Prupe.4G277200_v2.0.a1

ultraviolet-B receptor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
23163334 .. 23173446
10113 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G277200.1

Sequence Viewer

Length: 1329 bp
ATGGCAGAAGAGGGAGCCAGTGAAGTCAGTGGTGCTCCAATCCGCCGCGTCCTTCTCATCTCCGCTGGTGCCAGTCACTCTGTTGCTCTTCTTTCTGATAATGTTTTTTGCTCCTGGGGACGAGGAGAGGATGGGCAGTTAGGCCATGGTGACGCTGAAGATCGACTTTCACCGACACATTTGAGTGCATTGGATGGCCATGAAATAGTATCTGTTACTTGTGGAGCTGATCATACAATTGCTTACTCTGACTCACGTACACAAGCGTATAGTTGGGGATGGGGTGACTTTGGGAGGTTGGGTCATGGTAATTCCAGTGACTTGTTTACACCTCAGCCGATAAAGGCATTATATGGTCTGAGGATAAGGCAAATTGCTTGTGGGGACAGCCACTGTTTGGCAGTGACGATGGAAGGTGAGGTGCAAAGTTGGGGGCGGAATCAAAATGGTCAACTTGGTCTTGGCACCACAGAAGACTCTCTTGTGCCACAGAAGATTCAAGCGTTTCAGGGAATATCTGTCAAAATGGTTGCTGCTGGTGCTGAACATACGGCAGCTGTCACAGAAGATGGATCACTCTATGGATGGGGTTGGGGCCGATATGGAAACTTGGGCCTAGGTGACAGGAACGATCGCTTGGTTCCAGAGAAGGTTTCTATGGTTAATAGTGAGAAGATGGTTATGGTTGCGTGTGGATGGCGGCACACAATATCTGTTTCTTCATTGGGTCGATTATACACATATGGGTGGAGCAAATATGGTCAACTAGGACATGGGGATTTTGAGGATCACCTTGTTCCTCACAAGCTAGAAGCCTTGAGTAACAACTTTATTTGTGAGACAGCTGGCGGTTGGAGGCATACTATGGCACTCACATCTGATGGAAAACTGTATGGCTGGGGTTGGAATAAGTTTGGACAGGTTGGAGTTGGGGACAATATTGATCACTGTTCTCCTGTGCAAGTTAAATTTCCTCATGACCAGAAAGTAGTTCAAATAACATGTGGATGGAGACACACACTTGCTGTTACTGAAAGACAAAATGTGTTCTCCTGGGGGAGGGGTACAAATGGACAGCTTGGGCATGGAGAATCAATTGACCGGAATGTTCCAACAATTATAGAGTCTTTGAGTGTTGATGGATCTACCGGGCTACAGATAGAATCTTCAAAAGTTGATCCAGCAACAGGGAAAACTTGGGTGTCACCATCAGAGAGATATGCTGTTGTTCCAGATGAAACTGTCCGAGGCCAAACATCTGCGTCAGTCAAGGGTAATGGGAATGATGTAAGTGTTCCACAGTCCGACGTGAAACGCGTACGGTTTTGA

Protein Analysis

443

Amino Acids

47.74

Weight (kDa)

5.93

Isoelectric Point (pI)

