Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0006286

Physical Location & Seq

Genomic Coordinates Forward (+)

18210935 .. 18214914

Gene Structure 3980 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1223900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1719 bp

ATGACTTCGTCGAAGAAAAGTTACAAGGAGAAAGTTGCCCGCCGCAAGGAGGAGAAAGCGGCGGAGCAACCGGAGTTGCCGAAGTACAGAGACAGAGCTAAGGAGCGAAGGGAAGATCAAAATCCCGATTATGAGCCGACTGAATTGGGTTCTTTTCACGCCGTTGCGCCTCCCGGAAACATTGATCTCCGGGCAGCTGAGGTACAGAAGTTATCCATTGAGAAGAGCAAGTATCTTGGAGGTGATGTGGAACACACACATTTGGTCAAAGGATTAGATTACGCTTTACTTAACAAAGTAAGAAGTGAGATTGACAAAAGGCCAGATGATGGAGATGAGACTGATGCAAAGTCTAGAGCATCAAAGGAAGACCAAAAAATTTCATTTCGCACTGCTACCGCAAAGTCAGTGTACCAATGGATAGTCAAGCCCCACGCTGTTATCAAAACCAACGAGATGTTCCTACCTGGTAGAATGTCGTTCATTTTTAACATGGAGGGAGGATACACCCATGACATCCCAACCACCTTGCATAGGAGTAAAGCTGACTGTCCACAGACAGAGGAAGCAGTAACTGTCAATGTTGATGGTTCTGTACTTGACCGAATTGCTAAAATTATGTCATATCTTCGTCTTGGATCTTCTGGGAAGGTTCTCAAGAAGAAAAAGAAGGAAAAAGATGCAAGAGGAAAGATTTCAGTCGTTGGTAATGACTATGATGGAGAGGATAAGTCCTTGAAGCCTGATGTTGGGATTTTGAAGAAGGAAACTAAAAGGGAGATTTTGCCACCACCCCCTCCACCCCCTCCCAGGAAAAATCACATAGATTCAAAAGCACAACAAGGCCCAACTGTTGCCAGAGTAGATGAGGATGACATTTTTGTTGGGGATGGCGTTGACTATGTTGTTCCTGGTAAAGACTTGAGTCAAAGCCCGCTCTCTGAGGACATGGAAGAGTCTCCTCGGAACAAGGAAAGAGTTTCTTATTTTGATGAACCTGCTTATGGTCCCGTCCAACCCGTCCAATCCTATGGGGTGCCTCAGGAATGGCAAGATATGAACGGATACAATGCGGTGCAAACACAAACAATGGATGGTGCCTACCAGGGAGAGTGGCCAGAATACCAATATGCTGAGCAAATGGCTTATCCTGAACAATACCTCCAGGCAAATATGGAGGGTTATGATGAACAAACAGGCTTAAACATGCAGGATCCACGCTTTATGACTCAAGAGGAGAAGGATCGAGGTTTAGGATCTGTGTTTAAGCGGGATGACCAAAGACTACAACAATTGAGGGAGAAGGATGCCCGAGAAAAGGATCCAAACTTCATCTCGGAGAGTTATTCTGAATGTTACCCTGGTTATCAAGAATATAATCGCGAGGTGGTTGACAGTGACGATGAAGATGACTTGTCAAAAATGGATATGGGTGGACGAGCTAAGGGTCGTCTTCACCGGTGGGACTTCGAGACTGAAGAAGAATGGGCAACATACAATGAGCAAAAGGAAGCTATGCCCAAGGCAGCTTTTCAGTTTGGTGTGAAGATGCAAGATGGTCGTAAGACACGAAAGCAAAACAAGGACCAGAAGATCACTAATGACCTGCACAAGATCAACAAGATACTTGCTAGAAAGAAGATGGAGAAGGATATGGACGGTGACGGTGGTGGCCATTATGACGATGATGAACAGCCTGGCAAGAAGATTCGGGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000075 GO:0000278 GO:0000375 GO:0000377 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007049 GO:0007088 GO:0007093 GO:0007094 GO:0007346 GO:0008104 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010564 GO:0010639 GO:0010948 GO:0010965 GO:0016070 GO:0016071 GO:0022402 GO:0030071 GO:0031577 GO:0031974 GO:0031981 GO:0032991 GO:0033036 GO:0033043 GO:0033044 GO:0033045 GO:0033046 GO:0033047 GO:0033048 GO:0033365 GO:0034501 GO:0034502 GO:0034613 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045786 GO:0045839 GO:0045841 GO:0045930 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051129 GO:0051179 GO:0051641 GO:0051726 GO:0051783 GO:0051784 GO:0051983 GO:0051985 GO:0065007 GO:0070013 GO:0070727 GO:0071005 GO:0071011 GO:0071173 GO:0071174 GO:0071459 GO:0071704 GO:0090304 GO:1901360 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902099 GO:1902100 GO:1903047 GO:1905818 GO:1905819 GO:1990904 GO:2000816 GO:2001251

