MD15G1390100.v1.1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0012995
Physical Location & Seq
Forward (+)
48445521 .. 48447362
1842 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1390100.v1.1.491

Sequence Viewer

Length: 1842 bp
ATGGATTTGATGGTACCTGTGAACCAAACCCCTAATGGGTTTTGCTCATTTCACAGAGTTGATAGGGTGAGGACAGGAAAGACTGGTAATTTTGGAGCTAGGGTCTGTGGTAAGGTTGGTCTCACCACTCCCGATTATCGGAGGCTCTTTGTGGGCAGCAGAGCTCGGTTTCTTGTTCTCTCCGATGGCATTCAGTGTGGGATACAGGACGGTTACCAGAAACATAGGCGAAAGCGTGTACTTGCTGTGTCAAAAGTCGAAACTTTTAGTTCCAATGGTAGGCTGCAGAATGTTGAGTATACCCCACATGGGGGTTTGAATGGAATGGACTCTTCCAATGGTTTTGAGGAATTCGAGAGTAATAATCAGCTTCGTAGGCTGGTTAGAAATGGGGAATTAGAAGAGGGGTTTAAGTTTCTAGAGAACATGCTTTATCATGGTGATATGCCGGATATTATTGCGTGTACGAGTTTAATCAGGGGGTTTTGTAAGAGTGGAAAGACAAGGAAGGCGACGCGGATTATGAACATTCTAGAAGAATCTGGGGCTATCCTTGATGTTATAACTTACAATGTCTTGATCAGTGGATACTGCAAGGCTGGTGAGATTGATAATGCTTTGAGGGTTTTGGACCGAATGAGTGTTTCTCCAGATGTTGTTACGTACAATACAATCTTGCGTACTTTATGTGATAGTGGGAAATTGAAGCAAGCGATGGAAGTTCTTGATCGACAGCTGCAAAGGGAGTGTTATCCAGATGTGATTACGTATACCATACTGATTGAAGCAACTTGCAAGGAAAGTGGGGTTGAGCAGGCGATGAAGCTTTTGGATGAGATGAGGAGCAAAGGATGCAAGCCTGATGTGGTCACTTATAATGTTCTTATCAACGGGATATGCAAGGAAGGAAGGTTGGATGAAGCAATCAAATTCTTGAACGACATGCCGTCATCTGATTGCCAACCAAATGTCATTACCCACAATATTGTTTTGCGTAGCATGTGCAGCACTGGCAGGTGGATGGATGCTGAAAAACTACTAGCTGAAATGGTTCACAGAGGCTGTTCTCCTAGTGTTGTTACTTTCAATATTTTGATTAACTTCTTGTGCCGGAAGGGCTTGTTGGGTAGAGCAATTGACATTTTGGAGAAGATGCCTAAGCATGGCTGTACTCCAAATTCCTTGAGTTACAACCCATTGCTTCACGGATTTTGCAAGGAAAAGAAGATGGATAGGGCGATTGAGTATTTGGATATAATGGTTTCTCGGGGCTGTTATCCAGACATTGTGACTTACAATACTTTGCTTACAGCTTTGTGCAAAGATGGAAAGGTTGATAGCGCAGTTGAGATACTTAATCAACTAAGTAGCAAGGGTTGCTCTCCTGTTCTAATCACATACAATACAGTGATTGATGGGCTCTCAAAGGTGGGGAAAACAGAATGTGCCTTAGAACTTTTGCATGAGATGCGCAAAAAGGGTTTAAAGCCTGATGTAATTACTTATTCTTCTGTCGTGGGAGGGCTTAGCAGAGAAGGAAAGGTTGATGAAGCAATTAAGTTTGTCCATGATTTGGAAGATTCGGGCGTCAAGCCCAATGCTATCACTTTTAACTCCATCATGTTGGGTCTTTGCAAGGCTAAGCAAGCTGGTCGTGCAATTGATTTCCTCGCTTATATGGTATCTAAAGGATGTCAACCTACTGAAGCAACATACACCATTCTCATTGAAGGCATAGCTTATGAAGGGTTAGCAAAAGAGGCTTTGGAGTTATTGAATGAACTCTGCTATAGAGGGGTTGTGAAGAAAAGCTCTGCTGAACAGGTGGCAGTCAAGATGTAG

Protein Analysis

614

Amino Acids

68.05

Weight (kDa)

8.38

Isoelectric Point (pI)

35.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_long PF17177 132 - 245 5.8e-06 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 150 - 199 1.3e-12 PPR repeat family
TPR_24 PF23276 163 - 278 1.3e-10 Fungal tetratrico peptide repeats
PPR_1 PF12854 185 - 214 1.7e-12 PPR repeat
