Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0003905

Physical Location & Seq

Genomic Coordinates Forward (+)

50466478 .. 50473453

Gene Structure 6976 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1403800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGAAGGTGCCATTGGTGAGGACGAAGGTGTTAATTCGGCACTTGCCTCCGTCTCTGTCTCAGTCCGATCTCTTCCACCAAATCGACCACCTGCTCGCCGACCGCTACAACTGGCTCTGCTTCCGTCCAGGAAAGAATAGCCAGAAGAACCAGAGGTATTCTCGGGCCTACATAGATTTCAAGCGACCTGAAGATGTTTTTGAGTTTGCTGAATTCTTTGATGGACACGTGTTTGTCAATGAGAAGGGGGCTCAATTCAAGGCTATAGTTGAATATGCACCCTCACAGCGTGTTCCAAAACCTAGTACGAAAAAGGATGGCCGTGAAGGGACAATATATAAAGATCCTGATTATTTGGAGTTCCTCAAACTTATTGCAAAGCCTGTCGAGCATCTTCCTAGTGCAGAAATACAGCTGGAGAGAAAGGAAGCAGAACAAGCTGGTGGTGCAAAAGAAGCTCCTATTGTTACACCCCTCATGGAGTATGTTCGTCAGAAACGAGCTATTGGAAGTGGTACTCAGGTTTCATCCGTTGTTCGGAAGGTTAGAAGAAGAGTCAGGGCTGCCTCTGTTAGCAAACGTGGCTCACCTTCTACAAAACGGGTCTCTGAGAAGAAAAAGTACATAATAAAGGACGGTACTAAACACACAAGTCGAAGGGACAAATCCACTTTCAATGTGGTACCCAGGCGAGAGGATCAGTTGGCTCGTTCAAGTGGAAAAGAAACATTAGAAAATGAAATTGGTTCTGTTTCAGGAATCCCTGTGATTTCTGACTCTGGAAAGAAGAAAATCTTACTTATTAAAGGAAAAGAGCGTGAAATATCTCCTGTTGAAGGTATGTCACAACTTGGAAGTTCTCCTATTTCACATGCTCCGAAGCAGAACCAAAGGCGTGAGGCTAGTGGAAGAATGATCAGAAGCATACTTTTAAATAATGAGGGACGCCAAAGTCAAACTTCAACTGAAACTCAGCCTCAGCAGAAAATTCAAAGTCTGAACTCAGATGTTAAGCGAGTATCTCGGCCTTCCAATGCAAGGTCAGGGTTGAATGGTGACATCTCTACTAATGAACTTAACTCAATGAGCTCTGAAGGGGATAGAAAGAGGGCAACAGCTGATAGATTTACAAAAAAGGACGTGCATGGTACAACTAGTGTTAGTGAGAGGCAGGAAAAAAATACACGAAACAAGGATAGACCTGATCGTGGTGTTTGGGCTCCTCTTCATCGTGCTGATAGTTCACATGCTAGTGCTGAGCATTTGCCATCCTCCGGGTTACAACGCCCTCAAGTAATATCTGATTCCTTTGAAGGTCATGGAAAAGGGAAGGACGACTCTTCTTATGGAAGCAGGACTGGGGAAGTTATAAATCCTACAAGTGGACGTAATAGTTCTCATGTAGAGAATGGTTCACATAGACATTTTGGTCGCCATGGAAGTGCCCATAATATGAAAGATGACAGTTCTGTAAATGTAGGTGAGGGGAAGCCATCTAAAAGAGGTGCTTCTGTTCATGGTACCCCTGAGTTAGAATATTTCGCTGTTCGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000184 GO:0000956 GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009751 GO:0009753 GO:0009755 GO:0009863 GO:0009867 GO:0009892 GO:0009987 GO:0010033 GO:0010468 GO:0010605 GO:0010629 GO:0014070 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0023052 GO:0031974 GO:0031981 GO:0032870 GO:0034641 GO:0034655 GO:0035690 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046677 GO:0046700 GO:0048519 GO:0048571 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 map03013 map03015

Pfam Domains

Protein Families

Smg4_UPF3

Protein Analysis

518

Amino Acids

57.71

Weight (kDa)

10.02

Isoelectric Point (pI)

