Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0006286

Physical Location & Seq

Genomic Coordinates Reverse (-)

83734730 .. 83738724

Gene Structure 3995 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00145880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGAAGTCCTCAAAGAAACACTACAAGGATAAAGTCGTTCGCCGCAAAGAGGAGAAAGCAGAGCAACCGGAGTTGCCGAAATACAGAGACAGAGCCAAGGAGAGGAGAGATGATCAGAACCCTGATTATGAGGCCAATGAGTTGGGTTCTTTTCATGCCGTTGCGCCGCCGGGGAATGTTGATCTCGGGGCAGCTGATGTGCACAAGTTGTCAATCGAGAAGAGCAAGTATCTCGGAGGTGATCTGGAACACACGCATTTGGTGAAAGGATTGGATTATGCCTTACTTACCAAAGTAAGAAGTGAGATTGATAAGAAGCCAGATGTTGGAGATGAGGCTGATGCGAAATCTAGAGCATCTAAGGAAGACCAAAAAGTGTCATTTCGAACAGCAACTGCAAAGTCAGTCTATCAATGGATAGTTAAGCCCCAGACTGTTATCAAAACCAACGAGATGTTCCTGCCTGGTAGATTGTCATTTATTTTTAACATGGAGGGTGGATACACTCATGACATTCCTACGACCTTGCATAGGAGTAAAGCCGACTGTCCACAGCCGGAGGAAATGGCAACTGTCAGTTTTGATGGTGTTGTACTTGAAAAAATTTCTGCAAGTATGTCATATCTTCGTGTTGGATCTTCTGGGAAGGCTGCCAAGAAGAAAAAGAAGGGGAAAGATGCAAAAGTTACAGGAAAGATTTTAGTTGGTAATGGATATGCGGAAGAGGATAAACCCTTGAAGCCTGATATTGGGGTTGTGAAGAATGAAACTAAAAGAGAGATTTTGCCCCCACCTCCACCTCTTCCCAGGAAAACGCATATAGATTTGCAAGAAAAACAAGGCCCAACTATTGCACGAGCAGATGAGGATGACATTTTTGTAGGTGATGGTGTTGACTATGCTATTCCTGGTAAAGATTTGAGCCAAAGCCCTCTCTCGGAGGACATGGAAGAGTCTCCCAGGGCCAAAGAAAAAGTTTCTTATTTTGATGAACCGGCTTATGGTCCTGTCCAACCCTATGGGCTGCCTAATGAATGGCAAGAAACGAATGGATACGATGCGACCACACAACAACCAATGGTTGGCCCCTACCAAGGAGACTGGCAGGAATACCAATATGGTGAGCAAGTGGCTTATCCTGAACAGTACCTCCAGCCAAATATGGAGGGTTACGATGTGCAAGAAGGTCTAATACAAGATCCACGCTTTATGACTCAAGAAGAGAAGGATAGGGGTTTAGGCTCTGTGTTTAAGCGGGATGACCAAAGACTTCAACAATTGAGGGAGAAAGATGCTCGAGAAAAGGATCCCAACTTTATCTCAGAGAGTTATTCTGAATGTTACCCGGGCTATCAAGAATATAATCGTGAGGTTGTTGACAGCGATGATGAGGATGACTTGTCAAAAATGGACATGGGTGGACGAGCCAAGGGTCGTCTTCATCGGTGGGACTTTGAGACAGAAGAAGAATGGGCAACATACAATGAACAGAAGGAGGCTATGCCTAAGGCAGCATTCCAGTTTGGTGTGAAGATGCAAGATGGTCGAAAGACACGAAAGCAAAACAAGGACCAGAAGATCAATAATGATCTGAACAGGATCAACAAGATACTTGCTAGAAAGAAGTCAGAGAAGGATGGGGATGATGATGGTGGCCATTACGATGAAGATGTACAGCCTGGCAAGAAACTTAGAGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000075 GO:0000278 GO:0000375 GO:0000377 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007049 GO:0007088 GO:0007093 GO:0007094 GO:0007346 GO:0008104 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010564 GO:0010639 GO:0010948 GO:0010965 GO:0016070 GO:0016071 GO:0022402 GO:0030071 GO:0031577 GO:0031974 GO:0031981 GO:0032991 GO:0033036 GO:0033043 GO:0033044 GO:0033045 GO:0033046 GO:0033047 GO:0033048 GO:0033365 GO:0034501 GO:0034502 GO:0034613 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045786 GO:0045839 GO:0045841 GO:0045930 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051129 GO:0051179 GO:0051641 GO:0051726 GO:0051783 GO:0051784 GO:0051983 GO:0051985 GO:0065007 GO:0070013 GO:0070727 GO:0071005 GO:0071011 GO:0071173 GO:0071174 GO:0071459 GO:0071704 GO:0090304 GO:1901360 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902099 GO:1902100 GO:1903047 GO:1905818 GO:1905819 GO:1990904 GO:2000816 GO:2001251