PPR_2 PF13041 186 - 214 1.7e-07 PPR repeat family
PPR PF01535 188 - 213 7.9e-08 PPR repeat
PPR_1 PF12854 214 - 243 1.7e-09 PPR repeat
PPR_3 PF13812 215 - 264 2.6e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 217 - 266 8.4e-15 PPR repeat family
TPR_24 PF23276 224 - 346 8.9e-09 Fungal tetratrico peptide repeats
PPR_1 PF12854 249 - 281 4.7e-10 PPR repeat
PPR_3 PF13812 252 - 299 5.1e-11 Pentatricopeptide repeat domain
PPR_2 PF13041 252 - 301 9.2e-20 PPR repeat family
PPR_1 PF12854 283 - 315 1.3e-16 PPR repeat
PPR_2 PF13041 287 - 335 7e-19 PPR repeat family
PPR PF01535 290 - 320 6.3e-08 PPR repeat
PPR_3 PF13812 312 - 368 4.6e-09 Pentatricopeptide repeat domain
PPR_1 PF12854 319 - 351 5.2e-08 PPR repeat
PPR_2 PF13041 327 - 371 6.4e-13 PPR repeat family
PPR_long PF17177 345 - 458 3e-09 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 345 - 403 5e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 353 - 385 9.1e-12 PPR repeat
PPR_2 PF13041 357 - 406 1.2e-15 PPR repeat family
PPR PF01535 360 - 390 3.1e-06 PPR repeat
TPR_24 PF23276 370 - 486 2e-11 Fungal tetratrico peptide repeats
PPR_1 PF12854 389 - 421 3.6e-08 PPR repeat
PPR_2 PF13041 392 - 441 1.6e-16 PPR repeat family
PPR_3 PF13812 418 - 471 3.9e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 423 - 454 2.3e-12 PPR repeat
PPR_2 PF13041 427 - 462 2.1e-10 PPR repeat family
PPR PF01535 430 - 460 4.4e-07 PPR repeat
TPR_24 PF23276 447 - 555 4.6e-07 Fungal tetratrico peptide repeats
PPR_1 PF12854 458 - 491 1.6e-09 PPR repeat
PPR_2 PF13041 464 - 510 4.9e-15 PPR repeat family
PPR PF01535 465 - 495 3.3e-08 PPR repeat
PPR_long PF17177 481 - 604 1.7e-11 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 493 - 524 3.3e-09 PPR repeat
PPR_2 PF13041 505 - 546 2.7e-09 PPR repeat family
PPR_3 PF13812 522 - 577 3.9e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 532 - 579 1.1e-13 PPR repeat family
PPR_1 PF12854 563 - 594 8.9e-06 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0012995)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G09900
fragaria_vesca FvH4_5g34030
malus_domestica MD08G1206600.v1.1 MD15G1390100.v1.1
prunus_persica Prupe.1G539000_v2.0.a1 Prupe.1G539000_v2.0.a1
pyrus_communis pycom08g17840 pycom15g34930
rosa_chinensis RchiOBHm_Chr7g0233521
rosa_laevigata RLG00000001253
rosa_multiflora Rmu_sc0000029.1_g000012
rosa_roxburghii Rroxscaffold_3G00227230
rosa_rugosa Rorug07G0281100.1
