MD15G1224800.v1.1

Pectinesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0014883
Physical Location & Seq
Reverse (-)
18278973 .. 18281612
2640 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1224800.v1.1.491

Sequence Viewer

Length: 1614 bp
ATGGCTTCCTCCACTCCAAAATTGCTGCAGCTCCTCTGCATAATCTTATTTCTCCACATTTCTTCTTCTTCGTCATCGTCAAACACAACTACTTTTAATCCCCATTTGGCGTCCCTAAGATCATTCTGCAAGTCCGCACCCTACCCAGACATCTGCTTCGACTCGTTGAAGCTCTCAATCTCAATAAACATCACCCCCAACATCATCTCCTACCTCCTCCATTCCCTCCAAGTCGCGATCTCCGAAGCCGGAAAGCTCACCGATCTCTTCTACAAGGCTGGACAGTACCCAAACATCGTCGAGAAGCAAAAGGGAGCTGTCCAGGACTGCAAGGAGCTCCACCAAATCACTCTCTCTTCCTTACAAAGATCTGTGTCTCAAGTCCAAGCGGGAAACGCCAAGAAACTCAACGATGCTAGGGCTTACCTCAGCGCCGCTCTCACAAACAAGAACACTTGCATGGAAGGGTTGGATTCTGCTTCTGGCCCTATGAAGCCAACCCTAGTTAACTCCTTGACTAGCACATACAAATATGTAAGCAATTCTCTCTCAGCTATCTCAAAACAAGGGACCAATAAAGGGCGCACAAATCGCCGTCTCATGAGCATTCCGAGGTGGTTGTCGAGGAGAGACCGGCGGATATTGGAGAGTTCCGGTGACGAATATGACCCCAGGGAAGTCCTAACGGTTGCCGCGGATGGATCAGGGAACTTCACCACAATTAGTGATGCTATTATTTTTGCTCCAAATAATAGTTATGATAGGACGATTATATATGTTAAAGAAGGGGTTTATGAAGAAAATGTGGAGATTCCGAGCTACAAGACCAACATTGTTCTTCTTGGAGATGGAAGTGACATCACTTTCATCACTGGTAACCGGAGTGTTGTTGATGGATGGACTACATTCAGATCTGCAACCGTCGCTGTGTCCGCAGAGGGCTTTCTAGCAAGAGACATAACAATTCGGAACACGGCAGGGCCAATAAAGCACCAAGCAGTTGCTCTGAGAATTAATGCAGACTTGGCTGCAATTTACAAATGCACCATCGATGGCTACCAAGACACATTATACGTACACTCTTTTAGACAATTCTATAGAGAGTGCGACATATTCGGAACCATAGACTACATATTTGGTAACGCCGCAGTTGTATTTCAAGCATGCAACATCGTGTCGAAAATGCCAATGCCGGGACAATTCACAGTCGTCACAGCACAGTCCAGGGAGACACCAGATCAGAACACAGGAATCTCCGTGCAGAACTGCTCCATTATTGCCACTGATGAGTTGTACTCCAATTCCAGCATTGTCAAAAGCTACTTAGGCCGGCCGTGGAAGAATTACTCTACGACTGTTGTCCTGGAGTCCTACATTGACGACTTTATTGACCCGACTGGGTGGAAAAATTGGTCCGGGGACCTAGGGTTGAACACTTTGTACTATGGAGAGTATGGGAATTATGGTCCTGGCGCTGGGACGGAAAATAGAGTGAACTGGAAAGGACATCATGTTATGGACTATTATGATGCATCCAATTTCACTGTGCAAGAGTTTATTGCTGGTGATGAATGGCTGCAGTACACTTCATTTCCTTATGATGATGGCATCTGA

Protein Analysis

538

Amino Acids

59.46

Weight (kDa)

5.96

Isoelectric Point (pI)

39.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMEI PF04043 38 - 184 4.9e-24 Plant invertase/pectin methylesterase inhibitor
Pectinesterase PF01095 229 - 523 4.6e-138 Pectinesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014883)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G26440
