Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0008276

Physical Location & Seq

Genomic Coordinates Forward (+)

26965706 .. 26977654

Gene Structure 11949 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1291500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGGTAGCAACACCGCTCCACCTCCCCACCTCCGCCGTCCTCCTCCTATTCTTCTTAGAGATGGAGCTTTGGTGTCTGGTCTCGCCCAATCCCAGCAGCCCCGCCCCCCTTCTCCACTCACTCCCAGCCATGGTCTTACCTCTCTACCACTTCACTCCCAATTCGTCGTCCCGGACCTCATCGTTATCCAATCCTCGGCGCCTACTCGGGAGATCGGAGTCCCTCAGCCGGCCCAATGCCCGCATGAGCCTCTACGACGATCTCCTCCGCAACGGGTACTATACAACGCGGCTCTGGATCGGAACGCCTCCGCAGAAGTTTGCTCTAATTGTGGATACCGGGAGCACTGTGACTTATGTACCTTGCTCTTCTTGCAAACAGTGCGGCAGACACCAGGACCCCAAATTTGATCCAGAAGCCTCGAACACTTACCAAGCTGTCAAATGCAACATAGATTGCAATTGTGATAATCAGAGGGTGAATTGTATTTACGAGAGGCAATATGCCGAAATGAGTAGTAGCAGTGGGGTGCTTGGTGAGGATCTTATATCATTTGGCAATCAAAGTGAACTACCACCTCAACGTGCAGTTTTCGGTTGTGAAAATTTTGAAACTGGTGACCTTTACAGCCAGCCTGCTGATGGCATAATGGGATTGGGCCGTGGTGATCTTAGTGTGGTTGACCAACTAGTTGATAAAAGTGTAATAAGTGATTCTTTCTCATTATGTTATGGTGGAATGGACATTGGTGGAGGTGCAATGGTTCTTGGTGGTTTTTCAGCCCCATCAGACATGGTCTTCACTCATTCAAACCCAGTACGAAGTCCATACTACAATATTGATTTGAAGGAGATGCATGTCGCGGGAAAGCGATTGCCTTTGAATCCAAATGTCTTTGATGGAAAACATGGAACAGTCTTGGACAGTGGTACAACATATGCATACCTACCAGAAGCAGCATTTCTTGCATTTAAGGATGCTATCATGAAAGAGCTTAATTCCCTCGAGCAAATCCGTGGCCCTGATCCAAATTATAAGGATATCTGTTTTTCAACTGCTGGAAGTGATATCTCCTACCCATCAGACACCTTTCCAGCAGTTGACATGGTATTTGGCAATGGGCAGAAGCTGACACTATCTCCTGAAAATTATTTATTCAGGCATTCAAAGGTCCCGGGTGCATACTGCCTGGGGATTTTTCAAAACGGAAAGGATCCAACTACTCTTCTTGGAGGAATTGTTGTCCGCAATACTCTTGTAACGTATGACCGTGAGCATTCCAAGATTGGTTTCTGGAAAACTAATTGTTCAGAGTTGTGGGAAAGACTTAACGAATCTGTTTCGCCTCGGCCAATGCCTCCTGCTTCAGATGAAAAGAATTCAACTACAGAAGGAATGCCTACATTAGCTCCAAATGGAGCACCATCTTATGCACTTCCAGGGGAACAGAAAATTGGAAAAATAACATTTGACATGTCATTGAACATCAGCTACTCTGATCTGAAGCCCCACATCACAGAACTAGCTGAATTTATAGCTCAGGAATTAGAAGTTAATACATCACAGGTCCATTTGTTGAAATTTACTACCAGTGGAAACGACTCCCTCGTTAGATGGGCCATATTTCCTGCAGGTTCTACTGACAGTATTTCTAATACAACTGCGGTGGGTATAATTTCCAAGCTTTCCGAACATCATTTGAAGTTTCCTGTTATGTTTGGAACTTATGAGTTGCTTGGATGGAATGTTGAGACTAAGGACAAACGGTCATGGTGGCAGCGGAGTTATCTGGTGATTCTATCAATGTTAGGAATTCTAGTTATTGCACTAGCAGTTGTTGGATTTTGGTTTATGTGGAAACGTCGCCAACAAACAGTCAATCCCTACAAGCCTGTCAATGTTGCCGTACCAGAGCAAGAACTCCAGCCCCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005623 