Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0012331

Physical Location & Seq

Genomic Coordinates Reverse (-)

9923364 .. 9933987

Gene Structure 10624 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1136000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1359 bp

ATGGCAGAGGAGGGAGCGGGAGCGGGGGCGGGAGGGAGTGAAGTAGTACTCTCTGCTCCGCCAACTCCAATTCGCCGCGTTCTTCTGATCTCCGCCGGTGCCAGTCACTCTGTTGCTCTTCTCTCTGAAAATGTGTTTTGCTCCTGGGGACGAGGAGAGGATGGGCAGTTAGGCCATGGTGATGCCGAGGACCGACTTTTACCTACGCATTTAAGCGCATTGGACGGCCATGAAATAGTGTCTATTACTTGTGGAGCTGATCATACAATTGCTTACTCCAACTCTCGTTCGGAAGTTTATAGTTGGGGATGGGGTGACTTTGGGAGATTGGGTCATGGTAATTCTAGTGACTTGTTTACACCTCAGCCAATAAAAGCATTACATGGTATTAAGATAAGGCAAATTGCTTGCGGGGATAGTCATTGTTTGGCAGTGACGATGGAAGGTGAGGTGCAAAGTTGGGGGCGAAATCAAAATGGTCAGCTTGGTCTTGGTACCACTGAAGACTCTCTTGTACCACAGAAAATTCAAGCGTTTCAGGGGTTATCTGTCAAAATGGTTGCTGCTGGTGCTGAACATACTGCAGCTGTCACAGAAGATGGGTCGCTCTATGGGTGGGGCTGGGGCCGATATGGAAACTTGGGCCTAGGTGATAGGAACGATCGCATGGTTCCGGAGAGGGTTTCTATGGTTAATAGTGAGAAGATGGTTATGGTTGCGTGTGGGTGGAGGCACACGATATCTGTTTCCTCATCGGGTCGATTGTACACATATGGTTGGAGCAAATATGGTCAACTGGGACATGGGGATTTTGAGGATCACCTTGTTCCTCACGAGCTAGAAGCCTTGAGTGACAAATTTATTTGTGAGACAGCTGGTGGTTGGAGGCATACCATGGCACTCACATCTGACGGAATACTCTATGGCTGGGGTTGGAATAAGTTTGGACAAGTTGGAGTGGGTGACAACATCGATCACTGTTCTCCTGTGCAAGTTGAATTTCCAAATGAGCAGAAAGTAGTTAAAATATCTTGTGGATGGAGACACACACTTGCTGTTACTGAAAGACAAAATGTGTTCTCCTGGGGGAGAGGCACAAATGGACAGCTTGGGCATGGGGAATCTGTTGATCGGAACGTTCCAAAGATTATCGAGTCTTTGAGTGTTGATGGATCTACCGGGCAACAAATAGAATCTTCAAAAGTTGATCCATCTACAGGGAAAACTTGGGTGTCACCATCGGTGAGATATGCAGTTGTTCCTGATGAAACTGTTCGAGGGCAAGCATCTACTTCAGTCGGGGGTAATGGGAATGATGCAAGTGTTCCTGAATCCGACGTCAAACGCACACGGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0003674 GO:0003682 GO:0005085 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005829 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009628 GO:0009649 GO:0010224 GO:0019899 GO:0042752 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044427 GO:0044444 GO:0044446 GO:0044464 GO:0046983 GO:0050789 GO:0050896 GO:0051020 GO:0065007 GO:0065009 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03030 ko03410 ko03420 ko03430 ko03440 ko04120 ko05166 map00230 map00240 map01100 map03030 map03410 map03420 map03430 map03440 map04120 map05166

Pfam Domains

Protein Families

RCC1

Protein Analysis

453

Amino Acids

48.49

Weight (kDa)

5.63

Isoelectric Point (pI)

