Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0007789

Physical Location & Seq

Genomic Coordinates Forward (+)

49385063 .. 49389291

Gene Structure 4229 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1394600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2502 bp

ATGGCGGCAAAATCAGCTCCGCCCCTTTTCCTTGAAGATTGGCTGAGGAGTGTGAGCGGCGGTGGCAGCAGCAGGAACACCTCCGCCGCCGTCTCCAGAAACTCATCCACCTCATCCGCAAGAGCCATAATTCAGGCATGGGCCGAGCTCCGCGACTGCCTCCAACACCAATCGTTCCAATCCCGCCATCTCCAGTCCCTCAAAACCCTCGCCAACTCCCAGACTTCTCTCCACGTTGCCGACCCCCAAGCCAAGCTTCTGCTCTCCATTCTCTCCTCTCCCGACCTCTTTCTTCCTCCTCAGTCCTATCCGCTCTTCCTCCGACTGCTTTATATTTGGGTCCGGAAATCCGCCCGGCCCAATTCGGGTCTCATTGATTCGGCTGTGGAAGTTCTCTCTATTCTCTTCCTTACCCAGTATGTATCAAACAAGAGTCCTGCCCTCTTTTCTGAAGGCGTTCTCCTTCTGGGTGCCTTCTCTTTCGCTCATTCGGCCTCCGAAAGCTCGAAAAAAGATTGCTTGGGGCTGCTCTGTAGGCTGTTGGCGGAGGACTACCAGGTACTTGGGTCATTTGGTGAATTGATTCCGGACGTGCTTGCCGGAATTGGGTATGCTCTATCTTCTTCTGTGAATGTTCATTTTGTTACTGTTTTGGATTTCGTGTTGAGTGTTTGGGGTAAGGAAAGTGGACCTCCTGGCAGTGTTTGTCATGGGTTGATGATTCTGCATTTGATGGAATTGGTAATGTCTGGTTTGAGCAGTTTTCGCTCTGTCGAAAAAGTTGATACCTTTTCCCGGGAGGTTTTAGAGACCGATAAAGCAAATTATGTTCCGTTTGCTGTTGTCATGGCTGCAGCTGGAGTACTGAGGGCGTTAAGTAGATCTATAGTGAGTGGTCTTGGGATGGACACTATTTCCAGATTAAGACGGTCTGCAGAAGATCGGATAGAATCTGTAGCAAGAGAGTTAGTTTCAAGAACTATAGAGTTTACCAGCTCAGATAATGATCTCACAGATAATCTTCTGTTACAGTCTGTTTCGATAGCATTGGCTCGAACTGGTGCGGTCTCTGCTCGTGCCCCTTTGTTTATATGCCTTGCTTCTGCATTGTTGACTGAAAGCTTTCCCTTGAGACGTTTATACATGAAGGTACTTAAACCAATGCATGACAGTTCAGCTGTACCGAGGATTAATGAGGTCAGGGAACACCTGGAAAGTCTTACTTTTAAGGAAGCAGGGGCCATAACCGGTGTTTTCTGCAATCTCTATGTTTCAGTTGATGAACAGAGCCAACATATGGTGGAGAATCTTCTGTGGGATTACTGTCAACAGATATACATGGAGCACCGACAGGTGGCTTTGGTTCTTCGTGGTAAAGAGGATGAAGTACTTGGAGATTTGGAGAAAATTGCTGAATCTGCTTTTCTTATGGTTGTACTTTTTGCATTGACCGTCACAAAGCACAAGTTGAATTCAAAATTCAGTCAAGAAACTCAAATGGATACATCAGTACGAATACTTATTTCGTTTTCTTGTCTCGAGTATTTCCGCCGCATTCGTTTGCCAGAATACATGGATACAATTCGAGGTATTGTTGTGAGTGTCCAGGAAAGTGATTCTGCTTGTGTATCTTTTGTAAGATCCATGCCCACTTATGGTGACTTGACGAACGGCCCAGACTTTTCTTTCCTGCGAAAGATGGAATATGTGTGGACCAAGGATGAGGTTCAAACTGCTCGCGTTCTGTTTTACCTACGGGTCATACCAACTTGCATTGCACGTTTGCCTAGCCCTGTATTTGGGGATGTGGTTGCTCCAACTATGTTCTTATATATGGGTCATCCTAACGGAAAAGTACCTCGAGCCTCACATTCTATGTTTTCTGCATTCATATCTTCGGGGAAGGATTCTGATCAGGATGAAAGAGAGTTATTAAAGGAGAAGCTTGTTTTCTACTACATGCAAAGATCACTAAAGGAATATCCCGAAATTACCCCTTTTGAGGGAATGGCTTCTGGAGTTGCAGCCTTGGTTCGACATCTTCCTGCTGGAAGCCCACCCATATTTTATTGTATACATTGTCTTGTCGAGAAAGCTAAAAGGCTTTGCATTGAAGACTTCGCTCACCAGGCTGATATGTGGAAGAACTGGCAAGGAGAGTCAGAGCCTGGCAAGAAAATCCTAGACTTACTTTTACGGCTGATTTCCCTAGTTGATATACAGGTACTACCGGACTTGATGAAGCAGTTGGCACAGCTAATAGCCCAACTACCAAAGGATGGCCAGAATATGATTCTAAATGAGTTATATTCACAGGTTGCAGAATCTGACGATGTTACTCGCAAGCCTACTTTAGTTTCTTGGCTGCAATCATTGTCTTACCTTTGTTTTCAAGAAACAAGTGGGAGTGCAGCATCCAGAAAGGTTGTAACTGAAGCAAAAATCACTTCCAAGCAGACTCCAGACCTATCACGTGAGACTAGCCTAAATGCTCGATTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

834

Amino Acids

92.66

Weight (kDa)

6.42

Isoelectric Point (pI)

50.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007789)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73970 AT1G73970 AT1G73970 AT1G73970
fragaria_vesca	FvH4_4g06790 FvH4_4g06790 FvH4_4g06790 FvH4_4g06790 FvH4_4g06790
malus_domestica	MD15G1394600.v1.1
prunus_persica	Prupe.1G071100_v2.0.a1
pyrus_communis	pycom15g35540
rosa_chinensis	RchiOBHm_Chr4g0398711
rosa_laevigata	RLG00000009329
rosa_multiflora	Rmu_co8494159.1_g000001
rosa_roxburghii	Rroxscaffold_5G00343670
rosa_rugosa	Rorug04G0011000 Rorug04G0011100
rosa_samantha	Rh4AG088800 Rh4BG085800 Rh4CG096900 Rh4DG080300 Rh7BG226400
rosa_wichuraiana	Rw4G007350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	470
AccB7I	CCANNNNNTGG	2 cut(s)	1297, 2279
AccBSI	CCGCTC	2 cut(s)	57, 313
AccI	GTMKAC	1 cut(s)	2074
AccII	CGCG	2 cut(s)	153, 1740
AccIII	TCCGGA	2 cut(s)	342, 586
AclWI	GGATC	1 cut(s)	1635
AcoI	YGGCCR	1 cut(s)	2281
AcsI	RAATTY	2 cut(s)	1471, 1478
AcuI	CTGAAG	2 cut(s)	471, 2454
AcvI	CACGTG	1 cut(s)	2474
AfaI	GTAC	9 cut(s)	561, 864, 1152, 1182, 1389, 1437, 1512, 1857, 2226
AgeI	ACCGGT	1 cut(s)	1247
AgsI	TTSAA	7 cut(s)	35, 975, 1471, 1476, 1730, 2114, 2393
AjiI	CACGTC	1 cut(s)	592
AjnI	CCWGG	6 cut(s)	555, 694, 1209, 1605, 2127, 2167
AjuI	GAANNNNNNNTTGG	2 cut(s)	240, 272
Alw21I	GWGCWC	2 cut(s)	150, 1347
