RLG00000010422

Conserved oligomeric Golgi complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0007656
Physical Location & Seq
Forward (+)
1495073 .. 1502440
7368 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010422

Sequence Viewer

Length: 3462 bp
ATGATGGAGTCCGAAAATGCCGCCGAGGACTCCTCGTCCGCCGTGGCCAGCCTCATCCCTCTGGCCTCTGGCGCTCAGCAGCCTTACGTCTCCGAGCTCCTCTCCTTCACCCTCGATCGCCTCCACAAGGAACCGGAGCTTCTGCGGGTCGATGCGGAGCGGATACAGCGGCAAATGCAAGAGGTGGCGGTGGGGAATTACCGAGCGTTCATCGCCGCTTCGGACGCGTTGCTGGTGATTCGAGACGAAGTGTCCTCCATTGACAAGCATCTTGAATCTCTGATAGGGGAGATCCCAAAGTTGACGAGTGGATGCACTGAGTTTGTTGAATCGGCGGAAGAGATTTTGGAGAAGAGGAAGATGAACCAGACATTGCTAGCGAATCACAGTACATTGCTCGACTTACTTGAAATTCCGCAGCTTATGGATACATGTGTGAGGAATGGAAATTATGATGAAGCTCTTGACTTAGAGACGTTTGTTTGCAAGCTTTCAACCATGCACCCGAAGTTGCCCGTTATACAAGCTCTGGCTGCAGAAGTCAGGCTGACCACCCAATCTCTTCTTTCTCAGCTTCTTCAGAAACTTCGCTCAAATATTCAGTTACCTGAGTGTCTCCGCATTATTGGATATCTACGTAGAATAGGGGTATTTAGTGAGTATGAAATGCGTCTGCAGTTCTTGAGATGTCGGCAAGCATGGCTTACTGGAATTCTTGAGGATCTGGACAAGAGGAACGCTTATGAGTACCTGAAGGGGATGATTAACTTCCAAAGACAGCATCTATTTGATGTTGTCAATCAATACAGAGCAATATTTTCTGATGATACATCAGGCAATGAAGAAAATCATGATGGCGGTCTTCTGTTCAGTTGGTCTATGCATCAAATTACCTCACTCCTTAAGACTCTGAAGATTATGCTTCCAAAAATAACTGAAGGCGGATCACTGTCAAACATTTTGGATCAATCCATGTATTGTGCTATGGGGCTTGGTTGGGTTGGGCTAGATTTCCGGGGACTGCTACCATCACTTTTTGAAGAGGCAGTTCTCAACTTGTTCGCAAAAAATATGAGTACAGCAGTTGAAAATTTTCAGTTGGTCTTGGATTCACATCGTTGGGTCCCACTACCAGCAGTTGGTTTTCCAGCAAATAGTGTTAATGATGAAAGTCTGGATGATGTAACTCCGCCATCTTATCTTATGGAACATCCACCTCTTGCTGTTTTTGTTAATGGTGTCTCTGCAGCGATGAATGACCTCCGGCCCTGTGCCCCCATAAGTTTGAAGCACTTGCTTGCTCAAGAGTTAATCAAGGGATTACAGACTGTTGCTGACTCTTTACTGAGGTACAATACAACTAGAATACTGAGAGATAACGAGTCTGGACTTTTTCTCTCACTTTGCCGGGCTTTCATTGAGATTACTTACCCTCATTGTGCAAATTGCTTTGGCCGCTGCTACCCTGGTGGAGCTGCTTTAGTAATGGATGCAACGAGTTTATACGATGGGATTGGCCGCCTATTGACAGTCTCTACATCCAGAGGGCTTCCCAAACCTGTTGGTGAGGAAAACAAAGATAAGCCTGTTGGTGATGAGAACAAAGATGAAGGTGAAAAGGGCATAACTGAGAATGGTGACATGCCCGTGGTTGAAAACGGGGTCACACCTGTTGTTGAACAAACTAATGAGACCAGTGCAGACGAAAGGGAACAGAATATCTCTCAGCTTGTCTGCTGCACCTTCAATTTCAAGAGCAGAGCCTGGGAGTCTATGGCTTCCAGTATGGAAGAAGCTTCAGGAGGACAACAAGAACAACCTACCCCAAGATTACAGATTTACACCACCTCTGATACTGTCTCTCCCTTCTGGAGAGAGAAGTATGAAAGAGAGGCTAAGAAGTACTGGGATGTCTTTTATAAGCGACATCAAGATAGGTTTTTTAAAGATCGGCACTACTTGGACAAGGAATGGGGCCAATACTTTTCTGAAGCTGGGCAGAAAGTTGTTTTAGAGGTTGGCTGTGGAGCTGGAAACACTATTTTTCCACTTGTTGCGATATATGCAGACATTTTTGTCCATGCTTGTGATTTTTCACCAAATGCTGTTAACTTGGTTAAGAAACATAAAGATTTTACTGAGTCCAGAGTTAATGCGTTCGTTTGTGATTTGACCATTGACGATCTGAGCAAGCAGATATCTCCATCTTCAGTAGATATTGTAACCATGATTTTTGTGTTATCTGCAGTATCTCCAGAGAAGATGTCTCTGGTAGTGCAGAATATTAGAAAGATTCTCAAGCCAAATGGTAGTGTGCTATTTCGCGATTATGCTACTGGTGACCTTGCTCAGGAAAGATTAAATTGCAAGGACCAAAAGATTAGTGAAAACTTTTATGCCAGGGGTGATGGCACTAGGGCTTTCTACTTCTCTAATGAGTTCTTGACAAGTTTATTTAAAGAAAATGGTTTTGATGTTGAGGAACTTGATCTGTGCTGCAAACAAGTTGAGAACCGATCGCGGGAGTTGGTGATGAATAGGCGGTGGGTTCAAGCTGTATTCTGCCTTTCGGATGGTACAAGCTCCACCACCAACTCAGAAGCTGCAATCAGAATAGACCTTCCTGGTCAGGGGAAAATGGAGCTGGATTTTGACAATAACATCTTGAAGGAACCTGTAAATGATTTGGAGGTTGACATGTCCGACGGTGTGGCAACAGAAATGTTTGGTCTTCCAACTTCGACTGATGGTGATAATGAGGTCATTGAGCTCGAGCTGGGAGGTTGGACTTTCAAAATCAGAGTGCTATCCAAAGAGTACCAACACACCTGCAAATCAACTGGTTTAATGTTATGGGAATCAGCTCGGTTTATGGCTCCTGTTTTAGCAAGAAATCCAGCTATTTTTGCTGGGAAACGGGTGTTGGAGTTGGGGTCTGGCTGTGCAGGCATTTGCTCTATGATTGCTGCTGGATCTGCAGACCTTGTGTTTGCCACTGATGGTGACACAAAAGCACTCGACCTACTGACAGAAAATGTCATGTCAAATCTTAGACCGCCAATTTCGGACAAATTTACTACAAGAATATTAGAGTGGGGAAATGAAGACCATATAGAAGCCATCAAGCAAGTTAACAGTGGAGGATTTGATATCATATTAGGCACAGATGTCACTTACATACCTGAAGCTATTTTGCCCTTGTTTCAAACTGCAAAGGAGTTGATTTCATCTAATAACAAGGATCACCAAGCAGCCCTAATCCTGTGTCATATTTTTCGTCGAGTAGATGAACCTTCCATACTTTCAGCAGCTTCTCGATTTGGTTTCAAGCTAGTCGATAAGTGGCCTGTAGAAATTCTTATTAATCCATCACAAAGCATCATCAATTCTTGGTTCTCTGAAAACGGCTCAGCGGATGTTTCAAGGGGGCCGTTAAATATTTTGTACTTCCACAGGGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Dor1

Protein Analysis

1154

Amino Acids

129.06

Weight (kDa)

4.96

Isoelectric Point (pI)

46.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS51_Exo84_N PF08700 26 - 103 2e-11 Vps51/EXO84/COG1 N-terminal
Dor1 PF04124 30 - 363 1.5e-129 Dor1-like family
Methyltransf_23 PF13489 654 - 828 1.3e-12 Methyltransferase domain
Methyltransf_31 PF13847 668 - 786 2.8e-10 Methyltransferase domain
Methyltransf_25 PF13649 670 - 770 1.5e-12 Methyltransferase domain
Methyltransf_12 PF08242 671 - 771 1.3e-15 Methyltransferase domain