GO:0005886 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016020 GO:0016787 GO:0019538 GO:0030163 GO:0031224 GO:0031225 GO:0031226 GO:0043170 GO:0044238 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0070001 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

645

Amino Acids

71.23

Weight (kDa)

5.69

Isoelectric Point (pI)

48.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAXi_N	PF14543	94 - 258	1.5e-35	Xylanase inhibitor N-terminal
Asp	PF00026	94 - 431	6e-32	Eukaryotic aspartyl protease
TAXi_C	PF14541	278 - 431	6.1e-28	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008276)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50050
fragaria_vesca	FvH4_1g17040 FvH4_1g17040
malus_domestica	MD02G1180600.v1.1 MD15G1291500.v1.1
prunus_persica	Prupe.6G225700_v2.0.a1 Prupe.6G225700_v2.0.a1 Prupe.6G225700_v2.0.a1 Prupe.6G225700_v2.0.a1
pyrus_communis	pycom02g14650 pycom15g25500
rosa_chinensis	RchiOBHm_Chr2g0107201
rosa_laevigata	RLG00000017559
rosa_multiflora	Rmu_co8203904.1_g000001
rosa_roxburghii	Rroxscaffold_2G00136550 Rroxscaffold_7G00198230
rosa_rugosa	Rorug02G0140700 Rorug02G0140800
rosa_samantha	Rh2AG191500 Rh2BG203500 Rh2CG196700 Rh2DG198800
rosa_wichuraiana	Rw2G015140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1035
Acc36I	ACCTGC	1 cut(s)	1622
AccB1I	GGYRCC	1 cut(s)	198
AccBSI	CCGCTC	1 cut(s)	16
AccII	CGCG	2 cut(s)	289, 863
AclWI	GGATC	6 cut(s)	305, 404, 549, 1019, 1208, 1221
AcoI	YGGCCR	1 cut(s)	1349
AcsI	RAATTY	6 cut(s)	404, 604, 1378, 1529, 1580, 1812
AcuI	CTGAAG	2 cut(s)	1350, 1523
AcyI	GRCGYC	1 cut(s)	199
AfaI	GTAC	5 cut(s)	278, 360, 819, 931, 1908
AfiI	CCNNNNNNNGG	4 cut(s)	130, 195, 228, 641
AflIII	ACRYGT	1 cut(s)	1473
AhdI	GACNNNNNGTC	1 cut(s)	1765
AhlI	ACTAGT	1 cut(s)	688
AjnI	CCWGG	3 cut(s)	393, 1188, 1438
AjuI	GAANNNNNNNTTGG	4 cut(s)	1274, 1306, 1437, 1469
AluBI	AGCT	9 cut(s)	67, 437, 994, 1129, 1409, 1491, 1526, 1538, 1684
AluI	AGCT	9 cut(s)	67, 437, 994, 1129, 1409, 1491, 1526, 1538, 1684
Alw21I	GWGCWC	2 cut(s)	347, 1423
