAAAAGCCCCACTTTGCAAACAGAGGAAGAGACGCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dor1

Protein Analysis

583

Amino Acids

64.86

Weight (kDa)

4.82

Isoelectric Point (pI)

44.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VPS51_Exo84_N	PF08700	22 - 93	5.3e-12	Vps51/EXO84/COG1 N-terminal
Dor1	PF04124	29 - 363	1e-132	Dor1-like family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007656)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11980 AT5G11980
fragaria_vesca	FvH4_2g31510 FvH4_2g31510 FvH4_2g31510
malus_domestica	MD08G1065800.v1.1 MD15G1055600.v1.1
prunus_persica	Prupe.1G408800_v2.0.a1
pyrus_communis	pycom08g05440 pycom15g05250 pycom15g05260
rosa_chinensis	RchiOBHm_Chr6g0311281
rosa_laevigata	RLG00000010422
rosa_multiflora	Rmu_sc0008536.1_g000003 Rmu_sc0013795.1_g000003
rosa_roxburghii	Rroxscaffold_7G00157800
rosa_rugosa	Rorug02G0372000 Rorug06G0387000
rosa_samantha	Rh6AG501700 Rh6BG512400 Rh6CG518100 Rh6DG504400 Rh7BG256700
rosa_wichuraiana	Rw6G043690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	227
AccB7I	CCANNNNNTGG	1 cut(s)	1139
AccII	CGCG	2 cut(s)	38, 224
AclWI	GGATC	4 cut(s)	729, 952, 972, 1664
AcoI	YGGCCR	4 cut(s)	42, 189, 1453, 1516
AcsI	RAATTY	3 cut(s)	711, 915, 1090
AcuI	CTGAAG	3 cut(s)	563, 773, 957
AcyI	GRCGYC	1 cut(s)	293
AfaI	GTAC	4 cut(s)	282, 391, 749, 1352
AfiI	CCNNNNNNNGG	4 cut(s)	58, 124, 1139, 1547
AflII	CTTAAG	1 cut(s)	902
AflIII	ACRYGT	3 cut(s)	222, 431, 1635
AgsI	TTSAA	8 cut(s)	329, 364, 410, 495, 524, 594, 1040, 1673
AjiI	CACGTC	1 cut(s)	1636
AjnI	CCWGG	1 cut(s)	1465
AluBI	AGCT	7 cut(s)	94, 136, 203, 421, 461, 527, 1475
AluI	AGCT	7 cut(s)	94, 136, 203, 421, 461, 527, 1475
Alw21I	GWGCWC	3 cut(s)	96, 317, 1079
Alw26I	GTCTC	7 cut(s)	91, 279, 284, 422, 620, 1569, 1733
Alw44I	GTGCAC	1 cut(s)	313
AlwI	GGATC	4 cut(s)	729, 952, 972, 1664
Ama87I	CYCGRG	1 cut(s)	269
AoxI	GGCC	5 cut(s)	42, 60, 189, 1453, 1516
ApaLI	GTGCAC	1 cut(s)	313
ApeKI	GCWGC	4 cut(s)	20, 212, 1024, 1475
ApoI	RAATTY	3 cut(s)	711, 915, 1090
