Prupe.7G233800_v2.0.a1

tesmin TSO1-like CXC

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
20378353 .. 20384211
5859 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G233800.5

Sequence Viewer

Length: 1779 bp
ATGGGGGAAGCTGACGGGGACGAGTCGGCTCCGACGAAGGGGCAATCGGATGCGGCAACAGCCGCTACGACGTCATCTTCGTCTTCGATGAGCGATGTTCCGGCGAAGAAGCTTGCGAGGCAGCTGGATTTCACGGGATTTGGTGGCACACCGGCGAGTGTGGCAGTGCCGGAGCTCCCTAAACCGCAACTGCCGACCGTGTCGGTGCAACAGAGTCAGCCAAAGCCACCTGTAGTGGCTGTGCCGGTACCCGTTCCACCGCAGCCGCCCATACCTTCAGTGAGGCCTGTGAAACCAGAATCCCCAAAATCAAGACCAAGACCCAATGTTGATGCAAAAGATGGTACTCCTAAGAAGCAAAAACAGTGTAATTGTAAACACTCTCGCTGCTTAAAGCTGTATTGTGAGTGTTTTGCATCTGGAATTTACTGTGACGGTTGCAACTGTGTAAACTGTTGCAATAATGTTGAAAATGAAGGTGCTAGGAGAGATGCAGTTGAAGCTACATTAGAGCGTAATCCAAATGCATTCAGGCCAAAAATTGCAAGTAGCCCTCATGGACCAAGGGATACTCGGGAGGAAGCAGGTGAGGTTCTGATCTTGGGAAAGCACAACAAAGGATGCCATTGCAAGAAATCAGGGTGCCTGAAGAAATACTGTGAATGCTTCCAAGCCAACATTCTCTGCTCTGAGAACTGTAAATGCATAGACTGTAAGAACTTTGAGGGAAGTGAAGAGAGACAAGCTTTATTCCATGGAGACCATGGAAACAACATGGCATATCTTCAACAGGCAGCAAATGCTGCCATTACAGGAGCTATTGGATCCTCTGGCTATGCGTCGTCACCCCCAATATCCAAGAAAAGAAAAGGTCAGGAACTCTTTGGACCGACAGCCAAGGATCCATCAATTCACAGGATTGGACAGTTCCAACAGGGAAACCACATCAGACCCCCTGCTCCCTCTTCTCCGGCTTCGGTCCCTGTTAATCGTCTTGGTGGTACTGCAGGATTAGGGCCTTCTAAGTTTACATACAGGTCTCTCCTAGCAGACATCATACAACCACAGGACTTGAAGGAGCTTTGTTCAGTTTTGGTTGTAGTAGCAGAAGAAGCTGCAAAGACACTTGCAGAACAAAGGAATACAGCAGAGAAGCCGACAGAGACTTCCCTTACTTCAACGACACAAGACAGGTTGCAAAGCCAAAAGGAATCTGAAGCTCAGAAAGCTGTGGCTGATGATTGTTCTAGTGCAAATGAGGCTGATAAAATCAGCCCTGATGATTCCAATTCAGATGGTGCTGATGTGCCCAAAGGGAGGCCAATGTCTCCTGCAACTTTGGCATTGATGTGTGATGAACAAGATACAATGTTCATGTCAGCTGCTTCTCCTAATGGATTAATGGGCGATCGCTGCAACACATCTTCACAGTTGCCTAATGGACAAGGAATGACAGAGGTCTATGCAGAACAGGAAAGGATTGTTTTGACGAAGTTCCGAGATTGTCTTAATAGGCTCATTACTTTTGGAGAAATAAAAGAAACAAAGTGCTCATCATTAGCCCGGAGTGAAGCAGAAACTCAAAAAGAGCAGCCCAGCAATGGCAGTACAAATGCAAGAATGGAAACAGGAAATCAGCAGGGACCAGTTAGCAATGGTGTAGCAAAACCTGCTGTTCCACTCACGGCCAAAACGACAACACCACATATGGTTGCTGCGTTAGCCGTTAGTAAAACTCCCTCCCATCCGGAAAATGGAGAAAGTAGACCGAAAGATTAA