Alw26I	GTCTC	2 cut(s)	85, 1745
AlwI	GGATC	6 cut(s)	305, 404, 549, 1019, 1208, 1221
AlwNI	CAGNNNCTG	1 cut(s)	1129
Ama87I	CYCGRG	3 cut(s)	206, 1004, 1174
AoxI	GGCC	5 cut(s)	230, 658, 1018, 1349, 1617
ApeKI	GCWGC	3 cut(s)	96, 956, 1777
ApoI	RAATTY	6 cut(s)	404, 604, 1378, 1529, 1580, 1812
ArsI	GACNNNNNNTTYG	4 cut(s)	389, 421, 1094, 1126
AspLEI	GCGC	1 cut(s)	201
AspS9I	GGNCC	8 cut(s)	174, 231, 397, 658, 1019, 1171, 1567, 1617
AsuC2I	CCSGG	4 cut(s)	172, 340, 1175, 1176
AsuHPI	GGTGA	5 cut(s)	490, 548, 629, 677, 1804
AvaI	CYCGRG	3 cut(s)	206, 1004, 1174
AvaII	GGWCC	4 cut(s)	174, 397, 1171, 1567
BaeI	ACNNNNGTAYC	2 cut(s)	342, 375
BamHI	GGATCC	1 cut(s)	1213
BanI	GGYRCC	1 cut(s)	198
BbsI	GAAGAC	1 cut(s)	790
Bbv12I	GWGCWC	2 cut(s)	347, 1423
BbvCI	CCTCAGC	1 cut(s)	224
BbvI	GCAGC	3 cut(s)	108, 968, 1789
BccI	CCATC	8 cut(s)	55, 635, 793, 893, 1087, 1432, 1608, 1734
BceAI	ACGGC	3 cut(s)	20, 645, 1889
BciT130I	CCWGG	3 cut(s)	395, 1190, 1440
BciVI	GTATCC	1 cut(s)	328
BcnI	CCSGG	4 cut(s)	172, 340, 1175, 1176
BcoDI	GTCTC	2 cut(s)	85, 1745
BcuI	ACTAGT	1 cut(s)	688
BfaI	CTAG	4 cut(s)	689, 1523, 1817, 1829
BfmI	CTRYAG	2 cut(s)	1386, 1629
BfoI	RGCGCY	1 cut(s)	202
BfuAI	ACCTGC	1 cut(s)	1622
BfuI	GTATCC	1 cut(s)	328
BisI	GCNGC	5 cut(s)	97, 290, 385, 957, 1778
BlsI	GCNGC	5 cut(s)	98, 291, 386, 958, 1779
Bme1390I	CCNGG	7 cut(s)	172, 340, 395, 1175, 1176, 1190, 1440
Bme18I	GGWCC	4 cut(s)	174, 397, 1171, 1567
BmeRI	GACNNNNNGTC	1 cut(s)	1765
BmeT110I	CYCGRG	3 cut(s)	206, 1004, 1174
BmgT120I	GGNCC	8 cut(s)	174, 231, 397, 658, 1019, 1171, 1567, 1617
BmiI	GGNNCC	4 cut(s)	200, 399, 1173, 1215
BmrFI	CCNGG	7 cut(s)	172, 340, 395, 1175, 1176, 1190, 1440
BmrI	ACTGGG	1 cut(s)	809
BmsI	GCATC	2 cut(s)	843, 967
BmuI	ACTGGG	1 cut(s)	809
BpiI	GAAGAC	1 cut(s)	790
BpmI	CTGGAG	1 cut(s)	1907
Bpu10I	CCTNAGC	2 cut(s)	224, 1539
BpuMI	CCSGG	4 cut(s)	172, 340, 1175, 1176
BsaHI	GRCGYC	1 cut(s)	199
BsaI	GGTCTC	1 cut(s)	85
BsaJI	CCNNGG	8 cut(s)	129, 194, 661, 1015, 1174, 1189, 1346, 1439
BsaXI	ACNNNNNCTCC	8 cut(s)	56, 86, 1123, 1153, 1224, 1254, 1393, 1423
Bsc4I	CCNNNNNNNGG	4 cut(s)	130, 195, 228, 641
Bse118I	RCCGGY	1 cut(s)	228
