Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0006286

Physical Location & Seq

Genomic Coordinates Forward (+)

4331317 .. 4334019

Gene Structure 2703 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0055700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

ATGGCGTCACCCACTCCAGGAATCCTCCTCCGGCTCCTCCAGTCCATGAACTCCGCCACCAAAGTCACCGGCGACCACCGCTCCGCCCTCCTCCAAGTCATCGGCATCGTCCCCGCCCTCGCCGGCTCCGACGACCTCTGGCCCAACCAAGGCTTCTACGTCCAGCTCTCCGACTCCCTCAACTCCACCTACGTCTCCCTATCGGAGAAAGACACCGATCTCATCCTCGCCAACCGCCTCCAGCTCGGCCAGTTCGTCTACGTCGACCGCTTCGATTTCGACTCCCCAGTGCCGCGGGTCTCCGGAATCCGCCCCATCGCGGGCCGCCACCCCTTCGTCGGCGCCCCGGAGCCGCTGGTGGCGCAGATCTCGGCGTCTAAGAGGGAGTTCGTGATCAAGCCAGTGTCGGATTCCGACCAGTCCGCCGATTTCATGGCGATTTATCTGTCCAAGAAGCAGGATCAGCCGGCCGTCAGGACGGAGGCGAAGACCGAGAAGGGAAGATCACCGCAGCGGCGGCAGCCGTTTGCGAATAGAGAGAATGTTAATGTGGGAGGGAATGTGAATTCCGACGAGGCGAAGAAGGTCTCTGATCGGCCGGTGGCGGCGAGATTCTCATCTCCGGCCACCGCAAAGAGGTCTGCTTCAGCGGGGAAGAAGAATGTGGCTGTACCTCCGGCGGAGAGGGATCCATCGCCGGCCGGAAAAGGAAAGAGATCGTCGTCTCCGGCACCGTCGAAATGTGTGGTTCCGAGCTTGATGGTGGCGCGTGAAGAGAATCGGAAGGTGGCTAAGGAGCCCTCGATTATTGTGCCGTCGAGGTACCGGCAGCCGTCGCCAATTGGGCGGAGGCAGGCGTCGCCGAATCCCCGAAGAGCTTCCATTTCTCCAGGGAGGAGATTGTCTGTTGGGGGAGCGAAGGACTCTGCTGCAAGGAAGAAAATGGCTACAATTGTTGCCGGAATTTCGAAGATCTCGGATTCAATTGCGGGGTCTGGTAAGAATAACCGGAAGGGATGGGACGACGAGTCGCCTGCGGTGCAGCAAAAGGAGAAGCCTGTGTCAAAGAACAAACCGGATGTGCAAGCAATTTTGCGAACTCAGGCTGCCCTTTCGAGAAGATTAAGTGATGCAAAAACAACAAGTGATGATTGTTCAAGTGTGAAATCGAAGGCTAGCTCACATGAAGATTACCCGGTCCAAGAGAAGCCAAGCTATGCAGCTCTGGGGATCACTGTTCATGAAAGGAAGTGGACTGATGGTAGTGTTCGATTAGATGGAGTCTCTGCAGACCTTGCAAGACTTGGAAAGGAAGCTATGCAAAGGAAGGCACTTGCTGCCACAGCTGCAGCCGAAGCACTAGAGGAGGCGATTGCAACGGAGTCTCTTGTCAGGAAATTAAGCATGTTTGCAGAACTGTCGTCCACATCAAAGGTTGGGAACCCTTTACCTGCCATTGACCGGTTCTTTTCGATTTATGATGATGTTGTTAAATCAACAACAACTCTAGAATCAATTGCCTGCAACCGCAATTCTGATGCACCTTATGATAACATTCCAACTGAGCAATCAAAATCAGTTTCTCTTTGGGTTGAAGCTGCCTTGGCTACTGATCTTGGAGTTGTCTCTCTTCTTAGCCCCCAAGATCATGAGTCTCCACCCACTCTGCAGAAAAGTTTGTCAAAACGACAATCTCTCAACGCACCTGCCAAAGCTAATTTGAAGATTTCTTCTTTGTCGCCCCAGTCCAATGCTCATGTTGGGGATTGGAAGAAGGGAAATGGAATGAGAGAGACGGTTGAGCTTGCAAAGAACTTGCAGTCGGAGATGCAAATGTGGTTTCTACAGTTTGTTGAGAAAGCCATGGATGCTGGTTTTCGGGTGTTTGGAGAGTGCGCTGCAGATGGTGTTAAGTTACCTCTAGACTGTGGCTCCATTGCAGCTGTCTTGTCACAGTTGAAGCGAGTTAATGAGTGGTTGGATCGAGCCGTATCCAAAAGGGATGATCTACTGAGTGAAAAGGTTGATCGGCTCAAGAGAAAGATCTATGGCTTTGTTATTCAACATGTTGGGACGACATTTGACAATTCCTCACCTCTTGCTTCATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000075 GO:0000278 GO:0000375 GO:0000377 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007049 GO:0007088 GO:0007093 GO:0007094 GO:0007346 GO:0008104 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010564 GO:0010639 GO:0010948 GO:0010965 GO:0016070 GO:0016071 GO:0022402 GO:0030071 GO:0031577 GO:0031974 GO:0031981 GO:0032991 GO:0033036 GO:0033043 GO:0033044 GO:0033045 GO:0033046 GO:0033047 GO:0033048 GO:0033365 GO:0034501 GO:0034502 GO:0034613 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045786 GO:0045839 GO:0045841 GO:0045930 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051129 GO:0051179 GO:0051641 GO:0051726 GO:0051783 GO:0051784 GO:0051983 GO:0051985 GO:0065007 GO:0070013 GO:0070727 GO:0071005 GO:0071011 GO:0071173 GO:0071174 GO:0071459 GO:0071704 GO:0090304 GO:1901360 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902099 GO:1902100 GO:1903047 GO:1905818 GO:1905819 GO:1990904 GO:2000816 GO:2001251

