Rmu_sc0016392.1_g000003

Eukaryotic protein of unknown function (DUF1764)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0016392.1
Physical Location & Seq
Reverse (-)
14666 .. 15058
393 bp
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UTR
Exon/CDS
Intron
Rmu_sc0016392.1_g000003.1.cds

Sequence Viewer

Length: 393 bp
atgggcaagaagagtaaatctaagactcctaaagaggttaaagaagatagtgttgtagaaaagactgttgtggaagaagagaaacctacatcttctgcaaagaagcctgcctctgtgattgatgagatattcgccgggaaaaagaggaagaaagctgaagccgaaaaggctaaaaagaaaactgaagaggcgagtgaaaaacccgacaagcctaagagaaagaagaagaaagatttaggctttgaagacggtgcatttgtggagccaaattctgggtcaaaaaagagaacaaacgatggccttgctatctatacagaagaagagttgggtatcaacaaagcagatgctggaagcacccctctttgtccatttgattgctcttgttgcttctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

130

Amino Acids

14.26

Weight (kDa)

9.05

Isoelectric Point (pI)

44.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013908)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 272
AcsI RAATTY 1 cut(s) 268
AcuI CTGAAG 2 cut(s) 177, 204
AfiI CCNNNNNNNGG 1 cut(s) 272
AgsI TTSAA 1 cut(s) 245
AluBI AGCT 1 cut(s) 155
AluI AGCT 1 cut(s) 155
AlwNI CAGNNNCTG 1 cut(s) 347
AoxI GGCC 1 cut(s) 298
ApoI RAATTY 1 cut(s) 268
ArsI GACNNNNNNTTYG 4 cut(s) 239, 260, 271, 292
AsuC2I CCSGG 1 cut(s) 136
BbsI GAAGAC 1 cut(s) 252
BccI CCATC 1 cut(s) 290
BcgI CGANNNNNNTGC 2 cut(s) 284, 318
BcnI CCSGG 1 cut(s) 136
BglI GCCNNNNNGGC 1 cut(s) 167
Bme1390I CCNGG 1 cut(s) 136
BmiI GGNNCC 1 cut(s) 264
BmrFI CCNGG 1 cut(s) 136
BmsI GCATC 1 cut(s) 334
BpiI GAAGAC 1 cut(s) 252
BpuMI CCSGG 1 cut(s) 136
Bsc4I CCNNNNNNNGG 1 cut(s) 272
BseLI CCNNNNNNNGG 1 cut(s) 272
BshFI GGCC 1 cut(s) 300
BsiSI CCGG 1 cut(s) 135
BslI CCNNNNNNNGG 1 cut(s) 272
BsnI GGCC 1 cut(s) 300
BspANI GGCC 1 cut(s) 300
BspLI GGNNCC 1 cut(s) 264
Bst4CI ACNGT 2 cut(s) 67, 251
Bst6I CTCTTC 4 cut(s) 5, 72, 180, 315
BstC8I GCNNGC 1 cut(s) 108
BstDEI CTNAG 2 cut(s) 21, 213
BstMWI GCNNNNNNNGC 2 cut(s) 167, 384
BstSCI CCNGG 1 cut(s) 134
BstV2I GAAGAC 1 cut(s) 252
BsuRI GGCC 1 cut(s) 300
Cac8I GCNNGC 1 cut(s) 108
CaiI CAGNNNCTG 1 cut(s) 347
CviJI RGCY 8 cut(s) 106, 155, 161, 170, 211, 240, 265, 300
CviKI_1 RGCY 8 cut(s) 106, 155, 161, 170, 211, 240, 265, 300
DdeI CTNAG 2 cut(s) 21, 213
Eam1104I CTCTTC 4 cut(s) 5, 72, 180, 315
EarI CTCTTC 4 cut(s) 5, 72, 180, 315
Eco57I CTGAAG 2 cut(s) 177, 204
FaiI YATR 1 cut(s) 312
HaeIII GGCC 1 cut(s) 300
HapII CCGG 1 cut(s) 135
HinfI GANTC 1 cut(s) 25
HpaII CCGG 1 cut(s) 135
Hpy188I TCNGA 1 cut(s) 392
HpyCH4III ACNGT 2 cut(s) 67, 251
HpyCH4V TGCA 2 cut(s) 98, 254
HpyF10VI GCNNNNNNNGC 2 cut(s) 167, 384
HpyF3I CTNAG 2 cut(s) 21, 213
LmnI GCTCC 1 cut(s) 262
LpnPI CCDG 4 cut(s) 120, 148, 258, 333
LweI GCATC 1 cut(s) 334
MluCI AATT 1 cut(s) 268
MlyI GAGTC 1 cut(s) 19
MnlI CCTC 5 cut(s) 28, 121, 138, 181, 369
MseI TTAA 1 cut(s) 39
MspI CCGG 1 cut(s) 135
MspR9I CCNGG 1 cut(s) 136
MwoI GCNNNNNNNGC 2 cut(s) 167, 384
NciI CCSGG 1 cut(s) 136
NlaIV GGNNCC 1 cut(s) 264
PflMI CCANNNNNTGG 1 cut(s) 272
PleI GAGTC 1 cut(s) 19
PpsI GAGTC 1 cut(s) 19
PspN4I GGNNCC 1 cut(s) 264
PstNI CAGNNNCTG 1 cut(s) 347
SaqAI TTAA 1 cut(s) 39
SchI GAGTC 1 cut(s) 19
ScrFI CCNGG 1 cut(s) 136
SetI ASST 3 cut(s) 39, 88, 157
SfaNI GCATC 1 cut(s) 334
Sse9I AATT 1 cut(s) 268
StyD4I CCNGG 1 cut(s) 134
TaaI ACNGT 2 cut(s) 67, 251
TasI AATT 1 cut(s) 268
Tru1I TTAA 1 cut(s) 39
Tru9I TTAA 1 cut(s) 39
Van91I CCANNNNNTGG 1 cut(s) 272
XapI RAATTY 1 cut(s) 268
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.