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RED_C RED_N

Protein Analysis

566

Amino Acids

64.48

Weight (kDa)

5.48

Isoelectric Point (pI)

44.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RED_N	PF07808	5 - 222	6.3e-80	RED-like protein N-terminal region
RED_C	PF07807	444 - 550	2.5e-43	RED-like protein C-terminal region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006286)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26460
fragaria_vesca	FvH4_1g09440 FvH4_1g09440 FvH4_1g09440 FvH4_1g09440 FvH4_1g09440 FvH4_1g09440
malus_domestica	MD02G1102700.v1.1 MD15G1223900.v1.1
prunus_persica	Prupe.7G191600_v2.0.a1 Prupe.7G191600_v2.0.a1
pyrus_communis	pycom02g08040 pycom15g19810
rosa_chinensis	RchiOBHm_Chr2g0095991
rosa_laevigata	RLG00000016615 RLG00000016631
rosa_multiflora	Rmu_sc0002497.1_g000011 Rmu_sc0018414.1_g000005
rosa_roxburghii	Rroxscaffold_2G00145880
rosa_rugosa	Rorug02G0055700 Rorug02G0055800 Rorug02G0065300
rosa_samantha	Rh2AG103600 Rh2BG105100 Rh2CG107600 Rh2DG105500
rosa_wichuraiana	Rw2G007900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	326, 1082
AciI	CCGC	4 cut(s)	43, 167, 719, 1255
AclWI	GGATC	5 cut(s)	643, 1193, 1301, 1314, 1607
AcoI	YGGCCR	1 cut(s)	1654
AcsI	RAATTY	1 cut(s)	603
AfaI	GTAC	3 cut(s)	594, 1148, 1674
AfiI	CCNNNNNNNGG	9 cut(s)	49, 102, 326, 531, 749, 937, 1001, 1082, 1094
AgsI	TTSAA	3 cut(s)	599, 739, 1274
AjnI	CCWGG	5 cut(s)	463, 806, 907, 959, 1678
AjuI	GAANNNNNNNTTGG	2 cut(s)	440, 472
AloI	GAACNNNNNNTCC	2 cut(s)	1134, 1166
AluBI	AGCT	1 cut(s)	194
AluI	AGCT	1 cut(s)	194
Alw21I	GWGCWC	1 cut(s)	204
Alw26I	GTCTC	4 cut(s)	81, 960, 1092, 1451
Alw44I	GTGCAC	1 cut(s)	200
AlwI	GGATC	5 cut(s)	643, 1193, 1301, 1314, 1607
AlwNI	CAGNNNCTG	1 cut(s)	395
Ama87I	CYCGRG	3 cut(s)	185, 1296, 1345
AoxI	GGCC	5 cut(s)	132, 841, 963, 1084, 1654
ApaLI	GTGCAC	1 cut(s)	200
ApeKI	GCWGC	4 cut(s)	191, 650, 1024, 1511
ApoI	RAATTY	1 cut(s)	603
AspLEI	GCGC	1 cut(s)	166
AspS9I	GGNCC	5 cut(s)	842, 963, 1004, 1085, 1570
AsuC2I	CCSGG	3 cut(s)	171, 1346, 1347
