Rh2AG191500

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
18983326 .. 18988187
4862 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG191500.1

Sequence Viewer

Length: 1584 bp
ATGGCCGAGGAGGCATCACCGACTCGCCTCACCTTCATCCTCATTGTTCTCGTGATCTTCATTATCGATTCCGTCCATGTCTTTGCCAATCCGAGCACCCCTGCTCTCCTTCTCCATTCACTTCCAGTCCCGGCCATGGTGTTACCTCTCTACCACTCCACTCCCAATTCCTCTTCTTCGACGTTTAATTCGCGTCGCCACCTTCATGGATCCGAGTCCCCTCGCCGCCCCAACGCCAGGATGAGCCTCTACGACGATCTCCTCCGCAACGGGTACTATACGACCCGGCTTTGGATCGGAACGCCGCCGCAGATGTTTGCTCTGATTGTTGATACCGGCAGCACTGTCACCTATGTGCCTTGCTCCTCTTGTGAACACTGTGGCAGACACCAGGACCCTAAGTTTGATCCCGAATCGTCGAACACGTACCAAGCTGTGAAATGCAACATAGATTGTTCCTGTGACAGTGACAGGGTGAACTGTATATACGAGAGGCAGTATGCCGAAATGAGCAGTAGTAGTGGTGTGCTGGGCGAGGATCTTATATCATTTGGGAACCAGAGTGATCTCAAGCCTCACAGAGCGGTTTTCGGGTGTGAGAATGTGGAGACCGGTGACCTGTTCAGCCAGGCTGCCGATGGGATAATGGGATTGGGACGTGGTGATCTAAGTGTGGTGGATCAGCTTGTTGGGAAAGGTGTTATAAGTGATTCGTTCTCCTTGTGTTATGGTGGGATGGACATTGGCGGGGGTGCAATGGTTCTTGGTGGCATCGCAGCTCCCGAAGGCATGGTCTTTACACAATCAAACGCCGGACGAAGTCCATACTACAATATTGATTTGAAGGAGATACATGTAGCTGGGAAGCAATTGGCTCTGAATCCAAGCGTCTTTGATGGAAAACATGGAACAGTCCTGGACAGTGGCACAACATACGCTTACCTTCCAGAAGCAGCATTTCTAGCATTTAAAGAGGCTATCATGAAGGAAGTTAATTCACTCCAACAGATCCGTGGCCCTGATCCCAACTATAATGATATCTGTTTTTCCACTGATGTAAGTGATGTGTCCCAACTTTCAAGCACCTTTCCACAAGTTGATATGATATTTGGCAATGGGAAAAAGTTTGGCCTATCTCCTGAAAATTACTTATTCCGACATTCAAAGGTGCATGGTGCTTATTGTCTTGGGATTTTCCAAAATGGAAAGGATCCAACTACACTTTTGGGAGGAATCCTTGTCCGCAATACTCTTGTAACATACGACCGTGAGCATTCCAAGATTGGTTTTTGGAAAACTAATTGTTCTGAGTTGTGGGAAAGACTTCATGTATCTCCTTCACCTCTACCAATGCCTCCTACTTCTGAGGAAAAGAATCCAACTGCCAAAACACAGCCTACAGTAGCTCCATCTGGATCGCCATATGTACTTTCAGGAGACCTCCAAATTGGACACATAACATTTGATATGTCTTTGAACATCAGCTACTCAGATCTGAAGCCCCACATTACAGAACTTGGTGAATTCATAGCTCAGGAATTAGACATTAACACTTCACAGGTCAAGCAAAACCATGAATTTTGA

Protein Analysis

527

Amino Acids

57.65

Weight (kDa)

5.35

Isoelectric Point (pI)