Methyltransf_11 PF08241 671 - 774 6.4e-10 Methyltransferase domain
Methyltransf_16 PF10294 941 - 1096 1.4e-14 Lysine methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1920
AarI CACCTGC 1 cut(s) 2837
AasI GACNNNNNNGTC 1 cut(s) 2075
Acc36I ACCTGC 1 cut(s) 2837
AccB7I CCANNNNNTGG 1 cut(s) 1139
AccBSI CCGCTC 1 cut(s) 160
AccII CGCG 3 cut(s) 227, 2325, 2521
AclWI GGATC 6 cut(s) 286, 729, 952, 972, 2980, 3249
AcoI YGGCCR 3 cut(s) 45, 1453, 1516
AcsI RAATTY 5 cut(s) 411, 711, 1090, 3071, 3354
AcuI CTGAAG 8 cut(s) 563, 773, 932, 957, 1782, 2010, 2193, 3204
AfaI GTAC 8 cut(s) 391, 749, 1078, 1352, 1904, 2578, 2819, 3446
AfiI CCNNNNNNNGG 5 cut(s) 127, 1139, 2350, 2521, 2630
AflII CTTAAG 1 cut(s) 902
AflIII ACRYGT 3 cut(s) 225, 431, 2697
AhdI GACNNNNNGTC 2 cut(s) 34, 250
AjnI CCWGG 4 cut(s) 1465, 1763, 2399, 2623
AjuI GAANNNNNNNTTGG 2 cut(s) 2906, 2938
Alw21I GWGCWC 2 cut(s) 99, 2772
Alw26I GTCTC 9 cut(s) 94, 237, 467, 620, 1246, 1537, 1685, 1864, 2271
AlwI GGATC 6 cut(s) 286, 729, 952, 972, 2980, 3249
AlwNI CAGNNNCTG 2 cut(s) 1764, 2603
Ama87I CYCGRG 1 cut(s) 2771
AoxI GGCC 8 cut(s) 45, 63, 1265, 1453, 1516, 1975, 3344, 3428
ApoI RAATTY 5 cut(s) 411, 711, 1090, 3071, 3354
ArsI GACNNNNNNTTYG 2 cut(s) 2972, 3004
AseI ATTAAT 1 cut(s) 3363
Asp700I GAANNNNTTC 1 cut(s) 1092
AspLEI GCGC 1 cut(s) 74
AspS9I GGNCC 5 cut(s) 1123, 1266, 1975, 2371, 3428
AsuC2I CCSGG 2 cut(s) 1016, 1409
AsuNHI GCTAGC 1 cut(s) 376
AvaI CYCGRG 1 cut(s) 2771
AvaII GGWCC 2 cut(s) 1123, 2371
BaeGI GKGCMC 1 cut(s) 1276
BaeI ACNNNNGTAYC 2 cut(s) 420, 453
BalI TGGCCA 1 cut(s) 47
BanII GRGCYC 2 cut(s) 99, 2772
BbsI GAAGAC 3 cut(s) 854, 2723, 3111
Bbv12I GWGCWC 2 cut(s) 99, 2772
BceAI ACGGC 3 cut(s) 26, 3415, 3421
BciT130I CCWGG 4 cut(s) 1467, 1765, 2401, 2625
BciVI GTATCC 2 cut(s) 156, 421
BcnI CCSGG 2 cut(s) 1016, 1409
BcoDI GTCTC 9 cut(s) 94, 237, 467, 620, 1246, 1537, 1685, 1864, 2271
BfaI CTAG 5 cut(s) 377, 1007, 1362, 2415, 3332
BfmI CTRYAG 6 cut(s) 534, 674, 1245, 2244, 2976, 3348
BfoI RGCGCY 1 cut(s) 75
BfrI CTTAAG 1 cut(s) 902
BfuAI ACCTGC 1 cut(s) 2837
BfuI GTATCC 2 cut(s) 156, 421
BlpI GCTNAGC 2 cut(s) 75, 3409
BmcAI AGTACT 1 cut(s) 1904