AspS9I	GGNCC	2 cut(s)	727, 1123
AsuC2I	CCSGG	2 cut(s)	143, 1016
AsuHPI	GGTGA	4 cut(s)	97, 1175, 1580, 1643
AsuII	TTCGAA	1 cut(s)	238
AsuNHI	GCTAGC	1 cut(s)	376
AvaI	CYCGRG	1 cut(s)	269
AvaII	GGWCC	2 cut(s)	727, 1123
BaeGI	GKGCMC	2 cut(s)	317, 1276
BalI	TGGCCA	2 cut(s)	44, 191
BanII	GRGCYC	1 cut(s)	96
BbsI	GAAGAC	2 cut(s)	243, 854
Bbv12I	GWGCWC	3 cut(s)	96, 317, 1079
BbvCI	CCTCAGC	1 cut(s)	417
BbvI	GCAGC	4 cut(s)	7, 199, 1011, 1462
BccI	CCATC	5 cut(s)	1036, 1201, 1549, 1565, 1577
BcgI	CGANNNNNNTGC	1 cut(s)	36
BciT130I	CCWGG	1 cut(s)	1467
BclI	TGATCA	1 cut(s)	1311
BcnI	CCSGG	2 cut(s)	143, 1016
BcoDI	GTCTC	7 cut(s)	91, 279, 284, 422, 620, 1569, 1733
BfaI	CTAG	2 cut(s)	377, 1007
BfmI	CTRYAG	2 cut(s)	534, 1245
BfrI	CTTAAG	1 cut(s)	902
BisI	GCNGC	7 cut(s)	21, 167, 213, 1025, 1456, 1476, 1519
BlsI	GCNGC	7 cut(s)	22, 168, 214, 1026, 1457, 1477, 1520
Bme1390I	CCNGG	3 cut(s)	143, 1016, 1467
Bme18I	GGWCC	2 cut(s)	727, 1123
BmeT110I	CYCGRG	1 cut(s)	269
BmgBI	CACGTC	1 cut(s)	1636
BmgT120I	GGNCC	2 cut(s)	727, 1123
BmiI	GGNNCC	3 cut(s)	129, 1124, 1125
BmrFI	CCNGG	3 cut(s)	143, 1016, 1467
BmsI	GCATC	4 cut(s)	139, 790, 1356, 1480
BmtI	GCTAGC	1 cut(s)	380
BoxI	GACNNNNGTC	1 cut(s)	858
BpiI	GAAGAC	2 cut(s)	243, 854
BplI	GAGNNNNNCTC	2 cut(s)	83, 115
BpmI	CTGGAG	2 cut(s)	305, 737
Bpu10I	CCTNAGC	1 cut(s)	417
Bpu14I	TTCGAA	1 cut(s)	238
BpuEI	CTTGAG	1 cut(s)	1287
BpuMI	CCSGG	2 cut(s)	143, 1016
BsaAI	YACGTR	1 cut(s)	638
BsaBI	GATNNNNATC	3 cut(s)	949, 1113, 1170
BsaHI	GRCGYC	1 cut(s)	293
BsaJI	CCNNGG	3 cut(s)	36, 1015, 1465
BsaWI	WCCGGW	1 cut(s)	130
BsaXI	ACNNNNNCTCC	2 cut(s)	17, 47
Bsc4I	CCNNNNNNNGG	4 cut(s)	58, 124, 1139, 1547
Bse118I	RCCGGY	1 cut(s)	1663
Bse1I	ACTGG	2 cut(s)	288, 712
Bse3DI	GCAATG	2 cut(s)	207, 392
Bse8I	GATNNNNATC	3 cut(s)	949, 1113, 1170
BseBI	CCWGG	1 cut(s)	1467
BseDI	CCNNGG	3 cut(s)	36, 1015, 1465
BseGI	GGATG	6 cut(s)	765, 1183, 1210, 1257, 1371, 1495
BseJI	GATNNNNATC	3 cut(s)	949, 1113, 1170
BseLI	CCNNNNNNNGG	4 cut(s)	58, 124, 1139, 1547
BseMI	GCAATG	2 cut(s)	207, 392