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RED_C RED_N

Protein Analysis

573

Amino Acids

65.5

Weight (kDa)

5.48

Isoelectric Point (pI)

48.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RED_N	PF07808	6 - 223	1.3e-82	RED-like protein N-terminal region
RED_C	PF07807	449 - 554	5.4e-43	RED-like protein C-terminal region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006286)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26460
fragaria_vesca	FvH4_1g09440 FvH4_1g09440 FvH4_1g09440 FvH4_1g09440 FvH4_1g09440 FvH4_1g09440
malus_domestica	MD02G1102700.v1.1 MD15G1223900.v1.1
prunus_persica	Prupe.7G191600_v2.0.a1 Prupe.7G191600_v2.0.a1
pyrus_communis	pycom02g08040 pycom15g19810
rosa_chinensis	RchiOBHm_Chr2g0095991
rosa_laevigata	RLG00000016615 RLG00000016631
rosa_multiflora	Rmu_sc0002497.1_g000011 Rmu_sc0018414.1_g000005
rosa_roxburghii	Rroxscaffold_2G00145880
rosa_rugosa	Rorug02G0055700 Rorug02G0055800 Rorug02G0065300
rosa_samantha	Rh2AG103600 Rh2BG105100 Rh2CG107600 Rh2DG105500
rosa_wichuraiana	Rw2G007900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1006, 1614
AccB1I	GGYRCC	2 cut(s)	1036, 1097
AccB7I	CCANNNNNTGG	1 cut(s)	329
AccBSI	CCGCTC	1 cut(s)	937
AccII	CGCG	1 cut(s)	1383
AciI	CCGC	8 cut(s)	40, 43, 59, 62, 399, 935, 1073, 1270
AclWI	GGATC	7 cut(s)	646, 1208, 1221, 1251, 1264, 1316, 1329
AcoI	YGGCCR	2 cut(s)	1115, 1672
AcsI	RAATTY	1 cut(s)	378
AcuI	CTGAAG	1 cut(s)	1497
AfaI	GTAC	4 cut(s)	86, 204, 413, 597
AfiI	CCNNNNNNNGG	8 cut(s)	46, 49, 329, 534, 749, 810, 1004, 1318
AgeI	ACCGGT	1 cut(s)	1458
AgsI	TTSAA	3 cut(s)	739, 760, 831
AjnI	CCWGG	7 cut(s)	466, 809, 910, 1104, 1164, 1360, 1696
AjuI	GAANNNNNNNTTGG	2 cut(s)	443, 475
AloI	GAACNNNNNNTCC	2 cut(s)	1146, 1178
AluBI	AGCT	6 cut(s)	98, 197, 545, 1442, 1514, 1529
AluI	AGCT	6 cut(s)	98, 197, 545, 1442, 1514, 1529
Alw26I	GTCTC	4 cut(s)	84, 332, 963, 1466
AlwI	GGATC	7 cut(s)	646, 1208, 1221, 1251, 1264, 1316, 1329
AlwNI	CAGNNNCTG	1 cut(s)	575
Ama87I	CYCGRG	1 cut(s)	1311
AoxI	GGCC	4 cut(s)	320, 844, 1115, 1672
ApeKI	GCWGC	2 cut(s)	194, 1526
ApoI	RAATTY	1 cut(s)	378
AsiGI	ACCGGT	1 cut(s)	1458
Asp700I	GAANNNNTTC	1 cut(s)	694