Protein Analysis

593

Amino Acids

63.03

Weight (kDa)

7.69

Isoelectric Point (pI)

54.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 575
AatII GACGTC 1 cut(s) 74
Acc36I ACCTGC 2 cut(s) 575, 1678
Acc65I GGTACC 1 cut(s) 247
AccB1I GGYRCC 2 cut(s) 247, 642
AccI GTMKAC 1 cut(s) 1765
AccIII TCCGGA 1 cut(s) 1747
AciI CCGC 5 cut(s) 53, 63, 185, 260, 266
AclWI GGATC 4 cut(s) 819, 832, 896, 909
AcoI YGGCCR 1 cut(s) 1686
AcsI RAATTY 1 cut(s) 423
AcuI CTGAAG 3 cut(s) 261, 668, 1236
AcyI GRCGYC 1 cut(s) 71
AfaI GTAC 4 cut(s) 249, 346, 1003, 1609
AfiI CCNNNNNNNGG 4 cut(s) 38, 1317, 1601, 1754
AgsI TTSAA 5 cut(s) 470, 500, 788, 1075, 1179
AjuI GAANNNNNNNTTGG 2 cut(s) 663, 695
Alw21I GWGCWC 2 cut(s) 177, 1553
Alw26I GTCTC 5 cut(s) 733, 753, 1044, 1157, 1332
AlwI GGATC 4 cut(s) 819, 832, 896, 909
Ama87I CYCGRG 1 cut(s) 573
Aor13HI TCCGGA 1 cut(s) 1747
AoxI GGCC 5 cut(s) 284, 533, 1016, 1319, 1686
ApoI RAATTY 1 cut(s) 423
ArsI GACNNNNNNTTYG 2 cut(s) 61, 93
AseI ATTAAT 1 cut(s) 1400
AsiSI GCGATCGC 1 cut(s) 1411
Asp718I GGTACC 1 cut(s) 247
AspS9I GGNCC 5 cut(s) 560, 887, 979, 1016, 1643
AsuC2I CCSGG 1 cut(s) 1564
AsuHPI GGTGA 2 cut(s) 599, 837
AvaI CYCGRG 1 cut(s) 573
AvaII GGWCC 4 cut(s) 560, 887, 979, 1643
BaeGI GKGCMC 1 cut(s) 1311
BamHI GGATCC 2 cut(s) 824, 901
BanI GGYRCC 2 cut(s) 247, 642
BanII GRGCYC 1 cut(s) 177
BbsI GAAGAC 1 cut(s) 75
Bbv12I GWGCWC 2 cut(s) 177, 1553
BccI CCATC 4 cut(s) 335, 913, 1289, 1752
BceAI ACGGC 2 cut(s) 1701, 1709
BciVI GTATCC 1 cut(s) 562
BcnI CCSGG 1 cut(s) 1564
BcoDI GTCTC 5 cut(s) 733, 753, 1044, 1157, 1332
BfaI CTAG 3 cut(s) 483, 1046, 1248
BfmI CTRYAG 2 cut(s) 231, 1005
BfuAI ACCTGC 2 cut(s) 575, 1678
BfuI GTATCC 1 cut(s) 562
Bme1390I CCNGG 1 cut(s) 1564
Bme18I GGWCC 4 cut(s) 560, 887, 979, 1643
BmeT110I CYCGRG 1 cut(s) 573
BmgT120I GGNCC 5 cut(s) 560, 887, 979, 1016, 1643
BmiI GGNNCC 7 cut(s) 30, 249, 644, 826, 903, 981, 1644
BmrFI CCNGG 1 cut(s) 1564
BmsI GCATC 5 cut(s) 40, 322, 425, 481, 611
BoxI GACNNNNGTC 1 cut(s) 1457
BpiI GAAGAC 1 cut(s) 75
BpuMI CCSGG 1 cut(s) 1564
BsaHI GRCGYC 1 cut(s) 71
BsaI GGTCTC 2 cut(s) 753, 1044