AsuHPI	GGTGA	4 cut(s)	251, 274, 896, 1133
AsuII	TTCGAA	1 cut(s)	385
AvaI	CYCGRG	3 cut(s)	185, 1296, 1345
AvaII	GGWCC	2 cut(s)	1004, 1570
AxyI	CCTNAGG	1 cut(s)	1506
BaeGI	GKGCMC	1 cut(s)	204
BalI	TGGCCA	1 cut(s)	1656
BamHI	GGATCC	1 cut(s)	1306
BarI	GAAGNNNNNNTAC	2 cut(s)	1176, 1208
BauI	CACGAG	1 cut(s)	855
BbsI	GAAGAC	2 cut(s)	372, 1430
Bbv12I	GWGCWC	1 cut(s)	204
BbvI	GCAGC	4 cut(s)	203, 637, 1011, 1523
BccI	CCATC	5 cut(s)	578, 881, 1535, 1631, 1643
BceAI	ACGGC	1 cut(s)	143
BcgI	CGANNNNNNTGC	4 cut(s)	214, 248, 1526, 1560
BciT130I	CCWGG	5 cut(s)	465, 808, 909, 961, 1680
BciVI	GTATCC	2 cut(s)	494, 1046
BclI	TGATCA	1 cut(s)	112
BcnI	CCSGG	3 cut(s)	171, 1346, 1347
BcoDI	GTCTC	4 cut(s)	81, 960, 1092, 1451
BfaI	CTAG	2 cut(s)	351, 1617
BfuI	GTATCC	2 cut(s)	494, 1046
BisI	GCNGC	6 cut(s)	43, 167, 192, 651, 1025, 1512
BlsI	GCNGC	6 cut(s)	44, 168, 193, 652, 1026, 1513
Bme1390I	CCNGG	8 cut(s)	171, 465, 808, 909, 961, 1346, 1347, 1680
Bme18I	GGWCC	2 cut(s)	1004, 1570
BmeT110I	CYCGRG	3 cut(s)	185, 1296, 1345
BmgT120I	GGNCC	5 cut(s)	842, 963, 1004, 1085, 1570
BmiI	GGNNCC	2 cut(s)	1087, 1308
BmrFI	CCNGG	8 cut(s)	171, 465, 808, 909, 961, 1346, 1347, 1680
BmsI	GCATC	6 cut(s)	331, 365, 667, 1048, 1282, 1524
BpiI	GAAGAC	2 cut(s)	372, 1430
BpmI	CTGGAG	1 cut(s)	1136
Bpu14I	TTCGAA	1 cut(s)	385
BpuEI	CTTGAG	1 cut(s)	1200
BpuMI	CCSGG	3 cut(s)	171, 1346, 1347
BsaJI	CCNNGG	8 cut(s)	96, 170, 806, 959, 960, 1093, 1345, 1428
BsaWI	WCCGGW	1 cut(s)	67
BsaXI	ACNNNNNCTCC	2 cut(s)	1134, 1164
Bsc4I	CCNNNNNNNGG	9 cut(s)	49, 102, 326, 531, 749, 937, 1001, 1082, 1094
Bse118I	RCCGGY	1 cut(s)	994
Bse1I	ACTGG	2 cut(s)	1106, 1519
Bse21I	CCTNAGG	1 cut(s)	1506
BseBI	CCWGG	5 cut(s)	465, 808, 909, 961, 1680
BseDI	CCNNGG	8 cut(s)	96, 170, 806, 959, 960, 1093, 1345, 1428
BseGI	GGATG	5 cut(s)	874, 1264, 1399, 1642, 1648
BseLI	CCNNNNNNNGG	9 cut(s)	49, 102, 326, 531, 749, 937, 1001, 1082, 1094
BseMII	CTCAG	1 cut(s)	1335
BseNI	ACTGG	2 cut(s)	1106, 1519
BseRI	GAGGAG	2 cut(s)	65, 118
BseSI	GKGCMC	1 cut(s)	204
