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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G73970 AT1G73970 AT1G73970 AT1G73970 |
| fragaria_vesca | FvH4_4g06790 FvH4_4g06790 FvH4_4g06790 FvH4_4g06790 FvH4_4g06790 |
| malus_domestica | MD15G1394600.v1.1 |
| prunus_persica | Prupe.1G071100_v2.0.a1 |
| pyrus_communis | pycom15g35540 |
| rosa_chinensis | RchiOBHm_Chr4g0398711 |
| rosa_laevigata | RLG00000009329 |
| rosa_multiflora | Rmu_co8494159.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00343670 |
| rosa_rugosa | Rorug04G0011000 Rorug04G0011100 |
| rosa_samantha | Rh4AG088800 Rh4BG085800 Rh4CG096900 Rh4DG080300 Rh7BG226400 |
| rosa_wichuraiana | Rw4G007350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2074 |
| AccII | CGCG | 1 cut(s) | 830 |
| AciI | CCGC | 2 cut(s) | 339, 830 |
| AclWI | GGATC | 2 cut(s) | 565, 1187 |
| AcoI | YGGCCR | 1 cut(s) | 2269 |
| AcsI | RAATTY | 2 cut(s) | 1462, 1469 |
| AcuI | CTGAAG | 4 cut(s) | 55, 462, 465, 2442 |
| AfaI | GTAC | 7 cut(s) | 855, 1133, 1173, 1428, 1454, 1582, 2214 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 915, 1176, 1994, 2074, 2267 |
| AflII | CTTAAG | 1 cut(s) | 1744 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1662 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 228, 260, 421, 453 |
| AleI | CACNNNNGTG | 1 cut(s) | 2438 |
| Alw21I | GWGCWC | 1 cut(s) | 1338 |
| Alw26I | GTCTC | 4 cut(s) | 135, 794, 1063, 1117 |
| AlwI | GGATC | 2 cut(s) | 565, 1187 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 488, 2215, 2315 |
| Ama87I | CYCGRG | 1 cut(s) | 1976 |
| AoxI | GGCC | 3 cut(s) | 679, 1230, 2269 |
| ApeKI | GCWGC | 7 cut(s) | 845, 1018, 1933, 2015, 2242, 2353, 2399 |
| ApoI | RAATTY | 2 cut(s) | 1462, 1469 |
| AseI | ATTAAT | 1 cut(s) | 774 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 447, 694, 1113, 2002 |
| AspLEI | GCGC | 4 cut(s) | 478, 895, 1545, 2242 |
| AspS9I | GGNCC | 7 cut(s) | 379, 388, 462, 680, 1230, 1664, 1704 |
| AsuHPI | GGTGA | 1 cut(s) | 2425 |
| AsuII | TTCGAA | 1 cut(s) | 1504 |
| AvaI | CYCGRG | 1 cut(s) | 1976 |
| AvaII | GGWCC | 5 cut(s) | 379, 388, 462, 1664, 1704 |
| AxyI | CCTNAGG | 1 cut(s) | 684 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1572, 1605 |
| BalI | TGGCCA | 1 cut(s) | 2271 |
| BanII | GRGCYC | 1 cut(s) | 234 |
| BauI | CACGAG | 2 cut(s) | 108, 1065 |
| Bbv12I | GWGCWC | 1 cut(s) | 1338 |
| BbvI | GCAGC | 7 cut(s) | 857, 1005, 1945, 2027, 2254, 2340, 2411 |
| BccI | CCATC | 5 cut(s) | 180, 703, 718, 2261, 2438 |
| BceAI | ACGGC | 1 cut(s) | 1154 |
| BciVI | GTATCC | 3 cut(s) | 892, 1561, 2075 |
| BclI | TGATCA | 1 cut(s) | 997 |
| BcoDI | GTCTC | 4 cut(s) | 135, 794, 1063, 1117 |