Bme1390I CCNGG 6 cut(s) 1016, 1409, 1467, 1765, 2401, 2625
Bme18I GGWCC 2 cut(s) 1123, 2371
BmeRI GACNNNNNGTC 2 cut(s) 34, 250
BmeT110I CYCGRG 1 cut(s) 2771
BmgT120I GGNCC 5 cut(s) 1123, 1266, 1975, 2371, 3428
BmiI GGNNCC 7 cut(s) 132, 1124, 1125, 1976, 2673, 2877, 3429
BmrFI CCNGG 6 cut(s) 1016, 1409, 1467, 1765, 2401, 2625
BmrI ACTGGG 1 cut(s) 1915
BmsI GCATC 7 cut(s) 142, 277, 302, 790, 892, 1480, 3387
BmtI GCTAGC 1 cut(s) 380
BmuI ACTGGG 1 cut(s) 1915
BpiI GAAGAC 3 cut(s) 854, 2723, 3111
BplI GAGNNNNNCTC 4 cut(s) 17, 49, 86, 118
BpmI CTGGAG 2 cut(s) 1891, 2238
Bpu10I CCTNAGC 1 cut(s) 2349
Bpu1102I GCTNAGC 2 cut(s) 75, 3409
BpuEI CTTGAG 4 cut(s) 703, 737, 1287, 2282
BpuMI CCSGG 2 cut(s) 1016, 1409
BsaAI YACGTR 1 cut(s) 638
BsaBI GATNNNNATC 1 cut(s) 1113
BsaI GGTCTC 1 cut(s) 1685
BsaJI CCNNGG 7 cut(s) 24, 42, 1015, 1465, 1647, 1764, 2400
BsaWI WCCGGW 1 cut(s) 133
BsaXI ACNNNNNCTCC 4 cut(s) 1846, 1876, 2918, 2948
Bsc4I CCNNNNNNNGG 5 cut(s) 127, 1139, 2350, 2521, 2630
Bse1I ACTGG 6 cut(s) 712, 1695, 1782, 1910, 2341, 2845
Bse3DI GCAATG 3 cut(s) 371, 392, 844
Bse8I GATNNNNATC 1 cut(s) 1113
BseBI CCWGG 4 cut(s) 1467, 1765, 2401, 2625
BseDI CCNNGG 7 cut(s) 24, 42, 1015, 1465, 1647, 1764, 2400
BseJI GATNNNNATC 1 cut(s) 1113
BseLI CCNNNNNNNGG 5 cut(s) 127, 1139, 2350, 2521, 2630
BseMI GCAATG 3 cut(s) 371, 392, 844
BseNI ACTGG 6 cut(s) 712, 1695, 1782, 1910, 2341, 2845
BseRI GAGGAG 2 cut(s) 22, 89
BseSI GKGCMC 1 cut(s) 1276
BseYI CCCAGC 3 cut(s) 1994, 2776, 2909
BsgI GTGCAG 4 cut(s) 1719, 1723, 2297, 2964
Bsh1236I CGCG 3 cut(s) 227, 2325, 2521
Bsh1285I CGRYCG 2 cut(s) 118, 2519
BshFI GGCC 8 cut(s) 47, 65, 1267, 1455, 1518, 1977, 3346, 3430
BsiEI CGRYCG 2 cut(s) 118, 2519
BsiHKAI GWGCWC 2 cut(s) 99, 2772
BsiHKCI CYCGRG 1 cut(s) 2771
BsiSI CCGG 4 cut(s) 134, 1015, 1264, 1408
BslFI GGGAC 2 cut(s) 1032, 1109
BslI CCNNNNNNNGG 5 cut(s) 127, 1139, 2350, 2521, 2630
BsmAI GTCTC 9 cut(s) 94, 237, 467, 620, 1246, 1537, 1685, 1864, 2271
BsmBI CGTCTC 3 cut(s) 94, 237, 467
BsmFI GGGAC 2 cut(s) 1032, 1109
BsnI GGCC 8 cut(s) 47, 65, 1267, 1455, 1518, 1977, 3346, 3430
Bso31I GGTCTC 1 cut(s) 1685
BsoBI CYCGRG 1 cut(s) 2771
