Conserved oligomeric Golgi complex subunit
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G11980 AT5G11980 |
| fragaria_vesca | FvH4_2g31510 FvH4_2g31510 FvH4_2g31510 |
| malus_domestica | MD08G1065800.v1.1 MD15G1055600.v1.1 |
| prunus_persica | Prupe.1G408800_v2.0.a1 |
| pyrus_communis | pycom08g05440 pycom15g05250 pycom15g05260 |
| rosa_chinensis | RchiOBHm_Chr6g0311281 |
| rosa_laevigata | RLG00000010422 |
| rosa_multiflora | Rmu_sc0008536.1_g000003 Rmu_sc0013795.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00157800 |
| rosa_rugosa | Rorug02G0372000 Rorug06G0387000 |
| rosa_samantha | Rh6AG501700 Rh6BG512400 Rh6CG518100 Rh6DG504400 Rh7BG256700 |
| rosa_wichuraiana | Rw6G043690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1139 |
| AccBSI | CCGCTC | 1 cut(s) | 160 |
| AccII | CGCG | 1 cut(s) | 227 |
| AclI | AACGTT | 1 cut(s) | 1719 |
| AclWI | GGATC | 3 cut(s) | 286, 952, 972 |
| AcoI | YGGCCR | 4 cut(s) | 21, 45, 1453, 1516 |
| AcsI | RAATTY | 3 cut(s) | 411, 711, 1090 |
| AcuI | CTGAAG | 4 cut(s) | 563, 773, 932, 957 |
| AcvI | CACGTG | 1 cut(s) | 1294 |
| AfaI | GTAC | 4 cut(s) | 391, 749, 1078, 1352 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 61, 127, 1139 |
| AflII | CTTAAG | 1 cut(s) | 902 |
| AflIII | ACRYGT | 2 cut(s) | 225, 431 |
| AgsI | TTSAA | 9 cut(s) | 275, 329, 410, 495, 1040, 1088, 1288, 1655, 1679 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 34, 250 |
| AjnI | CCWGG | 1 cut(s) | 1465 |
| AluBI | AGCT | 8 cut(s) | 97, 139, 421, 461, 490, 527, 574, 1475 |
| AluI | AGCT | 8 cut(s) | 97, 139, 421, 461, 490, 527, 574, 1475 |
| Alw21I | GWGCWC | 1 cut(s) | 99 |
| Alw26I | GTCTC | 7 cut(s) | 94, 237, 467, 620, 1246, 1537, 1685 |
| AlwI | GGATC | 3 cut(s) | 286, 952, 972 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 682 |
| AoxI | GGCC | 6 cut(s) | 21, 45, 63, 1265, 1453, 1516 |
| ApeKI | GCWGC | 6 cut(s) | 79, 418, 533, 1247, 1458, 1475 |
| ApoI | RAATTY | 3 cut(s) | 411, 711, 1090 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1092 |
| AspLEI | GCGC | 2 cut(s) | 74, 1754 |
| AspS9I | GGNCC | 2 cut(s) | 1123, 1266 |
| AsuC2I | CCSGG | 2 cut(s) | 1016, 1409 |
| AsuHPI | GGTGA | 5 cut(s) | 100, 247, 1577, 1604, 1649 |
| AsuNHI | GCTAGC | 1 cut(s) | 376 |
| AvaII | GGWCC | 1 cut(s) | 1123 |
| BaeGI | GKGCMC | 1 cut(s) | 1276 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 420, 453 |