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RED_C RED_N

Protein Analysis

703

Amino Acids

76.03

Weight (kDa)

9.63

Isoelectric Point (pI)

57.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF936	PF06075	5 - 121	4.2e-53	Plant protein of unknown function (DUF936)
DUF6857	PF21647	412 - 696	1e-96	Domain of unknown function (DUF6857)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006286)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26460
fragaria_vesca	FvH4_1g09440 FvH4_1g09440 FvH4_1g09440 FvH4_1g09440 FvH4_1g09440 FvH4_1g09440
malus_domestica	MD02G1102700.v1.1 MD15G1223900.v1.1
prunus_persica	Prupe.7G191600_v2.0.a1 Prupe.7G191600_v2.0.a1
pyrus_communis	pycom02g08040 pycom15g19810
rosa_chinensis	RchiOBHm_Chr2g0095991
rosa_laevigata	RLG00000016615 RLG00000016631
rosa_multiflora	Rmu_sc0002497.1_g000011 Rmu_sc0018414.1_g000005
rosa_roxburghii	Rroxscaffold_2G00145880
rosa_rugosa	Rorug02G0055700 Rorug02G0055800 Rorug02G0065300
rosa_samantha	Rh2AG103600 Rh2BG105100 Rh2CG107600 Rh2DG105500
rosa_wichuraiana	Rw2G007900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1714
Acc36I	ACCTGC	2 cut(s)	1459, 1714
Acc65I	GGTACC	1 cut(s)	822
AccB1I	GGYRCC	3 cut(s)	341, 730, 822
AccBSI	CCGCTC	1 cut(s)	81
AccI	GTMKAC	2 cut(s)	258, 264
AccII	CGCG	3 cut(s)	295, 320, 769
AccIII	TCCGGA	1 cut(s)	302
AclWI	GGATC	5 cut(s)	468, 683, 696, 1238, 1989
AcoI	YGGCCR	5 cut(s)	247, 468, 596, 624, 699
AcsI	RAATTY	2 cut(s)	565, 963
AcuI	CTGAAG	1 cut(s)	630
AcyI	GRCGYC	4 cut(s)	5, 342, 374, 857
AfaI	GTAC	2 cut(s)	672, 824
AfiI	CCNNNNNNNGG	7 cut(s)	17, 149, 319, 320, 338, 636, 1461
AflIII	ACRYGT	1 cut(s)	2065
AgeI	ACCGGT	1 cut(s)	1461
AgsI	TTSAA	6 cut(s)	984, 1158, 1595, 1723, 1960, 2063
AhdI	GACNNNNNGTC	1 cut(s)	1027
AjnI	CCWGG	2 cut(s)	16, 889
AjuI	GAANNNNNNNTTGG	2 cut(s)	137, 169
Alw26I	GTCTC	9 cut(s)	199, 304, 592, 729, 1288, 1389, 1630, 1659, 1787
AlwI	GGATC	5 cut(s)	468, 683, 696, 1238, 1989
Aor13HI	TCCGGA	1 cut(s)	302
AoxI	GGCC	7 cut(s)	140, 247, 322, 468, 596, 624, 699
ApoI	RAATTY	2 cut(s)	565, 963
AsiGI	ACCGGT	1 cut(s)	1461
Asp700I	GAANNNNTTC	1 cut(s)	877
Asp718I	GGTACC	1 cut(s)	822
AspLEI	GCGC	4 cut(s)	344, 364, 769, 1898
AspS9I	GGNCC	3 cut(s)	141, 322, 1198
AsuC2I	CCSGG	2 cut(s)	347, 1196
AsuHPI	GGTGA	3 cut(s)	58, 498, 2085