33.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_RLD	PF25390	20 - 127	2.7e-25	RCC1-like domain
RCC1	PF00415	48 - 91	4.1e-14	Regulator of chromosome condensation (RCC1) repeat
RCC1	PF00415	98 - 145	5.8e-16	Regulator of chromosome condensation (RCC1) repeat
WD40_RLD	PF25390	129 - 391	7.9e-77	RCC1-like domain
RCC1_2	PF13540	132 - 161	6.2e-10	Regulator of chromosome condensation (RCC1) repeat
RCC1	PF00415	148 - 197	8.9e-17	Regulator of chromosome condensation (RCC1) repeat
RCC1_2	PF13540	187 - 212	1.7e-08	Regulator of chromosome condensation (RCC1) repeat
RCC1	PF00415	200 - 248	7.2e-16	Regulator of chromosome condensation (RCC1) repeat
RCC1_2	PF13540	239 - 265	7e-07	Regulator of chromosome condensation (RCC1) repeat
RCC1	PF00415	252 - 301	7.4e-13	Regulator of chromosome condensation (RCC1) repeat
Alsin_RLD	PF25384	254 - 337	4.3e-08	Alsin RCC1-like domain
RCC1_2	PF13540	291 - 317	3.4e-09	Regulator of chromosome condensation (RCC1) repeat
RCC1	PF00415	304 - 353	2.8e-17	Regulator of chromosome condensation (RCC1) repeat
RCC1_2	PF13540	340 - 369	2.5e-10	Regulator of chromosome condensation (RCC1) repeat
RCC1	PF00415	359 - 388	1.3e-08	Regulator of chromosome condensation (RCC1) repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0012331)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63860
fragaria_vesca	FvH4_1g25000 FvH4_1g25000
malus_domestica	MD15G1136000.v1.1
prunus_persica	Prupe.4G277200_v2.0.a1
pyrus_communis	pycom15g12260
rosa_chinensis	RchiOBHm_Chr2g0122641
rosa_laevigata	RLG00000018697
rosa_multiflora	Rmu_sc0003133.1_g000023
rosa_roxburghii	Rroxscaffold_2G00121410
rosa_rugosa	Rorug02G0240700 Rorug02G0240800 Rorug02G0240900 Rorug02G0241000
rosa_samantha	Rh2AG298800 Rh2BG307700 Rh2CG285800 Rh2DG322400
rosa_wichuraiana	Rw2G023810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1341
Acc65I	GGTACC	1 cut(s)	494
AccB1I	GGYRCC	2 cut(s)	98, 494
AccBSI	CCGCTC	2 cut(s)	17, 23
AccII	CGCG	1 cut(s)	78
AccIII	TCCGGA	1 cut(s)	673
AciI	CCGC	7 cut(s)	17, 23, 29, 59, 76, 93, 411
AclI	AACGTT	1 cut(s)	1137
AclWI	GGATC	3 cut(s)	825, 1180, 1202
AcoI	YGGCCR	1 cut(s)	226
