Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0003177

Physical Location & Seq

Genomic Coordinates Forward (+)

3637846 .. 3642471

Gene Structure 4626 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016067

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGGGGGAAGGCGACGGGGCCGATTCAGCTCCGAAGAAGCCGCAATCGGATGCGGTAACGGCCGGTACAACGACGTCGTCCGGGGACGTTCCGGCGAAGAAGCTTGCGAGGCAGCTCGATTTCACGGGGTTTGGCGCCACCACCTCGGGGAGTGTGGCGTTGCCGGAGCCGCCGAAGCCGCAGCTGCAGACGGTGACTGTGCCGCAGAGTCAGCCGAAGCCGCAGGTGGTGGGGGTGCCGGTGCCGGTGCCGCCGCAGCCACCTGTACCTTCAGTTAGGCCTGTGAAACCAGATTCCCCAAAATCAAGACCTAGACCGAATGTTGATGGTAAAGATGGCACTCCTAAGAAGCAAAAACAGTGTAATTGTAAACACTCTCGCTGCTTAAAGCTGTATTGCGAGTGTTTTGCATCTGGAATTTACTGTGATGGTTGCAACTGTGTAAACTGTTGCAACAATGTTGAAAATGAAGGTGCTAGGCGAGATGCAGTGGAGGCTACTTTGGAGCGTAATCCAAATGCATTCAGGCCAAAAATTGCAAGCAGCCCACATGGACCAAGGGATAGTCGGGAGGAAGCAGGTGAACTTGTGGTCTTGGCAAAGCACAATAAAGGTTGCCACTGCAAGAAATCAGGGTGCCTCAAGAAATATTGCGAATGCTTCCAAGCCAACATTCTCTGCTCTGAGAATTGTAAGTGCATAGACTGCAAAAACTTTGAAGGAAGTGAAGAGAGACAAGCTCTATTTCATGGTGACCATAGCAACAACATGGCATATCTTCAACAGGCAGCAAATGCTGCCATTACTGGAGCAATTGGATCCTCTGGATATATATCATCCCCACCGGTATCCAAGAAAAGAAAAGGTCAGGAACTCTTTTTTGGACAGACAGGCAAGGATCCATCAGCTCATAGGATAGGACAGTTTTCACAGGCAAACCATCTCAGACCGCCTGCACCGTCTTCGTCTTCGGTCCCTGTTGCTCGTCTTGGTACTGCAGGATTAGGGCCTTCAAAGTTCACATACAGGTCTCTCCTAGCAGACATCATCCAACCACAGGACTTGAAGGAGCTTTGCTCAGTTTTGGTTGTGGTAGCAGAAGAAGCAGCAAAGACACTTGCAGACCGAAGAAATGCTGCAGAGAAGCAGGTAGAATATCAGACAGAAGCTTCCCTTGCTACAACCACAGAGGACAGGTTGCAAAGCCAAAAGGAATCTGATACTCAGAAAGCTGTGACTGATGATTGTTCTACAGCAAACCAGGCTGACAAAATCAGCCCTGAAGATTCTAATTCGGATGGTGTTGATGGGCCAAAAGGGAGACCAATGTCTCCCGGAACTTTGGCCTTGATGTGTGATGAACAAGATACAATGTTCATGTCAGCTGCTTCTCCTAATAGGTTAATGGGGGATGGATGCAACACATCTTCTCAGTTGCCTAATGGACAAGGAATGTCAGAAGTCTATGCAGAACAAGAAAGAATTGTGTTAGCAAAGTTTCGAGGCTGTCTAAATATGCTTATCACTCGCGGAGAACTTAAAGAAGCAGAGTGCTCATCTTTAGCCAGAAGTGAAGCGGCAGCTCACAGAGAGCAAGTTGGCAATGGAACTCCAAATCCAAGAACGGAAACAGGCAGTCAACAGGGACCAATGAGCAATGGTGTTGCAAAAACTGCTGTTCCACCTACGGCCAGGACTTCGCAAATGGTTACTGCAGCAGGTTTATCCCCTAGTACTGTGCTTCCAAAACCCCCATCCGCCCCCGAAAATGGCGGAAATAAACCAAAAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04218 map04218