47.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Smg4_UPF3	PF03467	7 - 168	1.1e-54	Smg-4/UPF3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0003905)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33980 AT1G33980
fragaria_vesca	FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510
malus_domestica	MD08G1216600.v1.1 MD15G1403800.v1.1
prunus_persica	Prupe.1G550000_v2.0.a1
pyrus_communis	pycom08g18750 pycom15g36110
rosa_chinensis	RchiOBHm_Chr6g0271031 RchiOBHm_Chr7g0229091
rosa_laevigata	RLG00000001531
rosa_multiflora	Rmu_sc0000271.1_g000018
rosa_roxburghii	Rroxscaffold_3G00230720
rosa_rugosa	Rorug07G0255600 Rorug07G0255700 Rorug07G0255700 Rorug07G0255800 Rorug07G0255900 Rorug07G0256000
rosa_samantha	Rh7AG406900 Rh7BG386300 Rh7CG424600 Rh7DG400900
rosa_wichuraiana	Rw7G033780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1370
AarI	CACCTGC	1 cut(s)	99
AasI	GACNNNNNNGTC	2 cut(s)	951, 1428
Acc36I	ACCTGC	1 cut(s)	99
Acc65I	GGTACC	2 cut(s)	682, 1520
AccB1I	GGYRCC	3 cut(s)	7, 682, 1520
AciI	CCGC	1 cut(s)	103
AclWI	GGATC	2 cut(s)	338, 705
AcoI	YGGCCR	1 cut(s)	319
AcsI	RAATTY	2 cut(s)	212, 987
AcuI	CTGAAG	2 cut(s)	210, 1113
AcvI	CACGTG	1 cut(s)	229
AcyI	GRCGYC	1 cut(s)	946
AdeI	CACNNNGTG	1 cut(s)	290
AfaI	GTAC	7 cut(s)	307, 517, 623, 640, 684, 1150, 1522
AfiI	CCNNNNNNNGG	6 cut(s)	537, 836, 1038, 1208, 1274, 1382
AflIII	ACRYGT	2 cut(s)	226, 228
AhlI	ACTAGT	1 cut(s)	1154
AjiI	CACGTC	1 cut(s)	1141
AjnI	CCWGG	2 cut(s)	127, 686
AjuI	GAANNNNNNNTTGG	3 cut(s)	28, 726, 758
AluBI	AGCT	6 cut(s)	415, 440, 458, 503, 1089, 1118
AluI	AGCT	6 cut(s)	415, 440, 458, 503, 1089, 1118
Alw21I	GWGCWC	1 cut(s)	1091
Alw26I	GTCTC	3 cut(s)	57, 63, 610
AlwI	GGATC	2 cut(s)	338, 705
Ama87I	CYCGRG	1 cut(s)	162
AoxI	GGCC	3 cut(s)	165, 319, 1025
ApeKI	GCWGC	1 cut(s)	563
ApoI	RAATTY	2 cut(s)	212, 987
Asp718I	GGTACC	2 cut(s)	682, 1520
AspS9I	GGNCC	1 cut(s)	165
AsuC2I	CCSGG	1 cut(s)	1276
AsuHPI	GGTGA	4 cut(s)	28, 579, 1067, 1493
AvaI	CYCGRG	1 cut(s)	162
BaeGI	GKGCMC	1 cut(s)	1447
BaeI	ACNNNNGTAYC	2 cut(s)	507, 540
BanI	GGYRCC	3 cut(s)	7, 682, 1520
BanII	GRGCYC	3 cut(s)	253, 1091, 1222
BarI	GAAGNNNNNNTAC	2 cut(s)	605, 637
BbrPI	CACGTG	1 cut(s)	229
Bbv12I	GWGCWC	1 cut(s)	1091
BbvCI	CCTCAGC	1 cut(s)	978
BbvI	GCAGC	1 cut(s)	550
