Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0003177

Physical Location & Seq

Genomic Coordinates Forward (+)

14412803 .. 14418040

Gene Structure 5238 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1181800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1785 bp

ATGGGGGAAGGCGACGGGGCTGATTTGGCCCCGAAGAAGGCTCAATCGGATGCGGCAGCGGGCACTGCCACGGCGTCGTCCTCGTCCTCGATGAACGATGTCCCGGCGAAGAAGCTTGCGAGGCAGCTCGATTTCACGGGGGTTGCTAGCGCTCCGGCGAGTGTGGCGGTGCCGGAGCTCCCTAAGCCACCACTGCCGACCGAGGCGGTGCCGCCGAGTCTGCCAAATCCCCCCGTGGTGTCCATGCCAGTGCCGGTGTTGGTGCCGCAGCAGCCGCATACACTGAAGCTCGTGAAACCAGAATCCCCAAAATCGAGACCAAGACCCAATGTTGATGCAAAAGATGGTACTCCTAAGAAGCAAAAACAGTGTAACTGTAAACACTCTCGCTGCTTAAAGCTGTATTGTGAGTGTTTTGCATCTGGAATTTACTGTGACGGGTGCAACTGCGTAAACTGTTGCAATAATGTTGAAAATGAAGGTGCTAGGAATGATGCAATTGAAGCTACTTTGGAGCGTAATCCAAATGCATTCAGGCCAAAAATTGCGAGTAGCCCTCATGGAGCAAAGGATACTCGGGAGGAAGCAGGAGAGGTTTTGATTTTGGGGAAGCACAACAAAGGATGCCATTGCAAGAAATCAGGGTGCCTGAAGAAATACTGTGAATGCTTCCAAGCCAACATTCTCTGCTCGGAGAACTGCAAGTGCATGGACTGCAAGAACTTTGAAGGAAGTGAAGAGAGACAAGCACTATTCCATGGAGACCATGGCAACAACATGGTATATCTTCAACAGGCAGCAAATGCTGCCATTACTGGAGCTATTGGATCCTCTGGCTATGCATCATCACCCCCAGTATCCAAAAAAAGAAGAGGTCAGGAGTTCTTTGGACCAACAGCAAAGGATCCATCAATACACCGGATCGGACAGTTTCAACAGGGAAACAATATCAGAGCCCCTGCACCCTCTCCGCAGTCTTCAGTCCCTGTTAATCGCCTTGGTGGTACTGCAGGATTAGGCCCTTCTAAGTTTACATACAGGTCTCTCCTAGCAGACATCATCCAACCACAGGACTTGAAGGAACTCTGTTCAGTTTTGGTTGTAGTAGCAGAAGAAGCTGCAAAGACACTTGCAGACCAAAGAAATACAGCAGAGAAGCCGACAGAAACTTCCCTTGCGTCAACAACACAAGACATGTTGCATAGCCAAAAGGAATCTGATGCTCAGAATGCTGTGGCTGATGATCGTTCTAGTGCAAATGACACTGATAAAATCAGCCCTGAAGATTCCAATTTGGACAGTGCTGATGTAACGAGGGGGAGGCCGATGTCTCCTGGAACTTTGGCATTGATGTGTGATGAACAAGATACAATGTTCATGTCAGCGGCTTCTCCTAATGGGTTAATGGGGGATGGTAACACATCTTCACAGTTGCCTAATGGACAAGGAATGACAGAAGTCTACGCAGAACAGGAAAGGATTGTCTTAATGAAATTCCGGGACTGTCTTAATAGGCTCATCACTTTCGGGGAAATAAAAGAAACAAAGTGCTCATCTTTAGCCAGAAGGGAAGCGGAAACTCAAAAAGACCAACACAGCAATAGCAGTACAAACGCAAGAATAGATTCGTGGAATCCGCAGGGGCCAATTAGCAATGGTGTTGCAAGAACTGCTGTTTCACTCGCACCCAAGACAACGACATCACAGACGGTTACTGCAGCAGTCTCAGCCCTCAGTAAAACTCCCTCCCATCCGGAAAACAGAGATGGGAGACCAAAAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04218 map04218