AspLEI	GCGC	1 cut(s)	169
AspS9I	GGNCC	3 cut(s)	845, 1007, 1585
AsuC2I	CCSGG	2 cut(s)	174, 191
AsuHPI	GGTGA	3 cut(s)	254, 1448, 1673
AvaI	CYCGRG	1 cut(s)	1311
AvaII	GGWCC	2 cut(s)	1007, 1585
AxyI	CCTNAGG	1 cut(s)	1041
BaeI	ACNNNNGTAYC	2 cut(s)	194, 227
BalI	TGGCCA	2 cut(s)	1117, 1674
BamHI	GGATCC	2 cut(s)	1213, 1321
BanI	GGYRCC	2 cut(s)	1036, 1097
BarI	GAAGNNNNNNTAC	1 cut(s)	37
BbsI	GAAGAC	2 cut(s)	375, 1445
BbvCI	CCTCAGC	1 cut(s)	198
BbvI	GCAGC	2 cut(s)	206, 1538
BccI	CCATC	7 cut(s)	323, 581, 713, 884, 1088, 1550, 1636
BceAI	ACGGC	1 cut(s)	146
BcgI	CGANNNNNNTGC	2 cut(s)	1541, 1575
BciT130I	CCWGG	7 cut(s)	468, 811, 912, 1106, 1166, 1362, 1698
BciVI	GTATCC	2 cut(s)	497, 1058
BcnI	CCSGG	2 cut(s)	174, 191
BcoDI	GTCTC	4 cut(s)	84, 332, 963, 1466
BfaI	CTAG	2 cut(s)	354, 1632
BfuAI	ACCTGC	2 cut(s)	1006, 1614
BfuI	GTATCC	2 cut(s)	497, 1058
BisI	GCNGC	4 cut(s)	43, 60, 195, 1527
BlpI	GCTNAGC	1 cut(s)	1134
BlsI	GCNGC	4 cut(s)	44, 61, 196, 1528
Bme1390I	CCNGG	9 cut(s)	174, 191, 468, 811, 912, 1106, 1166, 1362, 1698
Bme18I	GGWCC	2 cut(s)	1007, 1585
BmeT110I	CYCGRG	1 cut(s)	1311
BmgT120I	GGNCC	3 cut(s)	845, 1007, 1585
BmiI	GGNNCC	5 cut(s)	1009, 1038, 1099, 1215, 1323
BmrFI	CCNGG	9 cut(s)	174, 191, 468, 811, 912, 1106, 1166, 1362, 1698
BmsI	GCATC	5 cut(s)	334, 368, 670, 1297, 1539
BoxI	GACNNNNGTC	1 cut(s)	924
BpiI	GAAGAC	2 cut(s)	375, 1445
BpmI	CTGGAG	1 cut(s)	1148
Bpu10I	CCTNAGC	3 cut(s)	99, 198, 1443
Bpu1102I	GCTNAGC	1 cut(s)	1134
BpuEI	CTTGAG	3 cut(s)	641, 943, 1215
BpuMI	CCSGG	2 cut(s)	174, 191
BsaBI	GATNNNNATC	1 cut(s)	120
BsaJI	CCNNGG	5 cut(s)	809, 962, 1105, 1360, 1521
BsaWI	WCCGGW	2 cut(s)	70, 1458
BsaXI	ACNNNNNCTCC	4 cut(s)	231, 261, 1146, 1176
Bsc4I	CCNNNNNNNGG	8 cut(s)	46, 49, 329, 534, 749, 810, 1004, 1318
Bse118I	RCCGGY	1 cut(s)	1458
Bse21I	CCTNAGG	1 cut(s)	1041
Bse8I	GATNNNNATC	1 cut(s)	120
BseBI	CCWGG	7 cut(s)	468, 811, 912, 1106, 1166, 1362, 1698
BseDI	CCNNGG	5 cut(s)	809, 962, 1105, 1360, 1521
BseGI	GGATG	6 cut(s)	516, 877, 895, 1099, 1279, 1312
BseJI	GATNNNNATC	1 cut(s)	120
BseLI	CCNNNNNNNGG	8 cut(s)	46, 49, 329, 534, 749, 810, 1004, 1318
BseMII	CTCAG	4 cut(s)	189, 933, 1055, 1125
BseRI	GAGGAG	3 cut(s)	65, 951, 1250
