Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0012995

Physical Location & Seq

Genomic Coordinates Forward (+)

12951087 .. 12952904

Gene Structure 1818 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000001253

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1818 bp

ATGGATTTGATAGTGCCCACAAAGCAAACCCCTGATGGGTTTTGCTCATTTCACAAACTTCATGGTGGTTTTGGAGGTAGGATTAGTAATAAGTTGAGTCCCACACCAAGTTCTTCAAGGGTCTTTGTGGGCTGCAAAGGGCGGGTTCTTGTTGTATCTGATAGCATTCGGTGTAGGGCACAGGATGGTTACCAGAAACATAGGCAAAAGCGAATAGTGGCTGTGTCCAAGGTAGAAACGCTTAGTTCTAATGGTAGGTTGCAAAATGTTGAAAAGACCCAAAATGGGAAGTTGAATGGCATGGATTCTTCAAATGGTTTTGAGGAATTTGAGAGTAACAATCAGCTCCGTAGACTGGTGAGAAATGGGGAATTGGAGGAGGGGTTTAGGTTTCTTGAGAGCATGGTTTACCGTGGTGATATTCCGGATATCATTGCTTGTACGAGTTTAATCCGTGGGTTTTGTAAGCTTGGAAAGACAAGGAAGGGGACGCGGATTATGAACATCCTAGAAGAGTCCGGTGCTGTCCCTGATGTCATAACTTACAATGTTTTGATTAGTGGCTATTGCAGGGCGGGGGAGATTGATAATGCCTTGAGGGTGTTGGACAGGATGAGTGTTTCCCCAGATGTTGTTACGTATAATACTATTCTGCGTACGTTATGTGATAGTGGGAAATTGAAGCAAGCAATGGAAGTTCTTGATCGGCAATTGCAAAGGGAGTGTTATCCCGATGTGATTACATATACTATACTGATTGAAGCAACTTGCAAGGAAAGTGGGGTTGAGCAGGCGATGAAGCTTTTGGATGAGATGAAGAGCAAAGGATGTAAGCCTGATGTAGTTACATATAATGTTCTTATCAATGGGATTTGCAAGGAAGGGAGGTTGGATGAAGCAATCAAATTCTTGAATGACATGCCAACCTCTGATTGCCAGCCAAATGTTATTACTCATAATATCATATTGCGTAGCATGTGTAGCACCGGGAGGTGGATGGATGCTGAAAGACTATTAGCTGAAATGGTTGGCAAAGGCTGTTCTCCTAGTGTTGTTACTTTCAATATTTTGATTAACTTCTTGTGCCGAAAGGGTTTGTTGGGTCGAGCAATTGACATTTTGGAGAAGATGCCTAAACATGGTTGTACTCCTAATTCCCTGAGTTATAATCCATTGCTTCATGGATTTTGCAAGGAGAAAAAGATGGACAGGGCAATTGAGTATTTGGATATAATGGTTTCTAGGGGCTGTTACCCGGACATTGTAACCTACAATACTTTGCTCACAGCTTTATGCAAAGATGGAAAGGTTGATGTTGCAGTTGAGATACTTAATCAATTAAGTAGCAAGGGTTGCTCTCCTGTTCTAATTACTTACAATACCGTGATTGATGGGCTATCAAAGGTTGGGAAAACAGAACGTGCCATAGAATTATTGGATGAGATGCGTCAAAAGGGTCTAAAGCCTGATATAATAACTTACTCTTCACTTGTAGGAGGGCTTAGTAGAGAAGGAAAGGTTGATGCAGCAATTAAGTTTGTCCGCGATTTGGAAGGGTTGGGTATCAGGCCAAATGCTATCACTTTCAACTGCATCATGCTCGGGCTTTGCAAGGCAAGGCAAACTTCTCGTGCAATTGATTTCCTGGCTCATATGGTATCGAAAGGATGTAAACCTACTGAAGCAACATACACCATTCTCATTGAAGGCATAGCTTATGAAGGCCTAGCAAAAGAGGCTTTGGAGTTGCTCAATGAACTGTGCTATAGAGGGGTGGTGAAGAGAAGTTCAGCTGAACAGGTGGCAGTCAAGATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016020 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