| BalI | TGGCCA | 1 cut(s) | 47 |
| BanII | GRGCYC | 1 cut(s) | 99 |
| BbrPI | CACGTG | 1 cut(s) | 1294 |
| BbsI | GAAGAC | 1 cut(s) | 854 |
| Bbv12I | GWGCWC | 1 cut(s) | 99 |
| BbvI | GCAGC | 6 cut(s) | 91, 430, 520, 1259, 1445, 1462 |
| BccI | CCATC | 4 cut(s) | 848, 1036, 1201, 1502 |
| BceAI | ACGGC | 1 cut(s) | 26 |
| BciT130I | CCWGG | 1 cut(s) | 1467 |
| BciVI | GTATCC | 2 cut(s) | 156, 421 |
| BcnI | CCSGG | 2 cut(s) | 1016, 1409 |
| BcoDI | GTCTC | 7 cut(s) | 94, 237, 467, 620, 1246, 1537, 1685 |
| BfaI | CTAG | 3 cut(s) | 377, 1007, 1362 |
| BfmI | CTRYAG | 3 cut(s) | 534, 674, 1245 |
| BfoI | RGCGCY | 1 cut(s) | 75 |
| BfrI | CTTAAG | 1 cut(s) | 902 |
| BfuI | GTATCC | 2 cut(s) | 156, 421 |
| BlpI | GCTNAGC | 1 cut(s) | 75 |
| Bme1390I | CCNGG | 3 cut(s) | 1016, 1409, 1467 |
| Bme18I | GGWCC | 1 cut(s) | 1123 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 34, 250 |
| BmgT120I | GGNCC | 2 cut(s) | 1123, 1266 |
| BmiI | GGNNCC | 3 cut(s) | 132, 1124, 1125 |
| BmrFI | CCNGG | 3 cut(s) | 1016, 1409, 1467 |
| BmsI | GCATC | 5 cut(s) | 142, 277, 302, 892, 1480 |
| BmtI | GCTAGC | 1 cut(s) | 380 |
| BpiI | GAAGAC | 1 cut(s) | 854 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 17, 49, 86, 118 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 75 |
| BpuEI | CTTGAG | 2 cut(s) | 737, 1287 |
| BpuMI | CCSGG | 2 cut(s) | 1016, 1409 |
| BsaAI | YACGTR | 2 cut(s) | 638, 1294 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1113 |
| BsaI | GGTCTC | 1 cut(s) | 1685 |
| BsaJI | CCNNGG | 5 cut(s) | 24, 42, 1015, 1465, 1647 |
| BsaWI | WCCGGW | 1 cut(s) | 133 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 61, 127, 1139 |
| Bse1I | ACTGG | 2 cut(s) | 712, 1695 |
| Bse3DI | GCAATG | 3 cut(s) | 371, 392, 844 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1113 |
| BseBI | CCWGG | 1 cut(s) | 1467 |
| BseDI | CCNNGG | 5 cut(s) | 24, 42, 1015, 1465, 1647 |
| BseGI | GGATG | 6 cut(s) | 317, 765, 1183, 1210, 1495, 1538 |
| BseJI | GATNNNNATC | 1 cut(s) | 1113 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 61, 127, 1139 |
| BseMI | GCAATG | 3 cut(s) | 371, 392, 844 |
| BseMII | CTCAG | 8 cut(s) | 89, 309, 584, 600, 674, 1337, 1361, 1620 |
| BseNI | ACTGG | 2 cut(s) | 712, 1695 |
| BseRI | GAGGAG | 3 cut(s) | 22, 44, 89 |
| BseSI | GKGCMC | 1 cut(s) | 1276 |
| BseX3I | CGGCCG | 1 cut(s) | 21 |