fragaria_vesca FvH4_1g09580
malus_domestica MD02G1104400.v1.1 MD02G1104500.v1.1 MD15G1224800.v1.1
prunus_persica Prupe.7G190400_v2.0.a1
pyrus_communis pycom02g08230
rosa_chinensis RchiOBHm_Chr2g0096441
rosa_laevigata RLG00000016640
rosa_multiflora Rmu_sc0004096.1_g000025
rosa_roxburghii Rroxscaffold_2G00145650
rosa_samantha Rh2AG104700 Rh2BG106900 Rh2CG108700 Rh2DG107800
rosa_wichuraiana Rw2G008090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 437
AccII CGCG 2 cut(s) 236, 695
AciI CCGC 8 cut(s) 135, 389, 435, 637, 693, 695, 933, 1146
AclWI GGATC 1 cut(s) 709
AcoI YGGCCR 1 cut(s) 1331
AcyI GRCGYC 1 cut(s) 110
AfaI GTAC 5 cut(s) 287, 1077, 1295, 1442, 1583
AfiI CCNNNNNNNGG 3 cut(s) 579, 1193, 1475
AgsI TTSAA 3 cut(s) 169, 1160, 1432
AjnI CCWGG 5 cut(s) 321, 671, 1223, 1362, 1468
AluBI AGCT 8 cut(s) 31, 172, 256, 317, 337, 554, 819, 1320
AluI AGCT 8 cut(s) 31, 172, 256, 317, 337, 554, 819, 1320
Alw21I GWGCWC 1 cut(s) 339
Alw26I GTCTC 5 cut(s) 381, 602, 624, 948, 1223
AlwI GGATC 1 cut(s) 709
AoxI GGCC 4 cut(s) 484, 980, 1327, 1331
ApeKI GCWGC 4 cut(s) 25, 28, 1028, 1576
ArsI GACNNNNNNTTYG 4 cut(s) 140, 172, 1118, 1150
AseI ATTAAT 1 cut(s) 1014
AspA2I CCTAGG 1 cut(s) 1423
AspLEI GCGC 3 cut(s) 434, 585, 1475
AspS9I GGNCC 6 cut(s) 485, 570, 980, 1413, 1420, 1466
AsuC2I CCSGG 2 cut(s) 1194, 1417
AsuHPI GGTGA 5 cut(s) 184, 250, 668, 706, 1577
AvaII GGWCC 4 cut(s) 570, 1413, 1420, 1466
AvrII CCTAGG 1 cut(s) 1423
BanII GRGCYC 1 cut(s) 339
Bbv12I GWGCWC 1 cut(s) 339
BbvCI CCTCAGC 1 cut(s) 428
BbvI GCAGC 4 cut(s) 12, 40, 1015, 1563
BccI CCATC 7 cut(s) 692, 842, 887, 891, 1046, 1055, 1598
BceAI ACGGC 3 cut(s) 579, 990, 1318
BciT130I CCWGG 5 cut(s) 323, 673, 1225, 1364, 1470
BcnI CCSGG 2 cut(s) 1194, 1417
BcoDI GTCTC 5 cut(s) 381, 602, 624, 948, 1223
BfaI CTAG 5 cut(s) 417, 503, 519, 947, 1424
BfmI CTRYAG 3 cut(s) 26, 1096, 1577
BfoI RGCGCY 2 cut(s) 435, 1476
BglII AGATCT 2 cut(s) 368, 911
BisI GCNGC 7 cut(s) 26, 29, 435, 693, 1029, 1146, 1577
BlnI CCTAGG 1 cut(s) 1423
BlsI GCNGC 7 cut(s) 27, 30, 436, 694, 1030, 1147, 1578
Bme1390I CCNGG 7 cut(s) 323, 673, 1194, 1225, 1364, 1417, 1470
Bme18I GGWCC 4 cut(s) 570, 1413, 1420, 1466
BmgT120I GGNCC 6 cut(s) 485, 570, 980, 1413, 1420, 1466