BseXI	GCAGC	2 cut(s)	206, 1538
BsgI	GTGCAG	1 cut(s)	1592
Bsh1236I	CGCG	1 cut(s)	1383
BshFI	GGCC	4 cut(s)	322, 846, 1117, 1674
BshNI	GGYRCC	2 cut(s)	1036, 1097
BshTI	ACCGGT	1 cut(s)	1458
BsiHKCI	CYCGRG	1 cut(s)	1311
BsiSI	CCGG	4 cut(s)	71, 174, 190, 1459
BslFI	GGGAC	2 cut(s)	993, 1478
BslI	CCNNNNNNNGG	8 cut(s)	46, 49, 329, 534, 749, 810, 1004, 1318
BsmAI	GTCTC	4 cut(s)	84, 332, 963, 1466
BsmFI	GGGAC	2 cut(s)	993, 1478
BsnI	GGCC	4 cut(s)	322, 846, 1117, 1674
BsoBI	CYCGRG	1 cut(s)	1311
Bsp143I	GATC	9 cut(s)	115, 184, 638, 1213, 1243, 1256, 1321, 1593, 1614
Bsp1720I	GCTNAGC	1 cut(s)	1134
Bsp68I	TCGCGA	1 cut(s)	1383
BspACI	CCGC	8 cut(s)	40, 43, 59, 62, 399, 935, 1073, 1270
BspANI	GGCC	4 cut(s)	322, 846, 1117, 1674
BspCNI	CTCAG	4 cut(s)	190, 934, 1054, 1126
BspFNI	CGCG	1 cut(s)	1383
BspLI	GGNNCC	5 cut(s)	1009, 1038, 1099, 1215, 1323
BspMI	ACCTGC	2 cut(s)	1006, 1614
BspPI	GGATC	7 cut(s)	646, 1208, 1221, 1251, 1264, 1316, 1329
BspQI	GCTCTTC	1 cut(s)	218
BspT107I	GGYRCC	2 cut(s)	1036, 1097
BsrBI	CCGCTC	1 cut(s)	937
BsrFI	RCCGGY	1 cut(s)	1458
BssAI	RCCGGY	1 cut(s)	1458
BssECI	CCNNGG	5 cut(s)	809, 962, 1105, 1360, 1521
BssMI	GATC	9 cut(s)	115, 184, 638, 1213, 1243, 1256, 1321, 1593, 1614
BssT1I	CCWWGG	1 cut(s)	1521
Bst2UI	CCWGG	7 cut(s)	468, 811, 912, 1106, 1166, 1362, 1698
Bst4CI	ACNGT	6 cut(s)	551, 577, 853, 1397, 1661, 1667
Bst6I	CTCTTC	2 cut(s)	218, 948
BstC8I	GCNNGC	2 cut(s)	40, 935
BstDEI	CTNAG	6 cut(s)	99, 198, 942, 1041, 1134, 1443
BstENI	CCTNNNNNAGG	1 cut(s)	532
BstF5I	GGATG	6 cut(s)	516, 877, 895, 1099, 1279, 1312
BstFNI	CGCG	1 cut(s)	1383
BstHHI	GCGC	1 cut(s)	169
BstKTI	GATC	9 cut(s)	118, 187, 641, 1216, 1246, 1259, 1324, 1596, 1617
BstMAI	GTCTC	4 cut(s)	84, 332, 963, 1466
BstMBI	GATC	9 cut(s)	115, 184, 638, 1213, 1243, 1256, 1321, 1593, 1614
BstNI	CCWGG	7 cut(s)	468, 811, 912, 1106, 1166, 1362, 1698
BstNSI	RCATGY	1 cut(s)	1210
BstPAI	GACNNNNGTC	1 cut(s)	924
BstSCI	CCNGG	9 cut(s)	172, 189, 466, 809, 910, 1104, 1164, 1360, 1696
BstUI	CGCG	1 cut(s)	1383
BstV1I	GCAGC	2 cut(s)	206, 1538
BstV2I	GAAGAC	2 cut(s)	375, 1445
BstX2I	RGATCY	4 cut(s)	638, 1213, 1256, 1321
BstXI	CCANNNNNNTGG	1 cut(s)	1031