Pfam Domains

Protein Families

TCR

Protein Analysis

595

Amino Acids

63.35

Weight (kDa)

7.72

Isoelectric Point (pI)

52.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCR	PF03638	121 - 156	5.8e-10	Tesmin/TSO1-like CXC domain, cysteine-rich domain
TCR	PF03638	207 - 241	2.3e-12	Tesmin/TSO1-like CXC domain, cysteine-rich domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003177)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20110 AT2G20110 AT2G20110 AT4G29000
fragaria_vesca	FvH4_1g04340 FvH4_1g04340 FvH4_1g04340 FvH4_1g04340 FvH4_1g04340 FvH4_1g04340 FvH4_1g04340 FvH4_1g04340 FvH4_1g04340 FvH4_1g04340 FvH4_1g04340
malus_domestica	MD02G1043000.v1.1 MD15G1181800.v1.1
prunus_persica	Prupe.7G233800_v2.0.a1 Prupe.7G233800_v2.0.a1 Prupe.7G233800_v2.0.a1 Prupe.7G233800_v2.0.a1 Prupe.7G233800_v2.0.a1
pyrus_communis	pycom02g03580 pycom02g03590 pycom15g16400
rosa_chinensis	RchiOBHm_Chr2g0089991
rosa_laevigata	RLG00000016067
rosa_multiflora	Rmu_sc0000226.1_g000019
rosa_roxburghii	Rroxscaffold_2G00151480
rosa_rugosa	Rorug02G0004300 Rorug02G0004400 Rorug02G0004500
rosa_samantha	Rh2AG049700 Rh2BG048400 Rh2CG050600 Rh2DG049900
rosa_wichuraiana	Rw2G004080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	4 cut(s)	169, 208, 262, 645
AccI	GTMKAC	1 cut(s)	1461
AccIII	TCCGGA	1 cut(s)	1753
AclWI	GGATC	5 cut(s)	822, 835, 899, 912, 929
AcsI	RAATTY	2 cut(s)	426, 1493
AcuI	CTGAAG	4 cut(s)	305, 671, 963, 1302
AcyI	GRCGYC	1 cut(s)	74
AfaI	GTAC	3 cut(s)	349, 1006, 1609
AfeI	AGCGCT	1 cut(s)	151
AfiI	CCNNNNNNNGG	2 cut(s)	37, 1069
AflIII	ACRYGT	1 cut(s)	1194
AgsI	TTSAA	6 cut(s)	473, 503, 728, 791, 935, 1078
AjnI	CCWGG	1 cut(s)	1333
AjuI	GAANNNNNNNTTGG	2 cut(s)	666, 698
AluBI	AGCT	9 cut(s)	115, 127, 178, 289, 400, 506, 821, 1118, 1781
AluI	AGCT	9 cut(s)	115, 127, 178, 289, 400, 506, 821, 1118, 1781
Alw21I	GWGCWC	2 cut(s)	180, 1553
Alw26I	GTCTC	7 cut(s)	310, 736, 756, 1047, 1335, 1729, 1765
AlwI	GGATC	5 cut(s)	822, 835, 899, 912, 929
AlwNI	CAGNNNCTG	1 cut(s)	986
Ama87I	CYCGRG	1 cut(s)	576
Aor13HI	TCCGGA	1 cut(s)	1753
Aor51HI	AGCGCT	1 cut(s)	151
AoxI	GGCC	5 cut(s)	27, 536, 1018, 1322, 1643