rosa_samantha Rh7AG437500 Rh7BG410000 Rh7CG457100 Rh7DG426500
rosa_wichuraiana Rw7G036080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 563, 876
AarI CACCTGC 1 cut(s) 1005
Acc16I TGCGCA 1 cut(s) 1472
Acc36I ACCTGC 1 cut(s) 1005
Acc65I GGTACC 1 cut(s) 13
AccB1I GGYRCC 1 cut(s) 13
AccB7I CCANNNNNTGG 1 cut(s) 1573
AccI GTMKAC 2 cut(s) 299, 770
AccII CGCG 1 cut(s) 517
AciI CCGC 1 cut(s) 517
AcsI RAATTY 3 cut(s) 350, 929, 1177
AcuI CTGAAG 1 cut(s) 1725
AcyI GRCGYC 1 cut(s) 1587
AfaI GTAC 6 cut(s) 15, 240, 466, 665, 682, 1171
AfiI CCNNNNNNNGG 8 cut(s) 36, 138, 279, 309, 310, 311, 1163, 1573
AgsI TTSAA 7 cut(s) 319, 706, 785, 937, 1087, 1730, 1777
AhdI GACNNNNNGTC 1 cut(s) 946
AjuI GAANNNNNNNTTGG 2 cut(s) 1106, 1138
Alw21I GWGCWC 1 cut(s) 166
Alw26I GTCTC 1 cut(s) 125
AlwNI CAGNNNCTG 1 cut(s) 1062
Ama87I CYCGRG 1 cut(s) 1266
ApeKI GCWGC 4 cut(s) 156, 283, 736, 1005
ApoI RAATTY 3 cut(s) 350, 929, 1177
Asp700I GAANNNNTTC 1 cut(s) 1050
Asp718I GGTACC 1 cut(s) 13
AspLEI GCGC 2 cut(s) 1343, 1473
AspS9I GGNCC 1 cut(s) 631
AsuHPI GGTGA 4 cut(s) 79, 115, 452, 614
AvaI CYCGRG 1 cut(s) 1266
AvaII GGWCC 1 cut(s) 631
BanI GGYRCC 1 cut(s) 13
BanII GRGCYC 2 cut(s) 166, 1422
Bbv12I GWGCWC 1 cut(s) 166
BbvI GCAGC 4 cut(s) 168, 270, 723, 1017
BccI CCATC 8 cut(s) 4, 179, 709, 1015, 1222, 1319, 1409, 1625
BceAI ACGGC 1 cut(s) 931
BcgI CGANNNNNNTGC 2 cut(s) 1634, 1668
BciVI GTATCC 2 cut(s) 195, 581
BclI TGATCA 1 cut(s) 579
BcoDI GTCTC 1 cut(s) 125
BfaI CTAG 5 cut(s) 99, 419, 533, 1040, 1071
BfmI CTRYAG 2 cut(s) 284, 1789
BfuAI ACCTGC 1 cut(s) 1005
BfuI GTATCC 2 cut(s) 195, 581
BglI GCCNNNNNGGC 1 cut(s) 1116
BisI GCNGC 4 cut(s) 157, 284, 737, 1006
BlpI GCTNAGC 2 cut(s) 1526, 1641
BlsI GCNGC 4 cut(s) 158, 285, 738, 1007
Bme18I GGWCC 1 cut(s) 631
BmeRI GACNNNNNGTC 1 cut(s) 946
BmeT110I CYCGRG 1 cut(s) 1266
BmgT120I GGNCC 1 cut(s) 631
BmiI GGNNCC 1 cut(s) 15
BmsI GCATC 4 cut(s) 842, 1015, 1143, 1458
BplI GAGNNNNNCTC 2 cut(s) 631, 663
BpmI CTGGAG 1 cut(s) 633
Bpu10I CCTNAGC 1 cut(s) 1158
Bpu1102I GCTNAGC 2 cut(s) 1526, 1641
BpuEI CTTGAG 1 cut(s) 1204
BsaAI YACGTR 2 cut(s) 663, 768
BsaHI GRCGYC 1 cut(s) 1587
BsaI GGTCTC 1 cut(s) 125
BsaXI ACNNNNNCTCC 2 cut(s) 87, 117
Bsc4I CCNNNNNNNGG 8 cut(s) 36, 138, 279, 309, 310, 311, 1163, 1573
Bse1I ACTGG 2 cut(s) 88, 1015
Bse3DI GCAATG 1 cut(s) 1196
BseGI GGATG 6 cut(s) 838, 857, 922, 1026, 1030, 1697
BseLI CCNNNNNNNGG 8 cut(s) 36, 138, 279, 309, 310, 311, 1163, 1573
BseMI GCAATG 1 cut(s) 1196
BseNI ACTGG 2 cut(s) 88, 1015