BmiI GGNNCC 3 cut(s) 571, 1120, 1421
BmrFI CCNGG 7 cut(s) 323, 673, 1194, 1225, 1364, 1417, 1470
BmrI ACTGGG 1 cut(s) 1407
BmsI GCATC 4 cut(s) 403, 718, 1519, 1541
BmuI ACTGGG 1 cut(s) 1407
BoxI GACNNNNGTC 1 cut(s) 1358
BplI GAGNNNNNCTC 2 cut(s) 1280, 1312
BpmI CTGGAG 1 cut(s) 1385
Bpu10I CCTNAGC 1 cut(s) 428
BpuEI CTTGAG 1 cut(s) 363
BpuMI CCSGG 2 cut(s) 1194, 1417
Bsa29I ATCGAT 1 cut(s) 1050
BsaAI YACGTR 1 cut(s) 1075
BsaHI GRCGYC 1 cut(s) 110
BsaI GGTCTC 1 cut(s) 624
BsaJI CCNNGG 8 cut(s) 611, 671, 672, 693, 1224, 1334, 1416, 1423
BsaWI WCCGGW 2 cut(s) 653, 879
BsaXI ACNNNNNCTCC 2 cut(s) 191, 221
Bsc4I CCNNNNNNNGG 3 cut(s) 579, 1193, 1475
Bse118I RCCGGY 2 cut(s) 633, 1329
Bse1I ACTGG 3 cut(s) 877, 1402, 1502
BseBI CCWGG 5 cut(s) 323, 673, 1225, 1364, 1470
BseCI ATCGAT 1 cut(s) 1050
BseDI CCNNGG 8 cut(s) 611, 671, 672, 693, 1224, 1334, 1416, 1423
BseGI GGATG 3 cut(s) 703, 902, 1532
BseLI CCNNNNNNNGG 3 cut(s) 579, 1193, 1475
BseMII CTCAG 3 cut(s) 442, 564, 998
BseNI ACTGG 3 cut(s) 877, 1402, 1502
BseRI GAGGAG 3 cut(s) 23, 206, 640
BseX3I CGGCCG 1 cut(s) 1331
BseXI GCAGC 4 cut(s) 12, 40, 1015, 1563
BseYI CCCAGC 1 cut(s) 1475
BsgI GTGCAG 1 cut(s) 1280
Bsh1236I CGCG 2 cut(s) 236, 695
Bsh1285I CGRYCG 1 cut(s) 1334
BshFI GGCC 4 cut(s) 486, 982, 1329, 1333
BshVI ATCGAT 1 cut(s) 1050
BsiEI CGRYCG 1 cut(s) 1334
BsiHKAI GWGCWC 1 cut(s) 339
BsiSI CCGG 7 cut(s) 249, 634, 654, 880, 1193, 1330, 1416
BslFI GGGAC 5 cut(s) 97, 583, 1209, 1433, 1492
BslI CCNNNNNNNGG 3 cut(s) 579, 1193, 1475
BsmAI GTCTC 5 cut(s) 381, 602, 624, 948, 1223
BsmBI CGTCTC 1 cut(s) 602
BsmFI GGGAC 5 cut(s) 97, 583, 1209, 1433, 1492
BsmI GAATGC 1 cut(s) 606
BsnI GGCC 4 cut(s) 486, 982, 1329, 1333
Bso31I GGTCTC 1 cut(s) 624
Bsp1286I GDGCHC 1 cut(s) 339
Bsp143I GATC 7 cut(s) 119, 237, 262, 368, 701, 911, 1237
Bsp68I TCGCGA 1 cut(s) 236
BspACI CCGC 8 cut(s) 135, 389, 435, 637, 693, 695, 933, 1146
BspANI GGCC 4 cut(s) 486, 982, 1329, 1333
BspCNI CTCAG 3 cut(s) 441, 563, 999
BspDI ATCGAT 1 cut(s) 1050
BspFNI CGCG 2 cut(s) 236, 695
BspHI TCATGA 1 cut(s) 600
BspLI GGNNCC 3 cut(s) 571, 1120, 1421
BspMAI CTGCAG 2 cut(s) 30, 1581
BspPI GGATC 1 cut(s) 709
BspTNI GGTCTC 1 cut(s) 624
BsrBI CCGCTC 1 cut(s) 437
BsrFI RCCGGY 2 cut(s) 633, 1329