50.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 93 - 257 3.1e-35 Xylanase inhibitor N-terminal
Asp PF00026 93 - 430 3.2e-34 Eukaryotic aspartyl protease
TAXi_C PF14541 277 - 430 1.2e-28 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 704
AccBSI CCGCTC 1 cut(s) 584
AccII CGCG 1 cut(s) 193
AciI CCGC 7 cut(s) 226, 265, 305, 308, 584, 747, 1243
AcoI YGGCCR 2 cut(s) 3, 132
AcsI RAATTY 2 cut(s) 1523, 1577
AcuI CTGAAG 1 cut(s) 1517
AfaI GTAC 3 cut(s) 275, 428, 1428
AfiI CCNNNNNNNGG 3 cut(s) 136, 237, 291
AflIII ACRYGT 2 cut(s) 423, 853
AgeI ACCGGT 1 cut(s) 611
AgsI TTSAA 4 cut(s) 844, 1080, 1164, 1477
AjiI CACGTC 1 cut(s) 659
AjnI CCWGG 4 cut(s) 236, 390, 627, 915
AleI CACNNNNGTG 1 cut(s) 353
AluBI AGCT 7 cut(s) 434, 685, 779, 860, 1406, 1485, 1532
AluI AGCT 7 cut(s) 434, 685, 779, 860, 1406, 1485, 1532
Alw21I GWGCWC 1 cut(s) 98
Alw26I GTCTC 2 cut(s) 602, 1431
AoxI GGCC 4 cut(s) 3, 132, 1015, 1129
ApeKI GCWGC 4 cut(s) 339, 632, 776, 953
ApoI RAATTY 2 cut(s) 1523, 1577
ArsI GACNNNNNNTTYG 6 cut(s) 172, 204, 386, 418, 777, 809
AsiGI ACCGGT 1 cut(s) 611
Asp700I GAANNNNTTC 1 cut(s) 1323
AspS9I GGNCC 2 cut(s) 394, 1016
AsuC2I CCSGG 2 cut(s) 131, 286
AsuHPI GGTGA 8 cut(s) 9, 22, 340, 487, 626, 674, 1332, 1532
AvaII GGWCC 1 cut(s) 394
BamHI GGATCC 2 cut(s) 209, 1210
BauI CACGAG 1 cut(s) 50
Bbv12I GWGCWC 1 cut(s) 98
BbvI GCAGC 4 cut(s) 351, 619, 788, 965
BccI CCATC 4 cut(s) 632, 730, 890, 1417
BciT130I CCWGG 4 cut(s) 238, 392, 629, 917
BcnI CCSGG 2 cut(s) 131, 286
BcoDI GTCTC 2 cut(s) 602, 1431
BfaI CTAG 1 cut(s) 962
BfmI CTRYAG 1 cut(s) 1398
BglI GCCNNNNNGGC 1 cut(s) 11
BglII AGATCT 1 cut(s) 1492
BisI GCNGC 7 cut(s) 226, 305, 308, 340, 633, 777, 954
BlsI GCNGC 7 cut(s) 227, 306, 309, 341, 634, 778, 955
Bme1390I CCNGG 6 cut(s) 131, 238, 286, 392, 629, 917
Bme18I GGWCC 1 cut(s) 394
BmgBI CACGTC 1 cut(s) 659
BmgT120I GGNCC 2 cut(s) 394, 1016
BmiI GGNNCC 4 cut(s) 211, 396, 557, 1212
BmrFI CCNGG 6 cut(s) 131, 238, 286, 392, 629, 917
BmsI GCATC 2 cut(s) 23, 780
Bpu10I CCTNAGC 1 cut(s) 1533
BpuEI CTTGAG 1 cut(s) 554