Bsp1286I GDGCHC 3 cut(s) 99, 1276, 2772
Bsp1720I GCTNAGC 2 cut(s) 75, 3409
Bsp68I TCGCGA 1 cut(s) 2325
BspANI GGCC 8 cut(s) 47, 65, 1267, 1455, 1518, 1977, 3346, 3430
BspFNI CGCG 3 cut(s) 227, 2325, 2521
BspHI TCATGA 1 cut(s) 850
BspLI GGNNCC 7 cut(s) 132, 1124, 1125, 1976, 2673, 2877, 3429
BspMAI CTGCAG 5 cut(s) 538, 678, 1249, 2248, 2980
BspMI ACCTGC 1 cut(s) 2837
BspOI GCTAGC 1 cut(s) 380
BspPI GGATC 6 cut(s) 286, 729, 952, 972, 2980, 3249
BspTI CTTAAG 1 cut(s) 902
BspTNI GGTCTC 1 cut(s) 1685
BsrBI CCGCTC 1 cut(s) 160
BsrDI GCAATG 3 cut(s) 371, 392, 844
BsrI ACTGG 6 cut(s) 712, 1695, 1782, 1910, 2341, 2845
BssECI CCNNGG 7 cut(s) 24, 42, 1015, 1465, 1647, 1764, 2400
Bst2UI CCWGG 4 cut(s) 1467, 1765, 2401, 2625
Bst4CI ACNGT 7 cut(s) 389, 951, 1330, 1531, 1858, 2708, 3137
Bst6I CTCTTC 4 cut(s) 333, 347, 567, 1035
BstAFI CTTAAG 1 cut(s) 902
BstBAI YACGTR 1 cut(s) 638
BstC8I GCNNGC 7 cut(s) 49, 378, 488, 696, 1299, 2192, 2947
BstDSI CCRYGG 2 cut(s) 42, 1647
BstEII GGTNACC 1 cut(s) 2339
BstENI CCTNNNNNAGG 2 cut(s) 125, 2348
BstFNI CGCG 3 cut(s) 227, 2325, 2521
BstH2I RGCGCY 1 cut(s) 75
BstHHI GCGC 1 cut(s) 74
BstMAI GTCTC 9 cut(s) 94, 237, 467, 620, 1246, 1537, 1685, 1864, 2271
BstMCI CGRYCG 2 cut(s) 118, 2519
BstNI CCWGG 4 cut(s) 1467, 1765, 2401, 2625
BstNSI RCATGY 3 cut(s) 435, 1645, 2701
BstPI GGTNACC 1 cut(s) 2339
BstSCI CCNGG 6 cut(s) 1014, 1407, 1465, 1763, 2399, 2623
BstSFI CTRYAG 6 cut(s) 534, 674, 1245, 2244, 2976, 3348
BstSLI GKGCMC 1 cut(s) 1276
BstSNI TACGTA 1 cut(s) 638
BstUI CGCG 3 cut(s) 227, 2325, 2521
BstV2I GAAGAC 3 cut(s) 854, 2723, 3111
BstX2I RGATCY 3 cut(s) 291, 721, 2972
BstYI RGATCY 3 cut(s) 291, 721, 2972
BsuI GTATCC 2 cut(s) 156, 421
BsuRI GGCC 8 cut(s) 47, 65, 1267, 1455, 1518, 1977, 3346, 3430
BtgI CCRYGG 2 cut(s) 42, 1647
BtgZI GCGATG 2 cut(s) 196, 1265
BtsIMutI CAGTG 5 cut(s) 315, 947, 1702, 2994, 3142
BtuMI TCGCGA 1 cut(s) 2325
BveI ACCTGC 1 cut(s) 2837
Cac8I GCNNGC 7 cut(s) 49, 378, 488, 696, 1299, 2192, 2947
CaiI CAGNNNCTG 2 cut(s) 1764, 2603
CciI TCATGA 1 cut(s) 850
CfoI GCGC 1 cut(s) 74
Cfr13I GGNCC 5 cut(s) 1123, 1266, 1975, 2371, 3428
CseI GACGC 2 cut(s) 233, 659
