pycom15g10100

Guanine nucleotide-binding protein subunit gamma

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0014669
Physical Location & Seq
Reverse (-)
6581603 .. 6582444
842 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g10100.4

Sequence Viewer

Length: 399 bp
ATGGATAACCAAGTAGAAGAAGAAAACCCCGCATCTTCTCCGGCAACAGGAAGAGGAGGTGGTCGTGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGTGGCGCTGCTGCCTCTTCATTTCGAAGACAGAGCAAGAGCTGGCCAGTTTCCCGCTTTCATTGGCAAGCACAAACTGGCTGCTTCCATTTCCCATCTCGAAAACCAAATCGACATCATCCAGAAAGAGCTGGACCACCTTGAGACAGTAGGTGAATCCTCCATTGTCTGCAAAGATCTCATTGCTACCGTTGAATCCACTTCTATTACGATCGATCCATTGACTAAAGGACCAGGTGAAGTAGGGTGGGATAGGTGGTTCCGAGGAGCCCATAACTCCAAAAATCAGAGCCGCTGGATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
G-gamma

Protein Analysis

133

Amino Acids

13.97

Weight (kDa)

5.68

Isoelectric Point (pI)

47.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014669)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g30640 FvH4_2g30640 FvH4_2g30640
malus_domestica MD08G1133500.v1.1 MD15G1110600.v1.1
prunus_persica Prupe.1G462900_v2.0.a1 Prupe.2G330000_v2.0.a1
pyrus_communis pycom15g10100
rosa_chinensis RchiOBHm_Chr6g0312271
rosa_laevigata RLG00000010337
rosa_multiflora Rmu_ssc0000424.1_g000004
rosa_rugosa Rorug06G0394500 Rorug06G0394600
rosa_samantha Rh6BG522800 Rh6CG528500 Rh6DG514000
rosa_wichuraiana Rw6G044510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 30, 150, 388
AclWI GGATC 1 cut(s) 305
AcoI YGGCCR 1 cut(s) 139
AfiI CCNNNNNNNGG 1 cut(s) 47
AgsI TTSAA 1 cut(s) 290
AjnI CCWGG 1 cut(s) 328
AloI GAACNNNNNNTCC 2 cut(s) 338, 370
AluBI AGCT 2 cut(s) 137, 226
AluI AGCT 2 cut(s) 137, 226
Alw26I GTCTC 1 cut(s) 233
AlwI GGATC 1 cut(s) 305
AoxI GGCC 1 cut(s) 139
ApeKI GCWGC 3 cut(s) 103, 106, 176
AspLEI GCGC 1 cut(s) 103
AspS9I GGNCC 2 cut(s) 229, 326
AsuHPI GGTGA 2 cut(s) 260, 344
AsuII TTCGAA 1 cut(s) 120
AvaII GGWCC 2 cut(s) 229, 326
BalI TGGCCA 1 cut(s) 141
BanII GRGCYC 1 cut(s) 367
BbsI GAAGAC 1 cut(s) 129
BbvI GCAGC 3 cut(s) 90, 93, 163
BccI CCATC 1 cut(s) 198
BciT130I CCWGG 1 cut(s) 330
BcoDI GTCTC 1 cut(s) 233
BfoI RGCGCY 1 cut(s) 104
BglII AGATCT 1 cut(s) 271
BisI GCNGC 4 cut(s) 104, 107, 177, 388
BlsI GCNGC 4 cut(s) 105, 108, 178, 389
Bme1390I CCNGG 1 cut(s) 330
Bme18I GGWCC 2 cut(s) 229, 326