BpuMI CCSGG 2 cut(s) 131, 286
Bsa29I ATCGAT 1 cut(s) 66
BsaAI YACGTR 1 cut(s) 426
BsaI GGTCTC 2 cut(s) 602, 1431
BsaJI CCNNGG 3 cut(s) 6, 135, 1012
BsaWI WCCGGW 1 cut(s) 611
BsaXI ACNNNNNCTCC 2 cut(s) 1390, 1420
Bsc4I CCNNNNNNNGG 3 cut(s) 136, 237, 291
Bse118I RCCGGY 2 cut(s) 335, 611
Bse1I ACTGG 1 cut(s) 125
Bse3DI GCAATG 2 cut(s) 762, 1120
BseBI CCWGG 4 cut(s) 238, 392, 629, 917
BseCI ATCGAT 1 cut(s) 66
BseDI CCNNGG 3 cut(s) 6, 135, 1012
BseGI GGATG 3 cut(s) 36, 246, 741
BseLI CCNNNNNNNGG 3 cut(s) 136, 237, 291
BseMI GCAATG 2 cut(s) 762, 1120
BseMII CTCAG 4 cut(s) 1299, 1356, 1503, 1547
BseNI ACTGG 1 cut(s) 125
BseRI GAGGAG 3 cut(s) 23, 251, 355
BseXI GCAGC 4 cut(s) 351, 619, 788, 965
BseYI CCCAGC 2 cut(s) 529, 860
Bsh1236I CGCG 1 cut(s) 193
Bsh1285I CGRYCG 1 cut(s) 1267
BshFI GGCC 4 cut(s) 5, 134, 1017, 1131
BshTI ACCGGT 1 cut(s) 611
BshVI ATCGAT 1 cut(s) 66
BsiEI CGRYCG 1 cut(s) 1267
BsiHKAI GWGCWC 1 cut(s) 98
BsiSI CCGG 5 cut(s) 131, 286, 336, 612, 813
BslFI GGGAC 4 cut(s) 113, 202, 669, 1054
BslI CCNNNNNNNGG 3 cut(s) 136, 237, 291
BsmAI GTCTC 2 cut(s) 602, 1431
BsmFI GGGAC 4 cut(s) 113, 202, 669, 1054
BsmI GAATGC 1 cut(s) 1273
BsnI GGCC 4 cut(s) 5, 134, 1017, 1131
Bso31I GGTCTC 2 cut(s) 602, 1431
Bsp1286I GDGCHC 1 cut(s) 98
Bsp19I CCATGG 1 cut(s) 135
BspACI CCGC 7 cut(s) 226, 265, 305, 308, 584, 747, 1243
BspANI GGCC 4 cut(s) 5, 134, 1017, 1131
BspCNI CTCAG 4 cut(s) 1300, 1357, 1502, 1546
BspDI ATCGAT 1 cut(s) 66
BspFNI CGCG 1 cut(s) 193
BspHI TCATGA 1 cut(s) 981
BspLI GGNNCC 4 cut(s) 211, 396, 557, 1212
BspTNI GGTCTC 2 cut(s) 602, 1431
BsrBI CCGCTC 1 cut(s) 584
BsrDI GCAATG 2 cut(s) 762, 1120
BsrFI RCCGGY 2 cut(s) 335, 611
BsrI ACTGG 1 cut(s) 125
BssAI RCCGGY 2 cut(s) 335, 611
BssECI CCNNGG 3 cut(s) 6, 135, 1012
BssSI CACGAG 1 cut(s) 50
BssT1I CCWWGG 1 cut(s) 135
Bst2BI CACGAG 1 cut(s) 50
Bst2UI CCWGG 4 cut(s) 238, 392, 629, 917
Bst4CI ACNGT 8 cut(s) 346, 380, 467, 482, 913, 923, 1268, 1402
Bst6I CTCTTC 1 cut(s) 178
BstBAI YACGTR 1 cut(s) 426
BstDEI CTNAG 6 cut(s) 399, 668, 1308, 1365, 1489, 1533
BstDSI CCRYGG 2 cut(s) 135, 1012