Alw26I	GTCTC	7 cut(s)	97, 374, 803, 1072, 1126, 1541, 2471
AlwI	GGATC	1 cut(s)	1635
AlwNI	CAGNNNCTG	2 cut(s)	2168, 2327
Ama87I	CYCGRG	3 cut(s)	795, 1538, 1860
Aor13HI	TCCGGA	2 cut(s)	342, 586
AoxI	GGCC	6 cut(s)	141, 356, 492, 1239, 1672, 2281
ApeKI	GCWGC	8 cut(s)	66, 69, 526, 851, 854, 2024, 2365, 2411
ApoI	RAATTY	2 cut(s)	1471, 1478
AseI	ATTAAT	1 cut(s)	1191
AsiGI	ACCGGT	1 cut(s)	1247
Asp700I	GAANNNNTTC	4 cut(s)	456, 582, 1122, 2011
AspS9I	GGNCC	7 cut(s)	141, 340, 357, 689, 1239, 1673, 1713
AsuC2I	CCSGG	3 cut(s)	355, 796, 797
AsuHPI	GGTGA	3 cut(s)	587, 1670, 2117
AvaI	CYCGRG	3 cut(s)	795, 1538, 1860
AvaII	GGWCC	3 cut(s)	340, 689, 1713
BaeGI	GKGCMC	1 cut(s)	1081
BaeI	ACNNNNGTAYC	4 cut(s)	551, 584, 1494, 1527
BalI	TGGCCA	1 cut(s)	2283
BanI	GGYRCC	1 cut(s)	470
BanII	GRGCYC	1 cut(s)	150
BauI	CACGAG	1 cut(s)	1074
BbrPI	CACGTG	1 cut(s)	2474
BbsI	GAAGAC	1 cut(s)	2121
Bbv12I	GWGCWC	2 cut(s)	150, 1347
BbvCI	CCTCAGC	1 cut(s)	44
BbvI	GCAGC	8 cut(s)	78, 81, 513, 838, 866, 2036, 2352, 2423
BccI	CCATC	5 cut(s)	195, 727, 898, 1693, 2273
BceAI	ACGGC	3 cut(s)	74, 1687, 2213
BciT130I	CCWGG	6 cut(s)	557, 696, 1211, 1607, 2129, 2169
BciVI	GTATCC	2 cut(s)	1495, 1570
BclI	TGATCA	1 cut(s)	1912
BcnI	CCSGG	3 cut(s)	355, 796, 797
BcoDI	GTCTC	7 cut(s)	97, 374, 803, 1072, 1126, 1541, 2471
BfaI	CTAG	4 cut(s)	1788, 2183, 2210, 2481
BfmI	CTRYAG	6 cut(s)	532, 852, 885, 933, 954, 981
BfuI	GTATCC	2 cut(s)	1495, 1570
BglII	AGATCT	1 cut(s)	881
BmcAI	AGTACT	2 cut(s)	864, 1389
Bme1390I	CCNGG	9 cut(s)	355, 557, 696, 796, 797, 1211, 1607, 2129, 2169
Bme18I	GGWCC	3 cut(s)	340, 689, 1713
BmeT110I	CYCGRG	3 cut(s)	795, 1538, 1860
BmgBI	CACGTC	1 cut(s)	592
BmgT120I	GGNCC	7 cut(s)	141, 340, 357, 689, 1239, 1673, 1713
BmiI	GGNNCC	3 cut(s)	341, 472, 1240
BmrFI	CCNGG	9 cut(s)	355, 557, 696, 796, 797, 1211, 1607, 2129, 2169
BmrI	ACTGGG	1 cut(s)	409
BmsI	GCATC	1 cut(s)	2423
BmuI	ACTGGG	1 cut(s)	409
BpiI	GAAGAC	1 cut(s)	2121
BpmI	CTGGAG	5 cut(s)	79, 176, 879, 2037, 2445
Bpu10I	CCTNAGC	1 cut(s)	44
BpuEI	CTTGAG	1 cut(s)	1150
BpuMI	CCSGG	3 cut(s)	355, 796, 797
BsaAI	YACGTR	1 cut(s)	2474
BsaBI	GATNNNNATC	2 cut(s)	1005, 1911