AsuII	TTCGAA	1 cut(s)	968
AsuNHI	GCTAGC	1 cut(s)	1175
AvaII	GGWCC	1 cut(s)	1198
BamHI	GGATCC	1 cut(s)	688
BanI	GGYRCC	3 cut(s)	341, 730, 822
BanII	GRGCYC	1 cut(s)	801
BbsI	GAAGAC	1 cut(s)	494
BccI	CCATC	7 cut(s)	323, 700, 754, 1011, 1253, 1271, 1898
BceAI	ACGGC	5 cut(s)	455, 508, 799, 817, 1973
BcgI	CGANNNNNNTGC	6 cut(s)	793, 827, 1016, 1050, 1401, 1435
BciT130I	CCWGG	2 cut(s)	18, 891
BciVI	GTATCC	1 cut(s)	2002
BclI	TGATCA	1 cut(s)	393
BcnI	CCSGG	2 cut(s)	347, 1196
BcoDI	GTCTC	9 cut(s)	199, 304, 592, 729, 1288, 1389, 1630, 1659, 1787
BfaI	CTAG	4 cut(s)	1176, 1361, 1508, 1922
BfmI	CTRYAG	5 cut(s)	1287, 1347, 1667, 1844, 1899
BfoI	RGCGCY	1 cut(s)	345
BfuAI	ACCTGC	2 cut(s)	1459, 1714
BfuI	GTATCC	1 cut(s)	2002
BglI	GCCNNNNNGGC	1 cut(s)	844
BglII	AGATCT	3 cut(s)	366, 972, 2043
Bme1390I	CCNGG	4 cut(s)	18, 347, 891, 1196
Bme18I	GGWCC	1 cut(s)	1198
BmeRI	GACNNNNNGTC	1 cut(s)	1027
BmgT120I	GGNCC	3 cut(s)	141, 322, 1198
BmrFI	CCNGG	4 cut(s)	18, 347, 891, 1196
BmrI	ACTGGG	2 cut(s)	281, 1738
BmsI	GCATC	5 cut(s)	114, 1120, 1528, 1818, 1858
BmtI	GCTAGC	1 cut(s)	1179
BmuI	ACTGGG	2 cut(s)	281, 1738
BpiI	GAAGAC	1 cut(s)	494
BpmI	CTGGAG	3 cut(s)	23, 224, 873
Bpu10I	CCTNAGC	1 cut(s)	792
Bpu14I	TTCGAA	1 cut(s)	968
BpuEI	CTTGAG	1 cut(s)	2018
BpuMI	CCSGG	2 cut(s)	347, 1196
BsaBI	GATNNNNATC	1 cut(s)	616
BsaHI	GRCGYC	4 cut(s)	5, 342, 374, 857
BsaI	GGTCTC	2 cut(s)	304, 592
BsaJI	CCNNGG	6 cut(s)	148, 293, 345, 890, 1602, 1863
BsaWI	WCCGGW	4 cut(s)	302, 1008, 1075, 1461
BsaXI	ACNNNNNCTCC	6 cut(s)	65, 95, 546, 576, 1916, 1946
Bsc4I	CCNNNNNNNGG	7 cut(s)	17, 149, 319, 320, 338, 636, 1461
Bse118I	RCCGGY	7 cut(s)	68, 122, 466, 598, 697, 825, 1461
Bse1I	ACTGG	6 cut(s)	40, 250, 287, 401, 418, 1744
Bse3DI	GCAATG	1 cut(s)	1935
Bse8I	GATNNNNATC	1 cut(s)	616
BseAI	TCCGGA	1 cut(s)	302
BseBI	CCWGG	2 cut(s)	18, 891
BseDI	CCNNGG	6 cut(s)	148, 293, 345, 890, 1602, 1863
BseGI	GGATG	5 cut(s)	222, 1022, 1084, 1873, 2008
BseJI	GATNNNNATC	1 cut(s)	616
BseLI	CCNNNNNNNGG	7 cut(s)	17, 149, 319, 320, 338, 636, 1461
BseMI	GCAATG	1 cut(s)	1935
BseMII	CTCAG	3 cut(s)	1115, 1554, 2003
BseNI	ACTGG	6 cut(s)	40, 250, 287, 401, 418, 1744
BseRI	GAGGAG	5 cut(s)	17, 26, 80, 910, 1379
BseX3I	CGGCCG	3 cut(s)	468, 596, 699
BsgI	GTGCAG	1 cut(s)	1061
Bsh1236I	CGCG	3 cut(s)	295, 320, 769