ApeKI	GCWGC	9 cut(s)	56, 124, 268, 271, 390, 797, 806, 1118, 1718
ApoI	RAATTY	2 cut(s)	426, 1493
Asp700I	GAANNNNTTC	1 cut(s)	1624
AspLEI	GCGC	1 cut(s)	152
AspS9I	GGNCC	4 cut(s)	28, 890, 1019, 1643
AsuC2I	CCSGG	2 cut(s)	104, 1499
AsuHPI	GGTGA	1 cut(s)	840
AsuNHI	GCTAGC	1 cut(s)	146
AvaI	CYCGRG	1 cut(s)	576
AvaII	GGWCC	1 cut(s)	890
BaeGI	GKGCMC	1 cut(s)	65
BamHI	GGATCC	2 cut(s)	827, 904
BanI	GGYRCC	4 cut(s)	169, 208, 262, 645
BanII	GRGCYC	2 cut(s)	180, 958
BarI	GAAGNNNNNNTAC	2 cut(s)	1408, 1440
BauI	CACGAG	1 cut(s)	290
BbsI	GAAGAC	1 cut(s)	969
Bbv12I	GWGCWC	2 cut(s)	180, 1553
BbvI	GCAGC	9 cut(s)	68, 136, 280, 283, 377, 793, 809, 1105, 1730
BccI	CCATC	5 cut(s)	338, 916, 1406, 1758, 1760
BceAI	ACGGC	1 cut(s)	87
BciT130I	CCWGG	1 cut(s)	1335
BciVI	GTATCC	2 cut(s)	565, 868
BcnI	CCSGG	2 cut(s)	104, 1499
BcoDI	GTCTC	7 cut(s)	310, 736, 756, 1047, 1335, 1729, 1765
BfaI	CTAG	4 cut(s)	147, 486, 1049, 1251
BfmI	CTRYAG	2 cut(s)	1008, 1716
BfoI	RGCGCY	1 cut(s)	153
BfuI	GTATCC	2 cut(s)	565, 868
Bme1390I	CCNGG	3 cut(s)	104, 1335, 1499
Bme18I	GGWCC	1 cut(s)	890
BmeT110I	CYCGRG	1 cut(s)	576
BmgT120I	GGNCC	4 cut(s)	28, 890, 1019, 1643
BmiI	GGNNCC	8 cut(s)	30, 171, 210, 264, 647, 829, 906, 1644
BmrFI	CCNGG	3 cut(s)	104, 1335, 1499
BmrI	ACTGGG	1 cut(s)	848
BmsI	GCATC	7 cut(s)	40, 325, 428, 484, 614, 851, 1210
BmtI	GCTAGC	1 cut(s)	150
BmuI	ACTGGG	1 cut(s)	848
BoxI	GACNNNNGTC	1 cut(s)	1457
BpiI	GAAGAC	1 cut(s)	969
BplI	GAGNNNNNCTC	2 cut(s)	541, 573
BpmI	CTGGAG	1 cut(s)	837
Bpu10I	CCTNAGC	1 cut(s)	183
BpuMI	CCSGG	2 cut(s)	104, 1499
BsaHI	GRCGYC	1 cut(s)	74
BsaI	GGTCTC	4 cut(s)	310, 756, 1047, 1765
BsaJI	CCNNGG	6 cut(s)	69, 201, 234, 757, 766, 997
BsaWI	WCCGGW	2 cut(s)	918, 1753
Bsc4I	CCNNNNNNNGG	2 cut(s)	37, 1069
Bse118I	RCCGGY	1 cut(s)	253
Bse1I	ACTGG	3 cut(s)	248, 820, 854
Bse3DI	GCAATG	2 cut(s)	628, 1660
BseAI	TCCGGA	1 cut(s)	1753
BseBI	CCWGG	1 cut(s)	1335
BseDI	CCNNGG	6 cut(s)	69, 201, 234, 757, 766, 997
BseGI	GGATG	5 cut(s)	55, 629, 1059, 1417, 1750
BseLI	CCNNNNNNNGG	2 cut(s)	37, 1069
BseMI	GCAATG	2 cut(s)	628, 1660
BseMII	CTCAG	3 cut(s)	1238, 1740, 1747
BseNI	ACTGG	3 cut(s)	248, 820, 854
BseSI	GKGCMC	1 cut(s)	65
BseXI	GCAGC	9 cut(s)	68, 136, 280, 283, 377, 793, 809, 1105, 1730