BccI	CCATC	4 cut(s)	215, 311, 1276, 1501
BceAI	ACGGC	1 cut(s)	306
BciT130I	CCWGG	2 cut(s)	129, 688
BclI	TGATCA	1 cut(s)	915
BcnI	CCSGG	1 cut(s)	1276
BcoDI	GTCTC	3 cut(s)	57, 63, 610
BcuI	ACTAGT	1 cut(s)	1154
BfaI	CTAG	6 cut(s)	303, 399, 903, 1155, 1251, 1552
BfmI	CTRYAG	1 cut(s)	264
BfuAI	ACCTGC	1 cut(s)	99
BisI	GCNGC	1 cut(s)	564
BlpI	GCTNAGC	1 cut(s)	1257
BlsI	GCNGC	1 cut(s)	565
Bme1390I	CCNGG	3 cut(s)	129, 688, 1276
BmeT110I	CYCGRG	1 cut(s)	162
BmgBI	CACGTC	1 cut(s)	1141
BmgT120I	GGNCC	1 cut(s)	165
BmiI	GGNNCC	4 cut(s)	9, 684, 1221, 1522
BmrFI	CCNGG	3 cut(s)	129, 688, 1276
BmrI	ACTGGG	1 cut(s)	1368
BmsI	GCATC	1 cut(s)	400
BmuI	ACTGGG	1 cut(s)	1368
BplI	GAGNNNNNCTC	2 cut(s)	145, 177
BpmI	CTGGAG	1 cut(s)	437
Bpu10I	CCTNAGC	1 cut(s)	978
Bpu1102I	GCTNAGC	1 cut(s)	1257
BpuEI	CTTGAG	1 cut(s)	1275
BpuMI	CCSGG	1 cut(s)	1276
BsaAI	YACGTR	1 cut(s)	229
BsaHI	GRCGYC	1 cut(s)	946
BsaI	GGTCTC	1 cut(s)	610
BsaJI	CCNNGG	2 cut(s)	686, 1435
Bsc4I	CCNNNNNNNGG	6 cut(s)	537, 836, 1038, 1208, 1274, 1382
Bse1I	ACTGG	2 cut(s)	116, 1363
BseBI	CCWGG	2 cut(s)	129, 688
BseDI	CCNNGG	2 cut(s)	686, 1435
BseGI	GGATG	3 cut(s)	322, 527, 1268
BseLI	CCNNNNNNNGG	6 cut(s)	537, 836, 1038, 1208, 1274, 1382
BseMII	CTCAG	8 cut(s)	74, 533, 600, 986, 992, 1017, 1248, 1518
BseNI	ACTGG	2 cut(s)	116, 1363
BseRI	GAGGAG	1 cut(s)	1212
BseSI	GKGCMC	1 cut(s)	1447
BseXI	GCAGC	1 cut(s)	550
BsgI	GTGCAG	1 cut(s)	423
Bsh1285I	CGRYCG	1 cut(s)	103
BshFI	GGCC	3 cut(s)	167, 321, 1027
BshNI	GGYRCC	3 cut(s)	7, 682, 1520
BsiEI	CGRYCG	1 cut(s)	103
BsiHKAI	GWGCWC	1 cut(s)	1091
BsiHKCI	CYCGRG	1 cut(s)	162
BsiSI	CCGG	1 cut(s)	1275
BslFI	GGGAC	3 cut(s)	343, 674, 957
BslI	CCNNNNNNNGG	6 cut(s)	537, 836, 1038, 1208, 1274, 1382
BsmAI	GTCTC	3 cut(s)	57, 63, 610
BsmBI	CGTCTC	1 cut(s)	57
BsmFI	GGGAC	3 cut(s)	343, 674, 957
BsnI	GGCC	3 cut(s)	167, 321, 1027
Bso31I	GGTCTC	1 cut(s)	610
BsoBI	CYCGRG	1 cut(s)	162
Bsp1286I	GDGCHC	4 cut(s)	253, 1091, 1222, 1447
Bsp143I	GATC	5 cut(s)	67, 343, 697, 915, 1204
Bsp1720I	GCTNAGC	1 cut(s)	1257
Bsp19I	CCATGG	1 cut(s)	1435
BspACI	CCGC	1 cut(s)	103
BspANI	GGCC	3 cut(s)	167, 321, 1027
BspCNI	CTCAG	8 cut(s)	73, 532, 601, 985, 991, 1016, 1249, 1519
BspLI	GGNNCC	4 cut(s)	9, 684, 1221, 1522
BspMI	ACCTGC	1 cut(s)	99
BspPI	GGATC	2 cut(s)	338, 705