Pfam Domains

Protein Families

TCR

Protein Analysis

598

Amino Acids

63.26

Weight (kDa)

8.3

Isoelectric Point (pI)

54.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCR	PF03638	118 - 153	5.8e-10	Tesmin/TSO1-like CXC domain, cysteine-rich domain
TCR	PF03638	204 - 238	1.5e-12	Tesmin/TSO1-like CXC domain, cysteine-rich domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003177)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20110 AT2G20110 AT2G20110 AT4G29000
fragaria_vesca	FvH4_1g04340 FvH4_1g04340 FvH4_1g04340 FvH4_1g04340 FvH4_1g04340 FvH4_1g04340 FvH4_1g04340 FvH4_1g04340 FvH4_1g04340 FvH4_1g04340 FvH4_1g04340
malus_domestica	MD02G1043000.v1.1 MD15G1181800.v1.1
prunus_persica	Prupe.7G233800_v2.0.a1 Prupe.7G233800_v2.0.a1 Prupe.7G233800_v2.0.a1 Prupe.7G233800_v2.0.a1 Prupe.7G233800_v2.0.a1
pyrus_communis	pycom02g03580 pycom02g03590 pycom15g16400
rosa_chinensis	RchiOBHm_Chr2g0089991
rosa_laevigata	RLG00000016067
rosa_multiflora	Rmu_sc0000226.1_g000019
rosa_roxburghii	Rroxscaffold_2G00151480
rosa_rugosa	Rorug02G0004300 Rorug02G0004400 Rorug02G0004500
rosa_samantha	Rh2AG049700 Rh2BG048400 Rh2CG050600 Rh2DG049900
rosa_wichuraiana	Rw2G004080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	214, 569
AatII	GACGTC	1 cut(s)	77
Acc36I	ACCTGC	4 cut(s)	214, 569, 1138, 1709
AccB1I	GGYRCC	5 cut(s)	134, 235, 241, 247, 636
AccII	CGCG	1 cut(s)	1530
AclWI	GGATC	4 cut(s)	813, 826, 893, 906
AcoI	YGGCCR	2 cut(s)	60, 1689
AcsI	RAATTY	1 cut(s)	417
AcuI	CTGAAG	2 cut(s)	255, 1302
AcyI	GRCGYC	2 cut(s)	74, 135
AfaI	GTAC	4 cut(s)	67, 267, 994, 1735
AfiI	CCNNNNNNNGG	3 cut(s)	147, 1057, 1769
AgeI	ACCGGT	1 cut(s)	844
AgsI	TTSAA	5 cut(s)	464, 719, 782, 1014, 1066
AjnI	CCWGG	2 cut(s)	1260, 1691
AjuI	GAANNNNNNNTTGG	4 cut(s)	657, 689, 864, 896
AloI	GAACNNNNNNTCC	2 cut(s)	1600, 1632
Alw21I	GWGCWC	1 cut(s)	1556
Alw26I	GTCTC	4 cut(s)	727, 1035, 1315, 1335
AlwI	GGATC	4 cut(s)	813, 826, 893, 906
Ama87I	CYCGRG	1 cut(s)	145
AoxI	GGCC	8 cut(s)	18, 60, 278, 527, 1007, 1310, 1344, 1689
ApoI	RAATTY	1 cut(s)	417
AsiGI	ACCGGT	1 cut(s)	844