Bsh1285I	CGRYCG	4 cut(s)	268, 471, 599, 702
BshFI	GGCC	7 cut(s)	142, 249, 324, 470, 598, 626, 701
BshNI	GGYRCC	3 cut(s)	341, 730, 822
BshTI	ACCGGT	1 cut(s)	1461
BsiEI	CGRYCG	4 cut(s)	268, 471, 599, 702
BslFI	GGGAC	3 cut(s)	95, 1034, 2086
BslI	CCNNNNNNNGG	7 cut(s)	17, 149, 319, 320, 338, 636, 1461
BsmAI	GTCTC	9 cut(s)	199, 304, 592, 729, 1288, 1389, 1630, 1659, 1787
BsmBI	CGTCTC	3 cut(s)	199, 729, 1787
BsmFI	GGGAC	3 cut(s)	95, 1034, 2086
BsnI	GGCC	7 cut(s)	142, 249, 324, 470, 598, 626, 701
Bso31I	GGTCTC	2 cut(s)	304, 592
Bsp119I	TTCGAA	1 cut(s)	968
Bsp1286I	GDGCHC	1 cut(s)	801
Bsp13I	TCCGGA	1 cut(s)	302
Bsp19I	CCATGG	1 cut(s)	1863
BspANI	GGCC	7 cut(s)	142, 249, 324, 470, 598, 626, 701
BspCNI	CTCAG	3 cut(s)	1114, 1555, 2004
BspEI	TCCGGA	1 cut(s)	302
BspFNI	CGCG	3 cut(s)	295, 320, 769
BspHI	TCATGA	2 cut(s)	1240, 1648
BspMAI	CTGCAG	4 cut(s)	1291, 1351, 1671, 1903
BspMI	ACCTGC	2 cut(s)	1459, 1714
BspOI	GCTAGC	1 cut(s)	1179
BspPI	GGATC	5 cut(s)	468, 683, 696, 1238, 1989
BspQI	GCTCTTC	1 cut(s)	868
BspT104I	TTCGAA	1 cut(s)	968
BspT107I	GGYRCC	3 cut(s)	341, 730, 822
BspTNI	GGTCTC	2 cut(s)	304, 592
BsrBI	CCGCTC	1 cut(s)	81
BsrDI	GCAATG	1 cut(s)	1935
BsrFI	RCCGGY	7 cut(s)	68, 122, 466, 598, 697, 825, 1461
BsrI	ACTGG	6 cut(s)	40, 250, 287, 401, 418, 1744
BssAI	RCCGGY	7 cut(s)	68, 122, 466, 598, 697, 825, 1461
BssECI	CCNNGG	6 cut(s)	148, 293, 345, 890, 1602, 1863
BssNI	GRCGYC	4 cut(s)	5, 342, 374, 857
BssT1I	CCWWGG	3 cut(s)	148, 1602, 1863
Bst2UI	CCWGG	2 cut(s)	18, 891
Bst4CI	ACNGT	7 cut(s)	735, 1237, 1419, 1798, 1848, 1928, 1956
Bst6I	CTCTTC	3 cut(s)	768, 868, 1635
BstACI	GRCGYC	4 cut(s)	5, 342, 374, 857
BstAPI	GCANNNNNTGC	2 cut(s)	1295, 1337
BstBI	TTCGAA	1 cut(s)	968
BstDEI	CTNAG	6 cut(s)	378, 792, 1101, 1563, 1634, 2012
BstDSI	CCRYGG	2 cut(s)	293, 1863
BstF5I	GGATG	5 cut(s)	222, 1022, 1084, 1873, 2008
BstFNI	CGCG	3 cut(s)	295, 320, 769
BstH2I	RGCGCY	1 cut(s)	345
BstHHI	GCGC	4 cut(s)	344, 364, 769, 1898
BstMAI	GTCTC	9 cut(s)	199, 304, 592, 729, 1288, 1389, 1630, 1659, 1787
BstMCI	CGRYCG	4 cut(s)	268, 471, 599, 702
BstNI	CCWGG	2 cut(s)	18, 891
BstNSI	RCATGY	2 cut(s)	1408, 2069
BstSCI	CCNGG	4 cut(s)	16, 345, 889, 1194
BstSFI	CTRYAG	5 cut(s)	1287, 1347, 1667, 1844, 1899
BstUI	CGCG	3 cut(s)	295, 320, 769
BstV2I	GAAGAC	1 cut(s)	494