BsrI ACTGG 3 cut(s) 877, 1402, 1502
BssAI RCCGGY 2 cut(s) 633, 1329
BssECI CCNNGG 8 cut(s) 611, 671, 672, 693, 1224, 1334, 1416, 1423
BssMI GATC 7 cut(s) 119, 237, 262, 368, 701, 911, 1237
BssNI GRCGYC 1 cut(s) 110
BssT1I CCWWGG 1 cut(s) 1423
Bst2UI CCWGG 5 cut(s) 323, 673, 1225, 1364, 1470
Bst4CI ACNGT 7 cut(s) 285, 688, 922, 1207, 1221, 1357, 1546
Bst6I CTCTTC 2 cut(s) 272, 361
BstACI GRCGYC 1 cut(s) 110
BstBAI YACGTR 1 cut(s) 1075
BstC8I GCNNGC 2 cut(s) 1165, 1331
BstDEI CTNAG 5 cut(s) 116, 428, 550, 1007, 1324
BstDSI CCRYGG 2 cut(s) 693, 1334
BstEII GGTNACC 1 cut(s) 875
BstF5I GGATG 3 cut(s) 703, 902, 1532
BstFNI CGCG 2 cut(s) 236, 695
BstH2I RGCGCY 2 cut(s) 435, 1476
BstHHI GCGC 3 cut(s) 434, 585, 1475
BstKTI GATC 7 cut(s) 122, 240, 265, 371, 704, 914, 1240
BstMAI GTCTC 5 cut(s) 381, 602, 624, 948, 1223
BstMBI GATC 7 cut(s) 119, 237, 262, 368, 701, 911, 1237
BstMCI CGRYCG 1 cut(s) 1334
BstMWI GCNNNNNNNGC 7 cut(s) 395, 591, 923, 932, 988, 1025, 1326
BstNI CCWGG 5 cut(s) 323, 673, 1225, 1364, 1470
BstNSI RCATGY 1 cut(s) 1167
BstPAI GACNNNNGTC 1 cut(s) 1358
BstPI GGTNACC 1 cut(s) 875
BstSCI CCNGG 7 cut(s) 321, 671, 1192, 1223, 1362, 1415, 1468
BstSFI CTRYAG 3 cut(s) 26, 1096, 1577
BstSNI TACGTA 1 cut(s) 1075
BstUI CGCG 2 cut(s) 236, 695
BstV1I GCAGC 4 cut(s) 12, 40, 1015, 1563
BstX2I RGATCY 2 cut(s) 368, 911
BstYI RGATCY 2 cut(s) 368, 911
BstZI CGGCCG 1 cut(s) 1331
Bsu15I ATCGAT 1 cut(s) 1050
BsuRI GGCC 4 cut(s) 486, 982, 1329, 1333
BsuTUI ATCGAT 1 cut(s) 1050
BtgI CCRYGG 2 cut(s) 693, 1334
BtsCI GGATG 3 cut(s) 703, 902, 1532
BtsIMutI CAGTG 3 cut(s) 870, 1281, 1542
BtuMI TCGCGA 1 cut(s) 236
Cac8I GCNNGC 2 cut(s) 1165, 1331
CciI TCATGA 1 cut(s) 600
CfoI GCGC 3 cut(s) 434, 585, 1475
Cfr10I RCCGGY 2 cut(s) 633, 1329
Cfr13I GGNCC 6 cut(s) 485, 570, 980, 1413, 1420, 1466
Cfr42I CCGCGG 1 cut(s) 696
ClaI ATCGAT 1 cut(s) 1050
CseI GACGC 1 cut(s) 99
Csp6I GTAC 5 cut(s) 286, 1076, 1294, 1441, 1582
CviAII CATG 4 cut(s) 460, 601, 1164, 1511
CviQI GTAC 5 cut(s) 286, 1076, 1294, 1441, 1582
DdeI CTNAG 5 cut(s) 116, 428, 550, 1007, 1324
DpnI GATC 7 cut(s) 121, 239, 264, 370, 703, 913, 1239
DpnII GATC 7 cut(s) 119, 237, 262, 368, 701, 911, 1237
EaeI YGGCCR 1 cut(s) 1331
EagI CGGCCG 1 cut(s) 1331