| BseXI | GCAGC | 6 cut(s) | 91, 430, 520, 1259, 1445, 1462 |
| BsgI | GTGCAG | 1 cut(s) | 1719 |
| Bsh1236I | CGCG | 1 cut(s) | 227 |
| Bsh1285I | CGRYCG | 2 cut(s) | 24, 118 |
| BshFI | GGCC | 6 cut(s) | 23, 47, 65, 1267, 1455, 1518 |
| BsiEI | CGRYCG | 2 cut(s) | 24, 118 |
| BsiHKAI | GWGCWC | 1 cut(s) | 99 |
| BsiSI | CCGG | 5 cut(s) | 69, 134, 1015, 1264, 1408 |
| BslFI | GGGAC | 2 cut(s) | 1032, 1109 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 61, 127, 1139 |
| BsmAI | GTCTC | 7 cut(s) | 94, 237, 467, 620, 1246, 1537, 1685 |
| BsmBI | CGTCTC | 3 cut(s) | 94, 237, 467 |
| BsmFI | GGGAC | 2 cut(s) | 1032, 1109 |
| BsnI | GGCC | 6 cut(s) | 23, 47, 65, 1267, 1455, 1518 |
| Bso31I | GGTCTC | 1 cut(s) | 1685 |
| Bsp1286I | GDGCHC | 2 cut(s) | 99, 1276 |
| Bsp143I | GATC | 4 cut(s) | 115, 291, 944, 964 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 75 |
| BspANI | GGCC | 6 cut(s) | 23, 47, 65, 1267, 1455, 1518 |
| BspCNI | CTCAG | 8 cut(s) | 88, 310, 583, 601, 675, 1338, 1362, 1621 |
| BspFNI | CGCG | 1 cut(s) | 227 |
| BspHI | TCATGA | 1 cut(s) | 850 |
| BspLI | GGNNCC | 3 cut(s) | 132, 1124, 1125 |
| BspMAI | CTGCAG | 3 cut(s) | 538, 678, 1249 |
| BspOI | GCTAGC | 1 cut(s) | 380 |
| BspPI | GGATC | 3 cut(s) | 286, 952, 972 |
| BspTI | CTTAAG | 1 cut(s) | 902 |
| BspTNI | GGTCTC | 1 cut(s) | 1685 |
| BsrBI | CCGCTC | 1 cut(s) | 160 |
| BsrDI | GCAATG | 3 cut(s) | 371, 392, 844 |
| BsrI | ACTGG | 2 cut(s) | 712, 1695 |
| BssECI | CCNNGG | 5 cut(s) | 24, 42, 1015, 1465, 1647 |
| BssMI | GATC | 4 cut(s) | 115, 291, 944, 964 |
| Bst2UI | CCWGG | 1 cut(s) | 1467 |
| Bst4CI | ACNGT | 5 cut(s) | 389, 951, 1330, 1531, 1613 |
| Bst6I | CTCTTC | 5 cut(s) | 333, 347, 567, 1035, 1707 |
| BstAFI | CTTAAG | 1 cut(s) | 902 |
| BstBAI | YACGTR | 2 cut(s) | 638, 1294 |
| BstC8I | GCNNGC | 4 cut(s) | 49, 378, 488, 1299 |
| BstDEI | CTNAG | 9 cut(s) | 75, 318, 469, 570, 609, 683, 1346, 1370, 1629 |
| BstDSI | CCRYGG | 2 cut(s) | 42, 1647 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 125 |
| BstF5I | GGATG | 6 cut(s) | 317, 765, 1183, 1210, 1495, 1538 |
| BstFNI | CGCG | 1 cut(s) | 227 |
| BstH2I | RGCGCY | 1 cut(s) | 75 |
| BstHHI | GCGC | 2 cut(s) | 74, 1754 |
| BstKTI | GATC | 4 cut(s) | 118, 294, 947, 967 |
| BstMAI | GTCTC | 7 cut(s) | 94, 237, 467, 620, 1246, 1537, 1685 |
| BstMBI | GATC | 4 cut(s) | 115, 291, 944, 964 |
| BstMCI | CGRYCG | 2 cut(s) | 24, 118 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 71, 166, 175, 212, 224, 533, 700, 1455 |
| BstNI | CCWGG | 1 cut(s) | 1467 |
| BstNSI | RCATGY | 2 cut(s) | 435, 1645 |
| BstSCI | CCNGG | 3 cut(s) | 1014, 1407, 1465 |
| BstSFI | CTRYAG | 3 cut(s) | 534, 674, 1245 |
| BstSLI | GKGCMC | 1 cut(s) | 1276 |
| BstSNI | TACGTA | 1 cut(s) | 638 |
| BstUI | CGCG | 1 cut(s) | 227 |
| BstV1I | GCAGC | 6 cut(s) | 91, 430, 520, 1259, 1445, 1462 |
| BstV2I | GAAGAC | 1 cut(s) | 854 |
| BstX2I | RGATCY | 1 cut(s) | 291 |
| BstYI | RGATCY | 1 cut(s) | 291 |
| BstZI | CGGCCG | 1 cut(s) | 21 |
| BsuI | GTATCC | 2 cut(s) | 156, 421 |
| BsuRI | GGCC | 6 cut(s) | 23, 47, 65, 1267, 1455, 1518 |
| BtgI | CCRYGG | 2 cut(s) | 42, 1647 |
| BtgZI | GCGATG | 2 cut(s) | 196, 1265 |
| BtsCI | GGATG | 6 cut(s) | 317, 765, 1183, 1210, 1495, 1538 |
| BtsIMutI | CAGTG | 4 cut(s) | 315, 947, 1618, 1702 |
| Cac8I | GCNNGC | 4 cut(s) | 49, 378, 488, 1299 |
| CaiI | CAGNNNCTG | 1 cut(s) | 682 |
| CciI | TCATGA | 1 cut(s) | 850 |
| CfoI | GCGC | 2 cut(s) | 74, 1754 |
| Cfr13I | GGNCC | 2 cut(s) | 1123, 1266 |
| CseI | GACGC | 2 cut(s) | 233, 659 |
| Csp6I | GTAC | 4 cut(s) | 390, 748, 1077, 1351 |
| CviAII | CATG | 6 cut(s) | 432, 499, 699, 851, 973, 1642 |
| CviQI | GTAC | 4 cut(s) | 390, 748, 1077, 1351 |
| DdeI | CTNAG | 9 cut(s) | 75, 318, 469, 570, 609, 683, 1346, 1370, 1629 |
| DpnI | GATC | 4 cut(s) | 117, 293, 946, 966 |
| DpnII | GATC | 4 cut(s) | 115, 291, 944, 964 |
| DriI | GACNNNNNGTC | 2 cut(s) | 34, 250 |
| EaeI | YGGCCR | 4 cut(s) | 21, 45, 1453, 1516 |
| EagI | CGGCCG | 1 cut(s) | 21 |
| Eam1104I | CTCTTC | 5 cut(s) | 333, 347, 567, 1035, 1707 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 34, 250 |
| EarI | CTCTTC | 5 cut(s) | 333, 347, 567, 1035, 1707 |
| EciI | GGCGGA | 4 cut(s) | 28, 350, 957, 1179 |
| Ecl136II | GAGCTC | 1 cut(s) | 97 |
| EclXI | CGGCCG | 1 cut(s) | 21 |
| Eco105I | TACGTA | 1 cut(s) | 638 |
| Eco24I | GRGCYC | 1 cut(s) | 99 |
| Eco31I | GGTCTC | 1 cut(s) | 1685 |
| Eco32I | GATATC | 1 cut(s) | 632 |
| Eco47I | GGWCC | 1 cut(s) | 1123 |
| Eco52I | CGGCCG | 1 cut(s) | 21 |
| Eco53kI | GAGCTC | 1 cut(s) | 97 |
| Eco57I | CTGAAG | 4 cut(s) | 563, 773, 932, 957 |
| Eco72I | CACGTG | 1 cut(s) | 1294 |
| EcoICRI | GAGCTC | 1 cut(s) | 97 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 125 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1123 |