BsgI	GTGCAG	1 cut(s)	945
Bsh1285I	CGRYCG	1 cut(s)	201
BshFI	GGCC	5 cut(s)	29, 538, 1020, 1324, 1645
BshNI	GGYRCC	4 cut(s)	169, 208, 262, 645
BsiEI	CGRYCG	1 cut(s)	201
BsiHKAI	GWGCWC	2 cut(s)	180, 1553
BsiHKCI	CYCGRG	1 cut(s)	576
BsiSI	CCGG	7 cut(s)	104, 155, 173, 254, 919, 1498, 1754
BslFI	GGGAC	3 cut(s)	86, 968, 1514
BslI	CCNNNNNNNGG	2 cut(s)	37, 1069
BsmAI	GTCTC	7 cut(s)	310, 736, 756, 1047, 1335, 1729, 1765
BsmFI	GGGAC	3 cut(s)	86, 968, 1514
BsmI	GAATGC	3 cut(s)	530, 671, 1234
BsnI	GGCC	5 cut(s)	29, 538, 1020, 1324, 1645
Bso31I	GGTCTC	4 cut(s)	310, 756, 1047, 1765
BsoBI	CYCGRG	1 cut(s)	576
Bsp1286I	GDGCHC	4 cut(s)	65, 180, 958, 1553
Bsp13I	TCCGGA	1 cut(s)	1753
Bsp143I	GATC	4 cut(s)	827, 904, 921, 1243
Bsp19I	CCATGG	2 cut(s)	757, 766
BspANI	GGCC	5 cut(s)	29, 538, 1020, 1324, 1645
BspCNI	CTCAG	3 cut(s)	1237, 1739, 1746
BspEI	TCCGGA	1 cut(s)	1753
BspLI	GGNNCC	8 cut(s)	30, 171, 210, 264, 647, 829, 906, 1644
BspMAI	CTGCAG	2 cut(s)	1012, 1720
BspOI	GCTAGC	1 cut(s)	150
BspPI	GGATC	5 cut(s)	822, 835, 899, 912, 929
BspT107I	GGYRCC	4 cut(s)	169, 208, 262, 645
BspTNI	GGTCTC	4 cut(s)	310, 756, 1047, 1765
BsrDI	GCAATG	2 cut(s)	628, 1660
BsrFI	RCCGGY	1 cut(s)	253
BsrI	ACTGG	3 cut(s)	248, 820, 854
BssAI	RCCGGY	1 cut(s)	253
BssECI	CCNNGG	6 cut(s)	69, 201, 234, 757, 766, 997
BssMI	GATC	4 cut(s)	827, 904, 921, 1243
BssNI	GRCGYC	1 cut(s)	74
BssSI	CACGAG	1 cut(s)	290
BssT1I	CCWWGG	3 cut(s)	757, 766, 997
Bst2BI	CACGAG	1 cut(s)	290
Bst2UI	CCWGG	1 cut(s)	1335
Bst6I	CTCTTC	2 cut(s)	732, 865
BstACI	GRCGYC	1 cut(s)	74
BstAPI	GCANNNNNTGC	4 cut(s)	714, 803, 806, 1670
BstC8I	GCNNGC	3 cut(s)	61, 117, 148
BstDEI	CTNAG	6 cut(s)	183, 354, 1026, 1224, 1726, 1733
BstDSI	CCRYGG	4 cut(s)	69, 234, 757, 766
BstF5I	GGATG	5 cut(s)	55, 629, 1059, 1417, 1750
BstH2I	RGCGCY	1 cut(s)	153
BstHHI	GCGC	1 cut(s)	152
BstKTI	GATC	4 cut(s)	830, 907, 924, 1246
BstMAI	GTCTC	7 cut(s)	310, 736, 756, 1047, 1335, 1729, 1765
BstMBI	GATC	4 cut(s)	827, 904, 921, 1243
BstMCI	CGRYCG	1 cut(s)	201
BstNI	CCWGG	1 cut(s)	1335
BstNSI	RCATGY	1 cut(s)	1198
BstPAI	GACNNNNGTC	1 cut(s)	1457
BstSCI	CCNGG	3 cut(s)	102, 1333, 1497