| BfaI | CTAG | 5 cut(s) | 78, 1779, 1851, 2171, 2469 |
| BfmI | CTRYAG | 7 cut(s) | 523, 843, 876, 924, 945, 1019, 2354 |
| BfrI | CTTAAG | 1 cut(s) | 1744 |
| BfuI | GTATCC | 3 cut(s) | 892, 1561, 2075 |
| BglII | AGATCT | 1 cut(s) | 872 |
| BisI | GCNGC | 7 cut(s) | 846, 1019, 1934, 2016, 2243, 2354, 2400 |
| BlpI | GCTNAGC | 3 cut(s) | 132, 228, 2112 |
| BlsI | GCNGC | 7 cut(s) | 847, 1020, 1935, 2017, 2244, 2355, 2401 |
| BmcAI | AGTACT | 1 cut(s) | 855 |
| Bme18I | GGWCC | 5 cut(s) | 379, 388, 462, 1664, 1704 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1662 |
| BmeT110I | CYCGRG | 1 cut(s) | 1976 |
| BmgT120I | GGNCC | 7 cut(s) | 379, 388, 462, 680, 1230, 1664, 1704 |
| BmiI | GGNNCC | 5 cut(s) | 463, 691, 1231, 1665, 2154 |
| BmrI | ACTGGG | 1 cut(s) | 2331 |
| BmsI | GCATC | 3 cut(s) | 1143, 1773, 1865 |
| BmuI | ACTGGG | 1 cut(s) | 2331 |
| BoxI | GACNNNNGTC | 1 cut(s) | 197 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 132, 164, 368, 400 |
| BpmI | CTGGAG | 3 cut(s) | 870, 2028, 2433 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 132, 228, 2112 |
| Bpu14I | TTCGAA | 1 cut(s) | 1504 |
| BpuEI | CTTGAG | 1 cut(s) | 1141 |
| Bsa29I | ATCGAT | 1 cut(s) | 1151 |
| BsaI | GGTCTC | 1 cut(s) | 794 |
| BsaJI | CCNNGG | 1 cut(s) | 1893 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 915, 1176, 1994, 2074, 2267 |
| Bse1I | ACTGG | 4 cut(s) | 1243, 1707, 2141, 2337 |
| Bse21I | CCTNAGG | 1 cut(s) | 684 |
| Bse3DI | GCAATG | 1 cut(s) | 757 |
| BseCI | ATCGAT | 1 cut(s) | 1151 |
| BseDI | CCNNGG | 1 cut(s) | 1893 |
| BseGI | GGATG | 3 cut(s) | 924, 1378, 1831 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 915, 1176, 1994, 2074, 2267 |
| BseMI | GCAATG | 1 cut(s) | 757 |
| BseNI | ACTGG | 4 cut(s) | 1243, 1707, 2141, 2337 |
| BseRI | GAGGAG | 2 cut(s) | 273, 554 |
| BseXI | GCAGC | 7 cut(s) | 857, 1005, 1945, 2027, 2254, 2340, 2411 |
| BseYI | CCCAGC | 1 cut(s) | 2047 |
| BsgI | GTGCAG | 3 cut(s) | 90, 2418, 2462 |
| Bsh1236I | CGCG | 1 cut(s) | 830 |
| BshFI | GGCC | 3 cut(s) | 681, 1232, 2271 |
| BshVI | ATCGAT | 1 cut(s) | 1151 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1338 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1976 |
| BsiSI | CCGG | 2 cut(s) | 1540, 2040 |
| BslFI | GGGAC | 1 cut(s) | 1842 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 915, 1176, 1994, 2074, 2267 |
| BsmAI | GTCTC | 4 cut(s) | 135, 794, 1063, 1117 |
| BsmBI | CGTCTC | 1 cut(s) | 1117 |
| BsmFI | GGGAC | 1 cut(s) | 1842 |
| BsmI | GAATGC | 2 cut(s) | 1545, 1877 |
| BsnI | GGCC | 3 cut(s) | 681, 1232, 2271 |
| Bso31I | GGTCTC | 1 cut(s) | 794 |
| BsoBI | CYCGRG | 1 cut(s) | 1976 |