AspLEI	GCGC	1 cut(s)	137
AspS9I	GGNCC	6 cut(s)	18, 554, 973, 1007, 1310, 1646
AsuC2I	CCSGG	2 cut(s)	82, 1335
AsuHPI	GGTGA	3 cut(s)	205, 593, 764
AvaI	CYCGRG	1 cut(s)	145
AvaII	GGWCC	3 cut(s)	554, 973, 1646
BamHI	GGATCC	2 cut(s)	818, 898
BanI	GGYRCC	5 cut(s)	134, 235, 241, 247, 636
BbsI	GAAGAC	2 cut(s)	954, 960
Bbv12I	GWGCWC	1 cut(s)	1556
BccI	CCATC	9 cut(s)	320, 329, 422, 910, 948, 1292, 1301, 1406, 1762
BceAI	ACGGC	2 cut(s)	75, 1704
BcgI	CGANNNNNNTGC	4 cut(s)	389, 423, 945, 979
BciT130I	CCWGG	2 cut(s)	1262, 1693
BciVI	GTATCC	1 cut(s)	859
BcnI	CCSGG	2 cut(s)	82, 1335
BcoDI	GTCTC	4 cut(s)	727, 1035, 1315, 1335
BfaI	CTAG	4 cut(s)	312, 477, 1037, 1731
BfmI	CTRYAG	5 cut(s)	185, 996, 1137, 1251, 1713
BfoI	RGCGCY	1 cut(s)	138
BfuAI	ACCTGC	4 cut(s)	214, 569, 1138, 1709
BfuI	GTATCC	1 cut(s)	859
BmcAI	AGTACT	1 cut(s)	1735
Bme1390I	CCNGG	4 cut(s)	82, 1262, 1335, 1693
Bme18I	GGWCC	3 cut(s)	554, 973, 1646
BmeT110I	CYCGRG	1 cut(s)	145
BmgT120I	GGNCC	6 cut(s)	18, 554, 973, 1007, 1310, 1646
BmrFI	CCNGG	4 cut(s)	82, 1262, 1335, 1693
BmsI	GCATC	4 cut(s)	40, 419, 475, 1406
BoxI	GACNNNNGTC	1 cut(s)	1327
BpiI	GAAGAC	2 cut(s)	954, 960
BplI	GAGNNNNNCTC	4 cut(s)	724, 756, 1061, 1093
BpmI	CTGGAG	1 cut(s)	828
BpuEI	CTTGAG	1 cut(s)	626
BpuMI	CCSGG	2 cut(s)	82, 1335
BsaBI	GATNNNNATC	1 cut(s)	832
BsaHI	GRCGYC	2 cut(s)	74, 135
BsaI	GGTCTC	2 cut(s)	1035, 1315
BsaJI	CCNNGG	3 cut(s)	81, 144, 557
BsaWI	WCCGGW	1 cut(s)	844
Bsc4I	CCNNNNNNNGG	3 cut(s)	147, 1057, 1769
Bse118I	RCCGGY	4 cut(s)	62, 238, 244, 844
Bse1I	ACTGG	1 cut(s)	811
Bse3DI	GCAATG	2 cut(s)	1609, 1663
Bse8I	GATNNNNATC	1 cut(s)	832
BseBI	CCWGG	2 cut(s)	1262, 1693
BseDI	CCNNGG	3 cut(s)	81, 144, 557
BseGI	GGATG	7 cut(s)	55, 836, 1047, 1303, 1417, 1421, 1754
BseJI	GATNNNNATC	1 cut(s)	832
BseLI	CCNNNNNNNGG	3 cut(s)	147, 1057, 1769
BseMI	GCAATG	2 cut(s)	1609, 1663
BseMII	CTCAG	5 cut(s)	675, 958, 1092, 1238, 1445
BseNI	ACTGG	1 cut(s)	811
BseX3I	CGGCCG	1 cut(s)	60
BsgI	GTGCAG	1 cut(s)	939
Bsh1236I	CGCG	1 cut(s)	1530
Bsh1285I	CGRYCG	1 cut(s)	63
BshFI	GGCC	8 cut(s)	20, 62, 280, 529, 1009, 1312, 1346, 1691