BstSFI	CTRYAG	2 cut(s)	1008, 1716
BstSLI	GKGCMC	1 cut(s)	65
BstV1I	GCAGC	9 cut(s)	68, 136, 280, 283, 377, 793, 809, 1105, 1730
BstV2I	GAAGAC	1 cut(s)	969
BstX2I	RGATCY	2 cut(s)	827, 904
BstYI	RGATCY	2 cut(s)	827, 904
BsuI	GTATCC	2 cut(s)	565, 868
BsuRI	GGCC	5 cut(s)	29, 538, 1020, 1324, 1645
BtgI	CCRYGG	4 cut(s)	69, 234, 757, 766
BtsCI	GGATG	5 cut(s)	55, 629, 1059, 1417, 1750
BtsI	GCAGTG	2 cut(s)	63, 191
BtsIMutI	CAGTG	7 cut(s)	63, 191, 255, 281, 374, 1263, 1306
Cac8I	GCNNGC	3 cut(s)	61, 117, 148
CaiI	CAGNNNCTG	1 cut(s)	986
CfoI	GCGC	1 cut(s)	152
Cfr10I	RCCGGY	1 cut(s)	253
Cfr13I	GGNCC	4 cut(s)	28, 890, 1019, 1643
CseI	GACGC	2 cut(s)	63, 1167
Csp6I	GTAC	3 cut(s)	348, 1005, 1608
CspCI	CAANNNNNGTGG	2 cut(s)	1056, 1091
CviAII	CATG	8 cut(s)	244, 560, 709, 758, 767, 778, 1195, 1378
CviQI	GTAC	3 cut(s)	348, 1005, 1608
DdeI	CTNAG	6 cut(s)	183, 354, 1026, 1224, 1726, 1733
DpnI	GATC	4 cut(s)	829, 906, 923, 1245
DpnII	GATC	4 cut(s)	827, 904, 921, 1243
Eam1104I	CTCTTC	2 cut(s)	732, 865
EarI	CTCTTC	2 cut(s)	732, 865
Ecl136II	GAGCTC	1 cut(s)	178
Eco130I	CCWWGG	3 cut(s)	757, 766, 997
Eco24I	GRGCYC	2 cut(s)	180, 958
Eco31I	GGTCTC	4 cut(s)	310, 756, 1047, 1765
Eco47I	GGWCC	1 cut(s)	890
Eco47III	AGCGCT	1 cut(s)	151
Eco53kI	GAGCTC	1 cut(s)	178
Eco57I	CTGAAG	4 cut(s)	305, 671, 963, 1302
Eco88I	CYCGRG	1 cut(s)	576
EcoICRI	GAGCTC	1 cut(s)	178
EcoO109I	RGGNCCY	1 cut(s)	1019
EcoRII	CCWGG	1 cut(s)	1333
EcoT14I	CCWWGG	3 cut(s)	757, 766, 997
EcoT22I	ATGCAT	2 cut(s)	532, 844
EcoT38I	GRGCYC	2 cut(s)	180, 958
ErhI	CCWWGG	3 cut(s)	757, 766, 997
FaeI	CATG	8 cut(s)	247, 563, 712, 761, 770, 781, 1198, 1381
FaqI	GGGAC	3 cut(s)	86, 968, 1514
FatI	CATG	8 cut(s)	243, 559, 708, 757, 766, 777, 1194, 1377
FauI	CCCGC	1 cut(s)	52
FblI	GTMKAC	1 cut(s)	1461
FokI	GGATG	5 cut(s)	62, 636, 1046, 1424, 1737
FriOI	GRGCYC	2 cut(s)	180, 958
FspBI	CTAG	4 cut(s)	147, 486, 1049, 1251
GlaI	GCGC	1 cut(s)	151
GsuI	CTGGAG	1 cut(s)	837
HaeII	RGCGCY	1 cut(s)	153
HaeIII	GGCC	5 cut(s)	29, 538, 1020, 1324, 1645
HapII	CCGG	7 cut(s)	104, 155, 173, 254, 919, 1498, 1754
HgaI	GACGC	2 cut(s)	63, 1167
HhaI	GCGC	1 cut(s)	152
Hin1I	GRCGYC	1 cut(s)	74
Hin1II	CATG	8 cut(s)	247, 563, 712, 761, 770, 781, 1198, 1381
