MD15G1061800.v1.1

Eukaryotic protein of unknown function (DUF1764)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0013908
Physical Location & Seq
Forward (+)
4147701 .. 4149694
1994 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1061800.v1.1.491

Sequence Viewer

Length: 468 bp
ATGGGAAAAAAGAGTAAATCAAAAGCTTCCAGAGAGGTAAATGATGATGCAGTTGTTGTAGAAGAGGAAAAGCTGCCATCTTCGGCGAAAAAGCCTATTACTGAGGTTGATAAAACATCCTCAGGCAAAAAGAGGAAGAAACCCGAAACTGAAAAGGCTGAAAACCCTCTGTCTTCTGCAAAGAAGCCGGCTTCTGAGATTGATGAAATATTTGCAGCGAAAAAGAAGAAAACTGAGTCTGGAAAGGCTAAAAAACGAAAAGAAAACGCGATTGAGAAACCTGACCAGCCGAAGACAAAGAAGAAGGATAAAGGTATTAGAGATGGCGGATTTGGGGACATGTCTTCTCAGCCGAAAAAGAGAAGGCAGGATGGACTCACGGTTTACACAGAAGAGGAGTTGGGAATTAACAATGCAGATGCTGGAAACACTCCGCTCTGTCCGTTTGATTGTTCTTGTTGCTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1764

Protein Analysis

156

Amino Acids

17.02

Weight (kDa)

9.38

Isoelectric Point (pI)