BshNI	GGYRCC	5 cut(s)	134, 235, 241, 247, 636
BshTI	ACCGGT	1 cut(s)	844
BsiEI	CGRYCG	1 cut(s)	63
BsiHKAI	GWGCWC	1 cut(s)	1556
BsiHKCI	CYCGRG	1 cut(s)	145
BsiSI	CCGG	8 cut(s)	63, 81, 92, 164, 239, 245, 845, 1335
BslFI	GGGAC	3 cut(s)	98, 959, 1659
BslI	CCNNNNNNNGG	3 cut(s)	147, 1057, 1769
BsmAI	GTCTC	4 cut(s)	727, 1035, 1315, 1335
BsmFI	GGGAC	3 cut(s)	98, 959, 1659
BsmI	GAATGC	2 cut(s)	521, 662
BsnI	GGCC	8 cut(s)	20, 62, 280, 529, 1009, 1312, 1346, 1691
Bso31I	GGTCTC	2 cut(s)	1035, 1315
BsoBI	CYCGRG	1 cut(s)	145
Bsp1286I	GDGCHC	1 cut(s)	1556
Bsp143I	GATC	2 cut(s)	818, 898
BspANI	GGCC	8 cut(s)	20, 62, 280, 529, 1009, 1312, 1346, 1691
BspCNI	CTCAG	5 cut(s)	676, 957, 1091, 1237, 1444
BspFNI	CGCG	1 cut(s)	1530
BspMAI	CTGCAG	4 cut(s)	189, 1000, 1141, 1717
BspMI	ACCTGC	4 cut(s)	214, 569, 1138, 1709
BspPI	GGATC	4 cut(s)	813, 826, 893, 906
BspT107I	GGYRCC	5 cut(s)	134, 235, 241, 247, 636
BspTNI	GGTCTC	2 cut(s)	1035, 1315
BsrDI	GCAATG	2 cut(s)	1609, 1663
BsrFI	RCCGGY	4 cut(s)	62, 238, 244, 844
BsrI	ACTGG	1 cut(s)	811
BssAI	RCCGGY	4 cut(s)	62, 238, 244, 844
BssECI	CCNNGG	3 cut(s)	81, 144, 557
BssMI	GATC	2 cut(s)	818, 898
BssNI	GRCGYC	2 cut(s)	74, 135
BssT1I	CCWWGG	1 cut(s)	557
Bst2UI	CCWGG	2 cut(s)	1262, 1693
Bst4CI	ACNGT	9 cut(s)	193, 199, 360, 425, 440, 449, 924, 960, 1738
Bst6I	CTCTTC	1 cut(s)	723
BstACI	GRCGYC	2 cut(s)	74, 135
BstAPI	GCANNNNNTGC	4 cut(s)	705, 794, 797, 1673
BstC8I	GCNNGC	3 cut(s)	105, 541, 954
BstDEI	CTNAG	6 cut(s)	345, 684, 944, 1078, 1224, 1431
BstEII	GGTNACC	1 cut(s)	752
BstF5I	GGATG	7 cut(s)	55, 836, 1047, 1303, 1417, 1421, 1754
BstFNI	CGCG	1 cut(s)	1530
BstH2I	RGCGCY	1 cut(s)	138
BstHHI	GCGC	1 cut(s)	137
BstKTI	GATC	2 cut(s)	821, 901
BstMAI	GTCTC	4 cut(s)	727, 1035, 1315, 1335
BstMBI	GATC	2 cut(s)	818, 898
BstMCI	CGRYCG	1 cut(s)	63
BstNI	CCWGG	2 cut(s)	1262, 1693
BstPAI	GACNNNNGTC	1 cut(s)	1327
BstPI	GGTNACC	1 cut(s)	752
BstSCI	CCNGG	4 cut(s)	80, 1260, 1333, 1691
BstSFI	CTRYAG	5 cut(s)	185, 996, 1137, 1251, 1713
BstUI	CGCG	1 cut(s)	1530
BstV2I	GAAGAC	2 cut(s)	954, 960
BstX2I	RGATCY	2 cut(s)	818, 898