AcsI	RAATTY	3 cut(s)	525, 857, 998
AcuI	CTGAAG	2 cut(s)	522, 1278
AcyI	GRCGYC	1 cut(s)	1338
AfaI	GTAC	4 cut(s)	48, 496, 516, 767
AfiI	CCNNNNNNNGG	1 cut(s)	1217
AgsI	TTSAA	3 cut(s)	530, 998, 1200
AjnI	CCWGG	2 cut(s)	143, 1082
AluBI	AGCT	6 cut(s)	257, 484, 587, 838, 875, 1108
AluI	AGCT	6 cut(s)	257, 484, 587, 838, 875, 1108
Alw26I	GTCTC	2 cut(s)	863, 1036
AlwI	GGATC	3 cut(s)	825, 1180, 1202
Aor13HI	TCCGGA	1 cut(s)	673
AoxI	GGCC	4 cut(s)	172, 226, 625, 643
ApeKI	GCWGC	2 cut(s)	563, 584
ApoI	RAATTY	3 cut(s)	525, 857, 998
Asp700I	GAANNNNTTC	1 cut(s)	1272
Asp718I	GGTACC	1 cut(s)	494
AspA2I	CCTAGG	1 cut(s)	646
AspLEI	GCGC	1 cut(s)	218
AspS9I	GGNCC	3 cut(s)	190, 625, 643
AsuC2I	CCSGG	1 cut(s)	1180
AsuHPI	GGTGA	8 cut(s)	191, 326, 458, 662, 812, 974, 1227, 1255
AvaII	GGWCC	1 cut(s)	190
AvrII	CCTAGG	1 cut(s)	646
BanI	GGYRCC	2 cut(s)	98, 494
BauI	CACGAG	1 cut(s)	833
BbsI	GAAGAC	1 cut(s)	510
BbvCI	CCTCAGC	1 cut(s)	363
BbvI	GCAGC	2 cut(s)	550, 596
BccI	CCATC	9 cut(s)	155, 303, 433, 593, 700, 1032, 1163, 1219, 1246
BceAI	ACGGC	1 cut(s)	241
BciT130I	CCWGG	2 cut(s)	145, 1084
BclI	TGATCA	1 cut(s)	259
BcnI	CCSGG	1 cut(s)	1180
BcoDI	GTCTC	2 cut(s)	863, 1036
BfaI	CTAG	3 cut(s)	345, 647, 839
BfmI	CTRYAG	2 cut(s)	582, 1215
BisI	GCNGC	3 cut(s)	76, 564, 585
BlnI	CCTAGG	1 cut(s)	646
BlsI	GCNGC	3 cut(s)	77, 565, 586
BmcAI	AGTACT	1 cut(s)	48
Bme1390I	CCNGG	3 cut(s)	145, 1084, 1180
Bme18I	GGWCC	1 cut(s)	190
BmgT120I	GGNCC	3 cut(s)	190, 625, 643
BmiI	GGNNCC	4 cut(s)	100, 496, 626, 672
BmrFI	CCNGG	3 cut(s)	145, 1084, 1180
BmrI	ACTGGG	1 cut(s)	806
BmsI	GCATC	3 cut(s)	172, 1295, 1306
BmuI	ACTGGG	1 cut(s)	806
BpiI	GAAGAC	1 cut(s)	510
Bpu10I	CCTNAGC	1 cut(s)	363
BpuEI	CTTGAG	1 cut(s)	868
BpuMI	CCSGG	1 cut(s)	1180
Bsa29I	ATCGAT	1 cut(s)	972
BsaHI	GRCGYC	1 cut(s)	1338
BsaJI	CCNNGG	6 cut(s)	144, 175, 186, 646, 894, 1083
BsaWI	WCCGGW	1 cut(s)	673
BsaXI	ACNNNNNCTCC	2 cut(s)	316, 346
Bsc4I	CCNNNNNNNGG	1 cut(s)	1217
Bse118I	RCCGGY	1 cut(s)	95
Bse1I	ACTGG	2 cut(s)	102, 801
BseAI	TCCGGA	1 cut(s)	673
BseBI	CCWGG	2 cut(s)	145, 1084
BseCI	ATCGAT	1 cut(s)	972
BseDI	CCNNGG	6 cut(s)	144, 175, 186, 646, 894, 1083