BsaJI CCNNGG 4 cut(s) 563, 754, 763, 897
BsaWI WCCGGW 1 cut(s) 1747
Bsc4I CCNNNNNNNGG 4 cut(s) 38, 1317, 1601, 1754
Bse118I RCCGGY 2 cut(s) 151, 244
Bse1I ACTGG 1 cut(s) 1646
Bse3DI GCAATG 3 cut(s) 625, 1606, 1660
BseAI TCCGGA 1 cut(s) 1747
BseDI CCNNGG 4 cut(s) 563, 754, 763, 897
BseGI GGATG 3 cut(s) 55, 626, 1744
BseLI CCNNNNNNNGG 4 cut(s) 38, 1317, 1601, 1754
BseMI GCAATG 3 cut(s) 625, 1606, 1660
BseMII CTCAG 2 cut(s) 681, 1235
BseNI ACTGG 1 cut(s) 1646
BseSI GKGCMC 1 cut(s) 1311
BseYI CCCAGC 1 cut(s) 1595
Bsh1285I CGRYCG 2 cut(s) 198, 1411
BshFI GGCC 5 cut(s) 286, 535, 1018, 1321, 1688
BshNI GGYRCC 2 cut(s) 247, 642
BsiEI CGRYCG 2 cut(s) 198, 1411
BsiHKAI GWGCWC 2 cut(s) 177, 1553
BsiHKCI CYCGRG 1 cut(s) 573
BsiSI CCGG 7 cut(s) 101, 152, 170, 245, 971, 1564, 1748
BslFI GGGAC 3 cut(s) 32, 965, 1656
BslI CCNNNNNNNGG 4 cut(s) 38, 1317, 1601, 1754
BsmAI GTCTC 5 cut(s) 733, 753, 1044, 1157, 1332
BsmFI GGGAC 3 cut(s) 32, 965, 1656
BsmI GAATGC 2 cut(s) 527, 668
BsnI GGCC 5 cut(s) 286, 535, 1018, 1321, 1688
Bso31I GGTCTC 2 cut(s) 753, 1044
BsoBI CYCGRG 1 cut(s) 573
Bsp1286I GDGCHC 3 cut(s) 177, 1311, 1553
Bsp13I TCCGGA 1 cut(s) 1747
Bsp143I GATC 4 cut(s) 597, 824, 901, 1408
Bsp19I CCATGG 2 cut(s) 754, 763
BspACI CCGC 5 cut(s) 53, 63, 185, 260, 266
BspANI GGCC 5 cut(s) 286, 535, 1018, 1321, 1688
BspCNI CTCAG 2 cut(s) 682, 1234
BspEI TCCGGA 1 cut(s) 1747
BspLI GGNNCC 7 cut(s) 30, 249, 644, 826, 903, 981, 1644
BspMAI CTGCAG 1 cut(s) 1009
BspMI ACCTGC 2 cut(s) 575, 1678
BspPI GGATC 4 cut(s) 819, 832, 896, 909
BspT107I GGYRCC 2 cut(s) 247, 642
BspTNI GGTCTC 2 cut(s) 753, 1044
BsrDI GCAATG 3 cut(s) 625, 1606, 1660
BsrFI RCCGGY 2 cut(s) 151, 244
BsrI ACTGG 1 cut(s) 1646
BssAI RCCGGY 2 cut(s) 151, 244
BssECI CCNNGG 4 cut(s) 563, 754, 763, 897
BssMI GATC 4 cut(s) 597, 824, 901, 1408
BssNI GRCGYC 1 cut(s) 71
BssT1I CCWWGG 4 cut(s) 563, 754, 763, 897
Bst6I CTCTTC 2 cut(s) 729, 970
BstACI GRCGYC 1 cut(s) 71
BstAPI GCANNNNNTGC 3 cut(s) 800, 803, 1670
BstC8I GCNNGC 1 cut(s) 114
BstDEI CTNAG 4 cut(s) 351, 690, 1023, 1221
BstDSI CCRYGG 2 cut(s) 754, 763