BspT107I	GGYRCC	3 cut(s)	7, 682, 1520
BspTNI	GGTCTC	1 cut(s)	610
BsrI	ACTGG	2 cut(s)	116, 1363
BssECI	CCNNGG	2 cut(s)	686, 1435
BssMI	GATC	5 cut(s)	67, 343, 697, 915, 1204
BssNI	GRCGYC	1 cut(s)	946
BssT1I	CCWWGG	1 cut(s)	1435
Bst2UI	CCWGG	2 cut(s)	129, 688
Bst4CI	ACNGT	2 cut(s)	638, 1466
Bst6I	CTCTTC	4 cut(s)	77, 547, 1230, 1345
BstACI	GRCGYC	1 cut(s)	946
BstBAI	YACGTR	1 cut(s)	229
BstC8I	GCNNGC	1 cut(s)	96
BstDEI	CTNAG	8 cut(s)	60, 519, 609, 972, 978, 1003, 1257, 1527
BstDSI	CCRYGG	1 cut(s)	1435
BstENI	CCTNNNNNAGG	1 cut(s)	834
BstF5I	GGATG	3 cut(s)	322, 527, 1268
BstKTI	GATC	5 cut(s)	70, 346, 700, 918, 1207
BstMAI	GTCTC	3 cut(s)	57, 63, 610
BstMBI	GATC	5 cut(s)	67, 343, 697, 915, 1204
BstMCI	CGRYCG	1 cut(s)	103
BstMWI	GCNNNNNNNGC	5 cut(s)	388, 437, 446, 455, 582
BstNI	CCWGG	2 cut(s)	129, 688
BstNSI	RCATGY	2 cut(s)	875, 1250
BstSCI	CCNGG	3 cut(s)	127, 686, 1274
BstSFI	CTRYAG	1 cut(s)	264
BstSLI	GKGCMC	1 cut(s)	1447
BstV1I	GCAGC	1 cut(s)	550
BstX2I	RGATCY	1 cut(s)	343
BstYI	RGATCY	1 cut(s)	343
BsuRI	GGCC	3 cut(s)	167, 321, 1027
BtgI	CCRYGG	1 cut(s)	1435
BtrI	CACGTC	1 cut(s)	1141
BtsCI	GGATG	3 cut(s)	322, 527, 1268
BveI	ACCTGC	1 cut(s)	99
Cac8I	GCNNGC	1 cut(s)	96
Cfr13I	GGNCC	1 cut(s)	165
CseI	GACGC	1 cut(s)	954
Csp6I	GTAC	7 cut(s)	306, 516, 622, 639, 683, 1149, 1521
CviAII	CATG	8 cut(s)	478, 872, 1145, 1247, 1319, 1400, 1436, 1517
CviQI	GTAC	7 cut(s)	306, 516, 622, 639, 683, 1149, 1521
DdeI	CTNAG	8 cut(s)	60, 519, 609, 972, 978, 1003, 1257, 1527
DpnI	GATC	5 cut(s)	69, 345, 699, 917, 1206
DpnII	GATC	5 cut(s)	67, 343, 697, 915, 1204
DraI	TTTAAA	1 cut(s)	933
DraIII	CACNNNGTG	1 cut(s)	290
DrdI	GACNNNNNNGTC	2 cut(s)	951, 1428
DseDI	GACNNNNNNGTC	2 cut(s)	951, 1428
EaeI	YGGCCR	1 cut(s)	319
Eam1104I	CTCTTC	4 cut(s)	77, 547, 1230, 1345
EarI	CTCTTC	4 cut(s)	77, 547, 1230, 1345
Ecl136II	GAGCTC	1 cut(s)	1089
Eco130I	CCWWGG	1 cut(s)	1435
Eco24I	GRGCYC	3 cut(s)	253, 1091, 1222
Eco31I	GGTCTC	1 cut(s)	610
Eco53kI	GAGCTC	1 cut(s)	1089
Eco57I	CTGAAG	2 cut(s)	210, 1113
Eco72I	CACGTG	1 cut(s)	229
Eco88I	CYCGRG	1 cut(s)	162
EcoICRI	GAGCTC	1 cut(s)	1089
EcoNI	CCTNNNNNAGG	1 cut(s)	834
EcoRI	GAATTC	1 cut(s)	212
EcoRII	CCWGG	2 cut(s)	127, 686
EcoT14I	CCWWGG	1 cut(s)	1435
EcoT38I	GRGCYC	3 cut(s)	253, 1091, 1222
ErhI	CCWWGG	1 cut(s)	1435