| Bsp119I | TTCGAA | 1 cut(s) | 1504 |
| Bsp1286I | GDGCHC | 2 cut(s) | 234, 1338 |
| Bsp1407I | TGTACA | 1 cut(s) | 1131 |
| Bsp143I | GATC | 6 cut(s) | 557, 872, 931, 997, 1179, 1958 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 132, 228, 2112 |
| BspACI | CCGC | 2 cut(s) | 339, 830 |
| BspANI | GGCC | 3 cut(s) | 681, 1232, 2271 |
| BspDI | ATCGAT | 1 cut(s) | 1151 |
| BspFNI | CGCG | 1 cut(s) | 830 |
| BspHI | TCATGA | 3 cut(s) | 286, 837, 2380 |
| BspLI | GGNNCC | 5 cut(s) | 463, 691, 1231, 1665, 2154 |
| BspMAI | CTGCAG | 4 cut(s) | 847, 928, 1023, 2358 |
| BspPI | GGATC | 2 cut(s) | 565, 1187 |
| BspT104I | TTCGAA | 1 cut(s) | 1504 |
| BspTI | CTTAAG | 1 cut(s) | 1744 |
| BspTNI | GGTCTC | 1 cut(s) | 794 |
| BsrDI | GCAATG | 1 cut(s) | 757 |
| BsrGI | TGTACA | 1 cut(s) | 1131 |
| BsrI | ACTGG | 4 cut(s) | 1243, 1707, 2141, 2337 |
| BssECI | CCNNGG | 1 cut(s) | 1893 |
| BssMI | GATC | 6 cut(s) | 557, 872, 931, 997, 1179, 1958 |
| BssSI | CACGAG | 2 cut(s) | 108, 1065 |
| BssT1I | CCWWGG | 1 cut(s) | 1893 |
| Bst2BI | CACGAG | 2 cut(s) | 108, 1065 |
| Bst4CI | ACNGT | 4 cut(s) | 505, 694, 1316, 1585 |
| Bst6I | CTCTTC | 2 cut(s) | 222, 1066 |
| BstAFI | CTTAAG | 1 cut(s) | 1744 |
| BstAUI | TGTACA | 1 cut(s) | 1131 |
| BstBI | TTCGAA | 1 cut(s) | 1504 |
| BstC8I | GCNNGC | 3 cut(s) | 588, 1729, 2118 |
| BstF5I | GGATG | 3 cut(s) | 924, 1378, 1831 |
| BstFNI | CGCG | 1 cut(s) | 830 |
| BstHHI | GCGC | 4 cut(s) | 478, 895, 1545, 2242 |
| BstKTI | GATC | 6 cut(s) | 560, 875, 934, 1000, 1182, 1961 |
| BstMAI | GTCTC | 4 cut(s) | 135, 794, 1063, 1117 |
| BstMBI | GATC | 6 cut(s) | 557, 872, 931, 997, 1179, 1958 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 104, 482, 1409, 2117 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 197 |
| BstSFI | CTRYAG | 7 cut(s) | 523, 843, 876, 924, 945, 1019, 2354 |
| BstUI | CGCG | 1 cut(s) | 830 |
| BstV1I | GCAGC | 7 cut(s) | 857, 1005, 1945, 2027, 2254, 2340, 2411 |
| BstX2I | RGATCY | 1 cut(s) | 872 |
| BstYI | RGATCY | 1 cut(s) | 872 |
| Bsu15I | ATCGAT | 1 cut(s) | 1151 |
| Bsu36I | CCTNAGG | 1 cut(s) | 684 |
| BsuI | GTATCC | 3 cut(s) | 892, 1561, 2075 |
| BsuRI | GGCC | 3 cut(s) | 681, 1232, 2271 |
| BsuTUI | ATCGAT | 1 cut(s) | 1151 |
| BtsCI | GGATG | 3 cut(s) | 924, 1378, 1831 |
| BtsI | GCAGTG | 1 cut(s) | 1028 |
| BtsIMutI | CAGTG | 2 cut(s) | 1028, 1714 |
| Cac8I | GCNNGC | 3 cut(s) | 588, 1729, 2118 |
| CaiI | CAGNNNCTG | 3 cut(s) | 488, 2215, 2315 |
| CciI | TCATGA | 3 cut(s) | 286, 837, 2380 |
| CfoI | GCGC | 4 cut(s) | 478, 895, 1545, 2242 |
| Cfr13I | GGNCC | 7 cut(s) | 379, 388, 462, 680, 1230, 1664, 1704 |
| ClaI | ATCGAT | 1 cut(s) | 1151 |
| CseI | GACGC | 2 cut(s) | 474, 1425 |