BstYI	RGATCY	2 cut(s)	818, 898
BstZI	CGGCCG	1 cut(s)	60
BsuI	GTATCC	1 cut(s)	859
BsuRI	GGCC	8 cut(s)	20, 62, 280, 529, 1009, 1312, 1346, 1691
BtsCI	GGATG	7 cut(s)	55, 836, 1047, 1303, 1417, 1421, 1754
BtsI	GCAGTG	2 cut(s)	495, 619
BtsIMutI	CAGTG	3 cut(s)	365, 495, 619
BveI	ACCTGC	4 cut(s)	214, 569, 1138, 1709
Cac8I	GCNNGC	3 cut(s)	105, 541, 954
CfoI	GCGC	1 cut(s)	137
Cfr10I	RCCGGY	4 cut(s)	62, 238, 244, 844
Cfr13I	GGNCC	6 cut(s)	18, 554, 973, 1007, 1310, 1646
Csp6I	GTAC	4 cut(s)	66, 266, 993, 1734
CspAI	ACCGGT	1 cut(s)	844
CspCI	CAANNNNNGTGG	2 cut(s)	1044, 1079
CviAII	CATG	4 cut(s)	551, 749, 769, 1378
CviQI	GTAC	4 cut(s)	66, 266, 993, 1734
DdeI	CTNAG	6 cut(s)	345, 684, 944, 1078, 1224, 1431
DinI	GGCGCC	1 cut(s)	136
DpnI	GATC	2 cut(s)	820, 900
DpnII	GATC	2 cut(s)	818, 898
EaeI	YGGCCR	2 cut(s)	60, 1689
EagI	CGGCCG	1 cut(s)	60
Eam1104I	CTCTTC	1 cut(s)	723
EarI	CTCTTC	1 cut(s)	723
EciI	GGCGGA	2 cut(s)	1747, 1788
EclXI	CGGCCG	1 cut(s)	60
Eco130I	CCWWGG	1 cut(s)	557
Eco147I	AGGCCT	1 cut(s)	280
Eco31I	GGTCTC	2 cut(s)	1035, 1315
Eco47I	GGWCC	3 cut(s)	554, 973, 1646
Eco52I	CGGCCG	1 cut(s)	60
Eco57I	CTGAAG	2 cut(s)	255, 1302
Eco88I	CYCGRG	1 cut(s)	145
Eco91I	GGTNACC	1 cut(s)	752
EcoO109I	RGGNCCY	1 cut(s)	1007
EcoO65I	GGTNACC	1 cut(s)	752
EcoRII	CCWGG	2 cut(s)	1260, 1691
EcoT14I	CCWWGG	1 cut(s)	557
EcoT22I	ATGCAT	1 cut(s)	523
EgeI	GGCGCC	1 cut(s)	136
EheI	GGCGCC	1 cut(s)	136
ErhI	CCWWGG	1 cut(s)	557
FaeI	CATG	4 cut(s)	554, 752, 772, 1381
FalI	AAGNNNNNCTT	2 cut(s)	1158, 1190
FaqI	GGGAC	3 cut(s)	98, 959, 1659
FatI	CATG	4 cut(s)	550, 748, 768, 1377
FokI	GGATG	7 cut(s)	62, 823, 1034, 1310, 1424, 1428, 1741
FspBI	CTAG	4 cut(s)	312, 477, 1037, 1731
GlaI	GCGC	1 cut(s)	136
GsuI	CTGGAG	1 cut(s)	828
HaeII	RGCGCY	1 cut(s)	138
HaeIII	GGCC	8 cut(s)	20, 62, 280, 529, 1009, 1312, 1346, 1691
HapII	CCGG	8 cut(s)	63, 81, 92, 164, 239, 245, 845, 1335
HhaI	GCGC	1 cut(s)	137
Hin1I	GRCGYC	2 cut(s)	74, 135
Hin1II	CATG	4 cut(s)	554, 752, 772, 1381
Hin6I	GCGC	1 cut(s)	135
HinP1I	GCGC	1 cut(s)	135
HincII	GTYRAC	1 cut(s)	1640
HindII	GTYRAC	1 cut(s)	1640
