Rroxscaffold_2G00145650

Pectinesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0014883
Physical Location & Seq
Forward (+)
83532379 .. 83537002
4624 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00145650.1

Sequence Viewer

Length: 1650 bp
ATGGCTTCCTCCATCCCAAAAGTGCTTTTGCAGTTTTTGCTTCTTTGTATAATCTTCTTCTCAACAACTAAGGCTCTCCGCAATTCTTCTTCTTCTTCATCATCAACAACTAATACTCTCAATCCCCATTTGTCTTCCATTAAATCCTTCTGCAAGTCCACTCCCTACCCCGATGTCTGTTTCGACTCACTGAAGCTCTCAATCTCCATCAACATCTCCCCCAACATCCTCACTTACCTCCTCCAATCCCTCCAAATCGCGCTATCCGAAGCCACAAAGCTCACCGATCTTTTCTACAAGGCAGGACTTTACTCCAACATTGTTGAGAAACAAAAGGGAGCAATCCAGGACTGCAAAGACCTCCACCAGATCACACTCTCTTCCATAAAACGATCAGTTTCTGGAGTCAAGTCTTCGAACAACAAGAAACTAAGGGATGCAAGAGCCTATCTCAGTGCTGCCCTCACAAACAAGAACACATGCTTGGAAGGCTTGGAGTCTGCTTCTGGTCCTATGAAGCCAACCCTGGTCAGCTCCTTAACTAGTACATACAAGTATGTTAGCAACTCTCTTTCTGCTCTAAAGAATCAAGTGCCTAATCCAAACGGCCATAAAAACCGGCGTCTGTTGGGAGTTCCGACATGGATTTCTCGAAGAGATCGCCGGATTCTGGAGAGCTCGGGTGACCAATATGACCCGAGTGAAATGCTGACAGTATCTGCAGATGGTAGTGGGAACTTCACCACCATCAGTGGTGCTGTTAATTTTGCTCCAAATAATAGTTACGACAGGACTATCATCTATGTCAAAGAAGGGGTTTATGATGAAAATGTGGAAATCCCAAGCTGGAAGACAAACATTGTTCTTCTTGGAGATGGAAGTGGCATCACTGTCATCACTGGTAACAGAAGCAATGCTGATGGTTGGACCACTTTCAGATCTGCAACAGTAGCTGTATCTGGGGAAGGCTTTCTGGCAAGAGACATAAGTATTGAAAACAGAGCAGGACCAGAGAAGCACCAAGCAGTTGCATTGAGAGTAAATGCAGACCTTGCTGCATTGTACAAGTGCGCCTTCAGCGGTTACCAAGACACAATGTATGTGCACTCTTTCAGACAGTTTTATAGAGAGTGTGATATCTCAGGGACCATAGACTACATATTTGGTAACGCCGCTGTGGTAATCCAAGATTGCAACATTATATCCAAGATGCCAATGCCGGGACAGTTCACCGTTATCACAGCACAAGCCAGGGACTCCGAAGAGGAGGATACCGGAATCTCAATACAGAATTGTTCAATCGTGGCTGCTGATGACTTGTACGCCAACAAGGACAGTGTCAAAAGTTACTTAGGCCGGCCGTGGAGGGTATACTCTAGGACAGTTTTCCTAGAGTCCTACATTGATGACTTCATTGACCCCAGTGGGTGGACAAATTGGTCTGGGGACCTAGGCTTGGACACTTTGTACTATGGAGAGTTTGAAAATTATGGACCTGGTTCAGGGACGGAGAGTAGAGTAAACTGGACAGGGTATCATATTATGGATTACTATGATGCATCAAATTTCACAGTATCAGAGTTCATTGCAGGTGATGAATGGCTGCAGTCCACTTCATTTCCTTATGATGATGGGATTGATGGCATCTGA

Protein Analysis

549

Amino Acids

60.49

Weight (kDa)

5.35

Isoelectric Point (pI)

43.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMEI PF04043 45 - 192 4.5e-25 Plant invertase/pectin methylesterase inhibitor