| Csp6I | GTAC | 7 cut(s) | 854, 1132, 1172, 1427, 1453, 1581, 2213 |
| CviAII | CATG | 9 cut(s) | 221, 287, 701, 838, 1135, 1210, 1330, 1564, 2381 |
| CviQI | GTAC | 7 cut(s) | 854, 1132, 1172, 1427, 1453, 1581, 2213 |
| DpnI | GATC | 6 cut(s) | 559, 874, 933, 999, 1181, 1960 |
| DpnII | GATC | 6 cut(s) | 557, 872, 931, 997, 1179, 1958 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1662 |
| EaeI | YGGCCR | 1 cut(s) | 2269 |
| Eam1104I | CTCTTC | 2 cut(s) | 222, 1066 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1662 |
| EarI | CTCTTC | 2 cut(s) | 222, 1066 |
| EciI | GGCGGA | 1 cut(s) | 328 |
| Eco130I | CCWWGG | 1 cut(s) | 1893 |
| Eco24I | GRGCYC | 1 cut(s) | 234 |
| Eco31I | GGTCTC | 1 cut(s) | 794 |
| Eco47I | GGWCC | 5 cut(s) | 379, 388, 462, 1664, 1704 |
| Eco57I | CTGAAG | 4 cut(s) | 55, 462, 465, 2442 |
| Eco81I | CCTNAGG | 1 cut(s) | 684 |
| Eco88I | CYCGRG | 1 cut(s) | 1976 |
| EcoO109I | RGGNCCY | 2 cut(s) | 379, 462 |
| EcoT14I | CCWWGG | 1 cut(s) | 1893 |
| EcoT22I | ATGCAT | 1 cut(s) | 1158 |
| EcoT38I | GRGCYC | 1 cut(s) | 234 |
| ErhI | CCWWGG | 1 cut(s) | 1893 |
| Esp3I | CGTCTC | 1 cut(s) | 1117 |
| FaeI | CATG | 9 cut(s) | 224, 290, 704, 841, 1138, 1213, 1333, 1567, 2384 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 228, 260, 1185, 1217, 1198, 1230 |
| FaqI | GGGAC | 1 cut(s) | 1842 |
| FatI | CATG | 9 cut(s) | 220, 286, 700, 837, 1134, 1209, 1329, 1563, 2380 |
| FbaI | TGATCA | 1 cut(s) | 997 |
| Fnu4HI | GCNGC | 7 cut(s) | 846, 1019, 1934, 2016, 2243, 2354, 2400 |
| FokI | GGATG | 3 cut(s) | 931, 1385, 1818 |
| FriOI | GRGCYC | 1 cut(s) | 234 |
| Fsp4HI | GCNGC | 7 cut(s) | 846, 1019, 1934, 2016, 2243, 2354, 2400 |
| FspBI | CTAG | 5 cut(s) | 78, 1779, 1851, 2171, 2469 |
| GlaI | GCGC | 4 cut(s) | 477, 894, 1544, 2241 |
| GluI | GCNGC | 7 cut(s) | 846, 1019, 1934, 2016, 2243, 2354, 2400 |
| GsaI | CCCAGC | 1 cut(s) | 2051 |
| GsuI | CTGGAG | 3 cut(s) | 870, 2028, 2433 |
| HaeIII | GGCC | 3 cut(s) | 681, 1232, 2271 |
| HapII | CCGG | 2 cut(s) | 1540, 2040 |
| HgaI | GACGC | 2 cut(s) | 474, 1425 |
| HhaI | GCGC | 4 cut(s) | 478, 895, 1545, 2242 |
| Hin1II | CATG | 9 cut(s) | 224, 290, 704, 841, 1138, 1213, 1333, 1567, 2384 |
| Hin6I | GCGC | 4 cut(s) | 476, 893, 1543, 2240 |
| HinP1I | GCGC | 4 cut(s) | 476, 893, 1543, 2240 |
| HincII | GTYRAC | 4 cut(s) | 1104, 1319, 1651, 2203 |
| HindII | GTYRAC | 4 cut(s) | 1104, 1319, 1651, 2203 |
| HindIII | AAGCTT | 2 cut(s) | 123, 242 |
| HpaII | CCGG | 2 cut(s) | 1540, 2040 |
| HphI | GGTGA | 1 cut(s) | 2425 |
| Hpy166II | GTNNAC | 6 cut(s) | 569, 1104, 1319, 1553, 1651, 2203 |
| Hpy188I | TCNGA | 8 cut(s) | 388, 442, 490, 936, 1769, 1903, 2152, 2317 |