BsaI	GGTCTC	3 cut(s)	374, 803, 1072
BsaJI	CCNNGG	4 cut(s)	795, 1184, 1716, 2028
BsaWI	WCCGGW	4 cut(s)	342, 586, 1247, 2230
Bse118I	RCCGGY	1 cut(s)	1247
Bse1I	ACTGG	4 cut(s)	193, 415, 1063, 2153
Bse3DI	GCAATG	1 cut(s)	1773
Bse8I	GATNNNNATC	2 cut(s)	1005, 1911
BseAI	TCCGGA	2 cut(s)	342, 586
BseBI	CCWGG	6 cut(s)	557, 696, 1211, 1607, 2129, 2169
BseDI	CCNNGG	4 cut(s)	795, 1184, 1716, 2028
BseJI	GATNNNNATC	2 cut(s)	1005, 1911
BseMI	GCAATG	1 cut(s)	1773
BseMII	CTCAG	4 cut(s)	35, 314, 857, 1011
BseNI	ACTGG	4 cut(s)	193, 415, 1063, 2153
BseRI	GAGGAG	3 cut(s)	61, 265, 288
BseSI	GKGCMC	1 cut(s)	1081
BseXI	GCAGC	8 cut(s)	78, 81, 513, 838, 866, 2036, 2352, 2423
BsgI	GTGCAG	1 cut(s)	2430
Bsh1236I	CGCG	2 cut(s)	153, 1740
BshFI	GGCC	6 cut(s)	143, 358, 494, 1241, 1674, 2283
BshNI	GGYRCC	1 cut(s)	470
BshTI	ACCGGT	1 cut(s)	1247
BsiHKAI	GWGCWC	2 cut(s)	150, 1347
BsiHKCI	CYCGRG	3 cut(s)	795, 1538, 1860
BsiSI	CCGG	7 cut(s)	343, 355, 587, 600, 796, 1248, 2231
BslFI	GGGAC	1 cut(s)	181
BsmAI	GTCTC	7 cut(s)	97, 374, 803, 1072, 1126, 1541, 2471
BsmBI	CGTCTC	2 cut(s)	97, 1126
BsmFI	GGGAC	1 cut(s)	181
BsmI	GAATGC	2 cut(s)	1554, 1886
BsnI	GGCC	6 cut(s)	143, 358, 494, 1241, 1674, 2283
Bso31I	GGTCTC	3 cut(s)	374, 803, 1072
BsoBI	CYCGRG	3 cut(s)	795, 1538, 1860
Bsp1286I	GDGCHC	3 cut(s)	150, 1081, 1347
Bsp13I	TCCGGA	2 cut(s)	342, 586
Bsp143I	GATC	6 cut(s)	881, 940, 1006, 1640, 1912, 1967
BspANI	GGCC	6 cut(s)	143, 358, 494, 1241, 1674, 2283
BspCNI	CTCAG	4 cut(s)	36, 313, 858, 1010
BspEI	TCCGGA	2 cut(s)	342, 586
BspFNI	CGCG	2 cut(s)	153, 1740
BspLI	GGNNCC	3 cut(s)	341, 472, 1240
BspMAI	CTGCAG	2 cut(s)	856, 937
BspPI	GGATC	1 cut(s)	1635
BspQI	GCTCTTC	1 cut(s)	320
BspT107I	GGYRCC	1 cut(s)	470
BspTNI	GGTCTC	3 cut(s)	374, 803, 1072
BsrBI	CCGCTC	2 cut(s)	57, 313
BsrDI	GCAATG	1 cut(s)	1773
BsrFI	RCCGGY	1 cut(s)	1247
BsrI	ACTGG	4 cut(s)	193, 415, 1063, 2153
BssAI	RCCGGY	1 cut(s)	1247
BssECI	CCNNGG	4 cut(s)	795, 1184, 1716, 2028
BssMI	GATC	6 cut(s)	881, 940, 1006, 1640, 1912, 1967
BssNAI	GTATAC	1 cut(s)	2075
BssSI	CACGAG	1 cut(s)	1074
BssT1I	CCWWGG	2 cut(s)	1716, 2028
Bst1107I	GTATAC	1 cut(s)	2075