Pectinesterase PF01095 238 - 532 5.8e-137 Pectinesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014883)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G26440
fragaria_vesca FvH4_1g09580
malus_domestica MD02G1104400.v1.1 MD02G1104500.v1.1 MD15G1224800.v1.1
prunus_persica Prupe.7G190400_v2.0.a1
pyrus_communis pycom02g08230
rosa_chinensis RchiOBHm_Chr2g0096441
rosa_laevigata RLG00000016640
rosa_multiflora Rmu_sc0004096.1_g000025
rosa_roxburghii Rroxscaffold_2G00145650
rosa_samantha Rh2AG104700 Rh2BG106900 Rh2CG108700 Rh2DG107800
rosa_wichuraiana Rw2G008090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1580
AasI GACNNNNNNGTC 1 cut(s) 1438
Acc36I ACCTGC 1 cut(s) 1580
AccB7I CCANNNNNTGG 1 cut(s) 1428
AccI GTMKAC 1 cut(s) 1371
AccII CGCG 1 cut(s) 260
AciI CCGC 3 cut(s) 79, 1080, 1173
AcoI YGGCCR 2 cut(s) 607, 1358
AcsI RAATTY 1 cut(s) 1564
AcuI CTGAAG 2 cut(s) 212, 1060
AcyI GRCGYC 1 cut(s) 622
AfaI GTAC 4 cut(s) 547, 1064, 1322, 1469
AfiI CCNNNNNNNGG 5 cut(s) 670, 1220, 1428, 1456, 1502
AgsI TTSAA 3 cut(s) 995, 1299, 1484
AhlI ACTAGT 1 cut(s) 542
AjnI CCWGG 4 cut(s) 345, 525, 1250, 1495
AjuI GAANNNNNNNTTGG 2 cut(s) 467, 499
AluBI AGCT 6 cut(s) 196, 280, 534, 678, 846, 953
AluI AGCT 6 cut(s) 196, 280, 534, 678, 846, 953
Alw21I GWGCWC 2 cut(s) 680, 1107
Alw26I GTCTC 1 cut(s) 975
Alw44I GTGCAC 1 cut(s) 1103
AlwNI CAGNNNCTG 3 cut(s) 401, 719, 953
Ama87I CYCGRG 2 cut(s) 679, 697
AoxI GGCC 3 cut(s) 607, 1354, 1358
ApaLI GTGCAC 1 cut(s) 1103
ApeKI GCWGC 4 cut(s) 458, 1055, 1307, 1603
ApoI RAATTY 1 cut(s) 1564
ArsI GACNNNNNNTTYG 2 cut(s) 1145, 1177
Asp700I GAANNNNTTC 1 cut(s) 969
AspA2I CCTAGG 1 cut(s) 1450
AspLEI GCGC 2 cut(s) 262, 1073
AspS9I GGNCC 6 cut(s) 509, 927, 1007, 1146, 1447, 1493
AsuC2I CCSGG 1 cut(s) 1221
AsuHPI GGTGA 5 cut(s) 274, 695, 733, 1222, 1604
AsuII TTCGAA 1 cut(s) 416
AvaI CYCGRG 2 cut(s) 679, 697
AvaII GGWCC 6 cut(s) 509, 927, 1007, 1146, 1447, 1493
AvrII CCTAGG 1 cut(s) 1450
BaeGI GKGCMC 1 cut(s) 1107
BanII GRGCYC 1 cut(s) 680
BbsI GAAGAC 3 cut(s) 126, 405, 857
Bbv12I GWGCWC 2 cut(s) 680, 1107
BbvI GCAGC 4 cut(s) 445, 1042, 1294, 1590
BccI CCATC 8 cut(s) 20, 215, 719, 755, 869, 914, 1625, 1634
BceAI ACGGC 2 cut(s) 622, 1345
BcgI CGANNNNNNTGC 2 cut(s) 688, 722
BciT130I CCWGG 4 cut(s) 347, 527, 1252, 1497