HindIII	AAGCTT	3 cut(s)	101, 1167, 1788
HinfI	GANTC	5 cut(s)	23, 208, 293, 1214, 1286
HpaII	CCGG	8 cut(s)	63, 81, 92, 164, 239, 245, 845, 1335
HphI	GGTGA	3 cut(s)	205, 593, 764
Hpy166II	GTNNAC	5 cut(s)	371, 445, 584, 1020, 1640
Hpy188I	TCNGA	9 cut(s)	33, 49, 685, 947, 1161, 1219, 1227, 1297, 1459
Hpy188III	TCNNGA	6 cut(s)	306, 414, 569, 643, 825, 869
Hpy8I	GTNNAC	5 cut(s)	371, 445, 584, 1020, 1640
Hpy99I	CGWCG	3 cut(s)	17, 76, 79
HpyAV	CCTTC	5 cut(s)	279, 464, 713, 1020, 1060
HpyCH4III	ACNGT	9 cut(s)	193, 199, 360, 425, 440, 449, 924, 960, 1738
HpyCH4IV	ACGT	2 cut(s)	74, 87
HpyF3I	CTNAG	6 cut(s)	345, 684, 944, 1078, 1224, 1431
HpySE526I	ACGT	2 cut(s)	74, 87
Hsp92I	GRCGYC	2 cut(s)	74, 135
Hsp92II	CATG	4 cut(s)	554, 752, 772, 1381
HspAI	GCGC	1 cut(s)	135
KasI	GGCGCC	1 cut(s)	134
Kzo9I	GATC	2 cut(s)	818, 898
LmnI	GCTCC	5 cut(s)	34, 166, 505, 809, 1069
LweI	GCATC	4 cut(s)	40, 419, 475, 1406
MaeI	CTAG	4 cut(s)	312, 477, 1037, 1731
MaeII	ACGT	2 cut(s)	74, 87
MaeIII	GTNAC	5 cut(s)	55, 193, 752, 1234, 1708
MalI	GATC	2 cut(s)	820, 900
MboI	GATC	2 cut(s)	818, 898
MfeI	CAATTG	1 cut(s)	813
MflI	RGATCY	2 cut(s)	818, 898
MhlI	GDGCHC	1 cut(s)	1556
MluCI	AATT	7 cut(s)	364, 417, 534, 688, 813, 1291, 1482
Mly113I	GGCGCC	1 cut(s)	135
MlyI	GAGTC	1 cut(s)	217
MmeI	TCCRAC	1 cut(s)	1075
MnlI	CCTC	8 cut(s)	102, 154, 487, 565, 650, 832, 1183, 1496
Mph1103I	ATGCAT	1 cut(s)	523
MseI	TTAA	4 cut(s)	386, 1403, 1539, 1792
MspA1I	CMGCKG	2 cut(s)	184, 1385
MspI	CCGG	8 cut(s)	63, 81, 92, 164, 239, 245, 845, 1335
MspR9I	CCNGG	4 cut(s)	82, 1262, 1335, 1693
MunI	CAATTG	1 cut(s)	813
Mva1269I	GAATGC	2 cut(s)	521, 662
MvaI	CCWGG	2 cut(s)	1262, 1693
MvnI	CGCG	1 cut(s)	1530
NarI	GGCGCC	1 cut(s)	135
NciI	CCSGG	2 cut(s)	82, 1335
NdeII	GATC	2 cut(s)	818, 898
NlaIII	CATG	4 cut(s)	554, 752, 772, 1381
NmuCI	GTSAC	3 cut(s)	193, 752, 1234
NsiI	ATGCAT	1 cut(s)	523
PaqCI	CACCTGC	2 cut(s)	214, 569
PceI	AGGCCT	1 cut(s)	280
PctI	GAATGC	2 cut(s)	521, 662
PfeI	GAWTC	4 cut(s)	23, 293, 1214, 1286
PflFI	GACNNNGTC	1 cut(s)	76
PfoI	TCCNGGA	1 cut(s)	1333
PinAI	ACCGGT	1 cut(s)	844