606

Amino Acids

67.06

Weight (kDa)

8.71

Isoelectric Point (pI)

36.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	116 - 156	1e-05	PPR repeat family
PPR_long	PF17177	124 - 237	1.8e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	132 - 189	7.2e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	142 - 191	3.1e-12	PPR repeat family
TPR_24	PF23276	158 - 270	6.5e-09	Fungal tetratrico peptide repeats
PPR_1	PF12854	174 - 206	3.1e-14	PPR repeat
PPR_2	PF13041	177 - 206	5e-08	PPR repeat family
PPR	PF01535	180 - 205	1.1e-07	PPR repeat
PPR_3	PF13812	202 - 256	6.5e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	206 - 235	1.6e-09	PPR repeat
PPR_2	PF13041	209 - 258	8.3e-15	PPR repeat family
TPR_24	PF23276	216 - 338	1.7e-08	Fungal tetratrico peptide repeats
PPR_1	PF12854	241 - 273	4.4e-10	PPR repeat
PPR_2	PF13041	244 - 293	2.7e-20	PPR repeat family
PPR_3	PF13812	244 - 291	1.7e-11	Pentatricopeptide repeat domain
PPR	PF01535	247 - 277	6.1e-06	PPR repeat
PPR_1	PF12854	275 - 307	1.3e-16	PPR repeat
PPR_2	PF13041	279 - 327	1.1e-18	PPR repeat family
PPR	PF01535	282 - 312	1.3e-07	PPR repeat
PPR_3	PF13812	304 - 360	1.2e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	311 - 343	2.3e-08	PPR repeat
PPR_2	PF13041	320 - 363	6.3e-12	PPR repeat family
PPR_long	PF17177	337 - 450	1.9e-09	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	337 - 395	7.4e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	345 - 377	7e-12	PPR repeat
PPR_2	PF13041	349 - 398	1.2e-15	PPR repeat family
PPR	PF01535	352 - 382	3e-06	PPR repeat
TPR_24	PF23276	360 - 476	8.7e-11	Fungal tetratrico peptide repeats
PPR_1	PF12854	381 - 413	3.5e-08	PPR repeat
PPR_2	PF13041	384 - 433	1.6e-16	PPR repeat family
PPR_3	PF13812	410 - 463	3.1e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	415 - 446	5.9e-12	PPR repeat
PPR_2	PF13041	419 - 466	1.2e-14	PPR repeat family
PPR	PF01535	422 - 452	1.5e-06	PPR repeat
TPR_24	PF23276	432 - 548	4e-08	Fungal tetratrico peptide repeats
PPR_1	PF12854	450 - 483	1.6e-10	PPR repeat
PPR_2	PF13041	456 - 502	9.5e-16	PPR repeat family
PPR_3	PF13812	457 - 499	2.8e-08	Pentatricopeptide repeat domain
PPR	PF01535	457 - 487	1.1e-08	PPR repeat
PPR_long	PF17177	472 - 588	1.2e-11	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	478 - 533	2.3e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	485 - 516	1.5e-08	PPR repeat