BciVI GTATCC 1 cut(s) 1264
BcnI CCSGG 1 cut(s) 1221
BcoDI GTCTC 1 cut(s) 975
BcuI ACTAGT 1 cut(s) 542
BfaI CTAG 4 cut(s) 543, 1377, 1391, 1451
BfmI CTRYAG 2 cut(s) 720, 1604
BfuAI ACCTGC 1 cut(s) 1580
BfuI GTATCC 1 cut(s) 1264
BglII AGATCT 1 cut(s) 938
BisI GCNGC 5 cut(s) 459, 1056, 1173, 1308, 1604
BlnI CCTAGG 1 cut(s) 1450
BlsI GCNGC 5 cut(s) 460, 1057, 1174, 1309, 1605
Bme1390I CCNGG 5 cut(s) 347, 527, 1221, 1252, 1497
Bme18I GGWCC 6 cut(s) 509, 927, 1007, 1146, 1447, 1493
BmeT110I CYCGRG 2 cut(s) 679, 697
BmgT120I GGNCC 6 cut(s) 509, 927, 1007, 1146, 1447, 1493
BmiI GGNNCC 2 cut(s) 1147, 1448
BmrFI CCNGG 5 cut(s) 347, 527, 1221, 1252, 1497
BmrI ACTGGG 1 cut(s) 1416
BmsI GCATC 5 cut(s) 427, 894, 1200, 1546, 1568
BmuI ACTGGG 1 cut(s) 1416
BpiI GAAGAC 3 cut(s) 126, 405, 857
BplI GAGNNNNNCTC 2 cut(s) 435, 467
BpmI CTGGAG 2 cut(s) 423, 692
Bpu14I TTCGAA 1 cut(s) 416
BpuMI CCSGG 1 cut(s) 1221
BsaHI GRCGYC 1 cut(s) 622
BsaJI CCNNGG 4 cut(s) 525, 1251, 1361, 1450
BsaWI WCCGGW 1 cut(s) 1274
Bsc4I CCNNNNNNNGG 5 cut(s) 670, 1220, 1428, 1456, 1502
Bse118I RCCGGY 2 cut(s) 618, 1356
Bse1I ACTGG 3 cut(s) 904, 1422, 1529
Bse3DI GCAATG 2 cut(s) 919, 1584
BseBI CCWGG 4 cut(s) 347, 527, 1252, 1497
BseDI CCNNGG 4 cut(s) 525, 1251, 1361, 1450
BseGI GGATG 3 cut(s) 12, 225, 442
BseLI CCNNNNNNNGG 5 cut(s) 670, 1220, 1428, 1456, 1502
BseMI GCAATG 2 cut(s) 919, 1584
BseMII CTCAG 2 cut(s) 466, 1155
BseNI ACTGG 3 cut(s) 904, 1422, 1529
BseRI GAGGAG 2 cut(s) 230, 1280
BseSI GKGCMC 1 cut(s) 1107
BseX3I CGGCCG 1 cut(s) 1358
BseXI GCAGC 4 cut(s) 445, 1042, 1294, 1590
Bsh1236I CGCG 1 cut(s) 260
Bsh1285I CGRYCG 1 cut(s) 1361
BshFI GGCC 3 cut(s) 609, 1356, 1360
BsiEI CGRYCG 1 cut(s) 1361
BsiHKAI GWGCWC 2 cut(s) 680, 1107
BsiHKCI CYCGRG 2 cut(s) 679, 697
BsiSI CCGG 5 cut(s) 619, 664, 1220, 1275, 1357
BslFI GGGAC 5 cut(s) 1159, 1236, 1268, 1460, 1519
BslI CCNNNNNNNGG 5 cut(s) 670, 1220, 1428, 1456, 1502
BsmAI GTCTC 1 cut(s) 975
BsmFI GGGAC 5 cut(s) 1159, 1236, 1268, 1460, 1519
BsnI GGCC 3 cut(s) 609, 1356, 1360
BsoBI CYCGRG 2 cut(s) 679, 697
Bsp119I TTCGAA 1 cut(s) 416
Bsp1286I GDGCHC 2 cut(s) 680, 1107
Bsp1407I TGTACA 1 cut(s) 1062
Bsp143I GATC 5 cut(s) 286, 369, 392, 658, 938