BstYI	RGATCY	4 cut(s)	638, 1213, 1256, 1321
Bsu36I	CCTNAGG	1 cut(s)	1041
BsuI	GTATCC	2 cut(s)	497, 1058
BsuRI	GGCC	4 cut(s)	322, 846, 1117, 1674
BtsCI	GGATG	6 cut(s)	516, 877, 895, 1099, 1279, 1312
BtsI	GCAGTG	1 cut(s)	390
BtsIMutI	CAGTG	3 cut(s)	390, 414, 1402
BtuMI	TCGCGA	1 cut(s)	1383
BveI	ACCTGC	2 cut(s)	1006, 1614
Cac8I	GCNNGC	2 cut(s)	40, 935
CaiI	CAGNNNCTG	1 cut(s)	575
CfoI	GCGC	1 cut(s)	169
Cfr10I	RCCGGY	1 cut(s)	1458
Cfr13I	GGNCC	3 cut(s)	845, 1007, 1585
CsiI	ACCWGGT	1 cut(s)	466
Csp6I	GTAC	4 cut(s)	85, 203, 412, 596
CspAI	ACCGGT	1 cut(s)	1458
CviAII	CATG	4 cut(s)	493, 512, 949, 1207
CviQI	GTAC	4 cut(s)	85, 203, 412, 596
DdeI	CTNAG	6 cut(s)	99, 198, 942, 1041, 1134, 1443
DpnI	GATC	9 cut(s)	117, 186, 640, 1215, 1245, 1258, 1323, 1595, 1616
DpnII	GATC	9 cut(s)	115, 184, 638, 1213, 1243, 1256, 1321, 1593, 1614
EaeI	YGGCCR	2 cut(s)	1115, 1672
Eam1104I	CTCTTC	2 cut(s)	218, 948
EarI	CTCTTC	2 cut(s)	218, 948
EciI	GGCGGA	1 cut(s)	77
Eco130I	CCWWGG	1 cut(s)	1521
Eco47I	GGWCC	2 cut(s)	1007, 1585
Eco57I	CTGAAG	1 cut(s)	1497
Eco81I	CCTNAGG	1 cut(s)	1041
Eco88I	CYCGRG	1 cut(s)	1311
EcoNI	CCTNNNNNAGG	1 cut(s)	532
EcoRII	CCWGG	7 cut(s)	466, 809, 910, 1104, 1164, 1360, 1696
EcoT14I	CCWWGG	1 cut(s)	1521
ErhI	CCWWGG	1 cut(s)	1521
FaeI	CATG	4 cut(s)	496, 515, 952, 1210
FalI	AAGNNNNNCTT	2 cut(s)	967, 999
FaqI	GGGAC	2 cut(s)	993, 1478
FatI	CATG	4 cut(s)	492, 511, 948, 1206
FauI	CCCGC	3 cut(s)	47, 942, 1263
Fnu4HI	GCNGC	4 cut(s)	43, 60, 195, 1527
FokI	GGATG	6 cut(s)	503, 884, 902, 1106, 1286, 1319
Fsp4HI	GCNGC	4 cut(s)	43, 60, 195, 1527
FspBI	CTAG	2 cut(s)	354, 1632
GlaI	GCGC	1 cut(s)	168
GluI	GCNGC	4 cut(s)	43, 60, 195, 1527
GsuI	CTGGAG	1 cut(s)	1148
HaeIII	GGCC	4 cut(s)	322, 846, 1117, 1674
HapII	CCGG	4 cut(s)	71, 174, 190, 1459
HhaI	GCGC	1 cut(s)	169
Hin1II	CATG	4 cut(s)	496, 515, 952, 1210
Hin6I	GCGC	1 cut(s)	167
HinP1I	GCGC	1 cut(s)	167
HincII	GTYRAC	2 cut(s)	898, 1393
HindII	GTYRAC	2 cut(s)	898, 1393
HinfI	GANTC	5 cut(s)	827, 925, 956, 1228, 1708
HpaII	CCGG	4 cut(s)	71, 174, 190, 1459
HphI	GGTGA	3 cut(s)	254, 1448, 1673
Hpy166II	GTNNAC	5 cut(s)	412, 554, 898, 1393, 1436
Hpy188I	TCNGA	4 cut(s)	943, 966, 1339, 1351