| EcoRI | GAATTC | 1 cut(s) | 711 |
| EcoRII | CCWGG | 1 cut(s) | 1465 |
| EcoRV | GATATC | 1 cut(s) | 632 |
| EcoT22I | ATGCAT | 1 cut(s) | 885 |
| EcoT38I | GRGCYC | 1 cut(s) | 99 |
| Esp3I | CGTCTC | 3 cut(s) | 94, 237, 467 |
| FaeI | CATG | 6 cut(s) | 435, 502, 702, 854, 976, 1645 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1741, 1773 |
| FaqI | GGGAC | 2 cut(s) | 1032, 1109 |
| FatI | CATG | 6 cut(s) | 431, 498, 698, 850, 972, 1641 |
| FauI | CCCGC | 1 cut(s) | 138 |
| FokI | GGATG | 6 cut(s) | 324, 772, 1190, 1197, 1502, 1525 |
| FriOI | GRGCYC | 1 cut(s) | 99 |
| FspBI | CTAG | 3 cut(s) | 377, 1007, 1362 |
| GlaI | GCGC | 2 cut(s) | 73, 1753 |
| HaeII | RGCGCY | 1 cut(s) | 75 |
| HaeIII | GGCC | 6 cut(s) | 23, 47, 65, 1267, 1455, 1518 |
| HapII | CCGG | 5 cut(s) | 69, 134, 1015, 1264, 1408 |
| HgaI | GACGC | 2 cut(s) | 233, 659 |
| HhaI | GCGC | 2 cut(s) | 74, 1754 |
| Hin1II | CATG | 6 cut(s) | 435, 502, 702, 854, 976, 1645 |
| Hin6I | GCGC | 2 cut(s) | 72, 1752 |
| HinP1I | GCGC | 2 cut(s) | 72, 1752 |
| HincII | GTYRAC | 1 cut(s) | 303 |
| HindII | GTYRAC | 1 cut(s) | 303 |
| HindIII | AAGCTT | 1 cut(s) | 488 |
| HpaII | CCGG | 5 cut(s) | 69, 134, 1015, 1264, 1408 |
| HphI | GGTGA | 5 cut(s) | 100, 247, 1577, 1604, 1649 |
| Hpy166II | GTNNAC | 1 cut(s) | 303 |
| Hpy188I | TCNGA | 7 cut(s) | 13, 94, 223, 282, 582, 823, 912 |
| Hpy8I | GTNNAC | 1 cut(s) | 303 |
| HpyAV | CCTTC | 3 cut(s) | 115, 748, 932 |
| HpyCH4III | ACNGT | 5 cut(s) | 389, 951, 1330, 1531, 1613 |
| HpyCH4IV | ACGT | 5 cut(s) | 87, 476, 637, 1293, 1719 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 71, 166, 175, 212, 224, 533, 700, 1455 |
| HpyF3I | CTNAG | 9 cut(s) | 75, 318, 469, 570, 609, 683, 1346, 1370, 1629 |
| HpySE526I | ACGT | 5 cut(s) | 87, 476, 637, 1293, 1719 |
| Hsp92II | CATG | 6 cut(s) | 435, 502, 702, 854, 976, 1645 |
| HspAI | GCGC | 2 cut(s) | 72, 1752 |
| KflI | GGGWCCC | 1 cut(s) | 1123 |
| Kzo9I | GATC | 4 cut(s) | 115, 291, 944, 964 |
| LmnI | GCTCC | 4 cut(s) | 102, 136, 157, 1472 |
| Lsp1109I | GCAGC | 6 cut(s) | 91, 430, 520, 1259, 1445, 1462 |
| LweI | GCATC | 5 cut(s) | 142, 277, 302, 892, 1480 |
| MaeI | CTAG | 3 cut(s) | 377, 1007, 1362 |
| MaeII | ACGT | 5 cut(s) | 87, 476, 637, 1293, 1719 |
| MaeIII | GTNAC | 4 cut(s) | 603, 1183, 1637, 1663 |
| MalI | GATC | 4 cut(s) | 117, 293, 946, 966 |
| MbiI | CCGCTC | 1 cut(s) | 160 |