BseRI GAGGAG 1 cut(s) 856
BseXI GCAGC 4 cut(s) 168, 270, 723, 1017
BsgI GTGCAG 1 cut(s) 1024
Bsh1236I CGCG 1 cut(s) 517
BshNI GGYRCC 1 cut(s) 13
BsiHKAI GWGCWC 1 cut(s) 166
BsiHKCI CYCGRG 1 cut(s) 1266
BsiSI CCGG 2 cut(s) 449, 1111
BslI CCNNNNNNNGG 8 cut(s) 36, 138, 279, 309, 310, 311, 1163, 1573
BsmAI GTCTC 1 cut(s) 125
BsmI GAATGC 1 cut(s) 189
Bso31I GGTCTC 1 cut(s) 125
BsoBI CYCGRG 1 cut(s) 1266
Bsp1286I GDGCHC 2 cut(s) 166, 1422
Bsp143I GATC 2 cut(s) 579, 727
Bsp1720I GCTNAGC 2 cut(s) 1526, 1641
BspACI CCGC 1 cut(s) 517
BspFNI CGCG 1 cut(s) 517
BspLI GGNNCC 1 cut(s) 15
BspMAI CTGCAG 1 cut(s) 288
BspMI ACCTGC 1 cut(s) 1005
BspT107I GGYRCC 1 cut(s) 13
BspTNI GGTCTC 1 cut(s) 125
BsrDI GCAATG 1 cut(s) 1196
BsrI ACTGG 2 cut(s) 88, 1015
BssMI GATC 2 cut(s) 579, 727
BssNAI GTATAC 2 cut(s) 300, 771
BssNI GRCGYC 1 cut(s) 1587
Bst1107I GTATAC 2 cut(s) 300, 771
Bst4CI ACNGT 2 cut(s) 212, 1408
Bst6I CTCTTC 2 cut(s) 337, 396
BstACI GRCGYC 1 cut(s) 1587
BstAPI GCANNNNNTGC 3 cut(s) 852, 1377, 1468
BstBAI YACGTR 2 cut(s) 663, 768
BstC8I GCNNGC 4 cut(s) 711, 816, 857, 1647
BstDEI CTNAG 5 cut(s) 1158, 1364, 1450, 1526, 1641
BstEII GGTNACC 1 cut(s) 212
BstF5I GGATG 6 cut(s) 838, 857, 922, 1026, 1030, 1697
BstFNI CGCG 1 cut(s) 517
BstHHI GCGC 2 cut(s) 1343, 1473
BstKTI GATC 2 cut(s) 582, 730
BstMAI GTCTC 1 cut(s) 125
BstMBI GATC 2 cut(s) 579, 727
BstNSI RCATGY 3 cut(s) 430, 946, 1003
BstPI GGTNACC 1 cut(s) 212
BstSFI CTRYAG 2 cut(s) 284, 1789
BstSNI TACGTA 2 cut(s) 663, 768
BstUI CGCG 1 cut(s) 517
BstV1I GCAGC 4 cut(s) 168, 270, 723, 1017
BstXI CCANNNNNNTGG 1 cut(s) 1624
BstZ17I GTATAC 2 cut(s) 300, 771
BsuI GTATCC 2 cut(s) 195, 581
BtgZI GCGATG 2 cut(s) 728, 833
BtsCI GGATG 6 cut(s) 838, 857, 922, 1026, 1030, 1697
BtsIMutI CAGTG 4 cut(s) 200, 589, 1008, 1413
BveI ACCTGC 1 cut(s) 1005
Cac8I GCNNGC 4 cut(s) 711, 816, 857, 1647
CaiI CAGNNNCTG 1 cut(s) 1062
CfoI GCGC 2 cut(s) 1343, 1473
Cfr13I GGNCC 1 cut(s) 631
CseI GACGC 2 cut(s) 523, 1576
Csp6I GTAC 6 cut(s) 14, 239, 465, 664, 681, 1170
CspCI CAANNNNNGTGG 2 cut(s) 784, 819
CviAII CATG 9 cut(s) 308, 427, 437, 943, 1000, 1163, 1463, 1568, 1621
CviQI GTAC 6 cut(s) 14, 239, 465, 664, 681, 1170
DdeI CTNAG 5 cut(s) 1158, 1364, 1450, 1526, 1641
DpnI GATC 2 cut(s) 581, 729
DpnII GATC 2 cut(s) 579, 727
DraI TTTAAA 1 cut(s) 1485
DriI GACNNNNNGTC 1 cut(s) 946
Eam1104I CTCTTC 2 cut(s) 337, 396
Eam1105I GACNNNNNGTC 1 cut(s) 946
EarI CTCTTC 2 cut(s) 337, 396