Bst2BI	CACGAG	1 cut(s)	1074
Bst2UI	CCWGG	6 cut(s)	557, 696, 1211, 1607, 2129, 2169
Bst4CI	ACNGT	6 cut(s)	649, 930, 1032, 1172, 1325, 1453
Bst6I	CTCTTC	2 cut(s)	320, 410
BstBAI	YACGTR	1 cut(s)	2474
BstC8I	GCNNGC	3 cut(s)	597, 1738, 2345
BstDEI	CTNAG	4 cut(s)	44, 300, 866, 997
BstFNI	CGCG	2 cut(s)	153, 1740
BstKTI	GATC	6 cut(s)	884, 943, 1009, 1643, 1915, 1970
BstMAI	GTCTC	7 cut(s)	97, 374, 803, 1072, 1126, 1541, 2471
BstMBI	GATC	6 cut(s)	881, 940, 1006, 1640, 1912, 1967
BstMWI	GCNNNNNNNGC	9 cut(s)	14, 63, 66, 491, 535, 765, 1070, 1418, 2129
BstNI	CCWGG	6 cut(s)	557, 696, 1211, 1607, 2129, 2169
BstNSI	RCATGY	1 cut(s)	1963
BstSCI	CCNGG	9 cut(s)	353, 555, 694, 794, 795, 1209, 1605, 2127, 2167
BstSFI	CTRYAG	6 cut(s)	532, 852, 885, 933, 954, 981
BstSLI	GKGCMC	1 cut(s)	1081
BstUI	CGCG	2 cut(s)	153, 1740
BstV1I	GCAGC	8 cut(s)	78, 81, 513, 838, 866, 2036, 2352, 2423
BstV2I	GAAGAC	1 cut(s)	2121
BstX2I	RGATCY	2 cut(s)	881, 1640
BstXI	CCANNNNNNTGG	1 cut(s)	563
BstYI	RGATCY	2 cut(s)	881, 1640
BstZ17I	GTATAC	1 cut(s)	2075
BsuI	GTATCC	2 cut(s)	1495, 1570
BsuRI	GGCC	6 cut(s)	143, 358, 494, 1241, 1674, 2283
BtrI	CACGTC	1 cut(s)	592
BtsI	GCAGTG	1 cut(s)	706
BtsIMutI	CAGTG	1 cut(s)	706
Cac8I	GCNNGC	3 cut(s)	597, 1738, 2345
CaiI	CAGNNNCTG	2 cut(s)	2168, 2327
Cfr10I	RCCGGY	1 cut(s)	1247
Cfr13I	GGNCC	7 cut(s)	141, 340, 357, 689, 1239, 1673, 1713
Cfr9I	CCCGGG	1 cut(s)	795
CsiI	ACCWGGT	1 cut(s)	555
Csp6I	GTAC	9 cut(s)	560, 863, 1151, 1181, 1388, 1436, 1511, 1856, 2225
CspAI	ACCGGT	1 cut(s)	1247
CviAII	CATG	9 cut(s)	138, 710, 847, 1144, 1166, 1339, 1573, 1645, 1960
CviQI	GTAC	9 cut(s)	560, 863, 1151, 1181, 1388, 1436, 1511, 1856, 2225
DdeI	CTNAG	4 cut(s)	44, 300, 866, 997
DpnI	GATC	6 cut(s)	883, 942, 1008, 1642, 1914, 1969
DpnII	GATC	6 cut(s)	881, 940, 1006, 1640, 1912, 1967
EaeI	YGGCCR	1 cut(s)	2281
Eam1104I	CTCTTC	2 cut(s)	320, 410
EarI	CTCTTC	2 cut(s)	320, 410
EciI	GGCGGA	5 cut(s)	9, 73, 340, 560, 1538
Ecl136II	GAGCTC	1 cut(s)	148
Eco130I	CCWWGG	2 cut(s)	1716, 2028
Eco24I	GRGCYC	1 cut(s)	150
Eco31I	GGTCTC	3 cut(s)	374, 803, 1072
Eco47I	GGWCC	3 cut(s)	340, 689, 1713
Eco53kI	GAGCTC	1 cut(s)	148