BseMII	CTCAG	3 cut(s)	309, 431, 1614
BseNI	ACTGG	2 cut(s)	288, 712
BseRI	GAGGAG	4 cut(s)	22, 41, 86, 302
BseSI	GKGCMC	2 cut(s)	317, 1276
BseXI	GCAGC	4 cut(s)	7, 199, 1011, 1462
BseYI	CCCAGC	1 cut(s)	72
Bsh1236I	CGCG	2 cut(s)	38, 224
Bsh1285I	CGRYCG	2 cut(s)	115, 1668
BshFI	GGCC	5 cut(s)	44, 62, 191, 1455, 1518
BsiEI	CGRYCG	2 cut(s)	115, 1668
BsiHKAI	GWGCWC	3 cut(s)	96, 317, 1079
BsiHKCI	CYCGRG	1 cut(s)	269
BsiSI	CCGG	4 cut(s)	131, 142, 1015, 1664
BslFI	GGGAC	2 cut(s)	1002, 1109
BslI	CCNNNNNNNGG	4 cut(s)	58, 124, 1139, 1547
BsmAI	GTCTC	7 cut(s)	91, 279, 284, 422, 620, 1569, 1733
BsmBI	CGTCTC	4 cut(s)	91, 284, 1569, 1733
BsmFI	GGGAC	2 cut(s)	1002, 1109
BsmI	GAATGC	1 cut(s)	783
BsnI	GGCC	5 cut(s)	44, 62, 191, 1455, 1518
BsoBI	CYCGRG	1 cut(s)	269
Bsp119I	TTCGAA	1 cut(s)	238
Bsp1286I	GDGCHC	4 cut(s)	96, 317, 1079, 1276
Bsp143I	GATC	6 cut(s)	112, 721, 944, 964, 1311, 1656
BspANI	GGCC	5 cut(s)	44, 62, 191, 1455, 1518
BspCNI	CTCAG	3 cut(s)	310, 430, 1615
BspFNI	CGCG	2 cut(s)	38, 224
BspLI	GGNNCC	3 cut(s)	129, 1124, 1125
BspMAI	CTGCAG	2 cut(s)	538, 1249
BspOI	GCTAGC	1 cut(s)	380
BspPI	GGATC	4 cut(s)	729, 952, 972, 1664
BspT104I	TTCGAA	1 cut(s)	238
BspTI	CTTAAG	1 cut(s)	902
BsrDI	GCAATG	2 cut(s)	207, 392
BsrFI	RCCGGY	1 cut(s)	1663
BsrI	ACTGG	2 cut(s)	288, 712
BssAI	RCCGGY	1 cut(s)	1663
BssECI	CCNNGG	3 cut(s)	36, 1015, 1465
BssMI	GATC	6 cut(s)	112, 721, 944, 964, 1311, 1656
BssNI	GRCGYC	1 cut(s)	293
Bst2UI	CCWGG	1 cut(s)	1467
Bst4CI	ACNGT	8 cut(s)	389, 678, 857, 1035, 1157, 1439, 1531, 1631
Bst6I	CTCTTC	3 cut(s)	567, 1035, 1731
BstACI	GRCGYC	1 cut(s)	293
BstAFI	CTTAAG	1 cut(s)	902
BstAPI	GCANNNNNTGC	1 cut(s)	818
BstBAI	YACGTR	1 cut(s)	638
BstBI	TTCGAA	1 cut(s)	238
BstC8I	GCNNGC	5 cut(s)	46, 378, 1022, 1299, 1326
BstDEI	CTNAG	4 cut(s)	318, 417, 469, 1623
BstDSI	CCRYGG	1 cut(s)	36
BstENI	CCTNNNNNAGG	1 cut(s)	122
BstF5I	GGATG	6 cut(s)	765, 1183, 1210, 1257, 1371, 1495
BstFNI	CGCG	2 cut(s)	38, 224
BstKTI	GATC	6 cut(s)	115, 724, 947, 967, 1314, 1659
BstMAI	GTCTC	7 cut(s)	91, 279, 284, 422, 620, 1569, 1733