Bse1I	ACTGG	3 cut(s)	619, 815, 1590
Bse3DI	GCAATG	2 cut(s)	765, 1123
BseBI	CCWGG	3 cut(s)	395, 1190, 1440
BseDI	CCNNGG	8 cut(s)	129, 194, 661, 1015, 1174, 1189, 1346, 1439
BseGI	GGATG	2 cut(s)	982, 1745
BseLI	CCNNNNNNNGG	4 cut(s)	130, 195, 228, 641
BseMI	GCAATG	2 cut(s)	765, 1123
BseMII	CTCAG	2 cut(s)	238, 1553
BseNI	ACTGG	3 cut(s)	619, 815, 1590
BseRI	GAGGAG	2 cut(s)	32, 254
BseXI	GCAGC	3 cut(s)	108, 968, 1789
BseYI	CCCAGC	2 cut(s)	92, 124
BsgI	GTGCAG	1 cut(s)	606
Bsh1236I	CGCG	2 cut(s)	289, 863
BshFI	GGCC	5 cut(s)	232, 660, 1020, 1351, 1619
BshNI	GGYRCC	1 cut(s)	198
BsiHKAI	GWGCWC	2 cut(s)	347, 1423
BsiHKCI	CYCGRG	3 cut(s)	206, 1004, 1174
BsiSI	CCGG	4 cut(s)	172, 229, 339, 1175
BslFI	GGGAC	3 cut(s)	154, 205, 1157
BslI	CCNNNNNNNGG	4 cut(s)	130, 195, 228, 641
BsmAI	GTCTC	2 cut(s)	85, 1745
BsmFI	GGGAC	3 cut(s)	154, 205, 1157
BsmI	GAATGC	3 cut(s)	1162, 1276, 1401
BsnI	GGCC	5 cut(s)	232, 660, 1020, 1351, 1619
Bso31I	GGTCTC	1 cut(s)	85
BsoBI	CYCGRG	3 cut(s)	206, 1004, 1174
Bsp1286I	GDGCHC	2 cut(s)	347, 1423
Bsp143I	GATC	9 cut(s)	212, 259, 297, 409, 541, 667, 1024, 1213, 1498
Bsp19I	CCATGG	1 cut(s)	129
BspANI	GGCC	5 cut(s)	232, 660, 1020, 1351, 1619
BspCNI	CTCAG	2 cut(s)	237, 1552
BspFNI	CGCG	2 cut(s)	289, 863
BspHI	TCATGA	1 cut(s)	984
BspLI	GGNNCC	4 cut(s)	200, 399, 1173, 1215
BspMAI	CTGCAG	1 cut(s)	1633
BspMI	ACCTGC	1 cut(s)	1622
BspPI	GGATC	6 cut(s)	305, 404, 549, 1019, 1208, 1221
BspQI	GCTCTTC	1 cut(s)	373
BspT107I	GGYRCC	1 cut(s)	198
BspTNI	GGTCTC	1 cut(s)	85
BsrBI	CCGCTC	1 cut(s)	16
BsrDI	GCAATG	2 cut(s)	765, 1123
BsrFI	RCCGGY	1 cut(s)	228
BsrI	ACTGG	3 cut(s)	619, 815, 1590
BssAI	RCCGGY	1 cut(s)	228
BssECI	CCNNGG	8 cut(s)	129, 194, 661, 1015, 1174, 1189, 1346, 1439
BssMI	GATC	9 cut(s)	212, 259, 297, 409, 541, 667, 1024, 1213, 1498
BssNI	GRCGYC	1 cut(s)	199
BssT1I	CCWWGG	1 cut(s)	129
Bst2UI	CCWGG	3 cut(s)	395, 1190, 1440
Bst4CI	ACNGT	8 cut(s)	349, 381, 916, 926, 1271, 1646, 1767, 1876
Bst6I	CTCTTC	2 cut(s)	373, 1230
BstACI	GRCGYC	1 cut(s)	199
BstAPI	GCANNNNNTGC	2 cut(s)	381, 965
BstC8I	GCNNGC	4 cut(s)	230, 241, 632, 636
BstDEI	CTNAG	5 cut(s)	55, 224, 671, 1539, 1755
BstDSI	CCRYGG	3 cut(s)	129, 661, 1015