BspACI CCGC 3 cut(s) 79, 1080, 1173
BspANI GGCC 3 cut(s) 609, 1356, 1360
BspCNI CTCAG 2 cut(s) 465, 1154
BspFNI CGCG 1 cut(s) 260
BspLI GGNNCC 2 cut(s) 1147, 1448
BspMAI CTGCAG 2 cut(s) 724, 1608
BspMI ACCTGC 1 cut(s) 1580
BspT104I TTCGAA 1 cut(s) 416
BsrDI GCAATG 2 cut(s) 919, 1584
BsrFI RCCGGY 2 cut(s) 618, 1356
BsrGI TGTACA 1 cut(s) 1062
BsrI ACTGG 3 cut(s) 904, 1422, 1529
BssAI RCCGGY 2 cut(s) 618, 1356
BssECI CCNNGG 4 cut(s) 525, 1251, 1361, 1450
BssMI GATC 5 cut(s) 286, 369, 392, 658, 938
BssNAI GTATAC 1 cut(s) 1372
BssNI GRCGYC 1 cut(s) 622
BssT1I CCWWGG 1 cut(s) 1450
Bst1107I GTATAC 1 cut(s) 1372
Bst2UI CCWGG 4 cut(s) 347, 527, 1252, 1497
Bst4CI ACNGT 9 cut(s) 715, 892, 949, 1119, 1227, 1234, 1337, 1384, 1573
Bst6I CTCTTC 3 cut(s) 385, 649, 1257
BstACI GRCGYC 1 cut(s) 622
BstAPI GCANNNNNTGC 2 cut(s) 37, 1052
BstAUI TGTACA 1 cut(s) 1062
BstBI TTCGAA 1 cut(s) 416
BstC8I GCNNGC 1 cut(s) 1358
BstDEI CTNAG 5 cut(s) 69, 431, 452, 1141, 1351
BstDSI CCRYGG 1 cut(s) 1361
BstEII GGTNACC 2 cut(s) 683, 1082
BstENI CCTNNNNNAGG 1 cut(s) 1500
BstF5I GGATG 3 cut(s) 12, 225, 442
BstFNI CGCG 1 cut(s) 260
BstHHI GCGC 2 cut(s) 262, 1073
BstKTI GATC 5 cut(s) 289, 372, 395, 661, 941
BstMAI GTCTC 1 cut(s) 975
BstMBI GATC 5 cut(s) 286, 369, 392, 658, 938
BstMCI CGRYCG 1 cut(s) 1361
BstMWI GCNNNNNNNGC 5 cut(s) 37, 489, 950, 1052, 1077
BstNI CCWGG 4 cut(s) 347, 527, 1252, 1497
BstNSI RCATGY 1 cut(s) 483
BstPI GGTNACC 2 cut(s) 683, 1082
BstSCI CCNGG 5 cut(s) 345, 525, 1219, 1250, 1495
BstSFI CTRYAG 2 cut(s) 720, 1604
BstSLI GKGCMC 1 cut(s) 1107
BstUI CGCG 1 cut(s) 260
BstV1I GCAGC 4 cut(s) 445, 1042, 1294, 1590
BstV2I GAAGAC 3 cut(s) 126, 405, 857
BstX2I RGATCY 1 cut(s) 938
BstYI RGATCY 1 cut(s) 938
BstZ17I GTATAC 1 cut(s) 1372
BstZI CGGCCG 1 cut(s) 1358
BsuI GTATCC 1 cut(s) 1264
BsuRI GGCC 3 cut(s) 609, 1356, 1360
BtgI CCRYGG 1 cut(s) 1361
BtsCI GGATG 3 cut(s) 12, 225, 442
BtsIMutI CAGTG 7 cut(s) 188, 460, 757, 888, 897, 1342, 1429
BveI ACCTGC 1 cut(s) 1580
Cac8I GCNNGC 1 cut(s) 1358
CaiI CAGNNNCTG 3 cut(s) 401, 719, 953
CfoI GCGC 2 cut(s) 262, 1073
Cfr10I RCCGGY 2 cut(s) 618, 1356
Cfr13I GGNCC 6 cut(s) 509, 927, 1007, 1146, 1447, 1493
CseI GACGC 1 cut(s) 611
CsiI ACCWGGT 1 cut(s) 1495