32.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012331)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 68, 464
AccB7I CCANNNNNTGG 1 cut(s) 397
AccII CGCG 2 cut(s) 48, 1317
AciI CCGC 6 cut(s) 43, 46, 63, 436, 700, 849
AclWI GGATC 4 cut(s) 580, 795, 1150, 1172
AcoI YGGCCR 1 cut(s) 196
AcsI RAATTY 1 cut(s) 968
AcuI CTGAAG 1 cut(s) 177
AfaI GTAC 3 cut(s) 259, 1066, 1320
AfiI CCNNNNNNNGG 3 cut(s) 397, 1059, 1187
AflIII ACRYGT 2 cut(s) 1001, 1315
AgsI TTSAA 3 cut(s) 500, 995, 1170
AjiI CACGTC 1 cut(s) 1309
AjnI CCWGG 2 cut(s) 113, 1052
AjuI GAANNNNNNNTTGG 2 cut(s) 620, 652
AluBI AGCT 5 cut(s) 227, 557, 808, 845, 1078
AluI AGCT 5 cut(s) 227, 557, 808, 845, 1078
Alw21I GWGCWC 1 cut(s) 37
Alw26I GTCTC 2 cut(s) 833, 1006
AlwI GGATC 4 cut(s) 580, 795, 1150, 1172
AlwNI CAGNNNCTG 1 cut(s) 393
AoxI GGCC 5 cut(s) 142, 196, 595, 613, 1249
ApeKI GCWGC 2 cut(s) 533, 554
ApoI RAATTY 1 cut(s) 968
AspA2I CCTAGG 1 cut(s) 616
AspS9I GGNCC 2 cut(s) 595, 613
AsuC2I CCSGG 1 cut(s) 1150
AsuHPI GGTGA 7 cut(s) 161, 162, 296, 428, 632, 782, 1197
AvrII CCTAGG 1 cut(s) 616
BalI TGGCCA 1 cut(s) 198
BanI GGYRCC 2 cut(s) 68, 464
BbsI GAAGAC 1 cut(s) 480
Bbv12I GWGCWC 1 cut(s) 37
BbvCI CCTCAGC 1 cut(s) 333
BbvI GCAGC 2 cut(s) 520, 566
BceAI ACGGC 1 cut(s) 567
BciT130I CCWGG 2 cut(s) 115, 1054
BclI TGATCA 2 cut(s) 229, 943
BcnI CCSGG 1 cut(s) 1150
BcoDI GTCTC 2 cut(s) 833, 1006
BfaI CTAG 3 cut(s) 617, 767, 809
BfmI CTRYAG 1 cut(s) 1154
BisI GCNGC 4 cut(s) 46, 534, 555, 701
BlnI CCTAGG 1 cut(s) 616
BlsI GCNGC 4 cut(s) 47, 535, 556, 702
Bme1390I CCNGG 3 cut(s) 115, 1054, 1150
BmgBI CACGTC 1 cut(s) 1309
BmgT120I GGNCC 2 cut(s) 595, 613
BmiI GGNNCC 5 cut(s) 16, 70, 466, 596, 642
BmrFI CCNGG 3 cut(s) 115, 1054, 1150
BpiI GAAGAC 1 cut(s) 480
Bpu10I CCTNAGC 1 cut(s) 333
BpuEI CTTGAG 1 cut(s) 838
BpuMI CCSGG 1 cut(s) 1150
BsaAI YACGTR 1 cut(s) 257
BsaJI CCNNGG 5 cut(s) 114, 145, 616, 1053, 1246
BsaWI WCCGGW 1 cut(s) 1101
BsaXI ACNNNNNCTCC 2 cut(s) 286, 316
Bsc4I CCNNNNNNNGG 3 cut(s) 397, 1059, 1187
Bse1I ACTGG 3 cut(s) 18, 72, 315
BseBI CCWGG 2 cut(s) 115, 1054
BseDI CCNNGG 5 cut(s) 114, 145, 616, 1053, 1246
BseGI GGATG 6 cut(s) 136, 199, 284, 590, 701, 1013
BseLI CCNNNNNNNGG 3 cut(s) 397, 1059, 1187
BseMII CTCAG 2 cut(s) 347, 350
BseNI ACTGG 3 cut(s) 18, 72, 315
BseRI GAGGAG 1 cut(s) 138
BseXI GCAGC 2 cut(s) 520, 566
BseYI CCCAGC 1 cut(s) 897
Bsh1236I CGCG 2 cut(s) 48, 1317
Bsh1285I CGRYCG 1 cut(s) 634
BshFI GGCC 5 cut(s) 144, 198, 597, 615, 1251
BshNI GGYRCC 2 cut(s) 68, 464
BsiEI CGRYCG 1 cut(s) 634
BsiHKAI GWGCWC 1 cut(s) 37