Eco57I	CTGAAG	2 cut(s)	471, 2454
Eco72I	CACGTG	1 cut(s)	2474
Eco88I	CYCGRG	3 cut(s)	795, 1538, 1860
EcoICRI	GAGCTC	1 cut(s)	148
EcoRI	GAATTC	1 cut(s)	1471
EcoRII	CCWGG	6 cut(s)	555, 694, 1209, 1605, 2127, 2167
EcoT14I	CCWWGG	2 cut(s)	1716, 2028
EcoT22I	ATGCAT	1 cut(s)	1167
EcoT38I	GRGCYC	1 cut(s)	150
ErhI	CCWWGG	2 cut(s)	1716, 2028
Esp3I	CGTCTC	2 cut(s)	97, 1126
FaeI	CATG	9 cut(s)	141, 713, 850, 1147, 1169, 1342, 1576, 1648, 1963
FalI	AAGNNNNNCTT	4 cut(s)	240, 272, 1207, 1239
FaqI	GGGAC	1 cut(s)	181
FatI	CATG	9 cut(s)	137, 709, 846, 1143, 1165, 1338, 1572, 1644, 1959
FauI	CCCGC	1 cut(s)	191
FauNDI	CATATG	1 cut(s)	1296
FbaI	TGATCA	1 cut(s)	1912
FblI	GTMKAC	1 cut(s)	2074
FriOI	GRGCYC	1 cut(s)	150
FspBI	CTAG	4 cut(s)	1788, 2183, 2210, 2481
GsuI	CTGGAG	5 cut(s)	79, 176, 879, 2037, 2445
HaeIII	GGCC	6 cut(s)	143, 358, 494, 1241, 1674, 2283
HapII	CCGG	7 cut(s)	343, 355, 587, 600, 796, 1248, 2231
Hin1II	CATG	9 cut(s)	141, 713, 850, 1147, 1169, 1342, 1576, 1648, 1963
HincII	GTYRAC	2 cut(s)	1113, 1328
HindII	GTYRAC	2 cut(s)	1113, 1328
HindIII	AAGCTT	3 cut(s)	254, 1120, 1943
HpaII	CCGG	7 cut(s)	343, 355, 587, 600, 796, 1248, 2231
HphI	GGTGA	3 cut(s)	587, 1670, 2117
Hpy166II	GTNNAC	6 cut(s)	689, 990, 1113, 1328, 1713, 2075
Hpy188I	TCNGA	8 cut(s)	323, 451, 499, 945, 1000, 1912, 2164, 2329
Hpy8I	GTNNAC	6 cut(s)	689, 990, 1113, 1328, 1713, 2075
HpyAV	CCTTC	5 cut(s)	446, 473, 484, 1141, 1897
HpyCH4III	ACNGT	6 cut(s)	649, 930, 1032, 1172, 1325, 1453
HpyCH4IV	ACGT	5 cut(s)	234, 591, 1135, 1780, 2473
HpyF10VI	GCNNNNNNNGC	9 cut(s)	14, 63, 66, 491, 535, 765, 1070, 1418, 2129
HpyF3I	CTNAG	4 cut(s)	44, 300, 866, 997
HpySE526I	ACGT	5 cut(s)	234, 591, 1135, 1780, 2473
Hsp92II	CATG	9 cut(s)	141, 713, 850, 1147, 1169, 1342, 1576, 1648, 1963
Kpn2I	TCCGGA	2 cut(s)	342, 586
Ksp22I	TGATCA	1 cut(s)	1912
Kzo9I	GATC	6 cut(s)	881, 940, 1006, 1640, 1912, 1967
LguI	GCTCTTC	1 cut(s)	320
LmnI	GCTCC	4 cut(s)	22, 153, 1342, 1819
Lsp1109I	GCAGC	8 cut(s)	78, 81, 513, 838, 866, 2036, 2352, 2423
LweI	GCATC	1 cut(s)	2423
MabI	ACCWGGT	1 cut(s)	555
MaeI	CTAG	4 cut(s)	1788, 2183, 2210, 2481
MaeII	ACGT	5 cut(s)	234, 591, 1135, 1780, 2473