Esp3I	CGTCTC	1 cut(s)	57
FaeI	CATG	8 cut(s)	481, 875, 1148, 1250, 1322, 1403, 1439, 1520
FalI	AAGNNNNNCTT	6 cut(s)	779, 811, 943, 975, 1492, 1524
FaqI	GGGAC	3 cut(s)	343, 674, 957
FatI	CATG	8 cut(s)	477, 871, 1144, 1246, 1318, 1399, 1435, 1516
FbaI	TGATCA	1 cut(s)	915
Fnu4HI	GCNGC	1 cut(s)	564
FokI	GGATG	3 cut(s)	329, 514, 1255
FriOI	GRGCYC	3 cut(s)	253, 1091, 1222
Fsp4HI	GCNGC	1 cut(s)	564
FspBI	CTAG	6 cut(s)	303, 399, 903, 1155, 1251, 1552
GluI	GCNGC	1 cut(s)	564
GsuI	CTGGAG	1 cut(s)	437
HaeIII	GGCC	3 cut(s)	167, 321, 1027
HapII	CCGG	1 cut(s)	1275
HgaI	GACGC	1 cut(s)	954
Hin1I	GRCGYC	1 cut(s)	946
Hin1II	CATG	8 cut(s)	481, 875, 1148, 1250, 1322, 1403, 1439, 1520
HinfI	GANTC	5 cut(s)	555, 759, 776, 1304, 1337
HpaII	CCGG	1 cut(s)	1275
HphI	GGTGA	4 cut(s)	28, 579, 1067, 1493
Hpy166II	GTNNAC	3 cut(s)	1244, 1385, 1415
Hpy188III	TCNNGA	3 cut(s)	347, 756, 780
Hpy8I	GTNNAC	3 cut(s)	1244, 1385, 1415
HpyCH4III	ACNGT	2 cut(s)	638, 1466
HpyCH4IV	ACGT	4 cut(s)	228, 580, 1140, 1387
HpyCH4V	TGCA	6 cut(s)	278, 377, 404, 449, 1037, 1144
HpyF10VI	GCNNNNNNNGC	5 cut(s)	388, 437, 446, 455, 582
HpyF3I	CTNAG	8 cut(s)	60, 519, 609, 972, 978, 1003, 1257, 1527
HpySE526I	ACGT	4 cut(s)	228, 580, 1140, 1387
Hsp92I	GRCGYC	1 cut(s)	946
Hsp92II	CATG	8 cut(s)	481, 875, 1148, 1250, 1322, 1403, 1439, 1520
KpnI	GGTACC	2 cut(s)	686, 1524
Ksp22I	TGATCA	1 cut(s)	915
Kzo9I	GATC	5 cut(s)	67, 343, 697, 915, 1204
LmnI	GCTCC	3 cut(s)	463, 880, 1225
Lsp1109I	GCAGC	1 cut(s)	550
LweI	GCATC	1 cut(s)	400
MaeI	CTAG	6 cut(s)	303, 399, 903, 1155, 1251, 1552
MaeII	ACGT	4 cut(s)	228, 580, 1140, 1387
MaeIII	GTNAC	4 cut(s)	466, 843, 1055, 1278
MalI	GATC	5 cut(s)	69, 345, 699, 917, 1206
MboI	GATC	5 cut(s)	67, 343, 697, 915, 1204
MflI	RGATCY	1 cut(s)	343
MhlI	GDGCHC	4 cut(s)	253, 1091, 1222, 1447
MluCI	AATT	5 cut(s)	33, 212, 254, 741, 987
MlyI	GAGTC	3 cut(s)	564, 770, 1331
MseI	TTAA	5 cut(s)	32, 804, 932, 1011, 1077
MslI	CAYNNNNRTG	2 cut(s)	1251, 1440
MspA1I	CMGCKG	2 cut(s)	415, 1118
MspI	CCGG	1 cut(s)	1275
MspR9I	CCNGG	3 cut(s)	129, 688, 1276
MvaI	CCWGG	2 cut(s)	129, 688
MwoI	GCNNNNNNNGC	5 cut(s)	388, 437, 446, 455, 582
NciI	CCSGG	1 cut(s)	1276
NcoI	CCATGG	1 cut(s)	1435
NdeII	GATC	5 cut(s)	67, 343, 697, 915, 1204
NlaIII	CATG	8 cut(s)	481, 875, 1148, 1250, 1322, 1403, 1439, 1520