BseGI	GGATG	3 cut(s)	166, 314, 1043
BseLI	CCNNNNNNNGG	1 cut(s)	1217
BseMII	CTCAG	1 cut(s)	377
BseNI	ACTGG	2 cut(s)	102, 801
BseRI	GAGGAG	2 cut(s)	23, 168
BseXI	GCAGC	2 cut(s)	550, 596
BseYI	CCCAGC	2 cut(s)	621, 927
Bsh1236I	CGCG	1 cut(s)	78
Bsh1285I	CGRYCG	1 cut(s)	664
BshFI	GGCC	4 cut(s)	174, 228, 627, 645
BshNI	GGYRCC	2 cut(s)	98, 494
BshVI	ATCGAT	1 cut(s)	972
BsiEI	CGRYCG	1 cut(s)	664
BsiSI	CCGG	3 cut(s)	96, 674, 1179
BslFI	GGGAC	2 cut(s)	162, 813
BslI	CCNNNNNNNGG	1 cut(s)	1217
BsmAI	GTCTC	2 cut(s)	863, 1036
BsmFI	GGGAC	2 cut(s)	162, 813
BsnI	GGCC	4 cut(s)	174, 228, 627, 645
Bsp13I	TCCGGA	1 cut(s)	673
Bsp1407I	TGTACA	1 cut(s)	765
Bsp143I	GATC	8 cut(s)	87, 259, 661, 817, 973, 1129, 1172, 1207
Bsp19I	CCATGG	2 cut(s)	175, 894
BspACI	CCGC	7 cut(s)	17, 23, 29, 59, 76, 93, 411
BspANI	GGCC	4 cut(s)	174, 228, 627, 645
BspCNI	CTCAG	1 cut(s)	376
BspDI	ATCGAT	1 cut(s)	972
BspEI	TCCGGA	1 cut(s)	673
BspFNI	CGCG	1 cut(s)	78
BspLI	GGNNCC	4 cut(s)	100, 496, 626, 672
BspMAI	CTGCAG	1 cut(s)	586
BspPI	GGATC	3 cut(s)	825, 1180, 1202
BspQI	GCTCTTC	1 cut(s)	123
BspT107I	GGYRCC	2 cut(s)	98, 494
BsrBI	CCGCTC	2 cut(s)	17, 23
BsrFI	RCCGGY	1 cut(s)	95
BsrGI	TGTACA	1 cut(s)	765
BsrI	ACTGG	2 cut(s)	102, 801
BssAI	RCCGGY	1 cut(s)	95
BssECI	CCNNGG	6 cut(s)	144, 175, 186, 646, 894, 1083
BssMI	GATC	8 cut(s)	87, 259, 661, 817, 973, 1129, 1172, 1207
BssNI	GRCGYC	1 cut(s)	1338
BssSI	CACGAG	1 cut(s)	833
BssT1I	CCWWGG	3 cut(s)	175, 646, 894
Bst2BI	CACGAG	1 cut(s)	833
Bst2UI	CCWGG	2 cut(s)	145, 1084
Bst4CI	ACNGT	3 cut(s)	980, 1273, 1353
Bst6I	CTCTTC	1 cut(s)	123
BstACI	GRCGYC	1 cut(s)	1338
BstAUI	TGTACA	1 cut(s)	765
BstC8I	GCNNGC	2 cut(s)	409, 1284
BstDEI	CTNAG	1 cut(s)	363
BstDSI	CCRYGG	2 cut(s)	175, 894
BstF5I	GGATG	3 cut(s)	166, 314, 1043
BstFNI	CGCG	1 cut(s)	78
BstHHI	GCGC	1 cut(s)	218
BstKTI	GATC	8 cut(s)	90, 262, 664, 820, 976, 1132, 1175, 1210
BstMAI	GTCTC	2 cut(s)	863, 1036
BstMBI	GATC	8 cut(s)	87, 259, 661, 817, 973, 1129, 1172, 1207
BstMCI	CGRYCG	1 cut(s)	664
BstMWI	GCNNNNNNNGC	1 cut(s)	569
BstNI	CCWGG	2 cut(s)	145, 1084
BstSCI	CCNGG	3 cut(s)	143, 1082, 1178
BstSFI	CTRYAG	2 cut(s)	582, 1215