BstMBI	GATC	6 cut(s)	112, 721, 944, 964, 1311, 1656
BstMCI	CGRYCG	2 cut(s)	115, 1668
BstMWI	GCNNNNNNNGC	8 cut(s)	163, 172, 209, 221, 230, 533, 818, 1455
BstNI	CCWGG	1 cut(s)	1467
BstNSI	RCATGY	4 cut(s)	435, 976, 1295, 1449
BstPAI	GACNNNNGTC	1 cut(s)	858
BstSCI	CCNGG	3 cut(s)	141, 1014, 1465
BstSFI	CTRYAG	2 cut(s)	534, 1245
BstSLI	GKGCMC	2 cut(s)	317, 1276
BstSNI	TACGTA	1 cut(s)	638
BstUI	CGCG	2 cut(s)	38, 224
BstV1I	GCAGC	4 cut(s)	7, 199, 1011, 1462
BstV2I	GAAGAC	2 cut(s)	243, 854
BstX2I	RGATCY	3 cut(s)	721, 944, 1656
BstYI	RGATCY	3 cut(s)	721, 944, 1656
BsuRI	GGCC	5 cut(s)	44, 62, 191, 1455, 1518
BtgI	CCRYGG	1 cut(s)	36
BtrI	CACGTC	1 cut(s)	1636
BtsCI	GGATG	6 cut(s)	765, 1183, 1210, 1257, 1371, 1495
BtsI	GCAGTG	1 cut(s)	844
BtsIMutI	CAGTG	5 cut(s)	315, 844, 1031, 1435, 1744
Cac8I	GCNNGC	5 cut(s)	46, 378, 1022, 1299, 1326
Cfr10I	RCCGGY	1 cut(s)	1663
Cfr13I	GGNCC	2 cut(s)	727, 1123
Cfr42I	CCGCGG	1 cut(s)	39
CseI	GACGC	2 cut(s)	230, 301
Csp6I	GTAC	4 cut(s)	281, 390, 748, 1351
CspCI	CAANNNNNGTGG	2 cut(s)	1432, 1467
CviAII	CATG	9 cut(s)	432, 499, 699, 973, 1072, 1160, 1292, 1446, 1486
CviQI	GTAC	4 cut(s)	281, 390, 748, 1351
DdeI	CTNAG	4 cut(s)	318, 417, 469, 1623
DpnI	GATC	6 cut(s)	114, 723, 946, 966, 1313, 1658
DpnII	GATC	6 cut(s)	112, 721, 944, 964, 1311, 1656
DraI	TTTAAA	1 cut(s)	1287
DrdI	GACNNNNNNGTC	1 cut(s)	227
DseDI	GACNNNNNNGTC	1 cut(s)	227
EaeI	YGGCCR	4 cut(s)	42, 189, 1453, 1516
Eam1104I	CTCTTC	3 cut(s)	567, 1035, 1731
EarI	CTCTTC	3 cut(s)	567, 1035, 1731
EciI	GGCGGA	3 cut(s)	55, 957, 1253
Ecl136II	GAGCTC	1 cut(s)	94
Eco105I	TACGTA	1 cut(s)	638
Eco24I	GRGCYC	1 cut(s)	96
Eco47I	GGWCC	2 cut(s)	727, 1123
Eco53kI	GAGCTC	1 cut(s)	94
Eco57I	CTGAAG	3 cut(s)	563, 773, 957
Eco88I	CYCGRG	1 cut(s)	269
EcoICRI	GAGCTC	1 cut(s)	94
EcoNI	CCTNNNNNAGG	1 cut(s)	122
EcoO109I	RGGNCCY	1 cut(s)	1123
EcoRI	GAATTC	1 cut(s)	711
EcoRII	CCWGG	1 cut(s)	1465
EcoT22I	ATGCAT	3 cut(s)	783, 885, 974
EcoT38I	GRGCYC	1 cut(s)	96
Esp3I	CGTCTC	4 cut(s)	91, 284, 1569, 1733