BstEII GGTNACC 1 cut(s) 614
BstF5I GGATG 3 cut(s) 36, 246, 741
BstFNI CGCG 1 cut(s) 193
BstMAI GTCTC 2 cut(s) 602, 1431
BstMCI CGRYCG 1 cut(s) 1267
BstMWI GCNNNNNNNGC 2 cut(s) 11, 962
BstNI CCWGG 4 cut(s) 238, 392, 629, 917
BstNSI RCATGY 1 cut(s) 857
BstPI GGTNACC 1 cut(s) 614
BstSCI CCNGG 6 cut(s) 129, 236, 284, 390, 627, 915
BstSFI CTRYAG 1 cut(s) 1398
BstUI CGCG 1 cut(s) 193
BstV1I GCAGC 4 cut(s) 351, 619, 788, 965
BstX2I RGATCY 5 cut(s) 209, 538, 1008, 1210, 1492
BstXI CCANNNNNNTGG 1 cut(s) 206
BstYI RGATCY 5 cut(s) 209, 538, 1008, 1210, 1492
Bsu15I ATCGAT 1 cut(s) 66
BsuRI GGCC 4 cut(s) 5, 134, 1017, 1131
BsuTUI ATCGAT 1 cut(s) 66
BtgI CCRYGG 2 cut(s) 135, 1012
BtgZI GCGATG 1 cut(s) 757
BtrI CACGTC 1 cut(s) 659
BtsCI GGATG 3 cut(s) 36, 246, 741
BtsIMutI CAGTG 5 cut(s) 342, 376, 472, 928, 1050
CciI TCATGA 1 cut(s) 981
Cfr10I RCCGGY 2 cut(s) 335, 611
Cfr13I GGNCC 2 cut(s) 394, 1016
ClaI ATCGAT 1 cut(s) 66
CseI GACGC 2 cut(s) 182, 877
Csp6I GTAC 3 cut(s) 274, 427, 1427
CspAI ACCGGT 1 cut(s) 611
CviQI GTAC 3 cut(s) 274, 427, 1427
DdeI CTNAG 6 cut(s) 399, 668, 1308, 1365, 1489, 1533
DraI TTTAAA 1 cut(s) 970
EaeI YGGCCR 2 cut(s) 3, 132
Eam1104I CTCTTC 1 cut(s) 178
EarI CTCTTC 1 cut(s) 178
Eco130I CCWWGG 1 cut(s) 135
Eco31I GGTCTC 2 cut(s) 602, 1431
Eco32I GATATC 1 cut(s) 1039
Eco47I GGWCC 1 cut(s) 394
Eco57I CTGAAG 1 cut(s) 1517
Eco91I GGTNACC 1 cut(s) 614
EcoO109I RGGNCCY 1 cut(s) 394
EcoO65I GGTNACC 1 cut(s) 614
EcoRI GAATTC 1 cut(s) 1523
EcoRII CCWGG 4 cut(s) 236, 390, 627, 915
EcoRV GATATC 1 cut(s) 1039
EcoT14I CCWWGG 1 cut(s) 135
ErhI CCWWGG 1 cut(s) 135
FaqI GGGAC 4 cut(s) 113, 202, 669, 1054
FauI CCCGC 1 cut(s) 740
FauNDI CATATG 1 cut(s) 1423
Fnu4HI GCNGC 7 cut(s) 226, 305, 308, 340, 633, 777, 954
FokI GGATG 3 cut(s) 23, 253, 748
Fsp4HI GCNGC 7 cut(s) 226, 305, 308, 340, 633, 777, 954
FspBI CTAG 1 cut(s) 962
GluI GCNGC 7 cut(s) 226, 305, 308, 340, 633, 777, 954
GsaI CCCAGC 2 cut(s) 533, 864
HaeIII GGCC 4 cut(s) 5, 134, 1017, 1131
HapII CCGG 5 cut(s) 131, 286, 336, 612, 813
HgaI GACGC 2 cut(s) 182, 877