BstEII	GGTNACC	1 cut(s)	617
BstF5I	GGATG	2 cut(s)	982, 1745
BstFNI	CGCG	2 cut(s)	289, 863
BstH2I	RGCGCY	1 cut(s)	202
BstHHI	GCGC	1 cut(s)	201
BstKTI	GATC	9 cut(s)	215, 262, 300, 412, 544, 670, 1027, 1216, 1501
BstMAI	GTCTC	2 cut(s)	85, 1745
BstMBI	GATC	9 cut(s)	212, 259, 297, 409, 541, 667, 1024, 1213, 1498
BstMWI	GCNNNNNNNGC	3 cut(s)	372, 381, 965
BstNI	CCWGG	3 cut(s)	395, 1190, 1440
BstNSI	RCATGY	2 cut(s)	860, 1477
BstPI	GGTNACC	1 cut(s)	617
BstSCI	CCNGG	7 cut(s)	170, 338, 393, 1173, 1174, 1188, 1438
BstSFI	CTRYAG	2 cut(s)	1386, 1629
BstUI	CGCG	2 cut(s)	289, 863
BstV1I	GCAGC	3 cut(s)	108, 968, 1789
BstV2I	GAAGAC	1 cut(s)	790
BstX2I	RGATCY	2 cut(s)	541, 1213
BstYI	RGATCY	2 cut(s)	541, 1213
BsuI	GTATCC	1 cut(s)	328
BsuRI	GGCC	5 cut(s)	232, 660, 1020, 1351, 1619
BtgI	CCRYGG	3 cut(s)	129, 661, 1015
BtsCI	GGATG	2 cut(s)	982, 1745
BtsI	GCAGTG	1 cut(s)	529
BtsIMutI	CAGTG	5 cut(s)	345, 386, 529, 931, 1597
BveI	ACCTGC	1 cut(s)	1622
Cac8I	GCNNGC	4 cut(s)	230, 241, 632, 636
CaiI	CAGNNNCTG	1 cut(s)	1129
CciI	TCATGA	1 cut(s)	984
CfoI	GCGC	1 cut(s)	201
Cfr10I	RCCGGY	1 cut(s)	228
Cfr13I	GGNCC	8 cut(s)	174, 231, 397, 658, 1019, 1171, 1567, 1617
Cfr9I	CCCGGG	1 cut(s)	1174
Csp6I	GTAC	5 cut(s)	277, 359, 818, 930, 1907
CspCI	CAANNNNNGTGG	2 cut(s)	1647, 1682
CviAII	CATG	9 cut(s)	130, 244, 793, 857, 908, 985, 1105, 1474, 1770
CviQI	GTAC	5 cut(s)	277, 359, 818, 930, 1907
DdeI	CTNAG	5 cut(s)	55, 224, 671, 1539, 1755
DinI	GGCGCC	1 cut(s)	200
DpnI	GATC	9 cut(s)	214, 261, 299, 411, 543, 669, 1026, 1215, 1500
DpnII	GATC	9 cut(s)	212, 259, 297, 409, 541, 667, 1024, 1213, 1498
DriI	GACNNNNNGTC	1 cut(s)	1765
EaeI	YGGCCR	1 cut(s)	1349
Eam1104I	CTCTTC	2 cut(s)	373, 1230
Eam1105I	GACNNNNNGTC	1 cut(s)	1765
EarI	CTCTTC	2 cut(s)	373, 1230
EciI	GGCGGA	1 cut(s)	22
Eco130I	CCWWGG	1 cut(s)	129
Eco31I	GGTCTC	1 cut(s)	85
Eco32I	GATATC	2 cut(s)	1042, 1069
Eco47I	GGWCC	4 cut(s)	174, 397, 1171, 1567
Eco57I	CTGAAG	2 cut(s)	1350, 1523
Eco88I	CYCGRG	3 cut(s)	206, 1004, 1174
Eco91I	GGTNACC	1 cut(s)	617
EcoO109I	RGGNCCY	2 cut(s)	397, 1171
EcoO65I	GGTNACC	1 cut(s)	617
EcoRI	GAATTC	2 cut(s)	1378, 1812
EcoRII	CCWGG	3 cut(s)	393, 1188, 1438