BsiSI CCGG 2 cut(s) 1102, 1149
BsiWI CGTACG 1 cut(s) 1318
BslFI GGGAC 3 cut(s) 132, 398, 947
BslI CCNNNNNNNGG 3 cut(s) 397, 1059, 1187
BsmAI GTCTC 2 cut(s) 833, 1006
BsmFI GGGAC 3 cut(s) 132, 398, 947
BsnI GGCC 5 cut(s) 144, 198, 597, 615, 1251
Bsp1286I GDGCHC 1 cut(s) 37
Bsp143I GATC 8 cut(s) 160, 229, 572, 631, 787, 943, 1142, 1177
Bsp19I CCATGG 1 cut(s) 145
BspACI CCGC 6 cut(s) 43, 46, 63, 436, 700, 849
BspANI GGCC 5 cut(s) 144, 198, 597, 615, 1251
BspCNI CTCAG 2 cut(s) 346, 351
BspFNI CGCG 2 cut(s) 48, 1317
BspHI TCATGA 1 cut(s) 976
BspLI GGNNCC 5 cut(s) 16, 70, 466, 596, 642
BspPI GGATC 4 cut(s) 580, 795, 1150, 1172
BspQI GCTCTTC 1 cut(s) 93
BspT107I GGYRCC 2 cut(s) 68, 464
BsrI ACTGG 3 cut(s) 18, 72, 315
BssECI CCNNGG 5 cut(s) 114, 145, 616, 1053, 1246
BssMI GATC 8 cut(s) 160, 229, 572, 631, 787, 943, 1142, 1177
BssT1I CCWWGG 2 cut(s) 145, 616
Bst2UI CCWGG 2 cut(s) 115, 1054
Bst4CI ACNGT 6 cut(s) 395, 891, 950, 1243, 1302, 1323
Bst6I CTCTTC 2 cut(s) 3, 93
BstBAI YACGTR 1 cut(s) 257
BstC8I GCNNGC 1 cut(s) 847
BstDEI CTNAG 2 cut(s) 333, 359
BstDSI CCRYGG 1 cut(s) 145
BstENI CCTNNNNNAGG 1 cut(s) 1057
BstF5I GGATG 6 cut(s) 136, 199, 284, 590, 701, 1013
BstFNI CGCG 2 cut(s) 48, 1317
BstKTI GATC 8 cut(s) 163, 232, 575, 634, 790, 946, 1145, 1180
BstMAI GTCTC 2 cut(s) 833, 1006
BstMBI GATC 8 cut(s) 160, 229, 572, 631, 787, 943, 1142, 1177
BstMCI CGRYCG 1 cut(s) 634
BstMWI GCNNNNNNNGC 1 cut(s) 539
BstNI CCWGG 2 cut(s) 115, 1054
BstNSI RCATGY 1 cut(s) 1005
BstSCI CCNGG 3 cut(s) 113, 1052, 1148
BstSFI CTRYAG 1 cut(s) 1154
BstUI CGCG 2 cut(s) 48, 1317
BstV1I GCAGC 2 cut(s) 520, 566
BstV2I GAAGAC 1 cut(s) 480
BstX2I RGATCY 1 cut(s) 1142
BstYI RGATCY 1 cut(s) 1142
BsuRI GGCC 5 cut(s) 144, 198, 597, 615, 1251
BtgI CCRYGG 1 cut(s) 145
BtrI CACGTC 1 cut(s) 1309
BtsCI GGATG 6 cut(s) 136, 199, 284, 590, 701, 1013
BtsI GCAGTG 1 cut(s) 408
BtsIMutI CAGTG 6 cut(s) 25, 34, 322, 391, 408, 946
Cac8I GCNNGC 1 cut(s) 847
CaiI CAGNNNCTG 1 cut(s) 393
CciI TCATGA 1 cut(s) 976
Cfr13I GGNCC 2 cut(s) 595, 613
CseI GACGC 3 cut(s) 37, 161, 1251
Csp6I GTAC 3 cut(s) 258, 1065, 1319
CviAII CATG 7 cut(s) 146, 200, 305, 773, 977, 1002, 1085
CviQI GTAC 3 cut(s) 258, 1065, 1319
DdeI CTNAG 2 cut(s) 333, 359
DpnI GATC 8 cut(s) 162, 231, 574, 633, 789, 945, 1144, 1179
DpnII GATC 8 cut(s) 160, 229, 572, 631, 787, 943, 1142, 1177
EaeI YGGCCR 1 cut(s) 196
Eam1104I CTCTTC 2 cut(s) 3, 93
EarI CTCTTC 2 cut(s) 3, 93
EciI GGCGGA 2 cut(s) 32, 451
Eco130I CCWWGG 2 cut(s) 145, 616
Eco57I CTGAAG 1 cut(s) 177
EcoNI CCTNNNNNAGG 1 cut(s) 1057
EcoRII CCWGG 2 cut(s) 113, 1052
