MD15G1110600.v1.1

Guanine nucleotide-binding protein subunit gamma

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0014669
Physical Location & Seq
Reverse (-)
7740882 .. 7742076
1195 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1110600.v1.1.491

Sequence Viewer

Length: 390 bp
ATGGATAGCCAAGTAGAAGAAGAAAACCCGTCATCTTCTCCGGCAACAGGAAGAGGAGATGGTGGTGCTGGTGGAGGAGGAGGAGGAGTGGCGCTGCTGCCTCGTCATTTCGAAGACAGAGCAAGAGCTGGCCAGTTTCCCACTTTCATTGGCAAGCACAAACTGGCTGCTTCCATTTCCCATCTCGAAAGCCAAATCGACATCATCCAGAAAGAGCTGGACCACCTTGAGACAGTAGGTGAATCCTCCATTGTCTGCAAAGATCTCATTGCTACCGTTGAATCCACTTCTGATCCATTGCTTCCATGGACTAAAGGACCGGGTGAAGTAGGGTGGGATAGGTGGTTCCGGGGAGCCCACAACACCAAAAATCAGAGCCGCTGGATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
G-gamma

Protein Analysis

130

Amino Acids

13.89

Weight (kDa)

5.46

Isoelectric Point (pI)

51.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
G-gamma PF00631 62 - 118 3.2e-06 GGL domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014669)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g30640 FvH4_2g30640 FvH4_2g30640
malus_domestica MD08G1133500.v1.1 MD15G1110600.v1.1
prunus_persica Prupe.1G462900_v2.0.a1 Prupe.2G330000_v2.0.a1
pyrus_communis pycom15g10100
rosa_chinensis RchiOBHm_Chr6g0312271
rosa_laevigata RLG00000010337
rosa_multiflora Rmu_ssc0000424.1_g000004
rosa_rugosa Rorug06G0394500 Rorug06G0394600
rosa_samantha Rh6BG522800 Rh6CG528500 Rh6DG514000
rosa_wichuraiana Rw6G044510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 379
AclWI GGATC 1 cut(s) 287
AcoI YGGCCR 1 cut(s) 130
AfiI CCNNNNNNNGG 1 cut(s) 47
AgsI TTSAA 1 cut(s) 281
AloI GAACNNNNNNTCC 2 cut(s) 329, 361
AluBI AGCT 2 cut(s) 128, 217
AluI AGCT 2 cut(s) 128, 217
Alw26I GTCTC 1 cut(s) 224
AlwI GGATC 1 cut(s) 287
AoxI GGCC 1 cut(s) 130
ApeKI GCWGC 3 cut(s) 94, 97, 167
AspLEI GCGC 1 cut(s) 94
AspS9I GGNCC 2 cut(s) 220, 317
AsuC2I CCSGG 2 cut(s) 321, 350
AsuHPI GGTGA 2 cut(s) 251, 335
AsuII TTCGAA 1 cut(s) 111
AvaII GGWCC 2 cut(s) 220, 317
BalI TGGCCA 1 cut(s) 132
BanII GRGCYC 1 cut(s) 358
BbsI GAAGAC 1 cut(s) 120
BbvI GCAGC 3 cut(s) 81, 84, 154
BccI CCATC 2 cut(s) 53, 189
BcnI CCSGG 2 cut(s) 321, 350
BcoDI GTCTC 1 cut(s) 224
BfoI RGCGCY 1 cut(s) 95
BglII AGATCT 1 cut(s) 262
BisI GCNGC 4 cut(s) 95, 98, 168, 379
BlsI GCNGC 4 cut(s) 96, 99, 169, 380