BseXI	GCAGC	4 cut(s)	203, 637, 1011, 1523
BshFI	GGCC	5 cut(s)	134, 843, 965, 1086, 1656
BsiHKAI	GWGCWC	1 cut(s)	204
BsiHKCI	CYCGRG	3 cut(s)	185, 1296, 1345
BsiSI	CCGG	5 cut(s)	68, 170, 557, 995, 1346
BslFI	GGGAC	1 cut(s)	1463
BslI	CCNNNNNNNGG	9 cut(s)	49, 102, 326, 531, 749, 937, 1001, 1082, 1094
BsmAI	GTCTC	4 cut(s)	81, 960, 1092, 1451
BsmFI	GGGAC	1 cut(s)	1463
BsmI	GAATGC	1 cut(s)	1514
BsnI	GGCC	5 cut(s)	134, 843, 965, 1086, 1656
BsoBI	CYCGRG	3 cut(s)	185, 1296, 1345
Bsp119I	TTCGAA	1 cut(s)	385
Bsp1286I	GDGCHC	1 cut(s)	204
Bsp1407I	TGTACA	1 cut(s)	1672
Bsp143I	GATC	9 cut(s)	112, 181, 241, 635, 1198, 1306, 1578, 1588, 1599
BspACI	CCGC	4 cut(s)	43, 167, 719, 1255
BspANI	GGCC	5 cut(s)	134, 843, 965, 1086, 1656
BspCNI	CTCAG	1 cut(s)	1334
BspHI	TCATGA	1 cut(s)	508
BspLI	GGNNCC	2 cut(s)	1087, 1308
BspPI	GGATC	5 cut(s)	643, 1193, 1301, 1314, 1607
BspQI	GCTCTTC	1 cut(s)	215
BspT104I	TTCGAA	1 cut(s)	385
BsrFI	RCCGGY	1 cut(s)	994
BsrGI	TGTACA	1 cut(s)	1672
BsrI	ACTGG	2 cut(s)	1106, 1519
BssAI	RCCGGY	1 cut(s)	994
BssECI	CCNNGG	8 cut(s)	96, 170, 806, 959, 960, 1093, 1345, 1428
BssMI	GATC	9 cut(s)	112, 181, 241, 635, 1198, 1306, 1578, 1588, 1599
BssSI	CACGAG	1 cut(s)	855
BssT1I	CCWWGG	3 cut(s)	96, 1093, 1428
Bst2BI	CACGAG	1 cut(s)	855
Bst2UI	CCWGG	5 cut(s)	465, 808, 909, 961, 1680
Bst4CI	ACNGT	4 cut(s)	436, 548, 574, 1146
Bst6I	CTCTTC	5 cut(s)	215, 717, 807, 945, 1215
BstAUI	TGTACA	1 cut(s)	1672
BstBI	TTCGAA	1 cut(s)	385
BstDEI	CTNAG	4 cut(s)	360, 1321, 1506, 1691
BstENI	CCTNNNNNAGG	1 cut(s)	529
BstF5I	GGATG	5 cut(s)	874, 1264, 1399, 1642, 1648
BstHHI	GCGC	1 cut(s)	166
BstKTI	GATC	9 cut(s)	115, 184, 244, 638, 1201, 1309, 1581, 1591, 1602
BstMAI	GTCTC	4 cut(s)	81, 960, 1092, 1451
BstMBI	GATC	9 cut(s)	112, 181, 241, 635, 1198, 1306, 1578, 1588, 1599
BstNI	CCWGG	5 cut(s)	465, 808, 909, 961, 1680
BstSCI	CCNGG	8 cut(s)	169, 463, 806, 907, 959, 1344, 1345, 1678
BstSLI	GKGCMC	1 cut(s)	204
BstV1I	GCAGC	4 cut(s)	203, 637, 1011, 1523
BstV2I	GAAGAC	2 cut(s)	372, 1430
BstX2I	RGATCY	3 cut(s)	635, 1198, 1306