EcoRV	GATATC	2 cut(s)	1042, 1069
EcoT14I	CCWWGG	1 cut(s)	129
EcoT22I	ATGCAT	2 cut(s)	858, 943
EgeI	GGCGCC	1 cut(s)	200
EheI	GGCGCC	1 cut(s)	200
ErhI	CCWWGG	1 cut(s)	129
FaeI	CATG	9 cut(s)	133, 247, 796, 860, 911, 988, 1108, 1477, 1773
FalI	AAGNNNNNCTT	2 cut(s)	700, 732
FaqI	GGGAC	3 cut(s)	154, 205, 1157
FatI	CATG	9 cut(s)	129, 243, 792, 856, 907, 984, 1104, 1473, 1769
FauI	CCCGC	3 cut(s)	109, 248, 856
FauNDI	CATATG	1 cut(s)	937
Fnu4HI	GCNGC	5 cut(s)	97, 290, 385, 957, 1778
FokI	GGATG	2 cut(s)	989, 1752
Fsp4HI	GCNGC	5 cut(s)	97, 290, 385, 957, 1778
FspBI	CTAG	4 cut(s)	689, 1523, 1817, 1829
GlaI	GCGC	1 cut(s)	200
GluI	GCNGC	5 cut(s)	97, 290, 385, 957, 1778
GsaI	CCCAGC	2 cut(s)	96, 128
GsuI	CTGGAG	1 cut(s)	1907
HaeII	RGCGCY	1 cut(s)	202
HaeIII	GGCC	5 cut(s)	232, 660, 1020, 1351, 1619
HapII	CCGG	4 cut(s)	172, 229, 339, 1175
HhaI	GCGC	1 cut(s)	201
Hin1I	GRCGYC	1 cut(s)	199
Hin1II	CATG	9 cut(s)	133, 247, 796, 860, 911, 988, 1108, 1477, 1773
Hin6I	GCGC	1 cut(s)	199
HinP1I	GCGC	1 cut(s)	199
HincII	GTYRAC	2 cut(s)	682, 1102
HindII	GTYRAC	2 cut(s)	682, 1102
HindIII	AAGCTT	1 cut(s)	1682
HinfI	GANTC	6 cut(s)	218, 713, 883, 1334, 1601, 1795
HpaII	CCGG	4 cut(s)	172, 229, 339, 1175
HphI	GGTGA	5 cut(s)	490, 548, 629, 677, 1804
Hpy166II	GTNNAC	3 cut(s)	569, 682, 1102
Hpy188III	TCNNGA	7 cut(s)	208, 295, 413, 985, 1142, 1294, 1541
Hpy8I	GTNNAC	3 cut(s)	569, 682, 1102
Hpy99I	CGWCG	3 cut(s)	169, 260, 1866
HpyAV	CCTTC	3 cut(s)	119, 841, 1385
HpyCH4III	ACNGT	8 cut(s)	349, 381, 916, 926, 1271, 1646, 1767, 1876
HpyCH4IV	ACGT	3 cut(s)	583, 1262, 1861
HpyF10VI	GCNNNNNNNGC	3 cut(s)	372, 381, 965
HpyF3I	CTNAG	5 cut(s)	55, 224, 671, 1539, 1755
HpySE526I	ACGT	3 cut(s)	583, 1262, 1861
Hsp92I	GRCGYC	1 cut(s)	199
Hsp92II	CATG	9 cut(s)	133, 247, 796, 860, 911, 988, 1108, 1477, 1773
HspAI	GCGC	1 cut(s)	199
KasI	GGCGCC	1 cut(s)	198
KroI	GCCGGC	1 cut(s)	228
KroNI	GCCGGC	1 cut(s)	230
Kzo9I	GATC	9 cut(s)	212, 259, 297, 409, 541, 667, 1024, 1213, 1498
LguI	GCTCTTC	1 cut(s)	373
LmnI	GCTCC	5 cut(s)	21, 64, 342, 1414, 1418
Lsp1109I	GCAGC	3 cut(s)	108, 968, 1789
LweI	GCATC	2 cut(s)	843, 967
MaeI	CTAG	4 cut(s)	689, 1523, 1817, 1829