Eam1104I CTCTTC 2 cut(s) 272, 361
EarI CTCTTC 2 cut(s) 272, 361
EciI GGCGGA 1 cut(s) 652
Ecl136II GAGCTC 1 cut(s) 337
EclXI CGGCCG 1 cut(s) 1331
Eco105I TACGTA 1 cut(s) 1075
Eco130I CCWWGG 1 cut(s) 1423
Eco24I GRGCYC 1 cut(s) 339
Eco31I GGTCTC 1 cut(s) 624
Eco47I GGWCC 4 cut(s) 570, 1413, 1420, 1466
Eco52I CGGCCG 1 cut(s) 1331
Eco53kI GAGCTC 1 cut(s) 337
Eco91I GGTNACC 1 cut(s) 875
EcoICRI GAGCTC 1 cut(s) 337
EcoO109I RGGNCCY 1 cut(s) 1420
EcoO65I GGTNACC 1 cut(s) 875
EcoRII CCWGG 5 cut(s) 321, 671, 1223, 1362, 1468
EcoT14I CCWWGG 1 cut(s) 1423
EcoT22I ATGCAT 1 cut(s) 1534
EcoT38I GRGCYC 1 cut(s) 339
ErhI CCWWGG 1 cut(s) 1423
Esp3I CGTCTC 1 cut(s) 602
FaeI CATG 4 cut(s) 463, 604, 1167, 1514
FaqI GGGAC 5 cut(s) 97, 583, 1209, 1433, 1492
FatI CATG 4 cut(s) 459, 600, 1163, 1510
FauI CCCGC 1 cut(s) 382
Fnu4HI GCNGC 7 cut(s) 26, 29, 435, 693, 1029, 1146, 1577
FokI GGATG 3 cut(s) 710, 909, 1519
FriOI GRGCYC 1 cut(s) 339
FseI GGCCGGCC 1 cut(s) 1333
Fsp4HI GCNGC 7 cut(s) 26, 29, 435, 693, 1029, 1146, 1577
FspBI CTAG 5 cut(s) 417, 503, 519, 947, 1424
GlaI GCGC 3 cut(s) 433, 584, 1474
GluI GCNGC 7 cut(s) 26, 29, 435, 693, 1029, 1146, 1577
GsaI CCCAGC 1 cut(s) 1479
GsuI CTGGAG 1 cut(s) 1385
HaeII RGCGCY 2 cut(s) 435, 1476
HaeIII GGCC 4 cut(s) 486, 982, 1329, 1333
HapII CCGG 7 cut(s) 249, 634, 654, 880, 1193, 1330, 1416
HgaI GACGC 1 cut(s) 99
HhaI GCGC 3 cut(s) 434, 585, 1475
Hin1I GRCGYC 1 cut(s) 110
Hin1II CATG 4 cut(s) 463, 604, 1167, 1514
Hin6I GCGC 3 cut(s) 432, 583, 1473
HinP1I GCGC 3 cut(s) 432, 583, 1473
HincII GTYRAC 1 cut(s) 508
HindII GTYRAC 1 cut(s) 508
HinfI GANTC 5 cut(s) 161, 473, 811, 1251, 1367
HpaI GTTAAC 1 cut(s) 508
HpaII CCGG 7 cut(s) 249, 634, 654, 880, 1193, 1330, 1416
HphI GGTGA 5 cut(s) 184, 250, 668, 706, 1577
Hpy166II GTNNAC 4 cut(s) 508, 1078, 1495, 1584
Hpy188I TCNGA 9 cut(s) 244, 612, 816, 911, 969, 1008, 1118, 1242, 1613
Hpy188III TCNNGA 3 cut(s) 235, 301, 601
Hpy8I GTNNAC 4 cut(s) 508, 1078, 1495, 1584
Hpy99I CGWCG 2 cut(s) 302, 926
HpyAV CCTTC 2 cut(s) 458, 779
HpyCH4III ACNGT 7 cut(s) 285, 688, 922, 1207, 1221, 1357, 1546
HpyCH4IV ACGT 1 cut(s) 1074
HpyF10VI GCNNNNNNNGC 7 cut(s) 395, 591, 923, 932, 988, 1025, 1326
HpyF3I CTNAG 5 cut(s) 116, 428, 550, 1007, 1324