PPR_2	PF13041	497 - 538	2.1e-07	PPR repeat family
PPR_3	PF13812	514 - 569	2.8e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	524 - 571	2.3e-14	PPR repeat family
PPR_1	PF12854	555 - 586	4.3e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0012995)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09900
fragaria_vesca	FvH4_5g34030
malus_domestica	MD08G1206600.v1.1 MD15G1390100.v1.1
prunus_persica	Prupe.1G539000_v2.0.a1 Prupe.1G539000_v2.0.a1
pyrus_communis	pycom08g17840 pycom15g34930
rosa_chinensis	RchiOBHm_Chr7g0233521
rosa_laevigata	RLG00000001253
rosa_multiflora	Rmu_sc0000029.1_g000012
rosa_roxburghii	Rroxscaffold_3G00227230
rosa_rugosa	Rorug07G0281100.1
rosa_samantha	Rh7AG437500 Rh7BG410000 Rh7CG457100 Rh7DG426500
rosa_wichuraiana	Rw7G036080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1167
AccI	GTMKAC	1 cut(s)	352
AccII	CGCG	2 cut(s)	493, 1545
AccIII	TCCGGA	1 cut(s)	424
AciI	CCGC	4 cut(s)	142, 493, 575, 1543
AcsI	RAATTY	2 cut(s)	326, 905
AcuI	CTGAAG	1 cut(s)	1701
AfaI	GTAC	3 cut(s)	442, 658, 1147
AfiI	CCNNNNNNNGG	6 cut(s)	36, 285, 355, 993, 1139, 1549
AjnI	CCWGG	1 cut(s)	1644
AluBI	AGCT	7 cut(s)	346, 469, 802, 1019, 1289, 1715, 1793
AluI	AGCT	7 cut(s)	346, 469, 802, 1019, 1289, 1715, 1793
Ama87I	CYCGRG	1 cut(s)	1601
Aor13HI	TCCGGA	1 cut(s)	424
AoxI	GGCC	2 cut(s)	1568, 1723
ApeKI	GCWGC	2 cut(s)	132, 1526
ApoI	RAATTY	2 cut(s)	326, 905
AsuC2I	CCSGG	2 cut(s)	988, 1256
AsuHPI	GGTGA	3 cut(s)	370, 428, 1789
AvaI	CYCGRG	1 cut(s)	1601
BaeGI	GKGCMC	2 cut(s)	18, 181
BauI	CACGAG	1 cut(s)	1629
BbvI	GCAGC	2 cut(s)	119, 1538
BccI	CCATC	6 cut(s)	29, 179, 991, 1198, 1295, 1385
BcgI	CGANNNNNNTGC	4 cut(s)	1582, 1610, 1616, 1644
BciT130I	CCWGG	1 cut(s)	1646
BcnI	CCSGG	2 cut(s)	988, 1256
BfaI	CTAG	4 cut(s)	509, 1047, 1242, 1727
BfmI	CTRYAG	1 cut(s)	1765
BisI	GCNGC	2 cut(s)	133, 1527
BlsI	GCNGC	2 cut(s)	134, 1528
Bme1390I	CCNGG	3 cut(s)	988, 1256, 1646
BmeT110I	CYCGRG	1 cut(s)	1601
BmrFI	CCNGG	3 cut(s)	988, 1256, 1646
BmsI	GCATC	5 cut(s)	991, 1119, 1434, 1513, 1602
BpuEI	CTTGAG	2 cut(s)	416, 616
BpuMI	CCSGG	2 cut(s)	988, 1256
BsaAI	YACGTR	1 cut(s)	639
BsaJI	CCNNGG	3 cut(s)	228, 412, 454
BsaWI	WCCGGW	2 cut(s)	424, 518