Bme1390I CCNGG 2 cut(s) 321, 350
Bme18I GGWCC 2 cut(s) 220, 317
BmgT120I GGNCC 2 cut(s) 220, 317
BmiI GGNNCC 2 cut(s) 347, 355
BmrFI CCNGG 2 cut(s) 321, 350
BpiI GAAGAC 1 cut(s) 120
Bpu14I TTCGAA 1 cut(s) 111
BpuEI CTTGAG 1 cut(s) 248
BpuMI CCSGG 2 cut(s) 321, 350
BsaJI CCNNGG 2 cut(s) 305, 349
BsaXI ACNNNNNCTCC 2 cut(s) 72, 102
Bsc4I CCNNNNNNNGG 1 cut(s) 47
Bse1I ACTGG 2 cut(s) 133, 168
Bse3DI GCAATG 2 cut(s) 267, 296
BseDI CCNNGG 2 cut(s) 305, 349
BseGI GGATG 1 cut(s) 204
BseLI CCNNNNNNNGG 1 cut(s) 47
BseMI GCAATG 2 cut(s) 267, 296
BseNI ACTGG 2 cut(s) 133, 168
BseRI GAGGAG 5 cut(s) 69, 90, 93, 96, 99
BseXI GCAGC 3 cut(s) 81, 84, 154
BshFI GGCC 1 cut(s) 132
BsiSI CCGG 3 cut(s) 41, 320, 349
BslI CCNNNNNNNGG 1 cut(s) 47
BsmAI GTCTC 1 cut(s) 224
BsnI GGCC 1 cut(s) 132
Bsp119I TTCGAA 1 cut(s) 111
Bsp1286I GDGCHC 1 cut(s) 358
Bsp143I GATC 3 cut(s) 262, 292, 384
Bsp19I CCATGG 1 cut(s) 305
BspACI CCGC 1 cut(s) 379
BspANI GGCC 1 cut(s) 132
BspLI GGNNCC 2 cut(s) 347, 355
BspPI GGATC 1 cut(s) 287
BspT104I TTCGAA 1 cut(s) 111
BsrDI GCAATG 2 cut(s) 267, 296
BsrI ACTGG 2 cut(s) 133, 168
BssECI CCNNGG 2 cut(s) 305, 349
BssMI GATC 3 cut(s) 262, 292, 384
BssT1I CCWWGG 1 cut(s) 305
Bst4CI ACNGT 2 cut(s) 235, 277
Bst6I CTCTTC 1 cut(s) 46
BstBI TTCGAA 1 cut(s) 111
BstC8I GCNNGC 2 cut(s) 130, 155
BstDSI CCRYGG 1 cut(s) 305
BstF5I GGATG 1 cut(s) 204
BstH2I RGCGCY 1 cut(s) 95
BstHHI GCGC 1 cut(s) 94
BstKTI GATC 3 cut(s) 265, 295, 387
BstMAI GTCTC 1 cut(s) 224
BstMBI GATC 3 cut(s) 262, 292, 384
BstSCI CCNGG 2 cut(s) 319, 348
BstV1I GCAGC 3 cut(s) 81, 84, 154
BstV2I GAAGAC 1 cut(s) 120
BstX2I RGATCY 2 cut(s) 262, 384
BstYI RGATCY 2 cut(s) 262, 384
BsuRI GGCC 1 cut(s) 132
BtgI CCRYGG 1 cut(s) 305
BtsCI GGATG 1 cut(s) 204
Cac8I GCNNGC 2 cut(s) 130, 155
CfoI GCGC 1 cut(s) 94
Cfr13I GGNCC 2 cut(s) 220, 317
CspCI CAANNNNNGTGG 2 cut(s) 130, 165
CviAII CATG 1 cut(s) 306
CviJI RGCY 8 cut(s) 9, 128, 132, 167, 192, 217, 356, 378
CviKI_1 RGCY 8 cut(s) 9, 128, 132, 167, 192, 217, 356, 378
DpnI GATC 3 cut(s) 264, 294, 386
DpnII GATC 3 cut(s) 262, 292, 384
EaeI YGGCCR 1 cut(s) 130
Eam1104I CTCTTC 1 cut(s) 46
EarI CTCTTC 1 cut(s) 46
Eco130I CCWWGG 1 cut(s) 305
Eco24I GRGCYC 1 cut(s) 358
Eco47I GGWCC 2 cut(s) 220, 317
EcoT14I CCWWGG 1 cut(s) 305