BstXI	CCANNNNNNTGG	2 cut(s)	142, 1019
BstYI	RGATCY	3 cut(s)	635, 1198, 1306
Bsu36I	CCTNAGG	1 cut(s)	1506
BsuI	GTATCC	2 cut(s)	494, 1046
BsuRI	GGCC	5 cut(s)	134, 843, 965, 1086, 1656
BtgZI	GCGATG	1 cut(s)	1398
BtsCI	GGATG	5 cut(s)	874, 1264, 1399, 1642, 1648
CaiI	CAGNNNCTG	1 cut(s)	395
CciI	TCATGA	1 cut(s)	508
CfoI	GCGC	1 cut(s)	166
Cfr10I	RCCGGY	1 cut(s)	994
Cfr13I	GGNCC	5 cut(s)	842, 963, 1004, 1085, 1570
Cfr9I	CCCGGG	1 cut(s)	1345
Csp6I	GTAC	3 cut(s)	593, 1147, 1673
CviAII	CATG	5 cut(s)	155, 490, 509, 946, 1414
CviQI	GTAC	3 cut(s)	593, 1147, 1673
DdeI	CTNAG	4 cut(s)	360, 1321, 1506, 1691
DpnI	GATC	9 cut(s)	114, 183, 243, 637, 1200, 1308, 1580, 1590, 1601
DpnII	GATC	9 cut(s)	112, 181, 241, 635, 1198, 1306, 1578, 1588, 1599
EaeI	YGGCCR	1 cut(s)	1654
Eam1104I	CTCTTC	5 cut(s)	215, 717, 807, 945, 1215
EarI	CTCTTC	5 cut(s)	215, 717, 807, 945, 1215
Eco130I	CCWWGG	3 cut(s)	96, 1093, 1428
Eco47I	GGWCC	2 cut(s)	1004, 1570
Eco81I	CCTNAGG	1 cut(s)	1506
Eco88I	CYCGRG	3 cut(s)	185, 1296, 1345
EcoNI	CCTNNNNNAGG	1 cut(s)	529
EcoRII	CCWGG	5 cut(s)	463, 806, 907, 959, 1678
EcoT14I	CCWWGG	3 cut(s)	96, 1093, 1428
ErhI	CCWWGG	3 cut(s)	96, 1093, 1428
FaeI	CATG	5 cut(s)	158, 493, 512, 949, 1417
FaqI	GGGAC	1 cut(s)	1463
FatI	CATG	5 cut(s)	154, 489, 508, 945, 1413
FauI	CCCGC	1 cut(s)	1248
FbaI	TGATCA	1 cut(s)	112
Fnu4HI	GCNGC	6 cut(s)	43, 167, 192, 651, 1025, 1512
FokI	GGATG	5 cut(s)	881, 1271, 1406, 1649, 1655
Fsp4HI	GCNGC	6 cut(s)	43, 167, 192, 651, 1025, 1512
FspBI	CTAG	2 cut(s)	351, 1617
GlaI	GCGC	1 cut(s)	165
GluI	GCNGC	6 cut(s)	43, 167, 192, 651, 1025, 1512
GsuI	CTGGAG	1 cut(s)	1136
HaeIII	GGCC	5 cut(s)	134, 843, 965, 1086, 1656
HapII	CCGG	5 cut(s)	68, 170, 557, 995, 1346
HhaI	GCGC	1 cut(s)	166
Hin1II	CATG	5 cut(s)	158, 493, 512, 949, 1417
Hin6I	GCGC	1 cut(s)	164
HinP1I	GCGC	1 cut(s)	164
HincII	GTYRAC	2 cut(s)	895, 1378
HindII	GTYRAC	2 cut(s)	895, 1378
HinfI	GANTC	2 cut(s)	953, 1213
HpaII	CCGG	5 cut(s)	68, 170, 557, 995, 1346
HphI	GGTGA	4 cut(s)	251, 274, 896, 1133