BsaXI	ACNNNNNCTCC	2 cut(s)	368, 398
Bsc4I	CCNNNNNNNGG	6 cut(s)	36, 285, 355, 993, 1139, 1549
Bse1I	ACTGG	1 cut(s)	360
Bse3DI	GCAATG	3 cut(s)	432, 696, 1172
BseAI	TCCGGA	1 cut(s)	424
BseBI	CCWGG	1 cut(s)	1646
BseDI	CCNNGG	3 cut(s)	228, 412, 454
BseLI	CCNNNNNNNGG	6 cut(s)	36, 285, 355, 993, 1139, 1549
BseMI	GCAATG	3 cut(s)	432, 696, 1172
BseMII	CTCAG	1 cut(s)	1151
BseNI	ACTGG	1 cut(s)	360
BseRI	GAGGAG	1 cut(s)	392
BseSI	GKGCMC	2 cut(s)	18, 181
BseXI	GCAGC	2 cut(s)	119, 1538
Bsh1236I	CGCG	2 cut(s)	493, 1545
BshFI	GGCC	2 cut(s)	1570, 1725
BsiHKCI	CYCGRG	1 cut(s)	1601
BsiSI	CCGG	4 cut(s)	425, 519, 987, 1256
BsiWI	CGTACG	1 cut(s)	656
BslFI	GGGAC	3 cut(s)	84, 502, 512
BslI	CCNNNNNNNGG	6 cut(s)	36, 285, 355, 993, 1139, 1549
BsmFI	GGGAC	3 cut(s)	84, 502, 512
BsmI	GAATGC	1 cut(s)	165
BsnI	GGCC	2 cut(s)	1570, 1725
BsoBI	CYCGRG	1 cut(s)	1601
Bsp1286I	GDGCHC	2 cut(s)	18, 181
Bsp13I	TCCGGA	1 cut(s)	424
Bsp143I	GATC	1 cut(s)	703
BspACI	CCGC	4 cut(s)	142, 493, 575, 1543
BspANI	GGCC	2 cut(s)	1570, 1725
BspCNI	CTCAG	1 cut(s)	1152
BspEI	TCCGGA	1 cut(s)	424
BspFNI	CGCG	2 cut(s)	493, 1545
BspQI	GCTCTTC	1 cut(s)	812
BsrDI	GCAATG	3 cut(s)	432, 696, 1172
BsrI	ACTGG	1 cut(s)	360
BssECI	CCNNGG	3 cut(s)	228, 412, 454
BssMI	GATC	1 cut(s)	703
BssSI	CACGAG	1 cut(s)	1629
BssT1I	CCWWGG	1 cut(s)	228
Bst2BI	CACGAG	1 cut(s)	1629
Bst2UI	CCWGG	1 cut(s)	1646
Bst4CI	ACNGT	3 cut(s)	413, 1384, 1761
Bst6I	CTCTTC	4 cut(s)	507, 812, 1489, 1775
BstAPI	GCANNNNNTGC	1 cut(s)	1353
BstBAI	YACGTR	1 cut(s)	639
BstC8I	GCNNGC	3 cut(s)	687, 792, 938
BstDEI	CTNAG	3 cut(s)	242, 1160, 1502
BstDSI	CCRYGG	2 cut(s)	412, 454
BstEII	GGTNACC	1 cut(s)	188
BstFNI	CGCG	2 cut(s)	493, 1545
BstKTI	GATC	1 cut(s)	706
BstMBI	GATC	1 cut(s)	703
BstMWI	GCNNNNNNNGC	4 cut(s)	22, 981, 1353, 1736
BstNI	CCWGG	1 cut(s)	1646
BstNSI	RCATGY	2 cut(s)	922, 979
BstPI	GGTNACC	1 cut(s)	188
BstSCI	CCNGG	3 cut(s)	986, 1254, 1644
BstSFI	CTRYAG	1 cut(s)	1765
BstSLI	GKGCMC	2 cut(s)	18, 181
BstSNI	TACGTA	1 cut(s)	639
BstUI	CGCG	2 cut(s)	493, 1545
BstV1I	GCAGC	2 cut(s)	119, 1538
BsuRI	GGCC	2 cut(s)	1570, 1725
BtgI	CCRYGG	2 cut(s)	412, 454
BtgZI	GCGATG	1 cut(s)	809
Cac8I	GCNNGC	3 cut(s)	687, 792, 938
CseI	GACGC	2 cut(s)	499, 1436
Csp6I	GTAC	3 cut(s)	441, 657, 1146
CspCI	CAANNNNNGTGG	2 cut(s)	760, 795
CviAII	CATG	8 cut(s)	62, 301, 403, 919, 976, 1139, 1181, 1597