Csp6I GTAC 8 cut(s) 390, 748, 1077, 1351, 1903, 2577, 2818, 3445
CviQI GTAC 8 cut(s) 390, 748, 1077, 1351, 1903, 2577, 2818, 3445
DraI TTTAAA 2 cut(s) 1945, 2458
DrdI GACNNNNNNGTC 1 cut(s) 2075
DriI GACNNNNNGTC 2 cut(s) 34, 250
DseDI GACNNNNNNGTC 1 cut(s) 2075
EaeI YGGCCR 3 cut(s) 45, 1453, 1516
Eam1104I CTCTTC 4 cut(s) 333, 347, 567, 1035
Eam1105I GACNNNNNGTC 2 cut(s) 34, 250
EarI CTCTTC 4 cut(s) 333, 347, 567, 1035
EciI GGCGGA 4 cut(s) 28, 350, 957, 1179
Ecl136II GAGCTC 2 cut(s) 97, 2770
Eco105I TACGTA 1 cut(s) 638
Eco24I GRGCYC 2 cut(s) 99, 2772
Eco31I GGTCTC 1 cut(s) 1685
Eco32I GATATC 3 cut(s) 632, 2199, 3151
Eco47I GGWCC 2 cut(s) 1123, 2371
Eco53kI GAGCTC 2 cut(s) 97, 2770
Eco57I CTGAAG 8 cut(s) 563, 773, 932, 957, 1782, 2010, 2193, 3204
Eco88I CYCGRG 1 cut(s) 2771
Eco91I GGTNACC 1 cut(s) 2339
EcoICRI GAGCTC 2 cut(s) 97, 2770
EcoNI CCTNNNNNAGG 2 cut(s) 125, 2348
EcoO109I RGGNCCY 1 cut(s) 1123
EcoO65I GGTNACC 1 cut(s) 2339
EcoRI GAATTC 1 cut(s) 711
EcoRII CCWGG 4 cut(s) 1465, 1763, 2399, 2623
EcoRV GATATC 3 cut(s) 632, 2199, 3151
EcoT22I ATGCAT 1 cut(s) 885
EcoT38I GRGCYC 2 cut(s) 99, 2772
Esp3I CGTCTC 3 cut(s) 94, 237, 467
FalI AAGNNNNNCTT 2 cut(s) 687, 719
FaqI GGGAC 2 cut(s) 1032, 1109
FauI CCCGC 2 cut(s) 138, 2514
FriOI GRGCYC 2 cut(s) 99, 2772
FspBI CTAG 5 cut(s) 377, 1007, 1362, 2415, 3332
GlaI GCGC 1 cut(s) 73
GsaI CCCAGC 3 cut(s) 1998, 2780, 2913
GsuI CTGGAG 2 cut(s) 1891, 2238
HaeII RGCGCY 1 cut(s) 75
HaeIII GGCC 8 cut(s) 47, 65, 1267, 1455, 1518, 1977, 3346, 3430
HapII CCGG 4 cut(s) 134, 1015, 1264, 1408
HgaI GACGC 2 cut(s) 233, 659
HhaI GCGC 1 cut(s) 74
Hin6I GCGC 1 cut(s) 72
HinP1I GCGC 1 cut(s) 72
HincII GTYRAC 4 cut(s) 303, 2110, 2695, 3133
HindII GTYRAC 4 cut(s) 303, 2110, 2695, 3133
HindIII AAGCTT 2 cut(s) 488, 1794
HpaI GTTAAC 2 cut(s) 2110, 3133
HpaII CCGG 4 cut(s) 134, 1015, 1264, 1408
Hpy166II GTNNAC 4 cut(s) 303, 2110, 2695, 3133
Hpy8I GTNNAC 4 cut(s) 303, 2110, 2695, 3133
Hpy99I CGWCG 2 cut(s) 2708, 3282
HpyAV CCTTC 9 cut(s) 115, 748, 932, 1604, 1753, 1876, 2630, 2662, 3303
HpyCH4III ACNGT 7 cut(s) 389, 951, 1330, 1531, 1858, 2708, 3137
HpyCH4IV ACGT 3 cut(s) 87, 476, 637
HpySE526I ACGT 3 cut(s) 87, 476, 637