BmgT120I GGNCC 2 cut(s) 229, 326
BmiI GGNNCC 2 cut(s) 356, 364
BmrFI CCNGG 1 cut(s) 330
BmsI GCATC 1 cut(s) 41
BpiI GAAGAC 1 cut(s) 129
Bpu14I TTCGAA 1 cut(s) 120
BpuEI CTTGAG 1 cut(s) 257
Bsa29I ATCGAT 1 cut(s) 309
BsaJI CCNNGG 1 cut(s) 358
BsaXI ACNNNNNCTCC 2 cut(s) 81, 111
Bsc4I CCNNNNNNNGG 1 cut(s) 47
Bse1I ACTGG 2 cut(s) 142, 177
Bse3DI GCAATG 1 cut(s) 276
BseBI CCWGG 1 cut(s) 330
BseCI ATCGAT 1 cut(s) 309
BseDI CCNNGG 1 cut(s) 358
BseGI GGATG 1 cut(s) 213
BseLI CCNNNNNNNGG 1 cut(s) 47
BseMI GCAATG 1 cut(s) 276
BseNI ACTGG 2 cut(s) 142, 177
BseXI GCAGC 3 cut(s) 90, 93, 163
Bsh1285I CGRYCG 1 cut(s) 309
BshFI GGCC 1 cut(s) 141
BshVI ATCGAT 1 cut(s) 309
BsiEI CGRYCG 1 cut(s) 309
BsiSI CCGG 1 cut(s) 41
BslI CCNNNNNNNGG 1 cut(s) 47
BsmAI GTCTC 1 cut(s) 233
BsnI GGCC 1 cut(s) 141
Bsp119I TTCGAA 1 cut(s) 120
Bsp1286I GDGCHC 1 cut(s) 367
Bsp143I GATC 4 cut(s) 271, 306, 310, 393
BspACI CCGC 3 cut(s) 30, 150, 388
BspANI GGCC 1 cut(s) 141
BspDI ATCGAT 1 cut(s) 309
BspLI GGNNCC 2 cut(s) 356, 364
BspPI GGATC 1 cut(s) 305
BspT104I TTCGAA 1 cut(s) 120
BsrDI GCAATG 1 cut(s) 276
BsrI ACTGG 2 cut(s) 142, 177
BssECI CCNNGG 1 cut(s) 358
BssMI GATC 4 cut(s) 271, 306, 310, 393
Bst2UI CCWGG 1 cut(s) 330
Bst4CI ACNGT 2 cut(s) 244, 286
Bst6I CTCTTC 2 cut(s) 46, 117
BstBI TTCGAA 1 cut(s) 120
BstC8I GCNNGC 2 cut(s) 139, 164
BstF5I GGATG 1 cut(s) 213
BstH2I RGCGCY 1 cut(s) 104
BstHHI GCGC 1 cut(s) 103
BstKTI GATC 4 cut(s) 274, 309, 313, 396
BstMAI GTCTC 1 cut(s) 233
BstMBI GATC 4 cut(s) 271, 306, 310, 393
BstMCI CGRYCG 1 cut(s) 309
BstNI CCWGG 1 cut(s) 330
BstSCI CCNGG 1 cut(s) 328
BstV1I GCAGC 3 cut(s) 90, 93, 163
BstV2I GAAGAC 1 cut(s) 129
BstX2I RGATCY 2 cut(s) 271, 393
BstYI RGATCY 2 cut(s) 271, 393
Bsu15I ATCGAT 1 cut(s) 309
BsuRI GGCC 1 cut(s) 141
BsuTUI ATCGAT 1 cut(s) 309
BtsCI GGATG 1 cut(s) 213
Cac8I GCNNGC 2 cut(s) 139, 164
CfoI GCGC 1 cut(s) 103
Cfr13I GGNCC 2 cut(s) 229, 326
ClaI ATCGAT 1 cut(s) 309
CsiI ACCWGGT 1 cut(s) 328
CviJI RGCY 6 cut(s) 137, 141, 176, 226, 365, 387
CviKI_1 RGCY 6 cut(s) 137, 141, 176, 226, 365, 387
DpnI GATC 4 cut(s) 273, 308, 312, 395
DpnII GATC 4 cut(s) 271, 306, 310, 393
EaeI YGGCCR 1 cut(s) 139
Eam1104I CTCTTC 2 cut(s) 46, 117
EarI CTCTTC 2 cut(s) 46, 117
Eco24I GRGCYC 1 cut(s) 367
Eco47I GGWCC 2 cut(s) 229, 326