BstX2I	RGATCY	4 cut(s)	366, 688, 972, 2043
BstYI	RGATCY	4 cut(s)	366, 688, 972, 2043
BstZI	CGGCCG	3 cut(s)	468, 596, 699
BsuI	GTATCC	1 cut(s)	2002
BsuRI	GGCC	7 cut(s)	142, 249, 324, 470, 598, 626, 701
BtgI	CCRYGG	2 cut(s)	293, 1863
BtgZI	GCGATG	2 cut(s)	301, 678
BtsCI	GGATG	5 cut(s)	222, 1022, 1084, 1873, 2008
BtsIMutI	CAGTG	3 cut(s)	294, 408, 1233
BveI	ACCTGC	2 cut(s)	1459, 1714
CciI	TCATGA	2 cut(s)	1240, 1648
CfoI	GCGC	4 cut(s)	344, 364, 769, 1898
Cfr10I	RCCGGY	7 cut(s)	68, 122, 466, 598, 697, 825, 1461
Cfr13I	GGNCC	3 cut(s)	141, 322, 1198
Cfr42I	CCGCGG	1 cut(s)	296
CseI	GACGC	2 cut(s)	363, 846
Csp6I	GTAC	2 cut(s)	671, 823
CspAI	ACCGGT	1 cut(s)	1461
CviAII	CATG	9 cut(s)	46, 433, 1184, 1241, 1405, 1649, 1757, 1864, 2066
CviQI	GTAC	2 cut(s)	671, 823
DdeI	CTNAG	6 cut(s)	378, 792, 1101, 1563, 1634, 2012
DinI	GGCGCC	1 cut(s)	343
DriI	GACNNNNNGTC	1 cut(s)	1027
EaeI	YGGCCR	5 cut(s)	247, 468, 596, 624, 699
EagI	CGGCCG	3 cut(s)	468, 596, 699
Eam1104I	CTCTTC	3 cut(s)	768, 868, 1635
Eam1105I	GACNNNNNGTC	1 cut(s)	1027
EarI	CTCTTC	3 cut(s)	768, 868, 1635
EciI	GGCGGA	6 cut(s)	43, 73, 299, 412, 695, 862
EclXI	CGGCCG	3 cut(s)	468, 596, 699
Eco130I	CCWWGG	3 cut(s)	148, 1602, 1863
Eco24I	GRGCYC	1 cut(s)	801
Eco31I	GGTCTC	2 cut(s)	304, 592
Eco47I	GGWCC	1 cut(s)	1198
Eco52I	CGGCCG	3 cut(s)	468, 596, 699
Eco57I	CTGAAG	1 cut(s)	630
EcoRI	GAATTC	1 cut(s)	565
EcoRII	CCWGG	2 cut(s)	16, 889
EcoT14I	CCWWGG	3 cut(s)	148, 1602, 1863
EcoT38I	GRGCYC	1 cut(s)	801
EgeI	GGCGCC	1 cut(s)	343
EheI	GGCGCC	1 cut(s)	343
ErhI	CCWWGG	3 cut(s)	148, 1602, 1863
Esp3I	CGTCTC	3 cut(s)	199, 729, 1787
FaeI	CATG	9 cut(s)	49, 436, 1187, 1244, 1408, 1652, 1760, 1867, 2069
FaqI	GGGAC	3 cut(s)	95, 1034, 2086
FatI	CATG	9 cut(s)	45, 432, 1183, 1240, 1404, 1648, 1756, 1863, 2065
FauI	CCCGC	5 cut(s)	121, 288, 313, 643, 982
FbaI	TGATCA	1 cut(s)	393
FblI	GTMKAC	2 cut(s)	258, 264
FokI	GGATG	5 cut(s)	209, 1029, 1091, 1880, 2015
FriOI	GRGCYC	1 cut(s)	801
FspBI	CTAG	4 cut(s)	1176, 1361, 1508, 1922
GlaI	GCGC	4 cut(s)	343, 363, 768, 1897
GsuI	CTGGAG	3 cut(s)	23, 224, 873
HaeII	RGCGCY	1 cut(s)	345
HaeIII	GGCC	7 cut(s)	142, 249, 324, 470, 598, 626, 701
HgaI	GACGC	2 cut(s)	363, 846
HhaI	GCGC	4 cut(s)	344, 364, 769, 1898
Hin1I	GRCGYC	4 cut(s)	5, 342, 374, 857