CviQI	GTAC	3 cut(s)	441, 657, 1146
DdeI	CTNAG	3 cut(s)	242, 1160, 1502
DpnI	GATC	1 cut(s)	705
DpnII	GATC	1 cut(s)	703
Eam1104I	CTCTTC	4 cut(s)	507, 812, 1489, 1775
EarI	CTCTTC	4 cut(s)	507, 812, 1489, 1775
Eco105I	TACGTA	1 cut(s)	639
Eco130I	CCWWGG	1 cut(s)	228
Eco147I	AGGCCT	1 cut(s)	1725
Eco32I	GATATC	1 cut(s)	430
Eco57I	CTGAAG	1 cut(s)	1701
Eco88I	CYCGRG	1 cut(s)	1601
Eco91I	GGTNACC	1 cut(s)	188
EcoO65I	GGTNACC	1 cut(s)	188
EcoRII	CCWGG	1 cut(s)	1644
EcoRV	GATATC	1 cut(s)	430
EcoT14I	CCWWGG	1 cut(s)	228
ErhI	CCWWGG	1 cut(s)	228
FaeI	CATG	8 cut(s)	65, 304, 406, 922, 979, 1142, 1184, 1600
FalI	AAGNNNNNCTT	2 cut(s)	1609, 1641
FaqI	GGGAC	3 cut(s)	84, 502, 512
FatI	CATG	8 cut(s)	61, 300, 402, 918, 975, 1138, 1180, 1596
FauI	CCCGC	2 cut(s)	135, 568
FauNDI	CATATG	1 cut(s)	1653
FblI	GTMKAC	1 cut(s)	352
Fnu4HI	GCNGC	2 cut(s)	133, 1527
Fsp4HI	GCNGC	2 cut(s)	133, 1527
FspBI	CTAG	4 cut(s)	509, 1047, 1242, 1727
GluI	GCNGC	2 cut(s)	133, 1527
HaeIII	GGCC	2 cut(s)	1570, 1725
HapII	CCGG	4 cut(s)	425, 519, 987, 1256
HgaI	GACGC	2 cut(s)	499, 1436
Hin1II	CATG	8 cut(s)	65, 304, 406, 922, 979, 1142, 1184, 1600
HindIII	AAGCTT	2 cut(s)	467, 800
HinfI	GANTC	3 cut(s)	97, 305, 515
HpaII	CCGG	4 cut(s)	425, 519, 987, 1256
HphI	GGTGA	3 cut(s)	370, 428, 1789
Hpy166II	GTNNAC	3 cut(s)	353, 409, 1673
Hpy188I	TCNGA	2 cut(s)	160, 931
Hpy188III	TCNNGA	6 cut(s)	395, 425, 701, 731, 910, 1810
Hpy8I	GTNNAC	3 cut(s)	353, 409, 1673
HpyAV	CCTTC	6 cut(s)	478, 875, 1505, 1547, 1700, 1715
HpyCH4III	ACNGT	3 cut(s)	413, 1384, 1761
HpyCH4IV	ACGT	3 cut(s)	638, 659, 1420
HpyF10VI	GCNNNNNNNGC	4 cut(s)	22, 981, 1353, 1736
HpyF3I	CTNAG	3 cut(s)	242, 1160, 1502
HpySE526I	ACGT	3 cut(s)	638, 659, 1420
Hsp92II	CATG	8 cut(s)	65, 304, 406, 922, 979, 1142, 1184, 1600
Kpn2I	TCCGGA	1 cut(s)	424
Kzo9I	GATC	1 cut(s)	703
LguI	GCTCTTC	1 cut(s)	812
LmnI	GCTCC	1 cut(s)	351
Lsp1109I	GCAGC	2 cut(s)	119, 1538
LweI	GCATC	5 cut(s)	991, 1119, 1434, 1513, 1602
MaeI	CTAG	4 cut(s)	509, 1047, 1242, 1727
MaeII	ACGT	3 cut(s)	638, 659, 1420
MaeIII	GTNAC	7 cut(s)	188, 335, 634, 844, 1054, 1250, 1264
MalI	GATC	1 cut(s)	705
MboI	GATC	1 cut(s)	703
MboII	GAAGA	7 cut(s)	105, 300, 524, 829, 1138, 1476, 1792
MfeI	CAATTG	4 cut(s)	710, 1110, 1215, 1635
MhlI	GDGCHC	2 cut(s)	18, 181