HpySE526I ACGT 1 cut(s) 1074
Hsp92I GRCGYC 1 cut(s) 110
Hsp92II CATG 4 cut(s) 463, 604, 1167, 1514
HspAI GCGC 3 cut(s) 432, 583, 1473
KroI GCCGGC 1 cut(s) 1329
KroNI GCCGGC 1 cut(s) 1331
KspAI GTTAAC 1 cut(s) 508
KspI CCGCGG 1 cut(s) 696
Kzo9I GATC 7 cut(s) 119, 237, 262, 368, 701, 911, 1237
LmnI GCTCC 6 cut(s) 36, 314, 334, 342, 748, 1274
Lsp1109I GCAGC 4 cut(s) 12, 40, 1015, 1563
LweI GCATC 4 cut(s) 403, 718, 1519, 1541
MaeI CTAG 5 cut(s) 417, 503, 519, 947, 1424
MaeII ACGT 1 cut(s) 1074
MaeIII GTNAC 5 cut(s) 656, 854, 875, 1139, 1210
MalI GATC 7 cut(s) 121, 239, 264, 370, 703, 913, 1239
MbiI CCGCTC 1 cut(s) 437
MboI GATC 7 cut(s) 119, 237, 262, 368, 701, 911, 1237
MboII GAAGA 8 cut(s) 54, 57, 60, 259, 348, 809, 830, 1351
MflI RGATCY 2 cut(s) 368, 911
MhlI GDGCHC 1 cut(s) 339
MlyI GAGTC 2 cut(s) 155, 1376
MmeI TCCRAC 1 cut(s) 450
MnlI CCTC 9 cut(s) 19, 44, 224, 227, 236, 437, 606, 618, 931
Mph1103I ATGCAT 1 cut(s) 1534
MroNI GCCGGC 1 cut(s) 1329
MseI TTAA 4 cut(s) 96, 507, 780, 1014
MslI CAYNNNNRTG 1 cut(s) 458
MspA1I CMGCKG 1 cut(s) 695
MspI CCGG 7 cut(s) 249, 634, 654, 880, 1193, 1330, 1416
MspR9I CCNGG 7 cut(s) 323, 673, 1194, 1225, 1364, 1417, 1470
Mva1269I GAATGC 1 cut(s) 606
MvaI CCWGG 5 cut(s) 323, 673, 1225, 1364, 1470
MvnI CGCG 2 cut(s) 236, 695
MwoI GCNNNNNNNGC 7 cut(s) 395, 591, 923, 932, 988, 1025, 1326
NaeI GCCGGC 1 cut(s) 1331
NciI CCSGG 2 cut(s) 1194, 1417
NdeII GATC 7 cut(s) 119, 237, 262, 368, 701, 911, 1237
NgoMIV GCCGGC 1 cut(s) 1329
NlaIII CATG 4 cut(s) 463, 604, 1167, 1514
NlaIV GGNNCC 3 cut(s) 571, 1120, 1421
NmuCI GTSAC 3 cut(s) 656, 854, 1210
NruI TCGCGA 1 cut(s) 236
NsiI ATGCAT 1 cut(s) 1534
NspI RCATGY 1 cut(s) 1167
PaeI GCATGC 1 cut(s) 1167
PagI TCATGA 1 cut(s) 600
PasI CCCWGGG 1 cut(s) 672
PcsI WCGNNNNNNNCGW 1 cut(s) 240
PctI GAATGC 1 cut(s) 606
PdiI GCCGGC 1 cut(s) 1331
PfeI GAWTC 3 cut(s) 473, 811, 1251
PfoI TCCNGGA 2 cut(s) 321, 1362
PkrI GCNGC 7 cut(s) 27, 30, 436, 694, 1030, 1147, 1578
PleI GAGTC 2 cut(s) 155, 1375
PpsI GAGTC 2 cut(s) 155, 1375
Ppu21I YACGTR 1 cut(s) 1075
PpuMI RGGWCCY 1 cut(s) 1420
PshAI GACNNNNGTC 1 cut(s) 1358
PshBI ATTAAT 1 cut(s) 1014
Psp124BI GAGCTC 1 cut(s) 339
Psp5II RGGWCCY 1 cut(s) 1420
Psp6I CCWGG 5 cut(s) 321, 671, 1223, 1362, 1468