BstF5I GGATG 3 cut(s) 55, 626, 1744
BstKTI GATC 4 cut(s) 600, 827, 904, 1411
BstMAI GTCTC 5 cut(s) 733, 753, 1044, 1157, 1332
BstMBI GATC 4 cut(s) 597, 824, 901, 1408
BstMCI CGRYCG 2 cut(s) 198, 1411
BstPAI GACNNNNGTC 1 cut(s) 1457
BstSCI CCNGG 1 cut(s) 1562
BstSFI CTRYAG 2 cut(s) 231, 1005
BstSLI GKGCMC 1 cut(s) 1311
BstV2I GAAGAC 1 cut(s) 75
BstX2I RGATCY 2 cut(s) 824, 901
BstYI RGATCY 2 cut(s) 824, 901
BsuI GTATCC 1 cut(s) 562
BsuRI GGCC 5 cut(s) 286, 535, 1018, 1321, 1688
BtgI CCRYGG 2 cut(s) 754, 763
BtgZI GCGATG 1 cut(s) 108
BtsCI GGATG 3 cut(s) 55, 626, 1744
BtsI GCAGTG 1 cut(s) 171
BtsIMutI CAGTG 3 cut(s) 171, 285, 371
BveI ACCTGC 2 cut(s) 575, 1678
Cac8I GCNNGC 1 cut(s) 114
Cfr10I RCCGGY 2 cut(s) 151, 244
Cfr13I GGNCC 5 cut(s) 560, 887, 979, 1016, 1643
CseI GACGC 1 cut(s) 828
Csp6I GTAC 4 cut(s) 248, 345, 1002, 1608
CspCI CAANNNNNGTGG 2 cut(s) 1053, 1088
CviAII CATG 5 cut(s) 557, 755, 764, 775, 1375
CviQI GTAC 4 cut(s) 248, 345, 1002, 1608
DdeI CTNAG 4 cut(s) 351, 690, 1023, 1221
DpnI GATC 4 cut(s) 599, 826, 903, 1410
DpnII GATC 4 cut(s) 597, 824, 901, 1408
EaeI YGGCCR 1 cut(s) 1686
Eam1104I CTCTTC 2 cut(s) 729, 970
EarI CTCTTC 2 cut(s) 729, 970
Ecl136II GAGCTC 1 cut(s) 175
Eco130I CCWWGG 4 cut(s) 563, 754, 763, 897
Eco147I AGGCCT 1 cut(s) 286
Eco24I GRGCYC 1 cut(s) 177
Eco31I GGTCTC 2 cut(s) 753, 1044
Eco47I GGWCC 4 cut(s) 560, 887, 979, 1643
Eco53kI GAGCTC 1 cut(s) 175
Eco57I CTGAAG 3 cut(s) 261, 668, 1236
Eco88I CYCGRG 1 cut(s) 573
EcoICRI GAGCTC 1 cut(s) 175
EcoO109I RGGNCCY 1 cut(s) 1016
EcoT14I CCWWGG 4 cut(s) 563, 754, 763, 897
EcoT22I ATGCAT 2 cut(s) 529, 707
EcoT38I GRGCYC 1 cut(s) 177
ErhI CCWWGG 4 cut(s) 563, 754, 763, 897
FaeI CATG 5 cut(s) 560, 758, 767, 778, 1378
FaqI GGGAC 3 cut(s) 32, 965, 1656
FatI CATG 5 cut(s) 556, 754, 763, 774, 1374
FauNDI CATATG 1 cut(s) 1707
FblI GTMKAC 1 cut(s) 1765
FokI GGATG 3 cut(s) 62, 633, 1731
FriOI GRGCYC 1 cut(s) 177
FspBI CTAG 3 cut(s) 483, 1046, 1248
GsaI CCCAGC 1 cut(s) 1599
HaeIII GGCC 5 cut(s) 286, 535, 1018, 1321, 1688
HapII CCGG 7 cut(s) 101, 152, 170, 245, 971, 1564, 1748
HgaI GACGC 1 cut(s) 828