Hin6I	GCGC	1 cut(s)	150
HinP1I	GCGC	1 cut(s)	150
HincII	GTYRAC	1 cut(s)	1182
HindII	GTYRAC	1 cut(s)	1182
HindIII	AAGCTT	2 cut(s)	113, 1779
HinfI	GANTC	6 cut(s)	217, 302, 1214, 1286, 1625, 1633
HpaII	CCGG	7 cut(s)	104, 155, 173, 254, 919, 1498, 1754
HphI	GGTGA	1 cut(s)	840
Hpy166II	GTNNAC	5 cut(s)	380, 454, 1032, 1182, 1462
Hpy188I	TCNGA	6 cut(s)	49, 694, 926, 953, 1219, 1227
Hpy188III	TCNNGA	6 cut(s)	292, 315, 423, 578, 878, 1754
Hpy8I	GTNNAC	5 cut(s)	380, 454, 1032, 1182, 1462
Hpy99I	CGWCG	2 cut(s)	17, 79
HpyAV	CCTTC	6 cut(s)	31, 473, 722, 1032, 1072, 1560
HpyF3I	CTNAG	6 cut(s)	183, 354, 1026, 1224, 1726, 1733
Hsp92I	GRCGYC	1 cut(s)	74
Hsp92II	CATG	8 cut(s)	247, 563, 712, 761, 770, 781, 1198, 1381
HspAI	GCGC	1 cut(s)	150
Kpn2I	TCCGGA	1 cut(s)	1753
Kzo9I	GATC	4 cut(s)	827, 904, 921, 1243
LmnI	GCTCC	6 cut(s)	157, 175, 183, 514, 563, 818
Lsp1109I	GCAGC	9 cut(s)	68, 136, 280, 283, 377, 793, 809, 1105, 1730
LweI	GCATC	7 cut(s)	40, 325, 428, 484, 614, 851, 1210
MaeI	CTAG	4 cut(s)	147, 486, 1049, 1251
MaeIII	GTNAC	5 cut(s)	371, 434, 1309, 1415, 1711
MalI	GATC	4 cut(s)	829, 906, 923, 1245
MboI	GATC	4 cut(s)	827, 904, 921, 1243
MfeI	CAATTG	1 cut(s)	498
MflI	RGATCY	2 cut(s)	827, 904
MhlI	GDGCHC	4 cut(s)	65, 180, 958, 1553
MluCI	AATT	6 cut(s)	426, 498, 543, 1291, 1493, 1647
MlyI	GAGTC	1 cut(s)	226
MmeI	TCCRAC	1 cut(s)	1087
Mph1103I	ATGCAT	2 cut(s)	532, 844
MroI	TCCGGA	1 cut(s)	1753
MroXI	GAANNNNTTC	1 cut(s)	1624
MseI	TTAA	6 cut(s)	395, 990, 1403, 1487, 1509, 1783
MslI	CAYNNNNRTG	2 cut(s)	248, 1351
MspA1I	CMGCKG	2 cut(s)	59, 1385
MspI	CCGG	7 cut(s)	104, 155, 173, 254, 919, 1498, 1754
MspR9I	CCNGG	3 cut(s)	104, 1335, 1499
MunI	CAATTG	1 cut(s)	498
Mva1269I	GAATGC	3 cut(s)	530, 671, 1234
MvaI	CCWGG	1 cut(s)	1335
NciI	CCSGG	2 cut(s)	104, 1499
NcoI	CCATGG	2 cut(s)	757, 766
NdeII	GATC	4 cut(s)	827, 904, 921, 1243
NheI	GCTAGC	1 cut(s)	146
NlaIII	CATG	8 cut(s)	247, 563, 712, 761, 770, 781, 1198, 1381
NlaIV	GGNNCC	8 cut(s)	30, 171, 210, 264, 647, 829, 906, 1644
NmeAIII	GCCGAG	1 cut(s)	240
NmuCI	GTSAC	1 cut(s)	434
NsiI	ATGCAT	2 cut(s)	532, 844
NspI	RCATGY	1 cut(s)	1198
PciI	ACATGT	1 cut(s)	1194