BstUI	CGCG	1 cut(s)	78
BstV1I	GCAGC	2 cut(s)	550, 596
BstV2I	GAAGAC	1 cut(s)	510
BstX2I	RGATCY	1 cut(s)	1172
BstYI	RGATCY	1 cut(s)	1172
Bsu15I	ATCGAT	1 cut(s)	972
BsuRI	GGCC	4 cut(s)	174, 228, 627, 645
BsuTUI	ATCGAT	1 cut(s)	972
BtgI	CCRYGG	2 cut(s)	175, 894
BtsCI	GGATG	3 cut(s)	166, 314, 1043
BtsI	GCAGTG	1 cut(s)	438
BtsIMutI	CAGTG	3 cut(s)	438, 498, 976
Cac8I	GCNNGC	2 cut(s)	409, 1284
CfoI	GCGC	1 cut(s)	218
Cfr10I	RCCGGY	1 cut(s)	95
Cfr13I	GGNCC	3 cut(s)	190, 625, 643
ClaI	ATCGAT	1 cut(s)	972
Csp6I	GTAC	4 cut(s)	47, 495, 515, 766
CviAII	CATG	8 cut(s)	176, 230, 335, 383, 667, 803, 895, 1115
CviQI	GTAC	4 cut(s)	47, 495, 515, 766
DdeI	CTNAG	1 cut(s)	363
DpnI	GATC	8 cut(s)	89, 261, 663, 819, 975, 1131, 1174, 1209
DpnII	GATC	8 cut(s)	87, 259, 661, 817, 973, 1129, 1172, 1207
EaeI	YGGCCR	1 cut(s)	226
Eam1104I	CTCTTC	1 cut(s)	123
EarI	CTCTTC	1 cut(s)	123
EciI	GGCGGA	2 cut(s)	48, 82
Eco130I	CCWWGG	3 cut(s)	175, 646, 894
Eco32I	GATATC	1 cut(s)	741
Eco47I	GGWCC	1 cut(s)	190
Eco57I	CTGAAG	2 cut(s)	522, 1278
EcoRII	CCWGG	2 cut(s)	143, 1082
EcoRV	GATATC	1 cut(s)	741
EcoT14I	CCWWGG	3 cut(s)	175, 646, 894
ErhI	CCWWGG	3 cut(s)	175, 646, 894
FaeI	CATG	8 cut(s)	179, 233, 338, 386, 670, 806, 898, 1118
FalI	AAGNNNNNCTT	2 cut(s)	495, 527
FaqI	GGGAC	2 cut(s)	162, 813
FatI	CATG	8 cut(s)	175, 229, 334, 382, 666, 802, 894, 1114
FauI	CCCGC	4 cut(s)	10, 16, 22, 404
FauNDI	CATATG	1 cut(s)	772
FbaI	TGATCA	1 cut(s)	259
Fnu4HI	GCNGC	3 cut(s)	76, 564, 585
FokI	GGATG	3 cut(s)	173, 321, 1050
Fsp4HI	GCNGC	3 cut(s)	76, 564, 585
FspBI	CTAG	3 cut(s)	345, 647, 839
GlaI	GCGC	1 cut(s)	217
GluI	GCNGC	3 cut(s)	76, 564, 585
GsaI	CCCAGC	2 cut(s)	625, 931
HaeIII	GGCC	4 cut(s)	174, 228, 627, 645
HapII	CCGG	3 cut(s)	96, 674, 1179
HhaI	GCGC	1 cut(s)	218
Hin1I	GRCGYC	1 cut(s)	1338
Hin1II	CATG	8 cut(s)	179, 233, 338, 386, 670, 806, 898, 1118
Hin6I	GCGC	1 cut(s)	216
HinP1I	GCGC	1 cut(s)	216
HincII	GTYRAC	1 cut(s)	794
HindII	GTYRAC	1 cut(s)	794
HinfI	GANTC	5 cut(s)	506, 1121, 1154, 1193, 1331
HpaII	CCGG	3 cut(s)	96, 674, 1179
HphI	GGTGA	8 cut(s)	191, 326, 458, 662, 812, 974, 1227, 1255
Hpy166II	GTNNAC	3 cut(s)	357, 768, 794