| Hpy8I | GTNNAC | 6 cut(s) | 569, 1104, 1319, 1553, 1651, 2203 |
| Hpy99I | CGWCG | 1 cut(s) | 1441 |
| HpyAV | CCTTC | 4 cut(s) | 357, 437, 489, 1132 |
| HpyCH4III | ACNGT | 4 cut(s) | 505, 694, 1316, 1585 |
| HpyCH4IV | ACGT | 2 cut(s) | 1126, 1321 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 104, 482, 1409, 2117 |
| HpySE526I | ACGT | 2 cut(s) | 1126, 1321 |
| Hsp92II | CATG | 9 cut(s) | 224, 290, 704, 841, 1138, 1213, 1333, 1567, 2384 |
| HspAI | GCGC | 4 cut(s) | 476, 893, 1543, 2240 |
| Ksp22I | TGATCA | 1 cut(s) | 997 |
| Kzo9I | GATC | 6 cut(s) | 557, 872, 931, 997, 1179, 1958 |
| LmnI | GCTCC | 3 cut(s) | 1333, 1930, 2152 |
| Lsp1109I | GCAGC | 7 cut(s) | 857, 1005, 1945, 2027, 2254, 2340, 2411 |
| LweI | GCATC | 3 cut(s) | 1143, 1773, 1865 |
| MaeI | CTAG | 5 cut(s) | 78, 1779, 1851, 2171, 2469 |
| MaeII | ACGT | 2 cut(s) | 1126, 1321 |
| MaeIII | GTNAC | 4 cut(s) | 634, 1067, 1444, 2323 |
| MalI | GATC | 6 cut(s) | 559, 874, 933, 999, 1181, 1960 |
| MboI | GATC | 6 cut(s) | 557, 872, 931, 997, 1179, 1958 |
| MfeI | CAATTG | 1 cut(s) | 1487 |
| MflI | RGATCY | 1 cut(s) | 872 |
| MhlI | GDGCHC | 2 cut(s) | 234, 1338 |
| MlsI | TGGCCA | 1 cut(s) | 2271 |
| MluNI | TGGCCA | 1 cut(s) | 2271 |
| MmeI | TCCRAC | 4 cut(s) | 175, 293, 1781, 2130 |
| Mox20I | TGGCCA | 1 cut(s) | 2271 |
| Mph1103I | ATGCAT | 1 cut(s) | 1158 |
| MroXI | GAANNNNTTC | 4 cut(s) | 447, 694, 1113, 2002 |
| MscI | TGGCCA | 1 cut(s) | 2271 |
| MseI | TTAA | 8 cut(s) | 774, 959, 989, 1218, 1473, 1745, 1925, 2459 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1836, 2438 |
| Msp20I | TGGCCA | 1 cut(s) | 2271 |
| MspA1I | CMGCKG | 3 cut(s) | 371, 848, 2018 |
| MspCI | CTTAAG | 1 cut(s) | 1744 |
| MspI | CCGG | 2 cut(s) | 1540, 2040 |
| MunI | CAATTG | 1 cut(s) | 1487 |
| Mva1269I | GAATGC | 2 cut(s) | 1545, 1877 |
| MvnI | CGCG | 1 cut(s) | 830 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 104, 482, 1409, 2117 |
| NdeII | GATC | 6 cut(s) | 557, 872, 931, 997, 1179, 1958 |
| NlaIII | CATG | 9 cut(s) | 224, 290, 704, 841, 1138, 1213, 1333, 1567, 2384 |
| NlaIV | GGNNCC | 5 cut(s) | 463, 691, 1231, 1665, 2154 |
| NmuCI | GTSAC | 2 cut(s) | 1067, 1444 |
| NsiI | ATGCAT | 1 cut(s) | 1158 |
| NspV | TTCGAA | 1 cut(s) | 1504 |
| OliI | CACNNNNGTG | 1 cut(s) | 2438 |
| PagI | TCATGA | 3 cut(s) | 286, 837, 2380 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1445 |
| PctI | GAATGC | 2 cut(s) | 1545, 1877 |
| PdmI | GAANNNNTTC | 4 cut(s) | 447, 694, 1113, 2002 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2074 |
| PkrI | GCNGC | 7 cut(s) | 847, 1020, 1935, 2017, 2244, 2355, 2401 |
| PpuMI | RGGWCCY | 2 cut(s) | 379, 462 |