| MboI | GATC | 4 cut(s) | 115, 291, 944, 964 |
| MflI | RGATCY | 1 cut(s) | 291 |
| MhlI | GDGCHC | 2 cut(s) | 99, 1276 |
| MlsI | TGGCCA | 1 cut(s) | 47 |
| MluCI | AATT | 7 cut(s) | 196, 411, 448, 711, 888, 1090, 1444 |
| MluI | ACGCGT | 1 cut(s) | 225 |
| MluNI | TGGCCA | 1 cut(s) | 47 |
| MlyI | GAGTC | 5 cut(s) | 17, 23, 901, 1331, 1391 |
| Mox20I | TGGCCA | 1 cut(s) | 47 |
| Mph1103I | ATGCAT | 1 cut(s) | 885 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1092 |
| MscI | TGGCCA | 1 cut(s) | 47 |
| MseI | TTAA | 5 cut(s) | 765, 903, 1161, 1233, 1310 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1646 |
| Msp20I | TGGCCA | 1 cut(s) | 47 |
| MspA1I | CMGCKG | 2 cut(s) | 169, 1458 |
| MspCI | CTTAAG | 1 cut(s) | 902 |
| MspI | CCGG | 5 cut(s) | 69, 134, 1015, 1264, 1408 |
| MspR9I | CCNGG | 3 cut(s) | 1016, 1409, 1467 |
| MvaI | CCWGG | 1 cut(s) | 1467 |
| MvnI | CGCG | 1 cut(s) | 227 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 71, 166, 175, 212, 224, 533, 700, 1455 |
| NciI | CCSGG | 2 cut(s) | 1016, 1409 |
| NdeII | GATC | 4 cut(s) | 115, 291, 944, 964 |
| NheI | GCTAGC | 1 cut(s) | 376 |
| NlaIII | CATG | 6 cut(s) | 435, 502, 702, 854, 976, 1645 |
| NlaIV | GGNNCC | 3 cut(s) | 132, 1124, 1125 |
| NmeAIII | GCCGAG | 1 cut(s) | 49 |
| NmuCI | GTSAC | 2 cut(s) | 1637, 1663 |
| NsiI | ATGCAT | 1 cut(s) | 885 |
| NspI | RCATGY | 2 cut(s) | 435, 1645 |
| PagI | TCATGA | 1 cut(s) | 850 |
| PciI | ACATGT | 1 cut(s) | 431 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1092 |
| PfeI | GAWTC | 5 cut(s) | 238, 275, 329, 382, 1109 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1139 |
| Ple19I | CGATCG | 1 cut(s) | 118 |
| PleI | GAGTC | 5 cut(s) | 16, 23, 901, 1331, 1390 |
| PmaCI | CACGTG | 1 cut(s) | 1294 |
| PmlI | CACGTG | 1 cut(s) | 1294 |
| PpsI | GAGTC | 5 cut(s) | 16, 23, 901, 1331, 1390 |
| Ppu21I | YACGTR | 2 cut(s) | 638, 1294 |
| PpuMI | RGGWCCY | 1 cut(s) | 1123 |
| PscI | ACATGT | 1 cut(s) | 431 |
| Psp124BI | GAGCTC | 1 cut(s) | 99 |
| Psp1406I | AACGTT | 1 cut(s) | 1719 |
| Psp5II | RGGWCCY | 1 cut(s) | 1123 |
| Psp6I | CCWGG | 1 cut(s) | 1465 |
| PspCI | CACGTG | 1 cut(s) | 1294 |
| PspGI | CCWGG | 1 cut(s) | 1465 |
| PspN4I | GGNNCC | 3 cut(s) | 132, 1124, 1125 |
| PspPI | GGNCC | 2 cut(s) | 1123, 1266 |
| PspPPI | RGGWCCY | 1 cut(s) | 1123 |
| PstI | CTGCAG | 3 cut(s) | 538, 678, 1249 |