HinfI GANTC 8 cut(s) 22, 68, 215, 413, 710, 880, 1233, 1375
HpaII CCGG 5 cut(s) 131, 286, 336, 612, 813
HphI GGTGA 8 cut(s) 9, 22, 340, 487, 626, 674, 1332, 1532
Hpy166II GTNNAC 2 cut(s) 374, 478
Hpy188III TCNNGA 9 cut(s) 52, 410, 782, 947, 982, 1139, 1413, 1434, 1535
Hpy8I GTNNAC 2 cut(s) 374, 478
Hpy99I CGWCG 4 cut(s) 184, 198, 257, 421
HpyAV CCTTC 8 cut(s) 43, 119, 212, 779, 838, 953, 979, 1347
HpyCH4III ACNGT 8 cut(s) 346, 380, 467, 482, 913, 923, 1268, 1402
HpyCH4IV ACGT 3 cut(s) 182, 425, 658
HpyCH4V TGCA 3 cut(s) 444, 755, 1171
HpyF10VI GCNNNNNNNGC 2 cut(s) 11, 962
HpyF3I CTNAG 6 cut(s) 399, 668, 1308, 1365, 1489, 1533
HpySE526I ACGT 3 cut(s) 182, 425, 658
LmnI GCTCC 3 cut(s) 368, 784, 1411
Lsp1109I GCAGC 4 cut(s) 351, 619, 788, 965
LweI GCATC 2 cut(s) 23, 780
MaeI CTAG 1 cut(s) 962
MaeII ACGT 3 cut(s) 182, 425, 658
MaeIII GTNAC 6 cut(s) 141, 346, 461, 467, 614, 1255
MbiI CCGCTC 1 cut(s) 584
MboII GAAGA 3 cut(s) 49, 165, 168
MfeI CAATTG 1 cut(s) 869
MflI RGATCY 5 cut(s) 209, 538, 1008, 1210, 1492
MhlI GDGCHC 1 cut(s) 98
MlyI GAGTC 2 cut(s) 16, 224
MmeI TCCRAC 4 cut(s) 1027, 1180, 1238, 1403
MroXI GAANNNNTTC 1 cut(s) 1323
MseI TTAA 4 cut(s) 186, 969, 993, 1548
MslI CAYNNNNRTG 2 cut(s) 204, 353
MspI CCGG 5 cut(s) 131, 286, 336, 612, 813
MspR9I CCNGG 6 cut(s) 131, 238, 286, 392, 629, 917
MunI CAATTG 1 cut(s) 869
Mva1269I GAATGC 1 cut(s) 1273
MvaI CCWGG 4 cut(s) 238, 392, 629, 917
MvnI CGCG 1 cut(s) 193
MwoI GCNNNNNNNGC 2 cut(s) 11, 962
NciI CCSGG 2 cut(s) 131, 286
NcoI CCATGG 1 cut(s) 135
NdeI CATATG 1 cut(s) 1423
NlaIV GGNNCC 4 cut(s) 211, 396, 557, 1212
NmeAIII GCCGAG 1 cut(s) 31
NmuCI GTSAC 4 cut(s) 346, 461, 467, 614
NspI RCATGY 1 cut(s) 857
OliI CACNNNNGTG 1 cut(s) 353
PagI TCATGA 1 cut(s) 981
PciI ACATGT 1 cut(s) 853
PcsI WCGNNNNNNNCGW 2 cut(s) 422, 780
PctI GAATGC 1 cut(s) 1273
PdmI GAANNNNTTC 1 cut(s) 1323
PfeI GAWTC 6 cut(s) 68, 413, 710, 880, 1233, 1375
PflFI GACNNNGTC 1 cut(s) 819
PfoI TCCNGGA 1 cut(s) 915
PinAI ACCGGT 1 cut(s) 611
PkrI GCNGC 7 cut(s) 227, 306, 309, 341, 634, 778, 955
PleI GAGTC 2 cut(s) 16, 223