EcoT38I GRGCYC 1 cut(s) 358
ErhI CCWWGG 1 cut(s) 305
FaeI CATG 1 cut(s) 309
FaiI YATR 1 cut(s) 307
FatI CATG 1 cut(s) 305
Fnu4HI GCNGC 4 cut(s) 95, 98, 168, 379
FokI GGATG 1 cut(s) 191
FriOI GRGCYC 1 cut(s) 358
Fsp4HI GCNGC 4 cut(s) 95, 98, 168, 379
GlaI GCGC 1 cut(s) 93
GluI GCNGC 4 cut(s) 95, 98, 168, 379
HaeII RGCGCY 1 cut(s) 95
HaeIII GGCC 1 cut(s) 132
HapII CCGG 3 cut(s) 41, 320, 349
HhaI GCGC 1 cut(s) 94
Hin1II CATG 1 cut(s) 309
Hin6I GCGC 1 cut(s) 92
HinP1I GCGC 1 cut(s) 92
HinfI GANTC 2 cut(s) 242, 281
HpaII CCGG 3 cut(s) 41, 320, 349
HphI GGTGA 2 cut(s) 251, 335
Hpy188I TCNGA 3 cut(s) 292, 375, 389
Hpy188III TCNNGA 2 cut(s) 185, 208
HpyCH4III ACNGT 2 cut(s) 235, 277
HpyCH4V TGCA 1 cut(s) 258
Hsp92II CATG 1 cut(s) 309
HspAI GCGC 1 cut(s) 92
Kzo9I GATC 3 cut(s) 262, 292, 384
LmnI GCTCC 1 cut(s) 353
Lsp1109I GCAGC 3 cut(s) 81, 84, 154
MalI GATC 3 cut(s) 264, 294, 386
MboI GATC 3 cut(s) 262, 292, 384
MboII GAAGA 5 cut(s) 27, 29, 32, 63, 125
MflI RGATCY 2 cut(s) 262, 384
MhlI GDGCHC 1 cut(s) 358
MlsI TGGCCA 1 cut(s) 132
MluNI TGGCCA 1 cut(s) 132
MnlI CCTC 7 cut(s) 47, 68, 71, 74, 77, 111, 256
Mox20I TGGCCA 1 cut(s) 132
MscI TGGCCA 1 cut(s) 132
Msp20I TGGCCA 1 cut(s) 132
MspA1I CMGCKG 1 cut(s) 381
MspI CCGG 3 cut(s) 41, 320, 349
MspR9I CCNGG 2 cut(s) 321, 350
NciI CCSGG 2 cut(s) 321, 350
NcoI CCATGG 1 cut(s) 305
NdeII GATC 3 cut(s) 262, 292, 384
NlaIII CATG 1 cut(s) 309
NlaIV GGNNCC 2 cut(s) 347, 355
NspV TTCGAA 1 cut(s) 111
PfeI GAWTC 2 cut(s) 242, 281
PkrI GCNGC 4 cut(s) 96, 99, 169, 380
PspN4I GGNNCC 2 cut(s) 347, 355
PspPI GGNCC 2 cut(s) 220, 317
PsuI RGATCY 2 cut(s) 262, 384
SatI GCNGC 4 cut(s) 95, 98, 168, 379
Sau3AI GATC 3 cut(s) 262, 292, 384
Sau96I GGNCC 2 cut(s) 220, 317
ScrFI CCNGG 2 cut(s) 321, 350
SduI GDGCHC 1 cut(s) 358
SetI ASST 5 cut(s) 130, 219, 228, 241, 344
SfuI TTCGAA 1 cut(s) 111
SinI GGWCC 2 cut(s) 220, 317
SmlI CTYRAG 1 cut(s) 227
SmoI CTYRAG 1 cut(s) 227
SsiI CCGC 1 cut(s) 379
StyD4I CCNGG 2 cut(s) 319, 348
StyI CCWWGG 1 cut(s) 305
TaaI ACNGT 2 cut(s) 235, 277
TaqI TCGA 3 cut(s) 111, 186, 198
TauI GCSGC 1 cut(s) 381
TfiI GAWTC 2 cut(s) 242, 281
TseI GCWGC 3 cut(s) 94, 97, 167
TspDTI ATGAA 1 cut(s) 136
VpaK11BI GGWCC 2 cut(s) 220, 317
XcmI CCANNNNNNNNNTGG 1 cut(s) 303
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.