Hpy188I	TCNGA	6 cut(s)	87, 127, 292, 910, 1134, 1336
Hpy188III	TCNNGA	4 cut(s)	674, 833, 1262, 1328
Hpy8I	GTNNAC	3 cut(s)	357, 768, 794
Hpy99I	CGWCG	1 cut(s)	1340
HpyAV	CCTTC	1 cut(s)	437
HpyCH4III	ACNGT	3 cut(s)	980, 1273, 1353
HpyCH4IV	ACGT	2 cut(s)	1137, 1338
HpyCH4V	TGCA	5 cut(s)	454, 584, 991, 1253, 1319
HpyF10VI	GCNNNNNNNGC	1 cut(s)	569
HpyF3I	CTNAG	1 cut(s)	363
HpySE526I	ACGT	2 cut(s)	1137, 1338
Hsp92I	GRCGYC	1 cut(s)	1338
Hsp92II	CATG	8 cut(s)	179, 233, 338, 386, 670, 806, 898, 1118
HspAI	GCGC	1 cut(s)	216
Kpn2I	TCCGGA	1 cut(s)	673
KpnI	GGTACC	1 cut(s)	498
Ksp22I	TGATCA	1 cut(s)	259
Kzo9I	GATC	8 cut(s)	87, 259, 661, 817, 973, 1129, 1172, 1207
LguI	GCTCTTC	1 cut(s)	123
LmnI	GCTCC	6 cut(s)	14, 20, 61, 146, 254, 780
Lsp1109I	GCAGC	2 cut(s)	550, 596
LweI	GCATC	3 cut(s)	172, 1295, 1306
MaeI	CTAG	3 cut(s)	345, 647, 839
MaeII	ACGT	2 cut(s)	1137, 1338
MaeIII	GTNAC	9 cut(s)	104, 314, 347, 433, 589, 851, 962, 1057, 1233
MalI	GATC	8 cut(s)	89, 261, 663, 819, 975, 1131, 1174, 1209
MbiI	CCGCTC	2 cut(s)	17, 23
MboI	GATC	8 cut(s)	87, 259, 661, 817, 973, 1129, 1172, 1207
MboII	GAAGA	6 cut(s)	74, 110, 515, 608, 715, 1188
MfeI	CAATTG	1 cut(s)	267
MflI	RGATCY	1 cut(s)	1172
MluCI	AATT	7 cut(s)	69, 267, 340, 402, 525, 857, 998
MlyI	GAGTC	2 cut(s)	500, 1163
MmeI	TCCRAC	6 cut(s)	303, 758, 863, 914, 934, 1359
MroI	TCCGGA	1 cut(s)	673
MroXI	GAANNNNTTC	1 cut(s)	1272
MseI	TTAA	4 cut(s)	212, 390, 693, 1023
MslI	CAYNNNNRTG	1 cut(s)	180
MspA1I	CMGCKG	2 cut(s)	587, 875
MspI	CCGG	3 cut(s)	96, 674, 1179
MspR9I	CCNGG	3 cut(s)	145, 1084, 1180
MunI	CAATTG	1 cut(s)	267
MvaI	CCWGG	2 cut(s)	145, 1084
MvnI	CGCG	1 cut(s)	78
MwoI	GCNNNNNNNGC	1 cut(s)	569
NciI	CCSGG	1 cut(s)	1180
NcoI	CCATGG	2 cut(s)	175, 894
NdeI	CATATG	1 cut(s)	772
NdeII	GATC	8 cut(s)	87, 259, 661, 817, 973, 1129, 1172, 1207
NlaIII	CATG	8 cut(s)	179, 233, 338, 386, 670, 806, 898, 1118
NlaIV	GGNNCC	4 cut(s)	100, 496, 626, 672
NmeAIII	GCCGAG	1 cut(s)	211
NmuCI	GTSAC	8 cut(s)	104, 314, 347, 433, 589, 851, 962, 1233
PciSI	GCTCTTC	1 cut(s)	123
PdmI	GAANNNNTTC	1 cut(s)	1272
PfeI	GAWTC	3 cut(s)	1121, 1193, 1331