MaeII	ACGT	3 cut(s)	583, 1262, 1861
MaeIII	GTNAC	3 cut(s)	349, 617, 1258
MalI	GATC	9 cut(s)	214, 261, 299, 411, 543, 669, 1026, 1215, 1500
MbiI	CCGCTC	1 cut(s)	16
MboI	GATC	9 cut(s)	212, 259, 297, 409, 541, 667, 1024, 1213, 1498
MboII	GAAGA	4 cut(s)	43, 360, 790, 1217
MfeI	CAATTG	1 cut(s)	460
MflI	RGATCY	2 cut(s)	541, 1213
MhlI	GDGCHC	2 cut(s)	347, 1423
Mly113I	GGCGCC	1 cut(s)	199
MlyI	GAGTC	2 cut(s)	227, 1595
MmeI	TCCRAC	2 cut(s)	1241, 1819
Mph1103I	ATGCAT	2 cut(s)	858, 943
MroNI	GCCGGC	1 cut(s)	228
MseI	TTAA	4 cut(s)	972, 996, 1329, 1554
MspA1I	CMGCKG	1 cut(s)	1780
MspI	CCGG	4 cut(s)	172, 229, 339, 1175
MspR9I	CCNGG	7 cut(s)	172, 340, 395, 1175, 1176, 1190, 1440
MunI	CAATTG	1 cut(s)	460
Mva1269I	GAATGC	3 cut(s)	1162, 1276, 1401
MvaI	CCWGG	3 cut(s)	395, 1190, 1440
MvnI	CGCG	2 cut(s)	289, 863
MwoI	GCNNNNNNNGC	3 cut(s)	372, 381, 965
NaeI	GCCGGC	1 cut(s)	230
NarI	GGCGCC	1 cut(s)	199
NciI	CCSGG	4 cut(s)	172, 340, 1175, 1176
NcoI	CCATGG	1 cut(s)	129
NdeI	CATATG	1 cut(s)	937
NdeII	GATC	9 cut(s)	212, 259, 297, 409, 541, 667, 1024, 1213, 1498
NgoMIV	GCCGGC	1 cut(s)	228
NlaIII	CATG	9 cut(s)	133, 247, 796, 860, 911, 988, 1108, 1477, 1773
NlaIV	GGNNCC	4 cut(s)	200, 399, 1173, 1215
NmeAIII	GCCGAG	2 cut(s)	175, 1327
NmuCI	GTSAC	2 cut(s)	349, 617
NsiI	ATGCAT	2 cut(s)	858, 943
NspI	RCATGY	2 cut(s)	860, 1477
PaeR7I	CTCGAG	1 cut(s)	1004
PagI	TCATGA	1 cut(s)	984
PciI	ACATGT	1 cut(s)	1473
PciSI	GCTCTTC	1 cut(s)	373
PcsI	WCGNNNNNNNCGW	1 cut(s)	1605
PctI	GAATGC	3 cut(s)	1162, 1276, 1401
PdiI	GCCGGC	1 cut(s)	230
PfeI	GAWTC	4 cut(s)	713, 883, 1334, 1795
PflFI	GACNNNGTC	1 cut(s)	794
PfoI	TCCNGGA	1 cut(s)	170
PkrI	GCNGC	5 cut(s)	98, 291, 386, 958, 1779
PleI	GAGTC	2 cut(s)	226, 1595
PluTI	GGCGCC	1 cut(s)	202
PpsI	GAGTC	2 cut(s)	226, 1595
PpuMI	RGGWCCY	2 cut(s)	397, 1171
PscI	ACATGT	1 cut(s)	1473
PsiI	TTATAA	1 cut(s)	1035
Psp5II	RGGWCCY	2 cut(s)	397, 1171
Psp6I	CCWGG	3 cut(s)	393, 1188, 1438
PspEI	GGTNACC	1 cut(s)	617
PspFI	CCCAGC	2 cut(s)	92, 124
PspGI	CCWGG	3 cut(s)	393, 1188, 1438
PspN4I	GGNNCC	4 cut(s)	200, 399, 1173, 1215
PspPI	GGNCC	8 cut(s)	174, 231, 397, 658, 1019, 1171, 1567, 1617
PspPPI	RGGWCCY	2 cut(s)	397, 1171