FaeI	CATG	9 cut(s)	435, 502, 702, 976, 1075, 1163, 1295, 1449, 1489
FalI	AAGNNNNNCTT	2 cut(s)	1705, 1737
FaqI	GGGAC	2 cut(s)	1002, 1109
FatI	CATG	9 cut(s)	431, 498, 698, 972, 1071, 1159, 1291, 1445, 1485
FauI	CCCGC	2 cut(s)	1197, 1440
FbaI	TGATCA	1 cut(s)	1311
Fnu4HI	GCNGC	7 cut(s)	21, 167, 213, 1025, 1456, 1476, 1519
FokI	GGATG	6 cut(s)	772, 1190, 1197, 1264, 1378, 1502
FriOI	GRGCYC	1 cut(s)	96
Fsp4HI	GCNGC	7 cut(s)	21, 167, 213, 1025, 1456, 1476, 1519
FspBI	CTAG	2 cut(s)	377, 1007
GluI	GCNGC	7 cut(s)	21, 167, 213, 1025, 1456, 1476, 1519
GsaI	CCCAGC	1 cut(s)	76
GsuI	CTGGAG	2 cut(s)	305, 737
HaeIII	GGCC	5 cut(s)	44, 62, 191, 1455, 1518
HapII	CCGG	4 cut(s)	131, 142, 1015, 1664
HgaI	GACGC	2 cut(s)	230, 301
Hin1I	GRCGYC	1 cut(s)	293
Hin1II	CATG	9 cut(s)	435, 502, 702, 976, 1075, 1163, 1295, 1449, 1489
HincII	GTYRAC	1 cut(s)	799
HindII	GTYRAC	1 cut(s)	799
HindIII	AAGCTT	1 cut(s)	525
HinfI	GANTC	9 cut(s)	8, 29, 272, 329, 907, 1109, 1337, 1382, 1551
HpaI	GTTAAC	1 cut(s)	799
HpaII	CCGG	4 cut(s)	131, 142, 1015, 1664
HphI	GGTGA	4 cut(s)	97, 1175, 1580, 1643
Hpy166II	GTNNAC	3 cut(s)	315, 674, 799
Hpy188I	TCNGA	7 cut(s)	13, 91, 220, 582, 1336, 1365, 1696
Hpy8I	GTNNAC	3 cut(s)	315, 674, 799
Hpy99I	CGWCG	2 cut(s)	29, 224
HpyAV	CCTTC	3 cut(s)	112, 748, 932
HpyCH4III	ACNGT	8 cut(s)	389, 678, 857, 1035, 1157, 1439, 1531, 1631
HpyCH4IV	ACGT	5 cut(s)	84, 371, 637, 1617, 1635
HpyF10VI	GCNNNNNNNGC	8 cut(s)	163, 172, 209, 221, 230, 533, 818, 1455
HpyF3I	CTNAG	4 cut(s)	318, 417, 469, 1623
HpySE526I	ACGT	5 cut(s)	84, 371, 637, 1617, 1635
Hsp92I	GRCGYC	1 cut(s)	293
Hsp92II	CATG	9 cut(s)	435, 502, 702, 976, 1075, 1163, 1295, 1449, 1489
KflI	GGGWCCC	1 cut(s)	1123
Ksp22I	TGATCA	1 cut(s)	1311
KspAI	GTTAAC	1 cut(s)	799
KspI	CCGCGG	1 cut(s)	39
Kzo9I	GATC	6 cut(s)	112, 721, 944, 964, 1311, 1656
LmnI	GCTCC	5 cut(s)	99, 133, 154, 337, 1472
Lsp1109I	GCAGC	4 cut(s)	7, 199, 1011, 1462
LweI	GCATC	4 cut(s)	139, 790, 1356, 1480
MaeI	CTAG	2 cut(s)	377, 1007
MaeII	ACGT	5 cut(s)	84, 371, 637, 1617, 1635