PkrI	GCNGC	3 cut(s)	77, 565, 586
Ple19I	CGATCG	1 cut(s)	664
PleI	GAGTC	2 cut(s)	500, 1162
PpsI	GAGTC	2 cut(s)	500, 1162
Psp1406I	AACGTT	1 cut(s)	1137
Psp6I	CCWGG	2 cut(s)	143, 1082
PspFI	CCCAGC	2 cut(s)	621, 927
PspGI	CCWGG	2 cut(s)	143, 1082
PspN4I	GGNNCC	4 cut(s)	100, 496, 626, 672
PspPI	GGNCC	3 cut(s)	190, 625, 643
PstI	CTGCAG	1 cut(s)	586
PsuI	RGATCY	1 cut(s)	1172
PvuI	CGATCG	1 cut(s)	664
PvuII	CAGCTG	2 cut(s)	587, 875
RsaI	GTAC	4 cut(s)	48, 496, 516, 767
RsaNI	GTAC	4 cut(s)	47, 495, 515, 766
RseI	CAYNNNNRTG	1 cut(s)	180
SapI	GCTCTTC	1 cut(s)	123
SaqAI	TTAA	4 cut(s)	212, 390, 693, 1023
SatI	GCNGC	3 cut(s)	76, 564, 585
Sau3AI	GATC	8 cut(s)	87, 259, 661, 817, 973, 1129, 1172, 1207
Sau96I	GGNCC	3 cut(s)	190, 625, 643
ScaI	AGTACT	1 cut(s)	48
SchI	GAGTC	2 cut(s)	500, 1163
ScrFI	CCNGG	3 cut(s)	145, 1084, 1180
SfaNI	GCATC	3 cut(s)	172, 1295, 1306
SfcI	CTRYAG	2 cut(s)	582, 1215
SgrAI	CRCCGGYG	1 cut(s)	95
SinI	GGWCC	1 cut(s)	190
SmiMI	CAYNNNNRTG	1 cut(s)	180
SmlI	CTYRAG	1 cut(s)	847
SmoI	CTYRAG	1 cut(s)	847
Sse9I	AATT	7 cut(s)	69, 267, 340, 402, 525, 857, 998
SsiI	CCGC	7 cut(s)	17, 23, 29, 59, 76, 93, 411
SspMI	CTAG	3 cut(s)	345, 647, 839
StyD4I	CCNGG	3 cut(s)	143, 1082, 1178
StyI	CCWWGG	3 cut(s)	175, 646, 894
TaaI	ACNGT	3 cut(s)	980, 1273, 1353
TaiI	ACGT	2 cut(s)	1140, 1341
TaqI	TCGA	4 cut(s)	760, 972, 1152, 1276
TaqII	GACCGA	1 cut(s)	207
TasI	AATT	7 cut(s)	69, 267, 340, 402, 525, 857, 998
TatI	WGTACW	2 cut(s)	46, 765
TauI	GCSGC	1 cut(s)	78
TfiI	GAWTC	3 cut(s)	1121, 1193, 1331
Tru1I	TTAA	4 cut(s)	212, 390, 693, 1023
Tru9I	TTAA	4 cut(s)	212, 390, 693, 1023
TscAI	CASTG	3 cut(s)	438, 505, 983
TseFI	GTSAC	8 cut(s)	104, 314, 347, 433, 589, 851, 962, 1233
TseI	GCWGC	2 cut(s)	563, 584
Tsp45I	GTSAC	8 cut(s)	104, 314, 347, 433, 589, 851, 962, 1233
TspDTI	ATGAA	2 cut(s)	246, 1281
TspGWI	ACGGA	1 cut(s)	927
TspRI	CASTG	3 cut(s)	438, 505, 983
VpaK11BI	GGWCC	1 cut(s)	190
XapI	RAATTY	3 cut(s)	525, 857, 998
XmaJI	CCTAGG	1 cut(s)	646
XmnI	GAANNNNTTC	1 cut(s)	1272
XspI	CTAG	3 cut(s)	345, 647, 839
ZraI	GACGTC	1 cut(s)	1339
ZrmI	AGTACT	1 cut(s)	48

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.