Ecl136II GAGCTC 1 cut(s) 164
Eco105I TACGTA 2 cut(s) 663, 768
Eco24I GRGCYC 2 cut(s) 166, 1422
Eco31I GGTCTC 1 cut(s) 125
Eco47I GGWCC 1 cut(s) 631
Eco53kI GAGCTC 1 cut(s) 164
Eco57I CTGAAG 1 cut(s) 1725
Eco88I CYCGRG 1 cut(s) 1266
Eco91I GGTNACC 1 cut(s) 212
EcoICRI GAGCTC 1 cut(s) 164
EcoO65I GGTNACC 1 cut(s) 212
EcoRI GAATTC 1 cut(s) 350
EcoT38I GRGCYC 2 cut(s) 166, 1422
FaeI CATG 9 cut(s) 311, 430, 440, 946, 1003, 1166, 1466, 1571, 1624
FatI CATG 9 cut(s) 307, 426, 436, 942, 999, 1162, 1462, 1567, 1620
FbaI TGATCA 1 cut(s) 579
FblI GTMKAC 2 cut(s) 299, 770
Fnu4HI GCNGC 4 cut(s) 157, 284, 737, 1006
FokI GGATG 6 cut(s) 845, 864, 929, 1033, 1037, 1704
FriOI GRGCYC 2 cut(s) 166, 1422
Fsp4HI GCNGC 4 cut(s) 157, 284, 737, 1006
FspBI CTAG 5 cut(s) 99, 419, 533, 1040, 1071
FspI TGCGCA 1 cut(s) 1472
GlaI GCGC 2 cut(s) 1342, 1472
GluI GCNGC 4 cut(s) 157, 284, 737, 1006
GsuI CTGGAG 1 cut(s) 633
HapII CCGG 2 cut(s) 449, 1111
HgaI GACGC 2 cut(s) 523, 1576
HhaI GCGC 2 cut(s) 1343, 1473
Hin1I GRCGYC 1 cut(s) 1587
Hin1II CATG 9 cut(s) 311, 430, 440, 946, 1003, 1166, 1466, 1571, 1624
Hin6I GCGC 2 cut(s) 1341, 1471
HinP1I GCGC 2 cut(s) 1341, 1471
HincII GTYRAC 1 cut(s) 1697
HindII GTYRAC 1 cut(s) 1697
HindIII AAGCTT 1 cut(s) 824
HinfI GANTC 3 cut(s) 329, 539, 1580
HpaII CCGG 2 cut(s) 449, 1111
HphI GGTGA 4 cut(s) 79, 115, 452, 614
Hpy166II GTNNAC 7 cut(s) 22, 239, 300, 465, 771, 1054, 1697
Hpy188I TCNGA 3 cut(s) 141, 184, 955
Hpy8I GTNNAC 7 cut(s) 22, 239, 300, 465, 771, 1054, 1697
Hpy99I CGWCG 1 cut(s) 517
HpyAV CCTTC 7 cut(s) 502, 899, 903, 1108, 1529, 1724, 1739
HpyCH4III ACNGT 2 cut(s) 212, 1408
HpyCH4IV ACGT 2 cut(s) 662, 767
HpyF3I CTNAG 5 cut(s) 1158, 1364, 1450, 1526, 1641
HpySE526I ACGT 2 cut(s) 662, 767
Hsp92I GRCGYC 1 cut(s) 1587
Hsp92II CATG 9 cut(s) 311, 430, 440, 946, 1003, 1166, 1466, 1571, 1624
HspAI GCGC 2 cut(s) 1341, 1471
KpnI GGTACC 1 cut(s) 17
Ksp22I TGATCA 1 cut(s) 579
Kzo9I GATC 2 cut(s) 579, 727
LmnI GCTCC 2 cut(s) 95, 843
Lsp1109I GCAGC 4 cut(s) 168, 270, 723, 1017
LweI GCATC 4 cut(s) 842, 1015, 1143, 1458
MaeI CTAG 5 cut(s) 99, 419, 533, 1040, 1071
MaeII ACGT 2 cut(s) 662, 767
MaeIII GTNAC 6 cut(s) 212, 658, 868, 1078, 1187, 1288
MalI GATC 2 cut(s) 581, 729
MboI GATC 2 cut(s) 579, 727
MboII GAAGA 8 cut(s) 324, 413, 548, 1162, 1237, 1500, 1589, 1816
MfeI CAATTG 2 cut(s) 1134, 1659
MhlI GDGCHC 2 cut(s) 166, 1422
MlyI GAGTC 1 cut(s) 323
MmeI TCCRAC 1 cut(s) 894
MroXI GAANNNNTTC 1 cut(s) 1050