MaeIII	GTNAC	6 cut(s)	603, 1183, 1423, 1460, 1618, 1631
MalI	GATC	6 cut(s)	114, 723, 946, 966, 1313, 1658
MboI	GATC	6 cut(s)	112, 721, 944, 964, 1311, 1656
MboII	GAAGA	8 cut(s)	243, 554, 569, 854, 854, 1052, 1685, 1748
MflI	RGATCY	3 cut(s)	721, 944, 1656
MhlI	GDGCHC	4 cut(s)	96, 317, 1079, 1276
MlsI	TGGCCA	2 cut(s)	44, 191
MluI	ACGCGT	1 cut(s)	222
MluNI	TGGCCA	2 cut(s)	44, 191
MlyI	GAGTC	5 cut(s)	17, 23, 281, 901, 1545
MmeI	TCCRAC	1 cut(s)	243
Mox20I	TGGCCA	2 cut(s)	44, 191
Mph1103I	ATGCAT	3 cut(s)	783, 885, 974
MscI	TGGCCA	2 cut(s)	44, 191
MseI	TTAA	6 cut(s)	798, 903, 912, 1233, 1286, 1481
MslI	CAYNNNNRTG	1 cut(s)	1164
Msp20I	TGGCCA	2 cut(s)	44, 191
MspA1I	CMGCKG	3 cut(s)	38, 166, 1458
MspCI	CTTAAG	1 cut(s)	902
MspI	CCGG	4 cut(s)	131, 142, 1015, 1664
MspR9I	CCNGG	3 cut(s)	143, 1016, 1467
Mva1269I	GAATGC	1 cut(s)	783
MvaI	CCWGG	1 cut(s)	1467
MvnI	CGCG	2 cut(s)	38, 224
MwoI	GCNNNNNNNGC	8 cut(s)	163, 172, 209, 221, 230, 533, 818, 1455
NciI	CCSGG	2 cut(s)	143, 1016
NdeII	GATC	6 cut(s)	112, 721, 944, 964, 1311, 1656
NheI	GCTAGC	1 cut(s)	376
NlaIII	CATG	9 cut(s)	435, 502, 702, 976, 1075, 1163, 1295, 1449, 1489
NlaIV	GGNNCC	3 cut(s)	129, 1124, 1125
NmuCI	GTSAC	1 cut(s)	1631
NsiI	ATGCAT	3 cut(s)	783, 885, 974
NspI	RCATGY	4 cut(s)	435, 976, 1295, 1449
NspV	TTCGAA	1 cut(s)	238
PaeR7I	CTCGAG	1 cut(s)	269
PciI	ACATGT	1 cut(s)	431
PctI	GAATGC	1 cut(s)	783
PfeI	GAWTC	4 cut(s)	329, 1109, 1337, 1382
PflMI	CCANNNNNTGG	1 cut(s)	1139
PkrI	GCNGC	7 cut(s)	22, 168, 214, 1026, 1457, 1477, 1520
Ple19I	CGATCG	1 cut(s)	115
PleI	GAGTC	5 cut(s)	16, 23, 280, 901, 1545
PpsI	GAGTC	5 cut(s)	16, 23, 280, 901, 1545
Ppu21I	YACGTR	1 cut(s)	638
PpuMI	RGGWCCY	1 cut(s)	1123
PscI	ACATGT	1 cut(s)	431
PshAI	GACNNNNGTC	1 cut(s)	858
Psp124BI	GAGCTC	1 cut(s)	96
Psp5II	RGGWCCY	1 cut(s)	1123
Psp6I	CCWGG	1 cut(s)	1465
PspFI	CCCAGC	1 cut(s)	72
PspGI	CCWGG	1 cut(s)	1465
PspN4I	GGNNCC	3 cut(s)	129, 1124, 1125
PspPI	GGNCC	2 cut(s)	727, 1123
PspPPI	RGGWCCY	1 cut(s)	1123
PstI	CTGCAG	2 cut(s)	538, 1249
PsuI	RGATCY	3 cut(s)	721, 944, 1656