HspAI GCGC 1 cut(s) 72
KflI GGGWCCC 1 cut(s) 1123
KspAI GTTAAC 2 cut(s) 2110, 3133
LmnI GCTCC 8 cut(s) 102, 136, 157, 1472, 2027, 2588, 2641, 2881
LweI GCATC 7 cut(s) 142, 277, 302, 790, 892, 1480, 3387
MaeI CTAG 5 cut(s) 377, 1007, 1362, 2415, 3332
MaeII ACGT 3 cut(s) 87, 476, 637
MaeIII GTNAC 8 cut(s) 603, 1183, 1637, 1663, 2221, 2339, 3002, 3169
MbiI CCGCTC 1 cut(s) 160
MflI RGATCY 3 cut(s) 291, 721, 2972
MhlI GDGCHC 3 cut(s) 99, 1276, 2772
MlsI TGGCCA 1 cut(s) 47
MluI ACGCGT 1 cut(s) 225
MluNI TGGCCA 1 cut(s) 47
MlyI GAGTC 7 cut(s) 17, 23, 901, 1331, 1391, 1778, 2150
MmeI TCCRAC 4 cut(s) 2727, 2759, 2765, 2904
Mox20I TGGCCA 1 cut(s) 47
Mph1103I ATGCAT 1 cut(s) 885
MroXI GAANNNNTTC 1 cut(s) 1092
MscI TGGCCA 1 cut(s) 47
MslI CAYNNNNRTG 2 cut(s) 1646, 2085
Msp20I TGGCCA 1 cut(s) 47
MspA1I CMGCKG 3 cut(s) 169, 1458, 3413
MspCI CTTAAG 1 cut(s) 902
MspI CCGG 4 cut(s) 134, 1015, 1264, 1408
MspR9I CCNGG 6 cut(s) 1016, 1409, 1467, 1765, 2401, 2625
MvaI CCWGG 4 cut(s) 1467, 1765, 2401, 2625
MvnI CGCG 3 cut(s) 227, 2325, 2521
NciI CCSGG 2 cut(s) 1016, 1409
NheI GCTAGC 1 cut(s) 376
NlaIV GGNNCC 7 cut(s) 132, 1124, 1125, 1976, 2673, 2877, 3429
NmeAIII GCCGAG 1 cut(s) 49
NmuCI GTSAC 5 cut(s) 1637, 1663, 2339, 3002, 3169
NruI TCGCGA 1 cut(s) 2325
NsiI ATGCAT 1 cut(s) 885
NspI RCATGY 3 cut(s) 435, 1645, 2701
PaeR7I CTCGAG 1 cut(s) 2771
PagI TCATGA 1 cut(s) 850
PaqCI CACCTGC 1 cut(s) 2837
PciI ACATGT 2 cut(s) 431, 2697
PdmI GAANNNNTTC 1 cut(s) 1092
PfeI GAWTC 7 cut(s) 238, 275, 329, 382, 1109, 2293, 2858
PflMI CCANNNNNTGG 1 cut(s) 1139
Ple19I CGATCG 2 cut(s) 118, 2519
PleI GAGTC 7 cut(s) 16, 23, 901, 1331, 1390, 1777, 2149
PpsI GAGTC 7 cut(s) 16, 23, 901, 1331, 1390, 1777, 2149
Ppu21I YACGTR 1 cut(s) 638
PpuMI RGGWCCY 1 cut(s) 1123
PscI ACATGT 2 cut(s) 431, 2697
PshBI ATTAAT 1 cut(s) 3363
PsiI TTATAA 1 cut(s) 1920
Psp124BI GAGCTC 2 cut(s) 99, 2772
Psp5II RGGWCCY 1 cut(s) 1123
Psp6I CCWGG 4 cut(s) 1465, 1763, 2399, 2623
PspEI GGTNACC 1 cut(s) 2339
PspFI CCCAGC 3 cut(s) 1994, 2776, 2909
PspGI CCWGG 4 cut(s) 1465, 1763, 2399, 2623
PspN4I GGNNCC 7 cut(s) 132, 1124, 1125, 1976, 2673, 2877, 3429
PspPI GGNCC 5 cut(s) 1123, 1266, 1975, 2371, 3428