Hin1II	CATG	9 cut(s)	49, 436, 1187, 1244, 1408, 1652, 1760, 1867, 2069
Hin6I	GCGC	4 cut(s)	342, 362, 767, 1896
HinP1I	GCGC	4 cut(s)	342, 362, 767, 1896
HincII	GTYRAC	1 cut(s)	265
HindII	GTYRAC	1 cut(s)	265
HphI	GGTGA	3 cut(s)	58, 498, 2085
Hpy166II	GTNNAC	4 cut(s)	259, 265, 1254, 1425
Hpy8I	GTNNAC	4 cut(s)	259, 265, 1254, 1425
HpyAV	CCTTC	9 cut(s)	343, 490, 577, 778, 913, 1006, 1165, 1321, 1768
HpyCH4III	ACNGT	7 cut(s)	735, 1237, 1419, 1798, 1848, 1928, 1956
HpyCH4IV	ACGT	3 cut(s)	159, 192, 261
HpyF3I	CTNAG	6 cut(s)	378, 792, 1101, 1563, 1634, 2012
HpySE526I	ACGT	3 cut(s)	159, 192, 261
Hsp92I	GRCGYC	4 cut(s)	5, 342, 374, 857
Hsp92II	CATG	9 cut(s)	49, 436, 1187, 1244, 1408, 1652, 1760, 1867, 2069
HspAI	GCGC	4 cut(s)	342, 362, 767, 1896
KasI	GGCGCC	1 cut(s)	341
Kpn2I	TCCGGA	1 cut(s)	302
KpnI	GGTACC	1 cut(s)	826
KroI	GCCGGC	3 cut(s)	122, 466, 697
KroNI	GCCGGC	3 cut(s)	124, 468, 699
Ksp22I	TGATCA	1 cut(s)	393
KspI	CCGCGG	1 cut(s)	296
LguI	GCTCTTC	1 cut(s)	868
LmnI	GCTCC	7 cut(s)	39, 86, 131, 349, 796, 914, 1937
LweI	GCATC	5 cut(s)	114, 1120, 1528, 1818, 1858
MaeI	CTAG	4 cut(s)	1176, 1361, 1508, 1922
MaeII	ACGT	3 cut(s)	159, 192, 261
MaeIII	GTNAC	4 cut(s)	6, 64, 1914, 1950
MbiI	CCGCTC	1 cut(s)	81
MfeI	CAATTG	4 cut(s)	840, 951, 984, 1515
MflI	RGATCY	4 cut(s)	366, 688, 972, 2043
MhlI	GDGCHC	1 cut(s)	801
Mly113I	GGCGCC	1 cut(s)	342
MlyI	GAGTC	7 cut(s)	167, 275, 917, 1037, 1290, 1391, 1661
MmeI	TCCRAC	8 cut(s)	153, 195, 387, 438, 594, 1583, 1803, 1959
MroI	TCCGGA	1 cut(s)	302
MroNI	GCCGGC	3 cut(s)	122, 466, 697
MroXI	GAANNNNTTC	1 cut(s)	877
MseI	TTAA	6 cut(s)	546, 1124, 1400, 1491, 1911, 1968
MspA1I	CMGCKG	6 cut(s)	295, 355, 514, 650, 1346, 1943
MspR9I	CCNGG	4 cut(s)	18, 347, 891, 1196
MunI	CAATTG	4 cut(s)	840, 951, 984, 1515
MvaI	CCWGG	2 cut(s)	18, 891
MvnI	CGCG	3 cut(s)	295, 320, 769
NaeI	GCCGGC	3 cut(s)	124, 468, 699
NarI	GGCGCC	1 cut(s)	342
NciI	CCSGG	2 cut(s)	347, 1196
NcoI	CCATGG	1 cut(s)	1863
NgoMIV	GCCGGC	3 cut(s)	122, 466, 697
NheI	GCTAGC	1 cut(s)	1175
NlaIII	CATG	9 cut(s)	49, 436, 1187, 1244, 1408, 1652, 1760, 1867, 2069
NmeAIII	GCCGAG	2 cut(s)	225, 350
NmuCI	GTSAC	3 cut(s)	6, 64, 1950
NspI	RCATGY	2 cut(s)	1408, 2069
NspV	TTCGAA	1 cut(s)	968
PagI	TCATGA	2 cut(s)	1240, 1648
PaqCI	CACCTGC	1 cut(s)	1714
PciI	ACATGT	1 cut(s)	2065