PvuI	CGATCG	1 cut(s)	115
RsaI	GTAC	4 cut(s)	282, 391, 749, 1352
RsaNI	GTAC	4 cut(s)	281, 390, 748, 1351
RseI	CAYNNNNRTG	1 cut(s)	1164
SacI	GAGCTC	1 cut(s)	96
SacII	CCGCGG	1 cut(s)	39
SaqAI	TTAA	6 cut(s)	798, 903, 912, 1233, 1286, 1481
SatI	GCNGC	7 cut(s)	21, 167, 213, 1025, 1456, 1476, 1519
Sau3AI	GATC	6 cut(s)	112, 721, 944, 964, 1311, 1656
Sau96I	GGNCC	2 cut(s)	727, 1123
SchI	GAGTC	5 cut(s)	17, 23, 281, 901, 1545
ScrFI	CCNGG	3 cut(s)	143, 1016, 1467
SduI	GDGCHC	4 cut(s)	96, 317, 1079, 1276
SfaNI	GCATC	4 cut(s)	139, 790, 1356, 1480
SfcI	CTRYAG	2 cut(s)	534, 1245
Sfr274I	CTCGAG	1 cut(s)	269
Sfr303I	CCGCGG	1 cut(s)	39
SfuI	TTCGAA	1 cut(s)	238
SgrBI	CCGCGG	1 cut(s)	39
SinI	GGWCC	2 cut(s)	727, 1123
SlaI	CTCGAG	1 cut(s)	269
SmiMI	CAYNNNNRTG	1 cut(s)	1164
SmlI	CTYRAG	3 cut(s)	269, 902, 1302
SmoI	CTYRAG	3 cut(s)	269, 902, 1302
SnaBI	TACGTA	1 cut(s)	638
SspI	AATATT	2 cut(s)	598, 816
SspMI	CTAG	2 cut(s)	377, 1007
SstI	GAGCTC	1 cut(s)	96
StyD4I	CCNGG	3 cut(s)	141, 1014, 1465
TaaI	ACNGT	8 cut(s)	389, 678, 857, 1035, 1157, 1439, 1531, 1631
TaiI	ACGT	5 cut(s)	87, 374, 640, 1620, 1638
TaqI	TCGA	7 cut(s)	111, 147, 238, 270, 399, 1151, 1408
TatI	WGTACW	1 cut(s)	389
TauI	GCSGC	3 cut(s)	169, 1458, 1521
TfiI	GAWTC	4 cut(s)	329, 1109, 1337, 1382
Tru1I	TTAA	6 cut(s)	798, 903, 912, 1233, 1286, 1481
Tru9I	TTAA	6 cut(s)	798, 903, 912, 1233, 1286, 1481
TscAI	CASTG	4 cut(s)	322, 844, 1038, 1442
TseFI	GTSAC	1 cut(s)	1631
TseI	GCWGC	4 cut(s)	20, 212, 1024, 1475
Tsp45I	GTSAC	1 cut(s)	1631
TspDTI	ATGAA	9 cut(s)	196, 320, 471, 678, 1137, 1182, 1268, 1617, 1623
TspGWI	ACGGA	2 cut(s)	608, 1593
TspRI	CASTG	4 cut(s)	322, 844, 1038, 1442
Van91I	CCANNNNNTGG	1 cut(s)	1139
Vha464I	CTTAAG	1 cut(s)	902
VneI	GTGCAC	1 cut(s)	313
VpaK11BI	GGWCC	2 cut(s)	727, 1123
XagI	CCTNNNNNAGG	1 cut(s)	122
XapI	RAATTY	3 cut(s)	711, 915, 1090
XceI	RCATGY	4 cut(s)	435, 976, 1295, 1449
XhoI	CTCGAG	1 cut(s)	269
XspI	CTAG	2 cut(s)	377, 1007
Zsp2I	ATGCAT	3 cut(s)	783, 885, 974

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.