Csp6I GTAC 4 cut(s) 546, 1063, 1321, 1468
CviAII CATG 2 cut(s) 480, 642
CviQI GTAC 4 cut(s) 546, 1063, 1321, 1468
DdeI CTNAG 5 cut(s) 69, 431, 452, 1141, 1351
DpnI GATC 5 cut(s) 288, 371, 394, 660, 940
DpnII GATC 5 cut(s) 286, 369, 392, 658, 938
DrdI GACNNNNNNGTC 1 cut(s) 1438
DseDI GACNNNNNNGTC 1 cut(s) 1438
EaeI YGGCCR 2 cut(s) 607, 1358
EagI CGGCCG 1 cut(s) 1358
Eam1104I CTCTTC 3 cut(s) 385, 649, 1257
EarI CTCTTC 3 cut(s) 385, 649, 1257
Ecl136II GAGCTC 1 cut(s) 678
EclXI CGGCCG 1 cut(s) 1358
Eco130I CCWWGG 1 cut(s) 1450
Eco24I GRGCYC 1 cut(s) 680
Eco32I GATATC 1 cut(s) 1138
Eco47I GGWCC 6 cut(s) 509, 927, 1007, 1146, 1447, 1493
Eco52I CGGCCG 1 cut(s) 1358
Eco53kI GAGCTC 1 cut(s) 678
Eco57I CTGAAG 2 cut(s) 212, 1060
Eco88I CYCGRG 2 cut(s) 679, 697
Eco91I GGTNACC 2 cut(s) 683, 1082
EcoICRI GAGCTC 1 cut(s) 678
EcoNI CCTNNNNNAGG 1 cut(s) 1500
EcoO109I RGGNCCY 1 cut(s) 1447
EcoO65I GGTNACC 2 cut(s) 683, 1082
EcoRII CCWGG 4 cut(s) 345, 525, 1250, 1495
EcoRV GATATC 1 cut(s) 1138
EcoT14I CCWWGG 1 cut(s) 1450
EcoT22I ATGCAT 1 cut(s) 1561
EcoT38I GRGCYC 1 cut(s) 680
ErhI CCWWGG 1 cut(s) 1450
FaeI CATG 2 cut(s) 483, 645
FalI AAGNNNNNCTT 2 cut(s) 1058, 1090
FaqI GGGAC 5 cut(s) 1159, 1236, 1268, 1460, 1519
FatI CATG 2 cut(s) 479, 641
FblI GTMKAC 1 cut(s) 1371
Fnu4HI GCNGC 5 cut(s) 459, 1056, 1173, 1308, 1604
FokI GGATG 2 cut(s) 212, 449
FriOI GRGCYC 1 cut(s) 680
FseI GGCCGGCC 1 cut(s) 1360
Fsp4HI GCNGC 5 cut(s) 459, 1056, 1173, 1308, 1604
FspBI CTAG 4 cut(s) 543, 1377, 1391, 1451
GlaI GCGC 2 cut(s) 261, 1072
GluI GCNGC 5 cut(s) 459, 1056, 1173, 1308, 1604
GsuI CTGGAG 2 cut(s) 423, 692
HaeIII GGCC 3 cut(s) 609, 1356, 1360
HapII CCGG 5 cut(s) 619, 664, 1220, 1275, 1357
HgaI GACGC 1 cut(s) 611
HhaI GCGC 2 cut(s) 262, 1073
Hin1I GRCGYC 1 cut(s) 622
Hin1II CATG 2 cut(s) 483, 645
Hin6I GCGC 2 cut(s) 260, 1071
HinP1I GCGC 2 cut(s) 260, 1071
HinfI GANTC 8 cut(s) 185, 405, 497, 586, 667, 1256, 1278, 1394
HpaII CCGG 5 cut(s) 619, 664, 1220, 1275, 1357
HphI GGTGA 5 cut(s) 274, 695, 733, 1222, 1604
Hpy166II GTNNAC 7 cut(s) 159, 1105, 1230, 1372, 1431, 1522, 1611
Hpy188I TCNGA 7 cut(s) 268, 639, 938, 1115, 1261, 1579, 1649
Hpy188III TCNNGA 3 cut(s) 402, 651, 671