PciSI	GCTCTTC	1 cut(s)	868
PcsI	WCGNNNNNNNCGW	4 cut(s)	126, 252, 261, 270
PdiI	GCCGGC	3 cut(s)	124, 468, 699
PdmI	GAANNNNTTC	1 cut(s)	877
PfeI	GAWTC	8 cut(s)	21, 306, 410, 612, 778, 865, 980, 1511
PfoI	TCCNGGA	1 cut(s)	16
PinAI	ACCGGT	1 cut(s)	1461
PleI	GAGTC	7 cut(s)	167, 275, 917, 1036, 1289, 1390, 1660
PluTI	GGCGCC	1 cut(s)	345
PpsI	GAGTC	7 cut(s)	167, 275, 917, 1036, 1289, 1390, 1660
PscI	ACATGT	1 cut(s)	2065
Psp6I	CCWGG	2 cut(s)	16, 889
PspGI	CCWGG	2 cut(s)	16, 889
PspPI	GGNCC	3 cut(s)	141, 322, 1198
PstI	CTGCAG	4 cut(s)	1291, 1351, 1671, 1903
PsuI	RGATCY	4 cut(s)	366, 688, 972, 2043
PvuII	CAGCTG	2 cut(s)	1346, 1943
RsaI	GTAC	2 cut(s)	672, 824
RsaNI	GTAC	2 cut(s)	671, 823
SacII	CCGCGG	1 cut(s)	296
SalI	GTCGAC	1 cut(s)	263
SapI	GCTCTTC	1 cut(s)	868
SaqAI	TTAA	6 cut(s)	546, 1124, 1400, 1491, 1911, 1968
Sau96I	GGNCC	3 cut(s)	141, 322, 1198
SchI	GAGTC	7 cut(s)	167, 275, 917, 1037, 1290, 1391, 1661
ScrFI	CCNGG	4 cut(s)	18, 347, 891, 1196
SduI	GDGCHC	1 cut(s)	801
SfaNI	GCATC	5 cut(s)	114, 1120, 1528, 1818, 1858
SfcI	CTRYAG	5 cut(s)	1287, 1347, 1667, 1844, 1899
SfoI	GGCGCC	1 cut(s)	343
Sfr303I	CCGCGG	1 cut(s)	296
SfuI	TTCGAA	1 cut(s)	968
SgrAI	CRCCGGYG	1 cut(s)	68
SgrBI	CCGCGG	1 cut(s)	296
SinI	GGWCC	1 cut(s)	1198
SmlI	CTYRAG	1 cut(s)	2033
SmoI	CTYRAG	1 cut(s)	2033
SspDI	GGCGCC	1 cut(s)	341
SspMI	CTAG	4 cut(s)	1176, 1361, 1508, 1922
StyD4I	CCNGG	4 cut(s)	16, 345, 889, 1194
StyI	CCWWGG	3 cut(s)	148, 1602, 1863
TaaI	ACNGT	7 cut(s)	735, 1237, 1419, 1798, 1848, 1928, 1956
TaiI	ACGT	3 cut(s)	162, 195, 264
TaqII	GACCGA	1 cut(s)	506
TauI	GCSGC	6 cut(s)	295, 327, 355, 517, 520, 608
TfiI	GAWTC	8 cut(s)	21, 306, 410, 612, 778, 865, 980, 1511
Tru1I	TTAA	6 cut(s)	546, 1124, 1400, 1491, 1911, 1968
Tru9I	TTAA	6 cut(s)	546, 1124, 1400, 1491, 1911, 1968
TscAI	CASTG	3 cut(s)	294, 408, 1240
TseFI	GTSAC	3 cut(s)	6, 64, 1950
Tsp45I	GTSAC	3 cut(s)	6, 64, 1950
TspDTI	ATGAA	6 cut(s)	62, 421, 1200, 1229, 1257, 2094
TspGWI	ACGGA	2 cut(s)	494, 1394
TspRI	CASTG	3 cut(s)	294, 408, 1240
VpaK11BI	GGWCC	1 cut(s)	1198
XapI	RAATTY	2 cut(s)	565, 963
XbaI	TCTAGA	2 cut(s)	1507, 1921
XceI	RCATGY	2 cut(s)	1408, 2069
XmiI	GTMKAC	2 cut(s)	258, 264
XmnI	GAANNNNTTC	1 cut(s)	877
XspI	CTAG	4 cut(s)	1176, 1361, 1508, 1922

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.