PspEI GGTNACC 1 cut(s) 875
PspFI CCCAGC 1 cut(s) 1475
PspGI CCWGG 5 cut(s) 321, 671, 1223, 1362, 1468
PspN4I GGNNCC 3 cut(s) 571, 1120, 1421
PspPI GGNCC 6 cut(s) 485, 570, 980, 1413, 1420, 1466
PspPPI RGGWCCY 1 cut(s) 1420
PsrI GAACNNNNNNTAC 2 cut(s) 1424, 1456
PstI CTGCAG 2 cut(s) 30, 1581
PsuI RGATCY 2 cut(s) 368, 911
RigI GGCCGGCC 1 cut(s) 1333
RruI TCGCGA 1 cut(s) 236
RsaI GTAC 5 cut(s) 287, 1077, 1295, 1442, 1583
RsaNI GTAC 5 cut(s) 286, 1076, 1294, 1441, 1582
RseI CAYNNNNRTG 1 cut(s) 458
SacI GAGCTC 1 cut(s) 339
SacII CCGCGG 1 cut(s) 696
SaqAI TTAA 4 cut(s) 96, 507, 780, 1014
SatI GCNGC 7 cut(s) 26, 29, 435, 693, 1029, 1146, 1577
Sau3AI GATC 7 cut(s) 119, 237, 262, 368, 701, 911, 1237
Sau96I GGNCC 6 cut(s) 485, 570, 980, 1413, 1420, 1466
SchI GAGTC 2 cut(s) 155, 1376
ScrFI CCNGG 7 cut(s) 323, 673, 1194, 1225, 1364, 1417, 1470
SduI GDGCHC 1 cut(s) 339
SfaNI GCATC 4 cut(s) 403, 718, 1519, 1541
SfcI CTRYAG 3 cut(s) 26, 1096, 1577
Sfr303I CCGCGG 1 cut(s) 696
SgrBI CCGCGG 1 cut(s) 696
SinI GGWCC 4 cut(s) 570, 1413, 1420, 1466
SmiMI CAYNNNNRTG 1 cut(s) 458
SmlI CTYRAG 1 cut(s) 378
SmoI CTYRAG 1 cut(s) 378
SnaBI TACGTA 1 cut(s) 1075
SphI GCATGC 1 cut(s) 1167
SsiI CCGC 8 cut(s) 135, 389, 435, 637, 693, 695, 933, 1146
SspMI CTAG 5 cut(s) 417, 503, 519, 947, 1424
SstI GAGCTC 1 cut(s) 339
StyD4I CCNGG 7 cut(s) 321, 671, 1192, 1223, 1362, 1415, 1468
StyI CCWWGG 1 cut(s) 1423
TaaI ACNGT 7 cut(s) 285, 688, 922, 1207, 1221, 1357, 1546
TaiI ACGT 1 cut(s) 1077
TaqI TCGA 5 cut(s) 159, 300, 623, 1050, 1178
TatI WGTACW 3 cut(s) 1293, 1440, 1581
TauI GCSGC 3 cut(s) 437, 695, 1148
TfiI GAWTC 3 cut(s) 473, 811, 1251
Tru1I TTAA 4 cut(s) 96, 507, 780, 1014
Tru9I TTAA 4 cut(s) 96, 507, 780, 1014
TscAI CASTG 3 cut(s) 877, 1288, 1549
TseFI GTSAC 3 cut(s) 656, 854, 1210
TseI GCWGC 4 cut(s) 25, 28, 1028, 1576
Tsp45I GTSAC 3 cut(s) 656, 854, 1210
TspDTI ATGAA 5 cut(s) 506, 810, 856, 1578, 1584
TspGWI ACGGA 2 cut(s) 1246, 1496
TspRI CASTG 3 cut(s) 877, 1288, 1549
VpaK11BI GGWCC 4 cut(s) 570, 1413, 1420, 1466
VspI ATTAAT 1 cut(s) 1014
XceI RCATGY 1 cut(s) 1167
XmaJI CCTAGG 1 cut(s) 1423
XspI CTAG 5 cut(s) 417, 503, 519, 947, 1424
Zsp2I ATGCAT 1 cut(s) 1534
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.