MaeIII	GTNAC	6 cut(s)	643, 1026, 1453, 1658, 2335, 2428
MalI	GATC	6 cut(s)	883, 942, 1008, 1642, 1914, 1969
MbiI	CCGCTC	2 cut(s)	57, 313
MboI	GATC	6 cut(s)	881, 940, 1006, 1640, 1912, 1967
MflI	RGATCY	2 cut(s)	881, 1640
MhlI	GDGCHC	3 cut(s)	150, 1081, 1347
MlsI	TGGCCA	1 cut(s)	2283
MluNI	TGGCCA	1 cut(s)	2283
MlyI	GAGTC	3 cut(s)	442, 2168, 2452
MmeI	TCCRAC	3 cut(s)	187, 346, 1841
Mox20I	TGGCCA	1 cut(s)	2283
Mph1103I	ATGCAT	1 cut(s)	1167
MroI	TCCGGA	2 cut(s)	342, 586
MroXI	GAANNNNTTC	4 cut(s)	456, 582, 1122, 2011
MscI	TGGCCA	1 cut(s)	2283
MseI	TTAA	6 cut(s)	875, 923, 1155, 1191, 1227, 1934
Msp20I	TGGCCA	1 cut(s)	2283
MspA1I	CMGCKG	2 cut(s)	857, 1178
MspI	CCGG	7 cut(s)	343, 355, 587, 600, 796, 1248, 2231
MspR9I	CCNGG	9 cut(s)	355, 557, 696, 796, 797, 1211, 1607, 2129, 2169
Mva1269I	GAATGC	2 cut(s)	1554, 1886
MvaI	CCWGG	6 cut(s)	557, 696, 1211, 1607, 2129, 2169
MvnI	CGCG	2 cut(s)	153, 1740
MwoI	GCNNNNNNNGC	9 cut(s)	14, 63, 66, 491, 535, 765, 1070, 1418, 2129
NciI	CCSGG	3 cut(s)	355, 796, 797
NdeI	CATATG	1 cut(s)	1296
NdeII	GATC	6 cut(s)	881, 940, 1006, 1640, 1912, 1967
NlaIII	CATG	9 cut(s)	141, 713, 850, 1147, 1169, 1342, 1576, 1648, 1963
NlaIV	GGNNCC	3 cut(s)	341, 472, 1240
NmeAIII	GCCGAG	1 cut(s)	169
NmuCI	GTSAC	2 cut(s)	1453, 1658
NsiI	ATGCAT	1 cut(s)	1167
NspI	RCATGY	1 cut(s)	1963
PaeR7I	CTCGAG	2 cut(s)	1538, 1860
PciSI	GCTCTTC	1 cut(s)	320
PctI	GAATGC	2 cut(s)	1554, 1886
PdmI	GAANNNNTTC	4 cut(s)	456, 582, 1122, 2011
PflMI	CCANNNNNTGG	2 cut(s)	1297, 2279
PfoI	TCCNGGA	1 cut(s)	1605
PinAI	ACCGGT	1 cut(s)	1247
PleI	GAGTC	3 cut(s)	441, 2167, 2452
PmaCI	CACGTG	1 cut(s)	2474
PmlI	CACGTG	1 cut(s)	2474
PpsI	GAGTC	3 cut(s)	441, 2167, 2452
Ppu21I	YACGTR	1 cut(s)	2474
PshBI	ATTAAT	1 cut(s)	1191
Psp124BI	GAGCTC	1 cut(s)	150
Psp6I	CCWGG	6 cut(s)	555, 694, 1209, 1605, 2127, 2167
PspCI	CACGTG	1 cut(s)	2474
PspGI	CCWGG	6 cut(s)	555, 694, 1209, 1605, 2127, 2167
PspN4I	GGNNCC	3 cut(s)	341, 472, 1240
PspPI	GGNCC	7 cut(s)	141, 340, 357, 689, 1239, 1673, 1713
PspXI	VCTCGAGB	1 cut(s)	1860
PstI	CTGCAG	2 cut(s)	856, 937
PstNI	CAGNNNCTG	2 cut(s)	2168, 2327