MlyI	GAGTC	2 cut(s)	106, 524
MmeI	TCCRAC	2 cut(s)	585, 870
MroI	TCCGGA	1 cut(s)	424
MseI	TTAA	5 cut(s)	449, 1074, 1332, 1340, 1533
MspA1I	CMGCKG	1 cut(s)	1793
MspI	CCGG	4 cut(s)	425, 519, 987, 1256
MspR9I	CCNGG	3 cut(s)	988, 1256, 1646
MunI	CAATTG	4 cut(s)	710, 1110, 1215, 1635
Mva1269I	GAATGC	1 cut(s)	165
MvaI	CCWGG	1 cut(s)	1646
MvnI	CGCG	2 cut(s)	493, 1545
MwoI	GCNNNNNNNGC	4 cut(s)	22, 981, 1353, 1736
NciI	CCSGG	2 cut(s)	988, 1256
NdeI	CATATG	1 cut(s)	1653
NdeII	GATC	1 cut(s)	703
NlaIII	CATG	8 cut(s)	65, 304, 406, 922, 979, 1142, 1184, 1600
NspI	RCATGY	2 cut(s)	922, 979
PceI	AGGCCT	1 cut(s)	1725
PciSI	GCTCTTC	1 cut(s)	812
PctI	GAATGC	1 cut(s)	165
PfeI	GAWTC	1 cut(s)	305
Pfl23II	CGTACG	1 cut(s)	656
PkrI	GCNGC	2 cut(s)	134, 1528
PleI	GAGTC	2 cut(s)	105, 523
PpsI	GAGTC	2 cut(s)	105, 523
Ppu21I	YACGTR	1 cut(s)	639
PsiI	TTATAA	1 cut(s)	1167
Psp6I	CCWGG	1 cut(s)	1644
PspEI	GGTNACC	1 cut(s)	188
PspGI	CCWGG	1 cut(s)	1644
PspLI	CGTACG	1 cut(s)	656
PvuII	CAGCTG	1 cut(s)	1793
RsaI	GTAC	3 cut(s)	442, 658, 1147
RsaNI	GTAC	3 cut(s)	441, 657, 1146
SapI	GCTCTTC	1 cut(s)	812
SaqAI	TTAA	5 cut(s)	449, 1074, 1332, 1340, 1533
SatI	GCNGC	2 cut(s)	133, 1527
Sau3AI	GATC	1 cut(s)	703
SchI	GAGTC	2 cut(s)	106, 524
ScrFI	CCNGG	3 cut(s)	988, 1256, 1646
SduI	GDGCHC	2 cut(s)	18, 181
SfaNI	GCATC	5 cut(s)	991, 1119, 1434, 1513, 1602
SfcI	CTRYAG	1 cut(s)	1765
SmlI	CTYRAG	2 cut(s)	395, 595
SmoI	CTYRAG	2 cut(s)	395, 595
SnaBI	TACGTA	1 cut(s)	639
SseBI	AGGCCT	1 cut(s)	1725
SsiI	CCGC	4 cut(s)	142, 493, 575, 1543
SspI	AATATT	1 cut(s)	1066
SspMI	CTAG	4 cut(s)	509, 1047, 1242, 1727
StuI	AGGCCT	1 cut(s)	1725
StyD4I	CCNGG	3 cut(s)	986, 1254, 1644
StyI	CCWWGG	1 cut(s)	228
TaaI	ACNGT	3 cut(s)	413, 1384, 1761
TaiI	ACGT	3 cut(s)	641, 662, 1423
TaqI	TCGA	2 cut(s)	1105, 1661
TatI	WGTACW	1 cut(s)	1145
TfiI	GAWTC	1 cut(s)	305
Tru1I	TTAA	5 cut(s)	449, 1074, 1332, 1340, 1533
Tru9I	TTAA	5 cut(s)	449, 1074, 1332, 1340, 1533
TseI	GCWGC	2 cut(s)	132, 1526
TspDTI	ATGAA	8 cut(s)	50, 515, 812, 830, 909, 1169, 1734, 1770
TspGWI	ACGGA	2 cut(s)	338, 443
XapI	RAATTY	2 cut(s)	326, 905
XceI	RCATGY	2 cut(s)	922, 979
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1432
XmiI	GTMKAC	1 cut(s)	352
XspI	CTAG	4 cut(s)	509, 1047, 1242, 1727

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.