| PshAI | GACNNNNGTC | 1 cut(s) | 197 |
| PshBI | ATTAAT | 1 cut(s) | 774 |
| Psp5II | RGGWCCY | 2 cut(s) | 379, 462 |
| PspFI | CCCAGC | 1 cut(s) | 2047 |
| PspN4I | GGNNCC | 5 cut(s) | 463, 691, 1231, 1665, 2154 |
| PspPI | GGNCC | 7 cut(s) | 379, 388, 462, 680, 1230, 1664, 1704 |
| PspPPI | RGGWCCY | 2 cut(s) | 379, 462 |
| PstI | CTGCAG | 4 cut(s) | 847, 928, 1023, 2358 |
| PstNI | CAGNNNCTG | 3 cut(s) | 488, 2215, 2315 |
| PsuI | RGATCY | 1 cut(s) | 872 |
| PvuII | CAGCTG | 3 cut(s) | 371, 848, 2018 |
| RsaI | GTAC | 7 cut(s) | 855, 1133, 1173, 1428, 1454, 1582, 2214 |
| RsaNI | GTAC | 7 cut(s) | 854, 1132, 1172, 1427, 1453, 1581, 2213 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1836, 2438 |
| SaqAI | TTAA | 8 cut(s) | 774, 959, 989, 1218, 1473, 1745, 1925, 2459 |
| SatI | GCNGC | 7 cut(s) | 846, 1019, 1934, 2016, 2243, 2354, 2400 |
| Sau3AI | GATC | 6 cut(s) | 557, 872, 931, 997, 1179, 1958 |
| Sau96I | GGNCC | 7 cut(s) | 379, 388, 462, 680, 1230, 1664, 1704 |
| ScaI | AGTACT | 1 cut(s) | 855 |
| SduI | GDGCHC | 2 cut(s) | 234, 1338 |
| SfaNI | GCATC | 3 cut(s) | 1143, 1773, 1865 |
| SfcI | CTRYAG | 7 cut(s) | 523, 843, 876, 924, 945, 1019, 2354 |
| SfuI | TTCGAA | 1 cut(s) | 1504 |
| SinI | GGWCC | 5 cut(s) | 379, 388, 462, 1664, 1704 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1836, 2438 |
| SmlI | CTYRAG | 2 cut(s) | 1120, 1744 |
| SmoI | CTYRAG | 2 cut(s) | 1120, 1744 |
| SsiI | CCGC | 2 cut(s) | 339, 830 |
| SspI | AATATT | 1 cut(s) | 1113 |
| SspMI | CTAG | 5 cut(s) | 78, 1779, 1851, 2171, 2469 |
| StyI | CCWWGG | 1 cut(s) | 1893 |
| TaaI | ACNGT | 4 cut(s) | 505, 694, 1316, 1585 |
| TaiI | ACGT | 2 cut(s) | 1129, 1324 |
| TaqI | TCGA | 7 cut(s) | 497, 1045, 1151, 1504, 1576, 2026, 2482 |
| TatI | WGTACW | 4 cut(s) | 853, 1131, 1426, 1452 |
| Tru1I | TTAA | 8 cut(s) | 774, 959, 989, 1218, 1473, 1745, 1925, 2459 |
| Tru9I | TTAA | 8 cut(s) | 774, 959, 989, 1218, 1473, 1745, 1925, 2459 |
| TscAI | CASTG | 2 cut(s) | 1028, 1714 |
| TseFI | GTSAC | 2 cut(s) | 1067, 1444 |
| TseI | GCWGC | 7 cut(s) | 845, 1018, 1933, 2015, 2242, 2353, 2399 |
| Tsp45I | GTSAC | 2 cut(s) | 1067, 1444 |
| TspGWI | ACGGA | 1 cut(s) | 1699 |
| TspRI | CASTG | 2 cut(s) | 1028, 1714 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2074 |
| Vha464I | CTTAAG | 1 cut(s) | 1744 |
| VpaK11BI | GGWCC | 5 cut(s) | 379, 388, 462, 1664, 1704 |
| VspI | ATTAAT | 1 cut(s) | 774 |
| XapI | RAATTY | 2 cut(s) | 1462, 1469 |
| XbaI | TCTAGA | 1 cut(s) | 77 |
| XmnI | GAANNNNTTC | 4 cut(s) | 447, 694, 1113, 2002 |
| XspI | CTAG | 5 cut(s) | 78, 1779, 1851, 2171, 2469 |
| ZrmI | AGTACT | 1 cut(s) | 855 |
| Zsp2I | ATGCAT | 1 cut(s) | 1158 |