EcoT14I CCWWGG 2 cut(s) 145, 616
ErhI CCWWGG 2 cut(s) 145, 616
FaeI CATG 7 cut(s) 149, 203, 308, 776, 980, 1005, 1088
FalI AAGNNNNNCTT 4 cut(s) 150, 182, 465, 497
FaqI GGGAC 3 cut(s) 132, 398, 947
FatI CATG 7 cut(s) 145, 199, 304, 772, 976, 1001, 1084
FauNDI CATATG 1 cut(s) 742
FbaI TGATCA 2 cut(s) 229, 943
Fnu4HI GCNGC 4 cut(s) 46, 534, 555, 701
FokI GGATG 6 cut(s) 143, 206, 291, 597, 708, 1020
Fsp4HI GCNGC 4 cut(s) 46, 534, 555, 701
FspBI CTAG 3 cut(s) 617, 767, 809
GluI GCNGC 4 cut(s) 46, 534, 555, 701
GsaI CCCAGC 1 cut(s) 901
HaeIII GGCC 5 cut(s) 144, 198, 597, 615, 1251
HapII CCGG 2 cut(s) 1102, 1149
HgaI GACGC 3 cut(s) 37, 161, 1251
Hin1II CATG 7 cut(s) 149, 203, 308, 776, 980, 1005, 1088
HincII GTYRAC 2 cut(s) 452, 764
HindII GTYRAC 2 cut(s) 452, 764
HinfI GANTC 7 cut(s) 251, 439, 476, 496, 1091, 1124, 1163
HpaII CCGG 2 cut(s) 1102, 1149
HphI GGTGA 7 cut(s) 161, 162, 296, 428, 632, 782, 1197
Hpy166II GTNNAC 4 cut(s) 260, 327, 452, 764
Hpy188I TCNGA 7 cut(s) 97, 250, 360, 880, 1213, 1247, 1306
Hpy188III TCNNGA 3 cut(s) 644, 977, 1232
Hpy8I GTNNAC 4 cut(s) 260, 327, 452, 764
Hpy99I CGWCG 1 cut(s) 1310
HpyAV CCTTC 3 cut(s) 62, 407, 643
HpyCH4III ACNGT 6 cut(s) 395, 891, 950, 1243, 1302, 1323
HpyCH4IV ACGT 2 cut(s) 256, 1308
HpyCH4V TGCA 3 cut(s) 188, 424, 961
HpyF10VI GCNNNNNNNGC 1 cut(s) 539
HpyF3I CTNAG 2 cut(s) 333, 359
HpySE526I ACGT 2 cut(s) 256, 1308
Hsp92II CATG 7 cut(s) 149, 203, 308, 776, 980, 1005, 1088
Ksp22I TGATCA 2 cut(s) 229, 943
Kzo9I GATC 8 cut(s) 160, 229, 572, 631, 787, 943, 1142, 1177
LguI GCTCTTC 1 cut(s) 93
LmnI GCTCC 5 cut(s) 14, 40, 116, 224, 750
Lsp1109I GCAGC 2 cut(s) 520, 566
MaeI CTAG 3 cut(s) 617, 767, 809
MaeII ACGT 2 cut(s) 256, 1308
MalI GATC 8 cut(s) 162, 231, 574, 633, 789, 945, 1144, 1179
MboI GATC 8 cut(s) 160, 229, 572, 631, 787, 943, 1142, 1177
MboII GAAGA 9 cut(s) 20, 80, 170, 485, 505, 578, 685, 711, 1158
MfeI CAATTG 2 cut(s) 237, 1095
MflI RGATCY 1 cut(s) 1142
MhlI GDGCHC 1 cut(s) 37
MlsI TGGCCA 1 cut(s) 198
MluCI AATT 6 cut(s) 237, 310, 372, 968, 1095, 1116
MluI ACGCGT 1 cut(s) 1315
MluNI TGGCCA 1 cut(s) 198
MlyI GAGTC 3 cut(s) 245, 470, 1133
MmeI TCCRAC 5 cut(s) 833, 884, 904, 1136, 1329
Mox20I TGGCCA 1 cut(s) 198
MscI TGGCCA 1 cut(s) 198
MseI TTAA 2 cut(s) 663, 966
MslI CAYNNNNRTG 3 cut(s) 183, 745, 1006
Msp20I TGGCCA 1 cut(s) 198
MspA1I CMGCKG 3 cut(s) 65, 557, 845
MspI CCGG 2 cut(s) 1102, 1149
MspR9I CCNGG 3 cut(s) 115, 1054, 1150
MunI CAATTG 2 cut(s) 237, 1095
MvaI CCWGG 2 cut(s) 115, 1054
MvnI CGCG 2 cut(s) 48, 1317
MwoI GCNNNNNNNGC 1 cut(s) 539