PspPPI RGGWCCY 1 cut(s) 1123
PspXI VCTCGAGB 1 cut(s) 2771
PsrI GAACNNNNNNTAC 2 cut(s) 3282, 3314
PstI CTGCAG 5 cut(s) 538, 678, 1249, 2248, 2980
PstNI CAGNNNCTG 2 cut(s) 1764, 2603
PsuI RGATCY 3 cut(s) 291, 721, 2972
PvuI CGATCG 2 cut(s) 118, 2519
RruI TCGCGA 1 cut(s) 2325
RsaI GTAC 8 cut(s) 391, 749, 1078, 1352, 1904, 2578, 2819, 3446
RsaNI GTAC 8 cut(s) 390, 748, 1077, 1351, 1903, 2577, 2818, 3445
RseI CAYNNNNRTG 2 cut(s) 1646, 2085
SacI GAGCTC 2 cut(s) 99, 2772
Sau96I GGNCC 5 cut(s) 1123, 1266, 1975, 2371, 3428
ScaI AGTACT 1 cut(s) 1904
SchI GAGTC 7 cut(s) 17, 23, 901, 1331, 1391, 1778, 2150
ScrFI CCNGG 6 cut(s) 1016, 1409, 1467, 1765, 2401, 2625
SduI GDGCHC 3 cut(s) 99, 1276, 2772
SfaNI GCATC 7 cut(s) 142, 277, 302, 790, 892, 1480, 3387
SfcI CTRYAG 6 cut(s) 534, 674, 1245, 2244, 2976, 3348
Sfr274I CTCGAG 1 cut(s) 2771
SinI GGWCC 2 cut(s) 1123, 2371
SlaI CTCGAG 1 cut(s) 2771
SmiMI CAYNNNNRTG 2 cut(s) 1646, 2085
SmlI CTYRAG 6 cut(s) 682, 716, 902, 1302, 2297, 2771
SmoI CTYRAG 6 cut(s) 682, 716, 902, 1302, 2297, 2771
SnaBI TACGTA 1 cut(s) 638
SspI AATATT 5 cut(s) 598, 816, 2284, 3087, 3439
SspMI CTAG 5 cut(s) 377, 1007, 1362, 2415, 3332
SstI GAGCTC 2 cut(s) 99, 2772
StyD4I CCNGG 6 cut(s) 1014, 1407, 1465, 1763, 2399, 2623
TaaI ACNGT 7 cut(s) 389, 951, 1330, 1531, 1858, 2708, 3137
TaiI ACGT 3 cut(s) 90, 479, 640
TatI WGTACW 4 cut(s) 389, 1076, 1902, 3444
TauI GCSGC 5 cut(s) 23, 172, 218, 1458, 1521
TfiI GAWTC 7 cut(s) 238, 275, 329, 382, 1109, 2293, 2858
TscAI CASTG 5 cut(s) 322, 954, 1702, 3001, 3142
TseFI GTSAC 5 cut(s) 1637, 1663, 2339, 3002, 3169
Tsp45I GTSAC 5 cut(s) 1637, 1663, 2339, 3002, 3169
TspRI CASTG 5 cut(s) 322, 954, 1702, 3001, 3142
Van91I CCANNNNNTGG 1 cut(s) 1139
Vha464I CTTAAG 1 cut(s) 902
VpaK11BI GGWCC 2 cut(s) 1123, 2371
VspI ATTAAT 1 cut(s) 3363
XagI CCTNNNNNAGG 2 cut(s) 125, 2348
XapI RAATTY 5 cut(s) 411, 711, 1090, 3071, 3354
XceI RCATGY 3 cut(s) 435, 1645, 2701
XhoI CTCGAG 1 cut(s) 2771
XmnI GAANNNNTTC 1 cut(s) 1092
XspI CTAG 5 cut(s) 377, 1007, 1362, 2415, 3332
ZrmI AGTACT 1 cut(s) 1904
Zsp2I ATGCAT 1 cut(s) 885
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.