Hpy188III	TCNNGA	9 cut(s)	125, 354, 658, 1043, 1151, 1232, 1370, 1382, 1471
Hpy8I	GTNNAC	5 cut(s)	412, 554, 898, 1393, 1436
Hpy99I	CGWCG	1 cut(s)	13
HpyAV	CCTTC	7 cut(s)	102, 643, 664, 757, 1234, 1297, 1642
HpyCH4III	ACNGT	6 cut(s)	551, 577, 853, 1397, 1661, 1667
HpyCH4V	TGCA	7 cut(s)	347, 532, 683, 1078, 1210, 1552, 1609
HpyF3I	CTNAG	6 cut(s)	99, 198, 942, 1041, 1134, 1443
Hsp92II	CATG	4 cut(s)	496, 515, 952, 1210
HspAI	GCGC	1 cut(s)	167
Kzo9I	GATC	9 cut(s)	115, 184, 638, 1213, 1243, 1256, 1321, 1593, 1614
LguI	GCTCTTC	1 cut(s)	218
LmnI	GCTCC	2 cut(s)	64, 103
Lsp1109I	GCAGC	2 cut(s)	206, 1538
LweI	GCATC	5 cut(s)	334, 368, 670, 1297, 1539
MabI	ACCWGGT	1 cut(s)	466
MaeI	CTAG	2 cut(s)	354, 1632
MaeIII	GTNAC	5 cut(s)	20, 571, 1355, 1397, 1661
MalI	GATC	9 cut(s)	117, 186, 640, 1215, 1245, 1258, 1323, 1595, 1616
MbiI	CCGCTC	1 cut(s)	937
MboI	GATC	9 cut(s)	115, 184, 638, 1213, 1243, 1256, 1321, 1593, 1614
MfeI	CAATTG	1 cut(s)	1292
MflI	RGATCY	4 cut(s)	638, 1213, 1256, 1321
MlsI	TGGCCA	2 cut(s)	1117, 1674
MluCI	AATT	5 cut(s)	143, 378, 606, 615, 1292
MluNI	TGGCCA	2 cut(s)	1117, 1674
MlyI	GAGTC	3 cut(s)	934, 965, 1222
MmeI	TCCRAC	1 cut(s)	1039
Mox20I	TGGCCA	2 cut(s)	1117, 1674
MroXI	GAANNNNTTC	1 cut(s)	694
MscI	TGGCCA	2 cut(s)	1117, 1674
MseI	TTAA	4 cut(s)	291, 489, 1202, 1266
Msp20I	TGGCCA	2 cut(s)	1117, 1674
MspA1I	CMGCKG	1 cut(s)	197
MspI	CCGG	4 cut(s)	71, 174, 190, 1459
MspR9I	CCNGG	9 cut(s)	174, 191, 468, 811, 912, 1106, 1166, 1362, 1698
MunI	CAATTG	1 cut(s)	1292
MvaI	CCWGG	7 cut(s)	468, 811, 912, 1106, 1166, 1362, 1698
MvnI	CGCG	1 cut(s)	1383
NciI	CCSGG	2 cut(s)	174, 191
NdeII	GATC	9 cut(s)	115, 184, 638, 1213, 1243, 1256, 1321, 1593, 1614
NlaIII	CATG	4 cut(s)	496, 515, 952, 1210
NlaIV	GGNNCC	5 cut(s)	1009, 1038, 1099, 1215, 1323
NmuCI	GTSAC	2 cut(s)	1397, 1661
NruI	TCGCGA	1 cut(s)	1383
NspI	RCATGY	1 cut(s)	1210
PciSI	GCTCTTC	1 cut(s)	218
PcsI	WCGNNNNNNNCGW	1 cut(s)	1567
PdmI	GAANNNNTTC	1 cut(s)	694
PfeI	GAWTC	2 cut(s)	827, 1708
PflFI	GACNNNGTC	1 cut(s)	7
PflMI	CCANNNNNTGG	1 cut(s)	329
PfoI	TCCNGGA	1 cut(s)	172
PinAI	ACCGGT	1 cut(s)	1458
PkrI	GCNGC	4 cut(s)	44, 61, 196, 1528
PleI	GAGTC	3 cut(s)	933, 964, 1222