NlaIV	GGNNCC	4 cut(s)	9, 684, 1221, 1522
NmeAIII	GCCGAG	1 cut(s)	1003
NmuCI	GTSAC	2 cut(s)	843, 1055
NspI	RCATGY	2 cut(s)	875, 1250
PaqCI	CACCTGC	1 cut(s)	99
PcsI	WCGNNNNNNNCGW	1 cut(s)	496
PfeI	GAWTC	2 cut(s)	759, 1304
PfoI	TCCNGGA	1 cut(s)	127
PkrI	GCNGC	1 cut(s)	565
PleI	GAGTC	3 cut(s)	563, 770, 1331
PmaCI	CACGTG	1 cut(s)	229
PmlI	CACGTG	1 cut(s)	229
PpsI	GAGTC	3 cut(s)	563, 770, 1331
Ppu21I	YACGTR	1 cut(s)	229
PsiI	TTATAA	1 cut(s)	1370
Psp124BI	GAGCTC	1 cut(s)	1091
Psp6I	CCWGG	2 cut(s)	127, 686
PspCI	CACGTG	1 cut(s)	229
PspGI	CCWGG	2 cut(s)	127, 686
PspN4I	GGNNCC	4 cut(s)	9, 684, 1221, 1522
PspPI	GGNCC	1 cut(s)	165
PsuI	RGATCY	1 cut(s)	343
PvuII	CAGCTG	2 cut(s)	415, 1118
RsaI	GTAC	7 cut(s)	307, 517, 623, 640, 684, 1150, 1522
RsaNI	GTAC	7 cut(s)	306, 516, 622, 639, 683, 1149, 1521
RseI	CAYNNNNRTG	2 cut(s)	1251, 1440
SacI	GAGCTC	1 cut(s)	1091
SaqAI	TTAA	5 cut(s)	32, 804, 932, 1011, 1077
SatI	GCNGC	1 cut(s)	564
Sau3AI	GATC	5 cut(s)	67, 343, 697, 915, 1204
Sau96I	GGNCC	1 cut(s)	165
SchI	GAGTC	3 cut(s)	564, 770, 1331
ScrFI	CCNGG	3 cut(s)	129, 688, 1276
SduI	GDGCHC	4 cut(s)	253, 1091, 1222, 1447
SfaNI	GCATC	1 cut(s)	400
SfcI	CTRYAG	1 cut(s)	264
SmiMI	CAYNNNNRTG	2 cut(s)	1251, 1440
SmlI	CTYRAG	1 cut(s)	1290
SmoI	CTYRAG	1 cut(s)	1290
SpeI	ACTAGT	1 cut(s)	1154
Sse9I	AATT	5 cut(s)	33, 212, 254, 741, 987
SsiI	CCGC	1 cut(s)	103
SspI	AATATT	1 cut(s)	1538
SspMI	CTAG	6 cut(s)	303, 399, 903, 1155, 1251, 1552
SstI	GAGCTC	1 cut(s)	1091
StyD4I	CCNGG	3 cut(s)	127, 686, 1274
StyI	CCWWGG	1 cut(s)	1435
TaaI	ACNGT	2 cut(s)	638, 1466
TaiI	ACGT	4 cut(s)	231, 583, 1143, 1390
TaqI	TCGA	3 cut(s)	84, 387, 655
TasI	AATT	5 cut(s)	33, 212, 254, 741, 987
TatI	WGTACW	1 cut(s)	621
TfiI	GAWTC	2 cut(s)	759, 1304
Tru1I	TTAA	5 cut(s)	32, 804, 932, 1011, 1077
Tru9I	TTAA	5 cut(s)	32, 804, 932, 1011, 1077
TseFI	GTSAC	2 cut(s)	843, 1055
TseI	GCWGC	1 cut(s)	563
Tsp45I	GTSAC	2 cut(s)	843, 1055
TspDTI	ATGAA	7 cut(s)	17, 516, 753, 1086, 1217, 1469, 1505
TspGWI	ACGGA	3 cut(s)	39, 113, 520
XagI	CCTNNNNNAGG	1 cut(s)	834
XapI	RAATTY	2 cut(s)	212, 987
XceI	RCATGY	2 cut(s)	875, 1250
XcmI	CCANNNNNNNNNTGG	1 cut(s)	676
XspI	CTAG	6 cut(s)	303, 399, 903, 1155, 1251, 1552

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.