Hpy8I GTNNAC 7 cut(s) 159, 1105, 1230, 1372, 1431, 1522, 1611
HpyAV CCTTC 5 cut(s) 157, 482, 806, 959, 1084
HpyCH4III ACNGT 9 cut(s) 715, 892, 949, 1119, 1227, 1234, 1337, 1384, 1573
HpyF10VI GCNNNNNNNGC 5 cut(s) 37, 489, 950, 1052, 1077
HpyF3I CTNAG 5 cut(s) 69, 431, 452, 1141, 1351
Hsp92I GRCGYC 1 cut(s) 622
Hsp92II CATG 2 cut(s) 483, 645
HspAI GCGC 2 cut(s) 260, 1071
KroI GCCGGC 1 cut(s) 1356
KroNI GCCGGC 1 cut(s) 1358
Kzo9I GATC 5 cut(s) 286, 369, 392, 658, 938
LmnI GCTCC 3 cut(s) 338, 539, 775
Lsp1109I GCAGC 4 cut(s) 445, 1042, 1294, 1590
LweI GCATC 5 cut(s) 427, 894, 1200, 1546, 1568
MabI ACCWGGT 1 cut(s) 1495
MaeI CTAG 4 cut(s) 543, 1377, 1391, 1451
MaeIII GTNAC 6 cut(s) 683, 782, 902, 1082, 1166, 1346
MalI GATC 5 cut(s) 288, 371, 394, 660, 940
MboI GATC 5 cut(s) 286, 369, 392, 658, 938
MflI RGATCY 1 cut(s) 938
MhlI GDGCHC 2 cut(s) 680, 1107
MluCI AATT 6 cut(s) 82, 763, 1291, 1435, 1486, 1564
MlyI GAGTC 5 cut(s) 179, 414, 506, 1250, 1403
MmeI TCCRAC 3 cut(s) 339, 662, 905
Mph1103I ATGCAT 1 cut(s) 1561
MroNI GCCGGC 1 cut(s) 1356
MroXI GAANNNNTTC 1 cut(s) 969
MseI TTAA 3 cut(s) 141, 539, 762
MspA1I CMGCKG 2 cut(s) 1080, 1175
MspI CCGG 5 cut(s) 619, 664, 1220, 1275, 1357
MspR9I CCNGG 5 cut(s) 347, 527, 1221, 1252, 1497
MvaI CCWGG 4 cut(s) 347, 527, 1252, 1497
MvnI CGCG 1 cut(s) 260
MwoI GCNNNNNNNGC 5 cut(s) 37, 489, 950, 1052, 1077
NaeI GCCGGC 1 cut(s) 1358
NciI CCSGG 1 cut(s) 1221
NdeII GATC 5 cut(s) 286, 369, 392, 658, 938
NgoMIV GCCGGC 1 cut(s) 1356
NlaIII CATG 2 cut(s) 483, 645
NlaIV GGNNCC 2 cut(s) 1147, 1448
NmuCI GTSAC 1 cut(s) 683
NsiI ATGCAT 1 cut(s) 1561
NspI RCATGY 1 cut(s) 483
NspV TTCGAA 1 cut(s) 416
PaqCI CACCTGC 1 cut(s) 1580
PcsI WCGNNNNNNNCGW 1 cut(s) 264
PdiI GCCGGC 1 cut(s) 1358
PdmI GAANNNNTTC 1 cut(s) 969
PfeI GAWTC 3 cut(s) 586, 667, 1278
PflFI GACNNNGTC 1 cut(s) 1337
PflMI CCANNNNNTGG 1 cut(s) 1428
PfoI TCCNGGA 1 cut(s) 345
PkrI GCNGC 5 cut(s) 460, 1057, 1174, 1309, 1605
PleI GAGTC 5 cut(s) 179, 413, 505, 1250, 1402
PpsI GAGTC 5 cut(s) 179, 413, 505, 1250, 1402
PpuMI RGGWCCY 1 cut(s) 1447
Psp124BI GAGCTC 1 cut(s) 680
Psp5II RGGWCCY 1 cut(s) 1447
Psp6I CCWGG 4 cut(s) 345, 525, 1250, 1495
PspEI GGTNACC 2 cut(s) 683, 1082