EcoRII CCWGG 1 cut(s) 328
EcoT38I GRGCYC 1 cut(s) 367
FaiI YATR 1 cut(s) 369
FauI CCCGC 2 cut(s) 37, 157
Fnu4HI GCNGC 4 cut(s) 104, 107, 177, 388
FokI GGATG 1 cut(s) 200
FriOI GRGCYC 1 cut(s) 367
Fsp4HI GCNGC 4 cut(s) 104, 107, 177, 388
GlaI GCGC 1 cut(s) 102
GluI GCNGC 4 cut(s) 104, 107, 177, 388
HaeII RGCGCY 1 cut(s) 104
HaeIII GGCC 1 cut(s) 141
HapII CCGG 1 cut(s) 41
HhaI GCGC 1 cut(s) 103
Hin6I GCGC 1 cut(s) 101
HinP1I GCGC 1 cut(s) 101
HinfI GANTC 2 cut(s) 251, 290
HpaII CCGG 1 cut(s) 41
HphI GGTGA 2 cut(s) 260, 344
Hpy188I TCNGA 2 cut(s) 359, 384
Hpy188III TCNNGA 2 cut(s) 194, 217
HpyCH4III ACNGT 2 cut(s) 244, 286
HpyCH4V TGCA 1 cut(s) 267
HspAI GCGC 1 cut(s) 101
Kzo9I GATC 4 cut(s) 271, 306, 310, 393
LmnI GCTCC 1 cut(s) 362
Lsp1109I GCAGC 3 cut(s) 90, 93, 163
LweI GCATC 1 cut(s) 41
MabI ACCWGGT 1 cut(s) 328
MalI GATC 4 cut(s) 273, 308, 312, 395
MboI GATC 4 cut(s) 271, 306, 310, 393
MboII GAAGA 6 cut(s) 27, 29, 32, 63, 104, 134
MflI RGATCY 2 cut(s) 271, 393
MhlI GDGCHC 1 cut(s) 367
MlsI TGGCCA 1 cut(s) 141
MluNI TGGCCA 1 cut(s) 141
Mox20I TGGCCA 1 cut(s) 141
MscI TGGCCA 1 cut(s) 141
Msp20I TGGCCA 1 cut(s) 141
MspA1I CMGCKG 1 cut(s) 390
MspI CCGG 1 cut(s) 41
MspR9I CCNGG 1 cut(s) 330
MvaI CCWGG 1 cut(s) 330
NdeII GATC 4 cut(s) 271, 306, 310, 393
NlaIV GGNNCC 2 cut(s) 356, 364
NspV TTCGAA 1 cut(s) 120
PfeI GAWTC 2 cut(s) 251, 290
PkrI GCNGC 4 cut(s) 105, 108, 178, 389
Ple19I CGATCG 1 cut(s) 309
Psp6I CCWGG 1 cut(s) 328
PspGI CCWGG 1 cut(s) 328
PspN4I GGNNCC 2 cut(s) 356, 364
PspPI GGNCC 2 cut(s) 229, 326
PsuI RGATCY 2 cut(s) 271, 393
PvuI CGATCG 1 cut(s) 309
SatI GCNGC 4 cut(s) 104, 107, 177, 388
Sau3AI GATC 4 cut(s) 271, 306, 310, 393
Sau96I GGNCC 2 cut(s) 229, 326
ScrFI CCNGG 1 cut(s) 330
SduI GDGCHC 1 cut(s) 367
SetI ASST 7 cut(s) 61, 139, 228, 237, 250, 334, 353
SexAI ACCWGGT 1 cut(s) 328
SfaNI GCATC 1 cut(s) 41
SfuI TTCGAA 1 cut(s) 120
SinI GGWCC 2 cut(s) 229, 326
SmlI CTYRAG 1 cut(s) 236
SmoI CTYRAG 1 cut(s) 236
SsiI CCGC 3 cut(s) 30, 150, 388
StyD4I CCNGG 1 cut(s) 328
TaaI ACNGT 2 cut(s) 244, 286
TaqI TCGA 4 cut(s) 120, 195, 207, 309
TauI GCSGC 1 cut(s) 390
TfiI GAWTC 2 cut(s) 251, 290
TseI GCWGC 3 cut(s) 103, 106, 176
TspDTI ATGAA 2 cut(s) 104, 145
VpaK11BI GGWCC 2 cut(s) 229, 326
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.