Hpy166II	GTNNAC	5 cut(s)	202, 551, 895, 1378, 1421
Hpy188I	TCNGA	7 cut(s)	117, 236, 940, 1324, 1336, 1593, 1630
Hpy188III	TCNNGA	9 cut(s)	217, 245, 351, 509, 1139, 1217, 1298, 1355, 1367
Hpy8I	GTNNAC	5 cut(s)	202, 551, 895, 1378, 1421
HpyAV	CCTTC	6 cut(s)	640, 661, 1178, 1219, 1486, 1627
HpyCH4III	ACNGT	4 cut(s)	436, 548, 574, 1146
HpyCH4V	TGCA	9 cut(s)	202, 398, 529, 611, 680, 829, 854, 1180, 1537
HpyF3I	CTNAG	4 cut(s)	360, 1321, 1506, 1691
Hsp92II	CATG	5 cut(s)	158, 493, 512, 949, 1417
HspAI	GCGC	1 cut(s)	164
Ksp22I	TGATCA	1 cut(s)	112
Kzo9I	GATC	9 cut(s)	112, 181, 241, 635, 1198, 1306, 1578, 1588, 1599
LguI	GCTCTTC	1 cut(s)	215
Lsp1109I	GCAGC	4 cut(s)	203, 637, 1011, 1523
LweI	GCATC	6 cut(s)	331, 365, 667, 1048, 1282, 1524
MaeI	CTAG	2 cut(s)	351, 1617
MaeIII	GTNAC	3 cut(s)	685, 1169, 1340
MalI	GATC	9 cut(s)	114, 183, 243, 637, 1200, 1308, 1580, 1590, 1601
MboI	GATC	9 cut(s)	112, 181, 241, 635, 1198, 1306, 1578, 1588, 1599
MfeI	CAATTG	1 cut(s)	1277
MflI	RGATCY	3 cut(s)	635, 1198, 1306
MhlI	GDGCHC	1 cut(s)	204
MlsI	TGGCCA	1 cut(s)	1656
MluCI	AATT	2 cut(s)	603, 1277
MluNI	TGGCCA	1 cut(s)	1656
MlyI	GAGTC	2 cut(s)	962, 1207
MmeI	TCCRAC	3 cut(s)	307, 613, 1036
Mox20I	TGGCCA	1 cut(s)	1656
MscI	TGGCCA	1 cut(s)	1656
MseI	TTAA	3 cut(s)	423, 486, 1251
MslI	CAYNNNNRTG	1 cut(s)	1662
Msp20I	TGGCCA	1 cut(s)	1656
MspA1I	CMGCKG	1 cut(s)	194
MspI	CCGG	5 cut(s)	68, 170, 557, 995, 1346
MspR9I	CCNGG	8 cut(s)	171, 465, 808, 909, 961, 1346, 1347, 1680
MunI	CAATTG	1 cut(s)	1277
Mva1269I	GAATGC	1 cut(s)	1514
MvaI	CCWGG	5 cut(s)	465, 808, 909, 961, 1680
NciI	CCSGG	3 cut(s)	171, 1346, 1347
NdeII	GATC	9 cut(s)	112, 181, 241, 635, 1198, 1306, 1578, 1588, 1599
NlaIII	CATG	5 cut(s)	158, 493, 512, 949, 1417
NlaIV	GGNNCC	2 cut(s)	1087, 1308
NspV	TTCGAA	1 cut(s)	385
PaeR7I	CTCGAG	1 cut(s)	1296
PagI	TCATGA	1 cut(s)	508
PasI	CCCWGGG	1 cut(s)	960
PciSI	GCTCTTC	1 cut(s)	215
PcsI	WCGNNNNNNNCGW	1 cut(s)	1552
PctI	GAATGC	1 cut(s)	1514
PflMI	CCANNNNNTGG	2 cut(s)	326, 1082
PkrI	GCNGC	6 cut(s)	44, 168, 193, 652, 1026, 1513