| PstNI | CAGNNNCTG | 1 cut(s) | 682 |
| PsuI | RGATCY | 1 cut(s) | 291 |
| PvuI | CGATCG | 1 cut(s) | 118 |
| RsaI | GTAC | 4 cut(s) | 391, 749, 1078, 1352 |
| RsaNI | GTAC | 4 cut(s) | 390, 748, 1077, 1351 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1646 |
| SacI | GAGCTC | 1 cut(s) | 99 |
| SaqAI | TTAA | 5 cut(s) | 765, 903, 1161, 1233, 1310 |
| Sau3AI | GATC | 4 cut(s) | 115, 291, 944, 964 |
| Sau96I | GGNCC | 2 cut(s) | 1123, 1266 |
| SchI | GAGTC | 5 cut(s) | 17, 23, 901, 1331, 1391 |
| ScrFI | CCNGG | 3 cut(s) | 1016, 1409, 1467 |
| SduI | GDGCHC | 2 cut(s) | 99, 1276 |
| SfaNI | GCATC | 5 cut(s) | 142, 277, 302, 892, 1480 |
| SfcI | CTRYAG | 3 cut(s) | 534, 674, 1245 |
| SinI | GGWCC | 1 cut(s) | 1123 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1646 |
| SmlI | CTYRAG | 3 cut(s) | 716, 902, 1302 |
| SmoI | CTYRAG | 3 cut(s) | 716, 902, 1302 |
| SnaBI | TACGTA | 1 cut(s) | 638 |
| Sse9I | AATT | 7 cut(s) | 196, 411, 448, 711, 888, 1090, 1444 |
| SspI | AATATT | 1 cut(s) | 816 |
| SspMI | CTAG | 3 cut(s) | 377, 1007, 1362 |
| SstI | GAGCTC | 1 cut(s) | 99 |
| StyD4I | CCNGG | 3 cut(s) | 1014, 1407, 1465 |
| TaaI | ACNGT | 5 cut(s) | 389, 951, 1330, 1531, 1613 |
| TaiI | ACGT | 5 cut(s) | 90, 479, 640, 1296, 1722 |
| TaqI | TCGA | 5 cut(s) | 114, 150, 241, 399, 953 |
| TasI | AATT | 7 cut(s) | 196, 411, 448, 711, 888, 1090, 1444 |
| TatI | WGTACW | 2 cut(s) | 389, 1076 |
| TauI | GCSGC | 5 cut(s) | 23, 172, 218, 1458, 1521 |
| TfiI | GAWTC | 5 cut(s) | 238, 275, 329, 382, 1109 |
| Tru1I | TTAA | 5 cut(s) | 765, 903, 1161, 1233, 1310 |
| Tru9I | TTAA | 5 cut(s) | 765, 903, 1161, 1233, 1310 |
| TscAI | CASTG | 4 cut(s) | 322, 954, 1618, 1702 |
| TseFI | GTSAC | 2 cut(s) | 1637, 1663 |
| TseI | GCWGC | 6 cut(s) | 79, 418, 533, 1247, 1458, 1475 |
| Tsp45I | GTSAC | 2 cut(s) | 1637, 1663 |
| TspDTI | ATGAA | 9 cut(s) | 199, 377, 471, 678, 855, 1182, 1268, 1405, 1749 |
| TspRI | CASTG | 4 cut(s) | 322, 954, 1618, 1702 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1139 |
| Vha464I | CTTAAG | 1 cut(s) | 902 |
| VpaK11BI | GGWCC | 1 cut(s) | 1123 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 125 |
| XapI | RAATTY | 3 cut(s) | 411, 711, 1090 |
| XceI | RCATGY | 2 cut(s) | 435, 1645 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1092 |
| XspI | CTAG | 3 cut(s) | 377, 1007, 1362 |
| Zsp2I | ATGCAT | 1 cut(s) | 885 |