PleI	GAGTC	1 cut(s)	216
PluTI	GGCGCC	1 cut(s)	138
PpsI	GAGTC	1 cut(s)	216
PshAI	GACNNNNGTC	1 cut(s)	1327
Psp6I	CCWGG	2 cut(s)	1260, 1691
PspEI	GGTNACC	1 cut(s)	752
PspGI	CCWGG	2 cut(s)	1260, 1691
PspPI	GGNCC	6 cut(s)	18, 554, 973, 1007, 1310, 1646
PstI	CTGCAG	4 cut(s)	189, 1000, 1141, 1717
PsuI	RGATCY	2 cut(s)	818, 898
PsyI	GACNNNGTC	1 cut(s)	76
PvuII	CAGCTG	2 cut(s)	184, 1385
RsaI	GTAC	4 cut(s)	67, 267, 994, 1735
RsaNI	GTAC	4 cut(s)	66, 266, 993, 1734
SaqAI	TTAA	4 cut(s)	386, 1403, 1539, 1792
Sau3AI	GATC	2 cut(s)	818, 898
Sau96I	GGNCC	6 cut(s)	18, 554, 973, 1007, 1310, 1646
ScaI	AGTACT	1 cut(s)	1735
SchI	GAGTC	1 cut(s)	217
ScrFI	CCNGG	4 cut(s)	82, 1262, 1335, 1693
SduI	GDGCHC	1 cut(s)	1556
SfaNI	GCATC	4 cut(s)	40, 419, 475, 1406
SfcI	CTRYAG	5 cut(s)	185, 996, 1137, 1251, 1713
SfoI	GGCGCC	1 cut(s)	136
SinI	GGWCC	3 cut(s)	554, 973, 1646
SmlI	CTYRAG	1 cut(s)	641
SmoI	CTYRAG	1 cut(s)	641
Sse9I	AATT	7 cut(s)	364, 417, 534, 688, 813, 1291, 1482
SseBI	AGGCCT	1 cut(s)	280
SspDI	GGCGCC	1 cut(s)	134
SspI	AATATT	1 cut(s)	650
SspMI	CTAG	4 cut(s)	312, 477, 1037, 1731
StuI	AGGCCT	1 cut(s)	280
StyD4I	CCNGG	4 cut(s)	80, 1260, 1333, 1691
StyI	CCWWGG	1 cut(s)	557
TaaI	ACNGT	9 cut(s)	193, 199, 360, 425, 440, 449, 924, 960, 1738
TaiI	ACGT	2 cut(s)	77, 90
TaqI	TCGA	2 cut(s)	117, 1501
TaqII	GACCGA	3 cut(s)	331, 961, 1140
TasI	AATT	7 cut(s)	364, 417, 534, 688, 813, 1291, 1482
TatI	WGTACW	1 cut(s)	1733
TauI	GCSGC	8 cut(s)	43, 172, 181, 205, 223, 253, 256, 1580
TfiI	GAWTC	4 cut(s)	23, 293, 1214, 1286
Tru1I	TTAA	4 cut(s)	386, 1403, 1539, 1792
Tru9I	TTAA	4 cut(s)	386, 1403, 1539, 1792
TscAI	CASTG	3 cut(s)	365, 495, 626
TseFI	GTSAC	3 cut(s)	193, 752, 1234
Tsp45I	GTSAC	3 cut(s)	193, 752, 1234
TspDTI	ATGAA	4 cut(s)	483, 737, 1366, 1374
TspGWI	ACGGA	1 cut(s)	1640
TspRI	CASTG	3 cut(s)	365, 495, 626
Tth111I	GACNNNGTC	1 cut(s)	76
VpaK11BI	GGWCC	3 cut(s)	554, 973, 1646
XapI	RAATTY	1 cut(s)	417
XspI	CTAG	4 cut(s)	312, 477, 1037, 1731
ZraI	GACGTC	1 cut(s)	75
ZrmI	AGTACT	1 cut(s)	1735
Zsp2I	ATGCAT	1 cut(s)	523

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.