MseI TTAA 7 cut(s) 411, 473, 1098, 1356, 1484, 1557, 1611
MspA1I CMGCKG 1 cut(s) 736
MspI CCGG 2 cut(s) 449, 1111
MunI CAATTG 2 cut(s) 1134, 1659
Mva1269I GAATGC 1 cut(s) 189
MvnI CGCG 1 cut(s) 517
NdeII GATC 2 cut(s) 579, 727
NlaIII CATG 9 cut(s) 311, 430, 440, 946, 1003, 1166, 1466, 1571, 1624
NlaIV GGNNCC 1 cut(s) 15
NmuCI GTSAC 2 cut(s) 868, 1288
NsbI TGCGCA 1 cut(s) 1472
NspI RCATGY 3 cut(s) 430, 946, 1003
PaqCI CACCTGC 1 cut(s) 1005
PctI GAATGC 1 cut(s) 189
PdmI GAANNNNTTC 1 cut(s) 1050
PfeI GAWTC 2 cut(s) 539, 1580
PflMI CCANNNNNTGG 1 cut(s) 1573
PkrI GCNGC 4 cut(s) 158, 285, 738, 1007
PleI GAGTC 1 cut(s) 323
PpsI GAGTC 1 cut(s) 323
Ppu21I YACGTR 2 cut(s) 663, 768
PsiI TTATAA 2 cut(s) 563, 876
Psp124BI GAGCTC 1 cut(s) 166
PspEI GGTNACC 1 cut(s) 212
PspN4I GGNNCC 1 cut(s) 15
PspPI GGNCC 1 cut(s) 631
PstI CTGCAG 1 cut(s) 288
PstNI CAGNNNCTG 1 cut(s) 1062
PvuII CAGCTG 1 cut(s) 736
RsaI GTAC 6 cut(s) 15, 240, 466, 665, 682, 1171
RsaNI GTAC 6 cut(s) 14, 239, 465, 664, 681, 1170
SacI GAGCTC 1 cut(s) 166
SaqAI TTAA 7 cut(s) 411, 473, 1098, 1356, 1484, 1557, 1611
SatI GCNGC 4 cut(s) 157, 284, 737, 1006
Sau3AI GATC 2 cut(s) 579, 727
Sau96I GGNCC 1 cut(s) 631
SchI GAGTC 1 cut(s) 323
SduI GDGCHC 2 cut(s) 166, 1422
SfaNI GCATC 4 cut(s) 842, 1015, 1143, 1458
SfcI CTRYAG 2 cut(s) 284, 1789
SinI GGWCC 1 cut(s) 631
SmlI CTYRAG 1 cut(s) 1183
SmoI CTYRAG 1 cut(s) 1183
SnaBI TACGTA 2 cut(s) 663, 768
SsiI CCGC 1 cut(s) 517
SspI AATATT 2 cut(s) 985, 1090
SspMI CTAG 5 cut(s) 99, 419, 533, 1040, 1071
SstI GAGCTC 1 cut(s) 166
TaaI ACNGT 2 cut(s) 212, 1408
TaiI ACGT 2 cut(s) 665, 770
TaqI TCGA 3 cut(s) 258, 354, 730
TaqII GACCGA 1 cut(s) 648
TatI WGTACW 2 cut(s) 238, 1169
TfiI GAWTC 2 cut(s) 539, 1580
Tru1I TTAA 7 cut(s) 411, 473, 1098, 1356, 1484, 1557, 1611
Tru9I TTAA 7 cut(s) 411, 473, 1098, 1356, 1484, 1557, 1611
TscAI CASTG 4 cut(s) 200, 589, 1015, 1413
TseFI GTSAC 2 cut(s) 868, 1288
TseI GCWGC 4 cut(s) 156, 283, 736, 1005
Tsp45I GTSAC 2 cut(s) 868, 1288
TspDTI ATGAA 6 cut(s) 539, 836, 933, 1563, 1758, 1794
TspGWI ACGGA 1 cut(s) 1221
TspRI CASTG 4 cut(s) 200, 589, 1015, 1413
Van91I CCANNNNNTGG 1 cut(s) 1573
VpaK11BI GGWCC 1 cut(s) 631
XapI RAATTY 3 cut(s) 350, 929, 1177
XbaI TCTAGA 2 cut(s) 418, 532
XceI RCATGY 3 cut(s) 430, 946, 1003
XcmI CCANNNNNNNNNTGG 1 cut(s) 32
XmiI GTMKAC 2 cut(s) 299, 770
XmnI GAANNNNTTC 1 cut(s) 1050
XspI CTAG 5 cut(s) 99, 419, 533, 1040, 1071
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.