NciI CCSGG 1 cut(s) 1150
NcoI CCATGG 1 cut(s) 145
NdeI CATATG 1 cut(s) 742
NdeII GATC 8 cut(s) 160, 229, 572, 631, 787, 943, 1142, 1177
NlaIII CATG 7 cut(s) 149, 203, 308, 776, 980, 1005, 1088
NlaIV GGNNCC 5 cut(s) 16, 70, 466, 596, 642
NmuCI GTSAC 8 cut(s) 74, 149, 284, 317, 403, 559, 620, 1203
NspI RCATGY 1 cut(s) 1005
PagI TCATGA 1 cut(s) 976
PciI ACATGT 1 cut(s) 1001
PciSI GCTCTTC 1 cut(s) 93
PcsI WCGNNNNNNNCGW 1 cut(s) 1314
PfeI GAWTC 4 cut(s) 439, 496, 1091, 1163
Pfl23II CGTACG 1 cut(s) 1318
PflMI CCANNNNNTGG 1 cut(s) 397
PkrI GCNGC 4 cut(s) 47, 535, 556, 702
Ple19I CGATCG 1 cut(s) 634
PleI GAGTC 3 cut(s) 245, 470, 1132
PpsI GAGTC 3 cut(s) 245, 470, 1132
Ppu21I YACGTR 1 cut(s) 257
PscI ACATGT 1 cut(s) 1001
Psp6I CCWGG 2 cut(s) 113, 1052
PspFI CCCAGC 1 cut(s) 897
PspGI CCWGG 2 cut(s) 113, 1052
PspLI CGTACG 1 cut(s) 1318
PspN4I GGNNCC 5 cut(s) 16, 70, 466, 596, 642
PspPI GGNCC 2 cut(s) 595, 613
PstNI CAGNNNCTG 1 cut(s) 393
PsuI RGATCY 1 cut(s) 1142
PvuI CGATCG 1 cut(s) 634
PvuII CAGCTG 2 cut(s) 557, 845
RsaI GTAC 3 cut(s) 259, 1066, 1320
RsaNI GTAC 3 cut(s) 258, 1065, 1319
RseI CAYNNNNRTG 3 cut(s) 183, 745, 1006
SapI GCTCTTC 1 cut(s) 93
SaqAI TTAA 2 cut(s) 663, 966
SatI GCNGC 4 cut(s) 46, 534, 555, 701
Sau3AI GATC 8 cut(s) 160, 229, 572, 631, 787, 943, 1142, 1177
Sau96I GGNCC 2 cut(s) 595, 613
SchI GAGTC 3 cut(s) 245, 470, 1133
ScrFI CCNGG 3 cut(s) 115, 1054, 1150
SduI GDGCHC 1 cut(s) 37
SfcI CTRYAG 1 cut(s) 1154
SmiMI CAYNNNNRTG 3 cut(s) 183, 745, 1006
SmlI CTYRAG 1 cut(s) 817
SmoI CTYRAG 1 cut(s) 817
Sse9I AATT 6 cut(s) 237, 310, 372, 968, 1095, 1116
SsiI CCGC 6 cut(s) 43, 46, 63, 436, 700, 849
SspI AATATT 1 cut(s) 940
SspMI CTAG 3 cut(s) 617, 767, 809
StyD4I CCNGG 3 cut(s) 113, 1052, 1148
StyI CCWWGG 2 cut(s) 145, 616
TaaI ACNGT 6 cut(s) 395, 891, 950, 1243, 1302, 1323
TaiI ACGT 2 cut(s) 259, 1311
TaqI TCGA 2 cut(s) 163, 730
TasI AATT 6 cut(s) 237, 310, 372, 968, 1095, 1116
TauI GCSGC 2 cut(s) 48, 703
TfiI GAWTC 4 cut(s) 439, 496, 1091, 1163
Tru1I TTAA 2 cut(s) 663, 966
Tru9I TTAA 2 cut(s) 663, 966
TscAI CASTG 6 cut(s) 25, 34, 322, 398, 408, 953
TseFI GTSAC 8 cut(s) 74, 149, 284, 317, 403, 559, 620, 1203
TseI GCWGC 2 cut(s) 533, 554
Tsp45I GTSAC 8 cut(s) 74, 149, 284, 317, 403, 559, 620, 1203
TspDTI ATGAA 3 cut(s) 216, 711, 1251
TspRI CASTG 6 cut(s) 25, 34, 322, 398, 408, 953
Van91I CCANNNNNTGG 1 cut(s) 397
XagI CCTNNNNNAGG 1 cut(s) 1057
XapI RAATTY 1 cut(s) 968
XceI RCATGY 1 cut(s) 1005
XmaJI CCTAGG 1 cut(s) 616
XspI CTAG 3 cut(s) 617, 767, 809
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.