PctI	GAATGC	3 cut(s)	530, 671, 1234
PdmI	GAANNNNTTC	1 cut(s)	1624
PfeI	GAWTC	5 cut(s)	302, 1214, 1286, 1625, 1633
PfoI	TCCNGGA	2 cut(s)	1333, 1497
PleI	GAGTC	1 cut(s)	225
PpsI	GAGTC	1 cut(s)	225
PscI	ACATGT	1 cut(s)	1194
PshAI	GACNNNNGTC	1 cut(s)	1457
Psp124BI	GAGCTC	1 cut(s)	180
Psp6I	CCWGG	1 cut(s)	1333
PspGI	CCWGG	1 cut(s)	1333
PspN4I	GGNNCC	8 cut(s)	30, 171, 210, 264, 647, 829, 906, 1644
PspPI	GGNCC	4 cut(s)	28, 890, 1019, 1643
PstI	CTGCAG	2 cut(s)	1012, 1720
PstNI	CAGNNNCTG	1 cut(s)	986
PsuI	RGATCY	2 cut(s)	827, 904
RsaI	GTAC	3 cut(s)	349, 1006, 1609
RsaNI	GTAC	3 cut(s)	348, 1005, 1608
RseI	CAYNNNNRTG	2 cut(s)	248, 1351
SacI	GAGCTC	1 cut(s)	180
SaqAI	TTAA	6 cut(s)	395, 990, 1403, 1487, 1509, 1783
Sau3AI	GATC	4 cut(s)	827, 904, 921, 1243
Sau96I	GGNCC	4 cut(s)	28, 890, 1019, 1643
SchI	GAGTC	1 cut(s)	226
ScrFI	CCNGG	3 cut(s)	104, 1335, 1499
SduI	GDGCHC	4 cut(s)	65, 180, 958, 1553
SfaNI	GCATC	7 cut(s)	40, 325, 428, 484, 614, 851, 1210
SfcI	CTRYAG	2 cut(s)	1008, 1716
SinI	GGWCC	1 cut(s)	890
SmiMI	CAYNNNNRTG	2 cut(s)	248, 1351
Sse9I	AATT	6 cut(s)	426, 498, 543, 1291, 1493, 1647
SspMI	CTAG	4 cut(s)	147, 486, 1049, 1251
SstI	GAGCTC	1 cut(s)	180
StyD4I	CCNGG	3 cut(s)	102, 1333, 1497
StyI	CCWWGG	3 cut(s)	757, 766, 997
TaqI	TCGA	3 cut(s)	89, 129, 314
TaqII	GACCGA	1 cut(s)	215
TasI	AATT	6 cut(s)	426, 498, 543, 1291, 1493, 1647
TatI	WGTACW	1 cut(s)	1607
TauI	GCSGC	5 cut(s)	56, 214, 268, 277, 1388
TfiI	GAWTC	5 cut(s)	302, 1214, 1286, 1625, 1633
Tru1I	TTAA	6 cut(s)	395, 990, 1403, 1487, 1509, 1783
Tru9I	TTAA	6 cut(s)	395, 990, 1403, 1487, 1509, 1783
TscAI	CASTG	7 cut(s)	70, 198, 255, 288, 374, 1270, 1306
TseFI	GTSAC	1 cut(s)	434
TseI	GCWGC	9 cut(s)	56, 124, 268, 271, 390, 797, 806, 1118, 1718
Tsp45I	GTSAC	1 cut(s)	434
TspDTI	ATGAA	5 cut(s)	107, 492, 1366, 1374, 1505
TspRI	CASTG	7 cut(s)	70, 198, 255, 288, 374, 1270, 1306
VpaK11BI	GGWCC	1 cut(s)	890
XapI	RAATTY	2 cut(s)	426, 1493
XceI	RCATGY	1 cut(s)	1198
XcmI	CCANNNNNNNNNTGG	1 cut(s)	764
XmiI	GTMKAC	1 cut(s)	1461
XmnI	GAANNNNTTC	1 cut(s)	1624
XspI	CTAG	4 cut(s)	147, 486, 1049, 1251
Zsp2I	ATGCAT	2 cut(s)	532, 844

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.