Hin1I GRCGYC 1 cut(s) 71
Hin1II CATG 5 cut(s) 560, 758, 767, 778, 1378
HindIII AAGCTT 2 cut(s) 110, 744
HinfI GANTC 5 cut(s) 23, 214, 299, 1211, 1283
HpaII CCGG 7 cut(s) 101, 152, 170, 245, 971, 1564, 1748
HphI GGTGA 2 cut(s) 599, 837
Hpy166II GTNNAC 4 cut(s) 377, 451, 1029, 1766
Hpy188I TCNGA 9 cut(s) 33, 49, 597, 691, 950, 1216, 1224, 1294, 1499
Hpy188III TCNNGA 5 cut(s) 312, 420, 575, 875, 1748
Hpy8I GTNNAC 4 cut(s) 377, 451, 1029, 1766
Hpy99I CGWCG 3 cut(s) 37, 73, 844
HpyAV CCTTC 5 cut(s) 31, 285, 470, 1029, 1069
HpyCH4IV ACGT 1 cut(s) 71
HpyF3I CTNAG 4 cut(s) 351, 690, 1023, 1221
HpySE526I ACGT 1 cut(s) 71
Hsp92I GRCGYC 1 cut(s) 71
Hsp92II CATG 5 cut(s) 560, 758, 767, 778, 1378
Kpn2I TCCGGA 1 cut(s) 1747
KpnI GGTACC 1 cut(s) 251
Kzo9I GATC 4 cut(s) 597, 824, 901, 1408
LmnI GCTCC 6 cut(s) 34, 172, 180, 815, 964, 1078
LweI GCATC 5 cut(s) 40, 322, 425, 481, 611
MaeI CTAG 3 cut(s) 483, 1046, 1248
MaeII ACGT 1 cut(s) 71
MaeIII GTNAC 2 cut(s) 431, 843
MalI GATC 4 cut(s) 599, 826, 903, 1410
MboI GATC 4 cut(s) 597, 824, 901, 1408
MboII GAAGA 9 cut(s) 69, 75, 118, 661, 746, 776, 957, 1121, 1416
MflI RGATCY 2 cut(s) 824, 901
MhlI GDGCHC 3 cut(s) 177, 1311, 1553
MluCI AATT 5 cut(s) 370, 423, 540, 909, 1288
MlyI GAGTC 2 cut(s) 32, 223
MmeI TCCRAC 2 cut(s) 56, 955
Mph1103I ATGCAT 2 cut(s) 529, 707
MroI TCCGGA 1 cut(s) 1747
MseI TTAA 5 cut(s) 392, 987, 1400, 1509, 1777
MslI CAYNNNNRTG 1 cut(s) 1348
MspA1I CMGCKG 2 cut(s) 124, 1382
MspI CCGG 7 cut(s) 101, 152, 170, 245, 971, 1564, 1748
MspR9I CCNGG 1 cut(s) 1564
Mva1269I GAATGC 2 cut(s) 527, 668
NciI CCSGG 1 cut(s) 1564
NcoI CCATGG 2 cut(s) 754, 763
NdeI CATATG 1 cut(s) 1707
NdeII GATC 4 cut(s) 597, 824, 901, 1408
NlaIII CATG 5 cut(s) 560, 758, 767, 778, 1378
NlaIV GGNNCC 7 cut(s) 30, 249, 644, 826, 903, 981, 1644
NmuCI GTSAC 2 cut(s) 431, 843
NsiI ATGCAT 2 cut(s) 529, 707
PaqCI CACCTGC 1 cut(s) 575
PceI AGGCCT 1 cut(s) 286
PcsI WCGNNNNNNNCGW 3 cut(s) 32, 77, 1691
PctI GAATGC 2 cut(s) 527, 668
PfeI GAWTC 3 cut(s) 299, 1211, 1283
PflFI GACNNNGTC 1 cut(s) 199
Ple19I CGATCG 1 cut(s) 1411
PleI GAGTC 2 cut(s) 31, 222