PsuI	RGATCY	2 cut(s)	881, 1640
PvuII	CAGCTG	2 cut(s)	857, 1178
RsaI	GTAC	9 cut(s)	561, 864, 1152, 1182, 1389, 1437, 1512, 1857, 2226
RsaNI	GTAC	9 cut(s)	560, 863, 1151, 1181, 1388, 1436, 1511, 1856, 2225
SacI	GAGCTC	1 cut(s)	150
SapI	GCTCTTC	1 cut(s)	320
SaqAI	TTAA	6 cut(s)	875, 923, 1155, 1191, 1227, 1934
Sau3AI	GATC	6 cut(s)	881, 940, 1006, 1640, 1912, 1967
Sau96I	GGNCC	7 cut(s)	141, 340, 357, 689, 1239, 1673, 1713
ScaI	AGTACT	2 cut(s)	864, 1389
SchI	GAGTC	3 cut(s)	442, 2168, 2452
ScrFI	CCNGG	9 cut(s)	355, 557, 696, 796, 797, 1211, 1607, 2129, 2169
SduI	GDGCHC	3 cut(s)	150, 1081, 1347
SexAI	ACCWGGT	1 cut(s)	555
SfaNI	GCATC	1 cut(s)	2423
SfcI	CTRYAG	6 cut(s)	532, 852, 885, 933, 954, 981
Sfr274I	CTCGAG	2 cut(s)	1538, 1860
SinI	GGWCC	3 cut(s)	340, 689, 1713
SlaI	CTCGAG	2 cut(s)	1538, 1860
SmaI	CCCGGG	1 cut(s)	797
SmlI	CTYRAG	3 cut(s)	1129, 1538, 1860
SmoI	CTYRAG	3 cut(s)	1129, 1538, 1860
SspMI	CTAG	4 cut(s)	1788, 2183, 2210, 2481
SstI	GAGCTC	1 cut(s)	150
StyD4I	CCNGG	9 cut(s)	353, 555, 694, 794, 795, 1209, 1605, 2127, 2167
StyI	CCWWGG	2 cut(s)	1716, 2028
TaaI	ACNGT	6 cut(s)	649, 930, 1032, 1172, 1325, 1453
TaiI	ACGT	5 cut(s)	237, 594, 1138, 1783, 2476
TaqII	GACCGA	1 cut(s)	827
TatI	WGTACW	3 cut(s)	862, 1387, 1435
TauI	GCSGC	4 cut(s)	8, 60, 89, 1554
Tru1I	TTAA	6 cut(s)	875, 923, 1155, 1191, 1227, 1934
Tru9I	TTAA	6 cut(s)	875, 923, 1155, 1191, 1227, 1934
TscAI	CASTG	1 cut(s)	706
TseFI	GTSAC	2 cut(s)	1453, 1658
TseI	GCWGC	8 cut(s)	66, 69, 526, 851, 854, 2024, 2365, 2411
Tsp45I	GTSAC	2 cut(s)	1453, 1658
TspDTI	ATGAA	7 cut(s)	626, 1160, 1296, 1398, 1879, 1935, 2255
TspGWI	ACGGA	2 cut(s)	822, 1863
TspMI	CCCGGG	1 cut(s)	795
TspRI	CASTG	1 cut(s)	706
Van91I	CCANNNNNTGG	2 cut(s)	1297, 2279
VpaK11BI	GGWCC	3 cut(s)	340, 689, 1713
VspI	ATTAAT	1 cut(s)	1191
XapI	RAATTY	2 cut(s)	1471, 1478
XceI	RCATGY	1 cut(s)	1963
XhoI	CTCGAG	2 cut(s)	1538, 1860
XmaI	CCCGGG	1 cut(s)	795
XmiI	GTMKAC	1 cut(s)	2074
XmnI	GAANNNNTTC	4 cut(s)	456, 582, 1122, 2011
XspI	CTAG	4 cut(s)	1788, 2183, 2210, 2481
ZrmI	AGTACT	2 cut(s)	864, 1389
Zsp2I	ATGCAT	1 cut(s)	1167

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.