PpsI GAGTC 2 cut(s) 16, 223
Ppu21I YACGTR 1 cut(s) 426
PpuMI RGGWCCY 1 cut(s) 394
PscI ACATGT 1 cut(s) 853
PsiI TTATAA 1 cut(s) 704
Psp5II RGGWCCY 1 cut(s) 394
Psp6I CCWGG 4 cut(s) 236, 390, 627, 915
PspEI GGTNACC 1 cut(s) 614
PspFI CCCAGC 2 cut(s) 529, 860
PspGI CCWGG 4 cut(s) 236, 390, 627, 915
PspN4I GGNNCC 4 cut(s) 211, 396, 557, 1212
PspPI GGNCC 2 cut(s) 394, 1016
PspPPI RGGWCCY 1 cut(s) 394
PsrI GAACNNNNNNTAC 4 cut(s) 470, 502, 1469, 1501
PsuI RGATCY 5 cut(s) 209, 538, 1008, 1210, 1492
PsyI GACNNNGTC 1 cut(s) 819
RsaI GTAC 3 cut(s) 275, 428, 1428
RsaNI GTAC 3 cut(s) 274, 427, 1427
RseI CAYNNNNRTG 2 cut(s) 204, 353
SaqAI TTAA 4 cut(s) 186, 969, 993, 1548
SatI GCNGC 7 cut(s) 226, 305, 308, 340, 633, 777, 954
Sau96I GGNCC 2 cut(s) 394, 1016
SchI GAGTC 2 cut(s) 16, 224
ScrFI CCNGG 6 cut(s) 131, 238, 286, 392, 629, 917
SduI GDGCHC 1 cut(s) 98
SfaNI GCATC 2 cut(s) 23, 780
SfcI CTRYAG 1 cut(s) 1398
SinI GGWCC 1 cut(s) 394
SmiMI CAYNNNNRTG 2 cut(s) 204, 353
SmlI CTYRAG 1 cut(s) 569
SmoI CTYRAG 1 cut(s) 569
SsiI CCGC 7 cut(s) 226, 265, 305, 308, 584, 747, 1243
SspI AATATT 1 cut(s) 835
SspMI CTAG 1 cut(s) 962
StyD4I CCNGG 6 cut(s) 129, 236, 284, 390, 627, 915
StyI CCWWGG 1 cut(s) 135
TaaI ACNGT 8 cut(s) 346, 380, 467, 482, 913, 923, 1268, 1402
TaiI ACGT 3 cut(s) 185, 428, 661
TaqI TCGA 3 cut(s) 66, 179, 419
TatI WGTACW 1 cut(s) 1426
TauI GCSGC 3 cut(s) 228, 307, 310
TfiI GAWTC 6 cut(s) 68, 413, 710, 880, 1233, 1375
Tru1I TTAA 4 cut(s) 186, 969, 993, 1548
Tru9I TTAA 4 cut(s) 186, 969, 993, 1548
TscAI CASTG 5 cut(s) 349, 383, 472, 928, 1057
TseFI GTSAC 4 cut(s) 346, 461, 467, 614
TseI GCWGC 4 cut(s) 339, 632, 776, 953
Tsp45I GTSAC 4 cut(s) 346, 461, 467, 614
TspDTI ATGAA 6 cut(s) 25, 49, 194, 998, 1316, 1516
TspGWI ACGGA 2 cut(s) 61, 1001
TspRI CASTG 5 cut(s) 349, 383, 472, 928, 1057
Tth111I GACNNNGTC 1 cut(s) 819
VpaK11BI GGWCC 1 cut(s) 394
XapI RAATTY 2 cut(s) 1523, 1577
XceI RCATGY 1 cut(s) 857
XcmI CCANNNNNNNNNTGG 2 cut(s) 635, 1010
XmnI GAANNNNTTC 1 cut(s) 1323
XspI CTAG 1 cut(s) 962
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.