PpsI	GAGTC	3 cut(s)	933, 964, 1222
PshAI	GACNNNNGTC	1 cut(s)	924
Psp6I	CCWGG	7 cut(s)	466, 809, 910, 1104, 1164, 1360, 1696
PspGI	CCWGG	7 cut(s)	466, 809, 910, 1104, 1164, 1360, 1696
PspN4I	GGNNCC	5 cut(s)	1009, 1038, 1099, 1215, 1323
PspPI	GGNCC	3 cut(s)	845, 1007, 1585
PstNI	CAGNNNCTG	1 cut(s)	575
PsuI	RGATCY	4 cut(s)	638, 1213, 1256, 1321
PsyI	GACNNNGTC	1 cut(s)	7
PvuII	CAGCTG	1 cut(s)	197
RruI	TCGCGA	1 cut(s)	1383
RsaI	GTAC	4 cut(s)	86, 204, 413, 597
RsaNI	GTAC	4 cut(s)	85, 203, 412, 596
SapI	GCTCTTC	1 cut(s)	218
SaqAI	TTAA	4 cut(s)	291, 489, 1202, 1266
SatI	GCNGC	4 cut(s)	43, 60, 195, 1527
Sau3AI	GATC	9 cut(s)	115, 184, 638, 1213, 1243, 1256, 1321, 1593, 1614
Sau96I	GGNCC	3 cut(s)	845, 1007, 1585
SchI	GAGTC	3 cut(s)	934, 965, 1222
ScrFI	CCNGG	9 cut(s)	174, 191, 468, 811, 912, 1106, 1166, 1362, 1698
SexAI	ACCWGGT	1 cut(s)	466
SfaNI	GCATC	5 cut(s)	334, 368, 670, 1297, 1539
SgrAI	CRCCGGYG	1 cut(s)	1458
SinI	GGWCC	2 cut(s)	1007, 1585
SmlI	CTYRAG	3 cut(s)	656, 922, 1230
SmoI	CTYRAG	3 cut(s)	656, 922, 1230
Sse9I	AATT	5 cut(s)	143, 378, 606, 615, 1292
SsiI	CCGC	8 cut(s)	40, 43, 59, 62, 399, 935, 1073, 1270
SspMI	CTAG	2 cut(s)	354, 1632
StyD4I	CCNGG	9 cut(s)	172, 189, 466, 809, 910, 1104, 1164, 1360, 1696
StyI	CCWWGG	1 cut(s)	1521
TaaI	ACNGT	6 cut(s)	551, 577, 853, 1397, 1661, 1667
TaqI	TCGA	3 cut(s)	11, 1246, 1470
TaqII	GACCGA	1 cut(s)	618
TasI	AATT	5 cut(s)	143, 378, 606, 615, 1292
TatI	WGTACW	2 cut(s)	84, 595
TauI	GCSGC	2 cut(s)	45, 62
TfiI	GAWTC	2 cut(s)	827, 1708
Tru1I	TTAA	4 cut(s)	291, 489, 1202, 1266
Tru9I	TTAA	4 cut(s)	291, 489, 1202, 1266
TscAI	CASTG	3 cut(s)	397, 414, 1402
TseFI	GTSAC	2 cut(s)	1397, 1661
TseI	GCWGC	2 cut(s)	194, 1526
Tsp45I	GTSAC	2 cut(s)	1397, 1661
TspDTI	ATGAA	8 cut(s)	372, 472, 1008, 1073, 1203, 1321, 1419, 1704
TspGWI	ACGGA	1 cut(s)	1077
TspRI	CASTG	3 cut(s)	397, 414, 1402
Tth111I	GACNNNGTC	1 cut(s)	7
Van91I	CCANNNNNTGG	1 cut(s)	329
VpaK11BI	GGWCC	2 cut(s)	1007, 1585
XagI	CCTNNNNNAGG	1 cut(s)	532
XapI	RAATTY	1 cut(s)	378
XbaI	TCTAGA	1 cut(s)	353
XceI	RCATGY	1 cut(s)	1210
XmnI	GAANNNNTTC	1 cut(s)	694
XspI	CTAG	2 cut(s)	354, 1632

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.