PpsI GAGTC 2 cut(s) 31, 222
PshAI GACNNNNGTC 1 cut(s) 1457
PshBI ATTAAT 1 cut(s) 1400
Psp124BI GAGCTC 1 cut(s) 177
PspFI CCCAGC 1 cut(s) 1595
PspN4I GGNNCC 7 cut(s) 30, 249, 644, 826, 903, 981, 1644
PspPI GGNCC 5 cut(s) 560, 887, 979, 1016, 1643
PstI CTGCAG 1 cut(s) 1009
PsuI RGATCY 2 cut(s) 824, 901
PsyI GACNNNGTC 1 cut(s) 199
PvuI CGATCG 1 cut(s) 1411
PvuII CAGCTG 2 cut(s) 124, 1382
RgaI GCGATCGC 1 cut(s) 1411
RsaI GTAC 4 cut(s) 249, 346, 1003, 1609
RsaNI GTAC 4 cut(s) 248, 345, 1002, 1608
RseI CAYNNNNRTG 1 cut(s) 1348
SacI GAGCTC 1 cut(s) 177
SaqAI TTAA 5 cut(s) 392, 987, 1400, 1509, 1777
Sau3AI GATC 4 cut(s) 597, 824, 901, 1408
Sau96I GGNCC 5 cut(s) 560, 887, 979, 1016, 1643
SchI GAGTC 2 cut(s) 32, 223
ScrFI CCNGG 1 cut(s) 1564
SduI GDGCHC 3 cut(s) 177, 1311, 1553
SfaAI GCGATCGC 1 cut(s) 1411
SfaNI GCATC 5 cut(s) 40, 322, 425, 481, 611
SfcI CTRYAG 2 cut(s) 231, 1005
SgfI GCGATCGC 1 cut(s) 1411
SgrAI CRCCGGYG 1 cut(s) 151
SinI GGWCC 4 cut(s) 560, 887, 979, 1643
SmiMI CAYNNNNRTG 1 cut(s) 1348
Sse9I AATT 5 cut(s) 370, 423, 540, 909, 1288
SseBI AGGCCT 1 cut(s) 286
SsiI CCGC 5 cut(s) 53, 63, 185, 260, 266
SspMI CTAG 3 cut(s) 483, 1046, 1248
SstI GAGCTC 1 cut(s) 177
StuI AGGCCT 1 cut(s) 286
StyD4I CCNGG 1 cut(s) 1562
StyI CCWWGG 4 cut(s) 563, 754, 763, 897
TaiI ACGT 1 cut(s) 74
TaqI TCGA 1 cut(s) 86
TaqII GACCGA 2 cut(s) 904, 967
TasI AATT 5 cut(s) 370, 423, 540, 909, 1288
TatI WGTACW 1 cut(s) 1607
TauI GCSGC 3 cut(s) 56, 65, 268
TfiI GAWTC 3 cut(s) 299, 1211, 1283
Tru1I TTAA 5 cut(s) 392, 987, 1400, 1509, 1777
Tru9I TTAA 5 cut(s) 392, 987, 1400, 1509, 1777
TscAI CASTG 3 cut(s) 171, 285, 371
TseFI GTSAC 2 cut(s) 431, 843
Tsp45I GTSAC 2 cut(s) 431, 843
TspDTI ATGAA 3 cut(s) 489, 1363, 1371
TspRI CASTG 3 cut(s) 171, 285, 371
Tth111I GACNNNGTC 1 cut(s) 199
VpaK11BI GGWCC 4 cut(s) 560, 887, 979, 1643
VspI ATTAAT 1 cut(s) 1400
XapI RAATTY 1 cut(s) 423
XcmI CCANNNNNNNNNTGG 2 cut(s) 761, 1751
XmiI GTMKAC 1 cut(s) 1765
XspI CTAG 3 cut(s) 483, 1046, 1248
ZraI GACGTC 1 cut(s) 72
Zsp2I ATGCAT 2 cut(s) 529, 707
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.