PleI	GAGTC	2 cut(s)	961, 1207
PpsI	GAGTC	2 cut(s)	961, 1207
Psp6I	CCWGG	5 cut(s)	463, 806, 907, 959, 1678
PspGI	CCWGG	5 cut(s)	463, 806, 907, 959, 1678
PspN4I	GGNNCC	2 cut(s)	1087, 1308
PspPI	GGNCC	5 cut(s)	842, 963, 1004, 1085, 1570
PstNI	CAGNNNCTG	1 cut(s)	395
PsuI	RGATCY	3 cut(s)	635, 1198, 1306
PvuII	CAGCTG	1 cut(s)	194
RsaI	GTAC	3 cut(s)	594, 1148, 1674
RsaNI	GTAC	3 cut(s)	593, 1147, 1673
RseI	CAYNNNNRTG	1 cut(s)	1662
SapI	GCTCTTC	1 cut(s)	215
SaqAI	TTAA	3 cut(s)	423, 486, 1251
SatI	GCNGC	6 cut(s)	43, 167, 192, 651, 1025, 1512
Sau3AI	GATC	9 cut(s)	112, 181, 241, 635, 1198, 1306, 1578, 1588, 1599
Sau96I	GGNCC	5 cut(s)	842, 963, 1004, 1085, 1570
SchI	GAGTC	2 cut(s)	962, 1207
ScrFI	CCNGG	8 cut(s)	171, 465, 808, 909, 961, 1346, 1347, 1680
SduI	GDGCHC	1 cut(s)	204
SetI	ASST	9 cut(s)	196, 241, 527, 796, 802, 886, 1152, 1189, 1374
SfaNI	GCATC	6 cut(s)	331, 365, 667, 1048, 1282, 1524
Sfr274I	CTCGAG	1 cut(s)	1296
SfuI	TTCGAA	1 cut(s)	385
SinI	GGWCC	2 cut(s)	1004, 1570
SlaI	CTCGAG	1 cut(s)	1296
SmaI	CCCGGG	1 cut(s)	1347
SmiMI	CAYNNNNRTG	1 cut(s)	1662
SmlI	CTYRAG	2 cut(s)	1215, 1296
SmoI	CTYRAG	2 cut(s)	1215, 1296
Sse9I	AATT	2 cut(s)	603, 1277
SsiI	CCGC	4 cut(s)	43, 167, 719, 1255
SspMI	CTAG	2 cut(s)	351, 1617
StyD4I	CCNGG	8 cut(s)	169, 463, 806, 907, 959, 1344, 1345, 1678
StyI	CCWWGG	3 cut(s)	96, 1093, 1428
TaaI	ACNGT	4 cut(s)	436, 548, 574, 1146
TaqI	TCGA	4 cut(s)	216, 385, 1297, 1546
TasI	AATT	2 cut(s)	603, 1277
TatI	WGTACW	2 cut(s)	592, 1672
TauI	GCSGC	2 cut(s)	45, 169
Tru1I	TTAA	3 cut(s)	423, 486, 1251
Tru9I	TTAA	3 cut(s)	423, 486, 1251
TseI	GCWGC	4 cut(s)	191, 650, 1024, 1511
TspDTI	ATGAA	8 cut(s)	17, 143, 780, 1005, 1047, 1430, 1500, 1680
TspMI	CCCGGG	1 cut(s)	1345
Van91I	CCANNNNNTGG	2 cut(s)	326, 1082
VneI	GTGCAC	1 cut(s)	200
VpaK11BI	GGWCC	2 cut(s)	1004, 1570
XagI	CCTNNNNNAGG	1 cut(s)	529
XapI	RAATTY	1 cut(s)	603
XbaI	TCTAGA	1 cut(s)	350
XhoI	CTCGAG	1 cut(s)	1296
XmaI	CCCGGG	1 cut(s)	1345
XspI	CTAG	2 cut(s)	351, 1617

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.