56.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1764 PF08576 60 - 155 8.8e-27 Eukaryotic protein of unknown function (DUF1764)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013908)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G11760
fragaria_vesca FvH4_2g32140
malus_domestica MD08G1044600.v1.1 MD15G1061800.v1.1
prunus_persica Prupe.1G414500_v2.0.a1 Prupe.1G484700_v2.0.a1
pyrus_communis pycom08g03590
rosa_chinensis RchiOBHm_Chr6g0310541
rosa_multiflora Rmu_sc0005386.1_g000001 Rmu_sc0016392.1_g000003 Rmu_sc0020729.1_g000001
rosa_roxburghii Rroxscaffold_7G00158440
rosa_rugosa Rorug06G0381400 Rorug06G0381500
rosa_samantha Rh6AG495300 Rh6CG510300
rosa_wichuraiana Rw6G043080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 436
AccII CGCG 1 cut(s) 269
AciI CCGC 2 cut(s) 327, 434
AflIII ACRYGT 1 cut(s) 339
AluBI AGCT 2 cut(s) 26, 73
AluI AGCT 2 cut(s) 26, 73
AlwNI CAGNNNCTG 1 cut(s) 422
ApeKI GCWGC 2 cut(s) 73, 215
AxyI CCTNAGG 1 cut(s) 121
BbsI GAAGAC 3 cut(s) 165, 299, 336
BbvI GCAGC 2 cut(s) 60, 227
BccI CCATC 3 cut(s) 85, 317, 365
BisI GCNGC 2 cut(s) 74, 216
BlsI GCNGC 2 cut(s) 75, 217
BmsI GCATC 2 cut(s) 37, 409
BpiI GAAGAC 3 cut(s) 165, 299, 336
Bse118I RCCGGY 1 cut(s) 187
Bse21I CCTNAGG 1 cut(s) 121
BseGI GGATG 2 cut(s) 116, 376
BseMII CTCAG 5 cut(s) 93, 135, 186, 225, 362
BseRI GAGGAG 1 cut(s) 410
BseXI GCAGC 2 cut(s) 60, 227
Bsh1236I CGCG 1 cut(s) 269
BsiSI CCGG 1 cut(s) 188
BslFI GGGAC 1 cut(s) 350
BsmFI GGGAC 1 cut(s) 350
BspACI CCGC 2 cut(s) 327, 434
BspCNI CTCAG 5 cut(s) 94, 134, 187, 226, 361
BspFNI CGCG 1 cut(s) 269
BsrBI CCGCTC 1 cut(s) 436
BsrFI RCCGGY 1 cut(s) 187
BssAI RCCGGY 1 cut(s) 187
Bst4CI ACNGT 1 cut(s) 382
Bst6I CTCTTC 2 cut(s) 57, 387
BstC8I GCNNGC 1 cut(s) 189
BstDEI CTNAG 5 cut(s) 102, 121, 195, 234, 348
BstF5I GGATG 2 cut(s) 116, 376
BstFNI CGCG 1 cut(s) 269
BstNSI RCATGY 1 cut(s) 343
BstUI CGCG 1 cut(s) 269
BstV1I GCAGC 2 cut(s) 60, 227
BstV2I GAAGAC 3 cut(s) 165, 299, 336
Bsu36I CCTNAGG 1 cut(s) 121
BtsCI GGATG 2 cut(s) 116, 376
Cac8I GCNNGC 1 cut(s) 189
CaiI CAGNNNCTG 1 cut(s) 422
Cfr10I RCCGGY 1 cut(s) 187
CviAII CATG 1 cut(s) 340
CviJI RGCY 9 cut(s) 26, 73, 94, 158, 187, 191, 248, 289, 352
CviKI_1 RGCY 9 cut(s) 26, 73, 94, 158, 187, 191, 248, 289, 352
DdeI CTNAG 5 cut(s) 102, 121, 195, 234, 348
Eam1104I CTCTTC 2 cut(s) 57, 387
EarI CTCTTC 2 cut(s) 57, 387
EciI GGCGGA 1 cut(s) 342
Eco81I CCTNAGG 1 cut(s) 121
FaeI CATG 1 cut(s) 343
FaiI YATR 1 cut(s) 341
FaqI GGGAC 1 cut(s) 350
FatI CATG 1 cut(s) 339
Fnu4HI GCNGC 2 cut(s) 74, 216
FokI GGATG 2 cut(s) 103, 383
Fsp4HI GCNGC 2 cut(s) 74, 216
GluI GCNGC 2 cut(s) 74, 216
HapII CCGG 1 cut(s) 188
Hin1II CATG 1 cut(s) 343
HindIII AAGCTT 1 cut(s) 24
HinfI GANTC 2 cut(s) 236, 375
HpaII CCGG 1 cut(s) 188
Hpy166II GTNNAC 1 cut(s) 385
Hpy188I TCNGA 2 cut(s) 196, 467
Hpy188III TCNNGA 2 cut(s) 30, 240
Hpy8I GTNNAC 1 cut(s) 385
HpyAV CCTTC 2 cut(s) 298, 357
HpyCH4III ACNGT 1 cut(s) 382
HpyCH4V TGCA 4 cut(s) 50, 179, 215, 416
HpyF3I CTNAG 5 cut(s) 102, 121, 195, 234, 348
Hsp92II CATG 1 cut(s) 343
KroI GCCGGC 1 cut(s) 187
KroNI GCCGGC 1 cut(s) 189
LpnPI CCDG 8 cut(s) 43, 108, 201, 225, 294, 299, 353, 408
Lsp1109I GCAGC 2 cut(s) 60, 227
LweI GCATC 2 cut(s) 37, 409
MbiI CCGCTC 1 cut(s) 436
MboII GAAGA 9 cut(s) 72, 74, 148, 165, 238, 304, 313, 336, 404
MluCI AATT 1 cut(s) 405
MlyI GAGTC 2 cut(s) 245, 369
MnlI CCTC 7 cut(s) 28, 58, 97, 126, 130, 177, 388
MroNI GCCGGC 1 cut(s) 187
MseI TTAA 1 cut(s) 408
MspI CCGG 1 cut(s) 188
MvnI CGCG 1 cut(s) 269
NaeI GCCGGC 1 cut(s) 189
NgoMIV GCCGGC 1 cut(s) 187
NlaIII CATG 1 cut(s) 343
NspI RCATGY 1 cut(s) 343
PciI ACATGT 1 cut(s) 339
PdiI GCCGGC 1 cut(s) 189
PkrI GCNGC 2 cut(s) 75, 217
PleI GAGTC 2 cut(s) 244, 369
PpsI GAGTC 2 cut(s) 244, 369
PscI ACATGT 1 cut(s) 339
PstNI CAGNNNCTG 1 cut(s) 422
SaqAI TTAA 1 cut(s) 408
SatI GCNGC 2 cut(s) 74, 216
SchI GAGTC 2 cut(s) 245, 369
SetI ASST 6 cut(s) 28, 39, 75, 108, 283, 316
SfaNI GCATC 2 cut(s) 37, 409
Sse9I AATT 1 cut(s) 405
SsiI CCGC 2 cut(s) 327, 434
SspI AATATT 1 cut(s) 210
TaaI ACNGT 1 cut(s) 382
TasI AATT 1 cut(s) 405
Tru1I TTAA 1 cut(s) 408
Tru9I TTAA 1 cut(s) 408
TseI GCWGC 2 cut(s) 73, 215
TspDTI ATGAA 1 cut(s) 219
TspGWI ACGGA 1 cut(s) 432
XceI RCATGY 1 cut(s) 343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.