PspXI	VCTCGAGB	1 cut(s)	1004
PsrI	GAACNNNNNNTAC	2 cut(s)	1475, 1507
PstI	CTGCAG	1 cut(s)	1633
PstNI	CAGNNNCTG	1 cut(s)	1129
PsuI	RGATCY	2 cut(s)	541, 1213
PsyI	GACNNNGTC	1 cut(s)	794
RsaI	GTAC	5 cut(s)	278, 360, 819, 931, 1908
RsaNI	GTAC	5 cut(s)	277, 359, 818, 930, 1907
SapI	GCTCTTC	1 cut(s)	373
SaqAI	TTAA	4 cut(s)	972, 996, 1329, 1554
SatI	GCNGC	5 cut(s)	97, 290, 385, 957, 1778
Sau3AI	GATC	9 cut(s)	212, 259, 297, 409, 541, 667, 1024, 1213, 1498
Sau96I	GGNCC	8 cut(s)	174, 231, 397, 658, 1019, 1171, 1567, 1617
SbfI	CCTGCAGG	1 cut(s)	1633
SchI	GAGTC	2 cut(s)	227, 1595
ScrFI	CCNGG	7 cut(s)	172, 340, 395, 1175, 1176, 1190, 1440
SdaI	CCTGCAGG	1 cut(s)	1633
SduI	GDGCHC	2 cut(s)	347, 1423
SfaNI	GCATC	2 cut(s)	843, 967
SfcI	CTRYAG	2 cut(s)	1386, 1629
SfoI	GGCGCC	1 cut(s)	200
Sfr274I	CTCGAG	1 cut(s)	1004
SinI	GGWCC	4 cut(s)	174, 397, 1171, 1567
SlaI	CTCGAG	1 cut(s)	1004
SmaI	CCCGGG	1 cut(s)	1176
SmlI	CTYRAG	1 cut(s)	1004
SmoI	CTYRAG	1 cut(s)	1004
SpeI	ACTAGT	1 cut(s)	688
Sse8387I	CCTGCAGG	1 cut(s)	1633
SspDI	GGCGCC	1 cut(s)	198
SspI	AATATT	1 cut(s)	838
SspMI	CTAG	4 cut(s)	689, 1523, 1817, 1829
StyD4I	CCNGG	7 cut(s)	170, 338, 393, 1173, 1174, 1188, 1438
StyI	CCWWGG	1 cut(s)	129
TaaI	ACNGT	8 cut(s)	349, 381, 916, 926, 1271, 1646, 1767, 1876
TaiI	ACGT	3 cut(s)	586, 1265, 1864
TaqI	TCGA	2 cut(s)	422, 1005
TauI	GCSGC	2 cut(s)	292, 387
TfiI	GAWTC	4 cut(s)	713, 883, 1334, 1795
Tru1I	TTAA	4 cut(s)	972, 996, 1329, 1554
Tru9I	TTAA	4 cut(s)	972, 996, 1329, 1554
TscAI	CASTG	5 cut(s)	352, 386, 529, 931, 1597
TseFI	GTSAC	2 cut(s)	349, 617
TseI	GCWGC	3 cut(s)	96, 956, 1777
Tsp45I	GTSAC	2 cut(s)	349, 617
TspDTI	ATGAA	2 cut(s)	1001, 1386
TspGWI	ACGGA	2 cut(s)	1004, 1221
TspMI	CCCGGG	1 cut(s)	1174
TspRI	CASTG	5 cut(s)	352, 386, 529, 931, 1597
Tth111I	GACNNNGTC	1 cut(s)	794
VpaK11BI	GGWCC	4 cut(s)	174, 397, 1171, 1567
XapI	RAATTY	6 cut(s)	404, 604, 1378, 1529, 1580, 1812
XceI	RCATGY	2 cut(s)	860, 1477
XcmI	CCANNNNNNNNNTGG	1 cut(s)	638
XhoI	CTCGAG	1 cut(s)	1004
XmaI	CCCGGG	1 cut(s)	1174
XspI	CTAG	4 cut(s)	689, 1523, 1817, 1829
Zsp2I	ATGCAT	2 cut(s)	858, 943

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.