PspGI CCWGG 4 cut(s) 345, 525, 1250, 1495
PspN4I GGNNCC 2 cut(s) 1147, 1448
PspPI GGNCC 6 cut(s) 509, 927, 1007, 1146, 1447, 1493
PspPPI RGGWCCY 1 cut(s) 1447
PstI CTGCAG 2 cut(s) 724, 1608
PstNI CAGNNNCTG 3 cut(s) 401, 719, 953
PsuI RGATCY 1 cut(s) 938
PsyI GACNNNGTC 1 cut(s) 1337
RigI GGCCGGCC 1 cut(s) 1360
RsaI GTAC 4 cut(s) 547, 1064, 1322, 1469
RsaNI GTAC 4 cut(s) 546, 1063, 1321, 1468
SacI GAGCTC 1 cut(s) 680
SaqAI TTAA 3 cut(s) 141, 539, 762
SatI GCNGC 5 cut(s) 459, 1056, 1173, 1308, 1604
Sau3AI GATC 5 cut(s) 286, 369, 392, 658, 938
Sau96I GGNCC 6 cut(s) 509, 927, 1007, 1146, 1447, 1493
SchI GAGTC 5 cut(s) 179, 414, 506, 1250, 1403
ScrFI CCNGG 5 cut(s) 347, 527, 1221, 1252, 1497
SduI GDGCHC 2 cut(s) 680, 1107
SexAI ACCWGGT 1 cut(s) 1495
SfaNI GCATC 5 cut(s) 427, 894, 1200, 1546, 1568
SfcI CTRYAG 2 cut(s) 720, 1604
SfuI TTCGAA 1 cut(s) 416
SinI GGWCC 6 cut(s) 509, 927, 1007, 1146, 1447, 1493
SpeI ACTAGT 1 cut(s) 542
Sse9I AATT 6 cut(s) 82, 763, 1291, 1435, 1486, 1564
SsiI CCGC 3 cut(s) 79, 1080, 1173
SspMI CTAG 4 cut(s) 543, 1377, 1391, 1451
SstI GAGCTC 1 cut(s) 680
StyD4I CCNGG 5 cut(s) 345, 525, 1219, 1250, 1495
StyI CCWWGG 1 cut(s) 1450
TaaI ACNGT 9 cut(s) 715, 892, 949, 1119, 1227, 1234, 1337, 1384, 1573
TaqI TCGA 3 cut(s) 183, 416, 652
TasI AATT 6 cut(s) 82, 763, 1291, 1435, 1486, 1564
TatI WGTACW 3 cut(s) 545, 1062, 1467
TauI GCSGC 1 cut(s) 1175
TfiI GAWTC 3 cut(s) 586, 667, 1278
Tru1I TTAA 3 cut(s) 141, 539, 762
Tru9I TTAA 3 cut(s) 141, 539, 762
TscAI CASTG 7 cut(s) 195, 460, 757, 895, 904, 1342, 1429
TseFI GTSAC 1 cut(s) 683
TseI GCWGC 4 cut(s) 458, 1055, 1307, 1603
Tsp45I GTSAC 1 cut(s) 683
TspDTI ATGAA 7 cut(s) 87, 530, 840, 1402, 1573, 1605, 1611
TspGWI ACGGA 1 cut(s) 1523
TspRI CASTG 7 cut(s) 195, 460, 757, 895, 904, 1342, 1429
Tth111I GACNNNGTC 1 cut(s) 1337
Van91I CCANNNNNTGG 1 cut(s) 1428
VneI GTGCAC 1 cut(s) 1103
VpaK11BI GGWCC 6 cut(s) 509, 927, 1007, 1146, 1447, 1493
XagI CCTNNNNNAGG 1 cut(s) 1500
XapI RAATTY 1 cut(s) 1564
XceI RCATGY 1 cut(s) 483
XmaJI CCTAGG 1 cut(s) 1450
XmiI GTMKAC 1 cut(s) 1371
XmnI GAANNNNTTC 1 cut(s) 969
XspI CTAG 4 cut(s) 543, 1377, 1391, 1451
Zsp2I ATGCAT 1 cut(s) 1561
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.